Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:29:37 (3999278): wrapper (7.7.26015): starting
09:29:37 (3999278): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 09:29:37] Arguments: --nthreads 8
[2025-10-11 09:29:37] Threads: 8
[2025-10-11 09:29:37] Checking for CVMFS
[2025-10-11 09:29:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 09:29:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 09:29:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 09:29:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 09:29:39] 2.13.2.0 1908877 97737 281364 151585 2 175 21086481 32947201 27629 16776704 0 265617018 99.624 261614008 20759 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 09:29:39] CVMFS is ok
[2025-10-11 09:29:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 09:29:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 09:29:39] Further information can be found at the LHC@home message board.
[2025-10-11 09:29:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 09:29:39] Checking for apptainer binary...
[2025-10-11 09:29:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 09:29:39] Running /usr/bin/apptainer --version
[2025-10-11 09:29:39] apptainer version 1.4.3-1.el9
[2025-10-11 09:29:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 09:29:39] c6-6-8-1.aglt2.org
[2025-10-11 09:29:39] apptainer works
[2025-10-11 09:29:39] Set ATHENA_PROC_NUMBER=8
[2025-10-11 09:29:39] Set ATHENA_CORE_NUMBER=8
[2025-10-11 09:29:39] Starting ATLAS job with PandaID=6832082583
[2025-10-11 09:29:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 14:35:19]  *** The last 200 lines of the pilot log: ***
[2025-10-11 14:35:19] 2025-10-11 18:34:41,897 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 14:35:19] 2025-10-11 18:34:41,912 | INFO     | fitting pss+swap vs Time
[2025-10-11 14:35:19] 2025-10-11 18:34:41,912 | INFO     | sum of square deviations: 8206302182.849015
[2025-10-11 14:35:19] 2025-10-11 18:34:41,919 | INFO     | sum of deviations: 57388798580.805435
[2025-10-11 14:35:19] 2025-10-11 18:34:41,919 | INFO     | mean x: 1760198532.8154361
[2025-10-11 14:35:19] 2025-10-11 18:34:41,919 | INFO     | mean y: 2123490.651006711
[2025-10-11 14:35:19] 2025-10-11 18:34:41,920 | INFO     | -- intersect: -12307401166.276052
[2025-10-11 14:35:19] 2025-10-11 18:34:41,920 | INFO     | intersect: -12307401166.276052
[2025-10-11 14:35:19] 2025-10-11 18:34:41,920 | INFO     | chi2: 2.5568527947394264
[2025-10-11 14:35:19] 2025-10-11 18:34:41,921 | INFO     | sum of square deviations: 7800138165.112627
[2025-10-11 14:35:19] 2025-10-11 18:34:41,927 | INFO     | sum of deviations: 73761836018.62112
[2025-10-11 14:35:19] 2025-10-11 18:34:41,936 | INFO     | mean x: 1760198380.3139932
[2025-10-11 14:35:19] 2025-10-11 18:34:41,936 | INFO     | mean y: 2129551.5802047784
[2025-10-11 14:35:19] 2025-10-11 18:34:41,936 | INFO     | -- intersect: -16643147947.435553
[2025-10-11 14:35:19] 2025-10-11 18:34:41,936 | INFO     | intersect: -16643147947.435553
[2025-10-11 14:35:19] 2025-10-11 18:34:41,937 | INFO     | chi2: 1.7698830260726628
[2025-10-11 14:35:19] 2025-10-11 18:34:41,937 | INFO     | current chi2=1.7698830260726628 (change=30.778845394850553 %)
[2025-10-11 14:35:19] 2025-10-11 18:34:41,938 | INFO     | sum of square deviations: 7407584436.496524
[2025-10-11 14:35:19] 2025-10-11 18:34:41,945 | INFO     | sum of deviations: 71483769788.09023
