Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:12:50 (1120599): wrapper (7.7.26015): starting
16:12:50 (1120599): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 16:12:50] Arguments: --nthreads 8
[2025-10-11 16:12:50] Threads: 8
[2025-10-11 16:12:50] Checking for CVMFS
[2025-10-11 16:12:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 16:12:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 16:12:52] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 16:12:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 16:12:53] 2.13.2.0 128560 115000 198444 151594 1 292 28479356 39288833 8173 16776704 1 71275612 99.558 80398008 35349 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 16:12:53] CVMFS is ok
[2025-10-11 16:12:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 16:12:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 16:12:53] Further information can be found at the LHC@home message board.
[2025-10-11 16:12:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 16:12:53] Checking for apptainer binary...
[2025-10-11 16:12:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 16:12:53] Running /usr/bin/apptainer --version
[2025-10-11 16:12:53] apptainer version 1.4.3-1.el9
[2025-10-11 16:12:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 16:12:54] c-211-5.aglt2.org
[2025-10-11 16:12:54] apptainer works
[2025-10-11 16:12:54] Set ATHENA_PROC_NUMBER=8
[2025-10-11 16:12:54] Set ATHENA_CORE_NUMBER=8
[2025-10-11 16:12:54] Starting ATLAS job with PandaID=6838199486
[2025-10-11 16:12:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 21:03:52]  *** The last 200 lines of the pilot log: ***
[2025-10-11 21:03:52] 2025-10-12 01:03:05,238 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 21:03:52] 2025-10-12 01:03:05,238 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 21:03:52] 2025-10-12 01:03:05,248 | INFO     | fitting pss+swap vs Time
[2025-10-11 21:03:52] 2025-10-12 01:03:05,249 | INFO     | sum of square deviations: 6880314496.099669
[2025-10-11 21:03:52] 2025-10-12 01:03:05,255 | INFO     | sum of deviations: -14008551123.619217
[2025-10-11 21:03:52] 2025-10-12 01:03:05,255 | INFO     | mean x: 1760222366.4768684
[2025-10-11 21:03:52] 2025-10-12 01:03:05,255 | INFO     | mean y: 2522651.75088968
[2025-10-11 21:03:52] 2025-10-12 01:03:05,255 | INFO     | -- intersect: 3586394438.9646134
[2025-10-11 21:03:52] 2025-10-12 01:03:05,256 | INFO     | intersect: 3586394438.9646134
[2025-10-11 21:03:52] 2025-10-12 01:03:05,256 | INFO     | chi2: 2.6151641487896073
[2025-10-11 21:03:52] 2025-10-12 01:03:05,257 | INFO     | sum of square deviations: 6519534752.822458
[2025-10-11 21:03:52] 2025-10-12 01:03:05,263 | INFO     | sum of deviations: 4148443136.518103
[2025-10-11 21:03:52] 2025-10-12 01:03:05,263 | INFO     | mean x: 1760222213.9746377
[2025-10-11 21:03:52] 2025-10-12 01:03:05,263 | INFO     | mean y: 2530219.9311594204
[2025-10-11 21:03:52] 2025-10-12 01:03:05,264 | INFO     | -- intersect: -1117516231.1056268
[2025-10-11 21:03:52] 2025-10-12 01:03:05,264 | INFO     | intersect: -1117516231.1056268
[2025-10-11 21:03:52] 2025-10-12 01:03:05,264 | INFO     | chi2: 1.9396229113872385
[2025-10-11 21:03:52] 2025-10-12 01:03:05,264 | INFO     | current chi2=1.9396229113872385 (change=25.831695410593397 %)
[2025-10-11 21:03:52] 2025-10-12 01:03:05,265 | INFO     | sum of square deviations: 6171542065.343161