[2025-10-11 14:35:19] 2025-10-11 18:34:41,945 | INFO     | mean x: 1760198227.8090277
[2025-10-11 14:35:19] 2025-10-11 18:34:41,945 | INFO     | mean y: 2128664.965277778
[2025-10-11 14:35:19] 2025-10-11 18:34:41,945 | INFO     | -- intersect: -16983922047.892359
[2025-10-11 14:35:19] 2025-10-11 18:34:41,945 | INFO     | intersect: -16983922047.892359
[2025-10-11 14:35:19] 2025-10-11 18:34:41,946 | INFO     | chi2: 1.769968344827549
[2025-10-11 14:35:19] 2025-10-11 18:34:41,946 | INFO     | current chi2=1.769968344827549 (change=-0.004820587215612503 %)
[2025-10-11 14:35:19] 2025-10-11 18:34:41,946 | INFO     | right removable region: 287
[2025-10-11 14:35:19] 2025-10-11 18:34:41,947 | INFO     | sum of square deviations: 7800117059.842998
[2025-10-11 14:35:19] 2025-10-11 18:34:41,953 | INFO     | sum of deviations: 11074475943.259388
[2025-10-11 14:35:19] 2025-10-11 18:34:41,953 | INFO     | mean x: 1760198685.3208191
[2025-10-11 14:35:19] 2025-10-11 18:34:41,953 | INFO     | mean y: 2140787.252559727
[2025-10-11 14:35:19] 2025-10-11 18:34:41,954 | INFO     | -- intersect: -2496959911.6713843
[2025-10-11 14:35:19] 2025-10-11 18:34:41,954 | INFO     | intersect: -2496959911.6713843
[2025-10-11 14:35:19] 2025-10-11 18:34:41,954 | INFO     | chi2: 0.9879633616956702
[2025-10-11 14:35:19] 2025-10-11 18:34:41,954 | INFO     | current chi2=0.9879633616956702 (change=61.36017827352648 %)
[2025-10-11 14:35:19] 2025-10-11 18:34:41,955 | INFO     | sum of square deviations: 7407578215.968718
[2025-10-11 14:35:19] 2025-10-11 18:34:41,961 | INFO     | sum of deviations: -973450453.5312538
[2025-10-11 14:35:19] 2025-10-11 18:34:41,962 | INFO     | mean x: 1760198837.8229167
[2025-10-11 14:35:19] 2025-10-11 18:34:41,962 | INFO     | mean y: 2145452.9895833335
[2025-10-11 14:35:19] 2025-10-11 18:34:41,962 | INFO     | -- intersect: 233458077.30857307
[2025-10-11 14:35:19] 2025-10-11 18:34:41,962 | INFO     | intersect: 233458077.30857307
[2025-10-11 14:35:19] 2025-10-11 18:34:41,962 | INFO     | chi2: 0.8869688720504927
[2025-10-11 14:35:19] 2025-10-11 18:34:41,962 | INFO     | current chi2=0.8869688720504927 (change=10.222493420387348 %)
[2025-10-11 14:35:19] 2025-10-11 18:34:41,963 | INFO     | left removable region: 20
[2025-10-11 14:35:19] 2025-10-11 18:34:41,963 | INFO     | sum of square deviations: 5902469030.651704
[2025-10-11 14:35:19] 2025-10-11 18:34:41,969 | INFO     | sum of deviations: 10504629063.898872
[2025-10-11 14:35:19] 2025-10-11 18:34:41,970 | INFO     | mean x: 1760198807.3258426
[2025-10-11 14:35:19] 2025-10-11 18:34:41,970 | INFO     | mean y: 2153290.7827715357
[2025-10-11 14:35:19] 2025-10-11 18:34:41,970 | INFO     | -- intersect: -3130473996.8242984
[2025-10-11 14:35:19] 2025-10-11 18:34:41,970 | INFO     | intersect: -3130473996.8242984
[2025-10-11 14:35:19] 2025-10-11 18:34:41,970 | INFO     | chi2: 0.08138724460908164
[2025-10-11 14:35:19] 2025-10-11 18:34:41,971 | INFO     | -- intersect: -3130473996.8242984
[2025-10-11 14:35:19] 2025-10-11 18:34:41,971 | INFO     | current memory leak: 1.78 B/s (using 267 data points, chi2=0.08)
[2025-10-11 14:35:19] 2025-10-11 18:34:41,972 | INFO     | could have reported an average CPU frequency of 2555 MHz (13 samples)
[2025-10-11 14:35:19] 2025-10-11 18:34:41,972 | INFO     | ..............................