[2025-10-11 21:03:52] 2025-10-12 01:03:05,271 | INFO     | sum of deviations: 4399474980.457545
[2025-10-11 21:03:52] 2025-10-12 01:03:05,271 | INFO     | mean x: 1760222061.4612546
[2025-10-11 21:03:52] 2025-10-12 01:03:05,271 | INFO     | mean y: 2530329.9483394832
[2025-10-11 21:03:52] 2025-10-12 01:03:05,272 | INFO     | -- intersect: -1252269983.7261968
[2025-10-11 21:03:52] 2025-10-12 01:03:05,272 | INFO     | intersect: -1252269983.7261968
[2025-10-11 21:03:52] 2025-10-12 01:03:05,272 | INFO     | chi2: 1.9401317207934405
[2025-10-11 21:03:52] 2025-10-12 01:03:05,272 | INFO     | current chi2=1.9401317207934405 (change=-0.026232387914932886 %)
[2025-10-11 21:03:52] 2025-10-12 01:03:05,273 | INFO     | right removable region: 270
[2025-10-11 21:03:52] 2025-10-12 01:03:05,273 | INFO     | sum of square deviations: 6519504069.941983
[2025-10-11 21:03:52] 2025-10-12 01:03:05,279 | INFO     | sum of deviations: -65536751391.15941
[2025-10-11 21:03:52] 2025-10-12 01:03:05,280 | INFO     | mean x: 1760222518.9855072
[2025-10-11 21:03:52] 2025-10-12 01:03:05,280 | INFO     | mean y: 2544279.4601449277
[2025-10-11 21:03:52] 2025-10-12 01:03:05,280 | INFO     | -- intersect: 17697029071.90543
[2025-10-11 21:03:52] 2025-10-12 01:03:05,280 | INFO     | intersect: 17697029071.90543
[2025-10-11 21:03:52] 2025-10-12 01:03:05,281 | INFO     | chi2: 0.8361004364434275
[2025-10-11 21:03:52] 2025-10-12 01:03:05,281 | INFO     | current chi2=0.8361004364434275 (change=68.02875885131704 %)
[2025-10-11 21:03:52] 2025-10-12 01:03:05,281 | INFO     | sum of square deviations: 6171531093.741668
[2025-10-11 21:03:52] 2025-10-12 01:03:05,287 | INFO     | sum of deviations: -69509290316.13268
[2025-10-11 21:03:52] 2025-10-12 01:03:05,288 | INFO     | mean x: 1760222671.4944649
[2025-10-11 21:03:52] 2025-10-12 01:03:05,288 | INFO     | mean y: 2546035.9114391143
[2025-10-11 21:03:52] 2025-10-12 01:03:05,288 | INFO     | -- intersect: 19827744489.180202
[2025-10-11 21:03:52] 2025-10-12 01:03:05,288 | INFO     | intersect: 19827744489.180202
[2025-10-11 21:03:52] 2025-10-12 01:03:05,289 | INFO     | chi2: 0.8088186775364148
[2025-10-11 21:03:52] 2025-10-12 01:03:05,289 | INFO     | current chi2=0.8088186775364148 (change=3.262976278670873 %)
[2025-10-11 21:03:52] 2025-10-12 01:03:05,289 | INFO     | left removable region: 20
[2025-10-11 21:03:52] 2025-10-12 01:03:05,289 | INFO     | sum of square deviations: 4845035600.964001
[2025-10-11 21:03:52] 2025-10-12 01:03:05,295 | INFO     | sum of deviations: -40666921486.616005
[2025-10-11 21:03:52] 2025-10-12 01:03:05,296 | INFO     | mean x: 1760222640.988
[2025-10-11 21:03:52] 2025-10-12 01:03:05,296 | INFO     | mean y: 2550513.128
[2025-10-11 21:03:52] 2025-10-12 01:03:05,296 | INFO     | -- intersect: 14777021091.998518
[2025-10-11 21:03:52] 2025-10-12 01:03:05,296 | INFO     | intersect: 14777021091.998518
[2025-10-11 21:03:52] 2025-10-12 01:03:05,296 | INFO     | chi2: 0.10929636291760426
[2025-10-11 21:03:52] 2025-10-12 01:03:05,297 | INFO     | -- intersect: 14777021091.998518
[2025-10-11 21:03:52] 2025-10-12 01:03:05,297 | INFO     | current memory leak: -8.39 B/s (using 250 data points, chi2=0.11)
[2025-10-11 21:03:52] 2025-10-12 01:03:05,297 | INFO     | could have reported an average CPU frequency of 2600 MHz (13 samples)
[2025-10-11 21:03:52] 2025-10-12 01:03:05,298 | INFO     | ..............................