[2025-10-11 14:35:19] 2025-10-11 18:34:41,972 | INFO     | . Timing measurements:
[2025-10-11 14:35:19] 2025-10-11 18:34:41,972 | INFO     | . get job = 0 s
[2025-10-11 14:35:19] 2025-10-11 18:34:41,972 | INFO     | . initial setup = 4 s
[2025-10-11 14:35:19] 2025-10-11 18:34:41,972 | INFO     | . payload setup = 9 s
[2025-10-11 14:35:19] 2025-10-11 18:34:41,972 | INFO     | . stage-in = 0 s
[2025-10-11 14:35:19] 2025-10-11 18:34:41,972 | INFO     | . payload execution = 18173 s
[2025-10-11 14:35:19] 2025-10-11 18:34:41,973 | INFO     | . stage-out = 4 s
[2025-10-11 14:35:19] 2025-10-11 18:34:41,973 | INFO     | . log creation = 0 s
[2025-10-11 14:35:19] 2025-10-11 18:34:41,973 | INFO     | ..............................
[2025-10-11 14:35:19] 2025-10-11 18:34:42,865 | INFO     | 
[2025-10-11 14:35:19] 2025-10-11 18:34:42,865 | INFO     | job summary report
[2025-10-11 14:35:19] 2025-10-11 18:34:42,865 | INFO     | --------------------------------------------------
[2025-10-11 14:35:19] 2025-10-11 18:34:42,865 | INFO     | PanDA job id: 6832082583
[2025-10-11 14:35:19] 2025-10-11 18:34:42,865 | INFO     | task id: 46376905
[2025-10-11 14:35:19] 2025-10-11 18:34:42,866 | INFO     | errors: (none)
[2025-10-11 14:35:19] 2025-10-11 18:34:42,866 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 14:35:19] 2025-10-11 18:34:42,866 | INFO     | pilot state: finished 
[2025-10-11 14:35:19] 2025-10-11 18:34:42,866 | INFO     | transexitcode: 0
[2025-10-11 14:35:19] 2025-10-11 18:34:42,866 | INFO     | exeerrorcode: 0
[2025-10-11 14:35:19] 2025-10-11 18:34:42,866 | INFO     | exeerrordiag: 
[2025-10-11 14:35:19] 2025-10-11 18:34:42,866 | INFO     | exitcode: 0
[2025-10-11 14:35:19] 2025-10-11 18:34:42,866 | INFO     | exitmsg: OK
[2025-10-11 14:35:19] 2025-10-11 18:34:42,866 | INFO     | cpuconsumptiontime: 40623 s
[2025-10-11 14:35:19] 2025-10-11 18:34:42,866 | INFO     | nevents: 400
[2025-10-11 14:35:19] 2025-10-11 18:34:42,866 | INFO     | neventsw: 0
[2025-10-11 14:35:19] 2025-10-11 18:34:42,866 | INFO     | pid: 4038023
[2025-10-11 14:35:19] 2025-10-11 18:34:42,866 | INFO     | pgrp: 4038023
[2025-10-11 14:35:19] 2025-10-11 18:34:42,867 | INFO     | corecount: 8
[2025-10-11 14:35:19] 2025-10-11 18:34:42,867 | INFO     | event service: False
[2025-10-11 14:35:19] 2025-10-11 18:34:42,867 | INFO     | sizes: {0: 2348589, 1: 2348645, 2: 2348872, 3: 2348872, 13: 2348900, 20: 2349218, 24: 2349374, 18187: 2381669, 18193: 2390667, 18195: 2390723, 18227: 2390917}
[2025-10-11 14:35:19] 2025-10-11 18:34:42,867 | INFO     | --------------------------------------------------
[2025-10-11 14:35:19] 2025-10-11 18:34:42,867 | INFO     | 
[2025-10-11 14:35:19] 2025-10-11 18:34:42,867 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-10-11 14:35:19] 2025-10-11 18:34:42,998 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 14:35:19] 2025-10-11 18:34:42,999 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 14:35:19] 2025-10-11 18:34:42,999 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 14:35:19] 2025-10-11 18:34:42,999 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 14:35:19] 2025-10-11 18:34:42,999 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 14:35:19] 2025-10-11 18:34:42,999 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 14:35:19] 2025-10-11 18:34:42,999 