[2025-10-11 21:03:52] 2025-10-12 01:03:05,298 | INFO     | . Timing measurements:
[2025-10-11 21:03:52] 2025-10-12 01:03:05,298 | INFO     | . get job = 0 s
[2025-10-11 21:03:52] 2025-10-12 01:03:05,298 | INFO     | . initial setup = 9 s
[2025-10-11 21:03:52] 2025-10-12 01:03:05,302 | INFO     | . payload setup = 44 s
[2025-10-11 21:03:52] 2025-10-12 01:03:05,302 | INFO     | . stage-in = 0 s
[2025-10-11 21:03:52] 2025-10-12 01:03:05,302 | INFO     | . payload execution = 17154 s
[2025-10-11 21:03:52] 2025-10-12 01:03:05,303 | INFO     | . stage-out = 4 s
[2025-10-11 21:03:52] 2025-10-12 01:03:05,303 | INFO     | . log creation = 0 s
[2025-10-11 21:03:52] 2025-10-12 01:03:05,303 | INFO     | ..............................
[2025-10-11 21:03:52] 2025-10-12 01:03:05,540 | INFO     | time since job start (17330s) is within the limit (172800.0s)
[2025-10-11 21:03:52] 2025-10-12 01:03:05,718 | INFO     | 
[2025-10-11 21:03:52] 2025-10-12 01:03:05,718 | INFO     | job summary report
[2025-10-11 21:03:52] 2025-10-12 01:03:05,718 | INFO     | --------------------------------------------------
[2025-10-11 21:03:52] 2025-10-12 01:03:05,719 | INFO     | PanDA job id: 6838199486
[2025-10-11 21:03:52] 2025-10-12 01:03:05,719 | INFO     | task id: 46676269
[2025-10-11 21:03:52] 2025-10-12 01:03:05,719 | INFO     | errors: (none)
[2025-10-11 21:03:52] 2025-10-12 01:03:05,719 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 21:03:52] 2025-10-12 01:03:05,719 | INFO     | pilot state: finished 
[2025-10-11 21:03:52] 2025-10-12 01:03:05,719 | INFO     | transexitcode: 0
[2025-10-11 21:03:52] 2025-10-12 01:03:05,719 | INFO     | exeerrorcode: 0
[2025-10-11 21:03:52] 2025-10-12 01:03:05,719 | INFO     | exeerrordiag: 
[2025-10-11 21:03:52] 2025-10-12 01:03:05,719 | INFO     | exitcode: 0
[2025-10-11 21:03:52] 2025-10-12 01:03:05,719 | INFO     | exitmsg: OK
[2025-10-11 21:03:52] 2025-10-12 01:03:05,720 | INFO     | cpuconsumptiontime: 51404 s
[2025-10-11 21:03:52] 2025-10-12 01:03:05,720 | INFO     | nevents: 400
[2025-10-11 21:03:52] 2025-10-12 01:03:05,720 | INFO     | neventsw: 0
[2025-10-11 21:03:52] 2025-10-12 01:03:05,720 | INFO     | pid: 1134059
[2025-10-11 21:03:52] 2025-10-12 01:03:05,720 | INFO     | pgrp: 1134059
[2025-10-11 21:03:52] 2025-10-12 01:03:05,720 | INFO     | corecount: 8
[2025-10-11 21:03:52] 2025-10-12 01:03:05,720 | INFO     | event service: False
[2025-10-11 21:03:52] 2025-10-12 01:03:05,720 | INFO     | sizes: {0: 2348630, 1: 2348714, 2: 2348885, 3: 2348913, 14: 2348941, 25: 2348969, 36: 2349125, 41: 2349415, 47: 2349443, 17203: 2381658, 17208: 2390656, 17210: 239
[2025-10-11 21:03:52] 2025-10-12 01:03:05,720 | INFO     | --------------------------------------------------
[2025-10-11 21:03:52] 2025-10-12 01:03:05,720 | INFO     | 
[2025-10-11 21:03:52] 2025-10-12 01:03:05,721 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-11 21:03:52] 2025-10-12 01:03:05,773 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 21:03:52] 2025-10-12 01:03:05,774 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 21:03:52] 2025-10-12 01:03:05,774 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 21:03:52] 2025-10-12 01:03:05,774 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 21:03:52] 2025-10-12 01:03:05,774 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 21:03:52] 2025-10-12 01:03:05,774 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 21:03:52] 2025-10-12 01:03:05,774 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 21:03:52] 2025-10-12 01:03:05,774 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 21:03:52] 2025-10-12 