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 14:35:19] 2025-10-11 18:34:42,999 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 14:35:19] 2025-10-11 18:34:42,999 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 14:35:19] 2025-10-11 18:34:42,999 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 14:35:19] 2025-10-11 18:34:42,999 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 14:35:19] 2025-10-11 18:34:42,999 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 14:35:19] 2025-10-11 18:34:43,000 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 14:35:19] 2025-10-11 18:34:43,000 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 14:35:19] 2025-10-11 18:34:43,000 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 14:35:19] 2025-10-11 18:34:43,000 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 14:35:19] 2025-10-11 18:34:43,000 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 14:35:19] 2025-10-11 18:34:43,000 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 14:35:19] 2025-10-11 18:34:43,000 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 14:35:19] 2025-10-11 18:34:43,000 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 14:35:19] 2025-10-11 18:34:43,000 | INFO     | job 6832082583 has completed (purged errors)
[2025-10-11 14:35:19] 2025-10-11 18:34:43,000 | INFO     | overall cleanup function is called
[2025-10-11 14:35:19] 2025-10-11 18:34:44,042 | INFO     | --- collectZombieJob: --- 10, [4038023]
[2025-10-11 14:35:19] 2025-10-11 18:34:44,042 | INFO     | zombie collector waiting for pid 4038023
[2025-10-11 14:35:19] 2025-10-11 18:34:44,042 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 14:35:19] 2025-10-11 18:34:44,042 | INFO     | collected zombie processes
[2025-10-11 14:35:19] 2025-10-11 18:34:44,043 | INFO     | will attempt to kill all subprocesses of pid=4038023
[2025-10-11 14:35:19] 2025-10-11 18:34:44,287 | INFO     | PID=4012449 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 14:35:19] 2025-10-11 18:34:44,287 | INFO     | .. there are 32 such processes running
[2025-10-11 14:35:19] 2025-10-11 18:34:45,645 | INFO     | process IDs to be killed: [4038023] (in reverse order)
[2025-10-11 14:35:19] 2025-10-11 18:34:45,886 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 14:35:19] 2025-10-11 18:34:45,887 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 14:35:19] 2025-10-11 18:34:45,903 | INFO     | did not find any defunct processes belonging to 4038023
[2025-10-11 14:35:19] 2025-10-11 18:34:45,919 | INFO     | did not find any defunct processes belonging to 4038023
[2025-10-11 14:35:19] 2025-10-11 18:34:45,920 | INFO     | ready for new job
[2025-10-11 14:35:19] 2025-10-11 18:34:45,920 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 14:35:19] 2025-10-11 18:34:45,922 | INFO     | ***************************************
[2025-10-11 14:35:19] 2025-10-11 18:34:45,923 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-11 14:35:19] 2025-10-11 18:34:45,923 | INFO     | ***************************************
[2025-10-11 14:35:19] 2025-10-11 18:34:45,923 | INFO     | 
[2025-10-11 14:35:19] 2025-10-11 18:34:45,929 | INFO     | architecture information:
[2025-10-11 14:35:19] 2025-10-11 18:34:45,929 | INFO     | executing command: cat /etc/os-release
[2025-10-11 14:35:19] 2025-10-11 18:34:45,953 | INFO     | cat /etc/os-release:
[2025-10-11 14:35:19] NAME="CentOS Linux"
[2025-10-11 14:35:19] VERSION="7 (Core)"
[2025-10-11 14:35:19] ID="centos"
[2025-10-11 14:35:19] ID_LIKE="rhel fedora"
[2025-10-11 14:35:19] VERSION_ID="7"
[2025-10-11 14:35:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 14:35:19] ANSI_COLOR="0;31"
[2025-10-11 14:35:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 14:35:19] HOME_URL="https://www.centos.org/"
[2025-10-11 14:35:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 14:35:19] 
[2025-10-11 14:35:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 14:35:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 14:35:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 14:35:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 14:35:19] 
[2025-10-11 14:35:19] 2025-10-11 18:34:45,953 | INFO     | ***************************************
[2025-10-11 14:35:19] 2025-10-11 18:34:46,458 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-10-11 14:35:19] 2025-10-11 18:34:46,534 | INFO     | sufficient remaining disk space (73689726976 B)
[2025-10-11 14:35:19] 2025-10-11 18:34:46,535 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 14:35:19] 2025-10-11 18:34:46,535 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 14:35:19] 2025-10-11 18:34:46,535 | INFO     | update_server=False
[2025-10-11 14:35:19] 2025-10-11 18:34:46,535 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 14:35:19] 2025-10-11 18:34:46,536 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 14:35:19] 2025-10-11 18:34:46,536 | INFO     | aborting loop
[2025-10-11 14:35:19] 2025-10-11 18:34:46,595 | INFO     | all data control threads have been joined
[2025-10-11 14:35:19] 2025-10-11 18:34:46,696 | INFO     | all job control threads have been joined
[2025-10-11 14:35:19] 2025-10-11 18:34:47,104 | INFO     | all payload control threads have been joined
[2025-10-11 14:35:19] 2025-10-11 18:34:47,108 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 14:35:19] 2025-10-11 18:34:47,446 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 14:35:19] 2025-10-11 18:34:47,541 | INFO     | [job] retrieve thread has finished
[2025-10-11 14:35:19] 2025-10-11 18:34:47,543 | INFO     | [job] job monitor thread has finished
[2025-10-11 14:35:19] 2025-10-11 18:34:47,607 | INFO     | [data] control thread has finished
[2025-10-11 14:35:19] 2025-10-11 18:34:47,706 | INFO     | [job] control thread has finished
[2025-10-11 14:35:19] 2025-10-11 18:34:47,866 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 14:35:19] 2025-10-11 18:34:47,966 | INFO     | [payload] validate_post thread has finished
[2025-10-11 14:35:19] 2025-10-11 18:34:48,112 | INFO     | [payload] control thread has finished
[2025-10-11 14:35:19] 2025-10-11 18:34:48,178 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 14:35:19] 2025-10-11 18:34:48,179 | INFO     | [job] validate thread has finished
[2025-10-11 14:35:19] 2025-10-11 18:34:48,179 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 14:35:19] 2025-10-11 18:34:48,179 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 14:35:19] 2025-10-11 18:34:48,454 | INFO     | [job] queue monitor thread has finished
[2025-10-11 14:35:19] 2025-10-11 18:34:48,517 | INFO     | [data] copytool_in thread has finished
[2025-10-11 14:35:19] 2025-10-11 18:34:48,673 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 14:35:19] 2025-10-11 18:34:48,827 | INFO     | [payload] failed_post thread has finished
[2025-10-11 14:35:19] 2025-10-11 18:34:49,146 | INFO     | [data] copytool_out thread has finished
[2025-10-11 14:35:19] 2025-10-11 18:34:50,700 | INFO     | [monitor] cgroup control has ended
[2025-10-11 14:35:19] 2025-10-11 18:34:52,726 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 14:35:19] 2025-10-11 18:34:54,382 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140200067028800)>', '<ExcThread(monitor, started 140199703062272)>']
[2025-10-11 14:35:19] 2025-10-11 18:34:59,408 | INFO     | all workflow threads have been joined
[2025-10-11 14:35:19] 2025-10-11 18:34:59,408 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 14:35:19] 2025-10-11 18:34:59,409 | INFO     | traces error code: 0
[2025-10-11 14:35:19] 2025-10-11 18:34:59,409 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 14:35:19] 2025-10-11 18:35:18,283 | INFO     | PID=4012449 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 14:35:19] 2025-10-11 18:35:18,288 | INFO     | .. there are 32 such processes running
[2025-10-11 14:35:19] 2025-10-11 18:35:18,291 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 14:35:19] 2025-10-11 18:35:18,291 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 14:35:19] 2025-10-11 18:35:18,291 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 14:35:19] 2025-10-11 18:35:18,291 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 14:35:19] 2025-10-11 18:35:18,291 | INFO     | [monitor] control thread has ended
[2025-10-11 14:35:19] 2025-10-11 18:35:18,719 [wrapper] ==== pilot stdout END ====
[2025-10-11 14:35:19] 2025-10-11 18:35:18,790 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 14:35:19] 2025-10-11 18:35:18,803 [wrapper] pilotpid: 4012449
[2025-10-11 14:35:19] 2025-10-11 18:35:18,828 [wrapper] Pilot exit status: 0
[2025-10-11 14:35:19] 2025-10-11 18:35:18,927 [wrapper] pandaids: 6832082583
[2025-10-11 14:35:19] 2025-10-11 18:35:19,175 [wrapper] cleanup supervisor_pilot  701170 4012450
[2025-10-11 14:35:19] 2025-10-11 18:35:19,187 [wrapper] Test setup, not cleaning
[2025-10-11 14:35:19] 2025-10-11 18:35:19,218 [wrapper] apfmon messages muted
[2025-10-11 14:35:19] 2025-10-11 18:35:19,237 [wrapper] ==== wrapper stdout END ====
[2025-10-11 14:35:19] 2025-10-11 18:35:19,265 [wrapper] ==== wrapper stderr END ====
[2025-10-11 14:35:19]  *** Error codes and diagnostics ***
[2025-10-11 14:35:19]     "exeErrorCode": 0,
[2025-10-11 14:35:19]     "exeErrorDiag": "",
[2025-10-11 14:35:19]     "pilotErrorCode": 0,
[2025-10-11 14:35:19]     "pilotErrorDiag": "",
[2025-10-11 14:35:19]  *** Listing of results directory ***
[2025-10-11 14:35:19] total 386996
[2025-10-11 14:35:19] -rw-r--r-- 1 boincer umatlas    552446 Oct  5 18:48 pilot3.tar.gz
[2025-10-11 14:35:19] -rw-r--r-- 1 boincer umatlas      5112 Oct  5 18:51 queuedata.json
[2025-10-11 14:35:19] -rwx------ 1 boincer umatlas     36292 Oct  5 18:52 runpilot2-wrapper.sh
[2025-10-11 14:35:19] -rw-r--r-- 1 boincer umatlas       100 Oct 11 09:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 14:35:19] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 09:29 run_atlas
[2025-10-11 14:35:19] -rw-r--r-- 1 boincer umatlas       105 Oct 11 09:29 job.xml