01:03:05,775 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 21:03:52] 2025-10-12 01:03:05,775 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 21:03:52] 2025-10-12 01:03:05,775 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 21:03:52] 2025-10-12 01:03:05,775 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 21:03:52] 2025-10-12 01:03:05,775 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 21:03:52] 2025-10-12 01:03:05,775 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 21:03:52] 2025-10-12 01:03:05,775 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 21:03:52] 2025-10-12 01:03:05,775 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 21:03:52] 2025-10-12 01:03:05,775 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 21:03:52] 2025-10-12 01:03:05,776 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 21:03:52] 2025-10-12 01:03:05,776 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 21:03:52] 2025-10-12 01:03:05,776 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 21:03:52] 2025-10-12 01:03:05,776 | INFO     | job 6838199486 has completed (purged errors)
[2025-10-11 21:03:52] 2025-10-12 01:03:05,776 | INFO     | overall cleanup function is called
[2025-10-11 21:03:52] 2025-10-12 01:03:06,789 | INFO     | --- collectZombieJob: --- 10, [1134059]
[2025-10-11 21:03:52] 2025-10-12 01:03:06,789 | INFO     | zombie collector waiting for pid 1134059
[2025-10-11 21:03:52] 2025-10-12 01:03:06,789 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 21:03:52] 2025-10-12 01:03:06,790 | INFO     | collected zombie processes
[2025-10-11 21:03:52] 2025-10-12 01:03:06,790 | INFO     | will attempt to kill all subprocesses of pid=1134059
[2025-10-11 21:03:52] 2025-10-12 01:03:07,586 | INFO     | process IDs to be killed: [1134059] (in reverse order)
[2025-10-11 21:03:52] 2025-10-12 01:03:07,772 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 21:03:52] 2025-10-12 01:03:07,772 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 21:03:52] 2025-10-12 01:03:07,790 | INFO     | did not find any defunct processes belonging to 1134059
[2025-10-11 21:03:52] 2025-10-12 01:03:07,804 | INFO     | did not find any defunct processes belonging to 1134059
[2025-10-11 21:03:52] 2025-10-12 01:03:07,809 | INFO     | ready for new job
[2025-10-11 21:03:52] 2025-10-12 01:03:07,810 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 21:03:52] 2025-10-12 01:03:07,812 | INFO     | ***************************************
[2025-10-11 21:03:52] 2025-10-12 01:03:07,813 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 21:03:52] 2025-10-12 01:03:07,813 | INFO     | ***************************************
[2025-10-11 21:03:52] 2025-10-12 01:03:07,813 | INFO     | 
[2025-10-11 21:03:52] 2025-10-12 01:03:07,819 | INFO     | architecture information:
[2025-10-11 21:03:52] 2025-10-12 01:03:07,823 | INFO     | executing command: cat /etc/os-release
[2025-10-11 21:03:52] 2025-10-12 01:03:07,874 | INFO     | cat /etc/os-release:
[2025-10-11 21:03:52] NAME="CentOS Linux"
[2025-10-11 21:03:52] VERSION="7 (Core)"
[2025-10-11 21:03:52] ID="centos"
[2025-10-11 21:03:52] ID_LIKE="rhel fedora"
[2025-10-11 21:03:52] VERSION_ID="7"
[2025-10-11 21:03:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 21:03:52] ANSI_COLOR="0;31"
[2025-10-11 21:03:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 21:03:52] HOME_URL="https://www.centos.org/"
[2025-10-11 21:03:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 21:03:52] 