[2025-10-11 14:35:19] -rw-r--r-- 2 boincer umatlas 213034788 Oct 11 09:29 EVNT.46376901._003639.pool.root.1
[2025-10-11 14:35:19] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 09:29 start_atlas.sh
[2025-10-11 14:35:19] drwxrwx--x 2 boincer umatlas      4096 Oct 11 09:29 shared
[2025-10-11 14:35:19] -rw-r--r-- 2 boincer umatlas    565604 Oct 11 09:29 input.tar.gz
[2025-10-11 14:35:19] -rw-r--r-- 1 boincer umatlas         0 Oct 11 09:29 boinc_lockfile
[2025-10-11 14:35:19] -rw-r--r-- 1 boincer umatlas      2519 Oct 11 09:29 pandaJob.out
[2025-10-11 14:35:19] -rw------- 1 boincer umatlas    975520 Oct 11 09:30 agis_schedconf.cvmfs.json
[2025-10-11 14:35:19] drwx------ 4 boincer umatlas      4096 Oct 11 09:30 pilot3
[2025-10-11 14:35:19] -rw-r--r-- 1 boincer umatlas      6858 Oct 11 14:28 init_data.xml
[2025-10-11 14:35:19] -rw------- 1 boincer umatlas 173708988 Oct 11 14:32 HITS.46376905._098554.pool.root.1
[2025-10-11 14:35:19] -rw-r--r-- 1 boincer umatlas       530 Oct 11 14:33 boinc_task_state.xml
[2025-10-11 14:35:19] -rw------- 1 boincer umatlas      1043 Oct 11 14:33 memory_monitor_summary.json
[2025-10-11 14:35:19] -rw------- 1 boincer umatlas   1560580 Oct 11 14:34 agis_ddmendpoints.agis.ALL.json
[2025-10-11 14:35:19] -rw------- 1 boincer umatlas    512101 Oct 11 14:34 log.46376905._098554.job.log.tgz.1
[2025-10-11 14:35:19] -rw------- 1 boincer umatlas      7827 Oct 11 14:34 heartbeat.json
[2025-10-11 14:35:19] -rw-r--r-- 1 boincer umatlas        28 Oct 11 14:35 wrapper_checkpoint.txt
[2025-10-11 14:35:19] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 14:35 boinc_mmap_file
[2025-10-11 14:35:19] -rw------- 1 boincer umatlas        95 Oct 11 14:35 pilot_heartbeat.json
[2025-10-11 14:35:19] -rw------- 1 boincer umatlas       823 Oct 11 14:35 pilotlog.txt
[2025-10-11 14:35:19] -rw------- 1 boincer umatlas   2310237 Oct 11 14:35 log.46376905._098554.job.log.1
[2025-10-11 14:35:19] -rw------- 1 boincer umatlas       357 Oct 11 14:35 output.list
[2025-10-11 14:35:19] -rw-r--r-- 1 boincer umatlas       620 Oct 11 14:35 runtime_log
[2025-10-11 14:35:19] -rw------- 1 boincer umatlas   2846720 Oct 11 14:35 result.tar.gz
[2025-10-11 14:35:19] -rw-r--r-- 1 boincer umatlas      8704 Oct 11 14:35 runtime_log.err
[2025-10-11 14:35:19] -rw------- 1 boincer umatlas       655 Oct 11 14:35 1CsMDmslmP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmmWRNDmTP6GYn.diag
[2025-10-11 14:35:19] -rw-r--r-- 1 boincer umatlas     21160 Oct 11 14:35 stderr.txt
[2025-10-11 14:35:19] HITS file was successfully produced:
[2025-10-11 14:35:19] -rw------- 1 boincer umatlas 173708988 Oct 11 14:32 shared/HITS.pool.root.1
[2025-10-11 14:35:19]  *** Contents of shared directory: ***
[2025-10-11 14:35:19] total 381040
[2025-10-11 14:35:19] -rw-r--r-- 2 boincer umatlas 213034788 Oct 11 09:29 ATLAS.root_0
[2025-10-11 14:35:19] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 09:29 start_atlas.sh
[2025-10-11 14:35:19] -rw-r--r-- 2 boincer umatlas    565604 Oct 11 09:29 input.tar.gz
[2025-10-11 14:35:19] -rw------- 1 boincer umatlas 173708988 Oct 11 14:32 HITS.pool.root.1
[2025-10-11 14:35:19] -rw------- 1 boincer umatlas   2846720 Oct 11 14:35 result.tar.gz
14:35:21 (3999278): run_atlas exited; CPU time 41672.652436
14:35:21 (3999278): called boinc_finish(0)

</stderr_txt>
]]>

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