[2025-10-11 21:03:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 21:03:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 21:03:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 21:03:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 21:03:52] 
[2025-10-11 21:03:52] 2025-10-12 01:03:07,875 | INFO     | ***************************************
[2025-10-11 21:03:52] 2025-10-12 01:03:08,378 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-11 21:03:52] 2025-10-12 01:03:08,441 | INFO     | sufficient remaining disk space (52404682752 B)
[2025-10-11 21:03:52] 2025-10-12 01:03:08,442 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 21:03:52] 2025-10-12 01:03:08,442 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 21:03:52] 2025-10-12 01:03:08,442 | INFO     | update_server=False
[2025-10-11 21:03:52] 2025-10-12 01:03:08,442 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 21:03:52] 2025-10-12 01:03:08,442 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 21:03:52] 2025-10-12 01:03:08,443 | INFO     | aborting loop
[2025-10-11 21:03:52] 2025-10-12 01:03:08,601 | INFO     | all payload control threads have been joined
[2025-10-11 21:03:52] 2025-10-12 01:03:08,626 | INFO     | all data control threads have been joined
[2025-10-11 21:03:52] 2025-10-12 01:03:09,110 | INFO     | all job control threads have been joined
[2025-10-11 21:03:52] 2025-10-12 01:03:09,448 | INFO     | [job] retrieve thread has finished
[2025-10-11 21:03:52] 2025-10-12 01:03:09,449 | INFO     | [job] job monitor thread has finished
[2025-10-11 21:03:52] 2025-10-12 01:03:09,452 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 21:03:52] 2025-10-12 01:03:09,464 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 21:03:52] 2025-10-12 01:03:09,607 | INFO     | [payload] control thread has finished
[2025-10-11 21:03:52] 2025-10-12 01:03:09,632 | INFO     | [data] control thread has finished
[2025-10-11 21:03:52] 2025-10-12 01:03:09,686 | INFO     | [payload] validate_post thread has finished
[2025-10-11 21:03:52] 2025-10-12 01:03:10,115 | INFO     | [job] control thread has finished
[2025-10-11 21:03:52] 2025-10-12 01:03:10,218 | INFO     | [data] copytool_in thread has finished
[2025-10-11 21:03:52] 2025-10-12 01:03:10,221 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 21:03:52] 2025-10-12 01:03:10,412 | INFO     | [payload] failed_post thread has finished
[2025-10-11 21:03:52] 2025-10-12 01:03:10,631 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 21:03:52] 2025-10-12 01:03:10,744 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 21:03:52] 2025-10-12 01:03:10,756 | INFO     | [job] validate thread has finished
[2025-10-11 21:03:52] 2025-10-12 01:03:10,766 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 21:03:52] 2025-10-12 01:03:11,387 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 21:03:52] 2025-10-12 01:03:11,475 | INFO     | [data] copytool_out thread has finished
[2025-10-11 21:03:52] 2025-10-12 01:03:11,637 | INFO     | [job] queue monitor thread has finished
[2025-10-11 21:03:52] 2025-10-12 01:03:15,396 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 21:03:52] 2025-10-12 01:03:39,226 | INFO     | PID=1124397 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 21:03:52] 2025-10-12 01:03:39,227 | INFO     | .. there are 7 such processes running
[2025-10-11 21:03:52] 2025-10-12 01:03:39,228 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 21:03:52] 2025-10-12 01:03:39,229 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 21:03:52] 2025-10-12 01:03:39,229 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 21:03:52] 2025-10-12 01:03:45,377 | INFO     | [monitor] cgroup control has ended
[2025-10-11 21:03:52] 2025-10-12 01:03:46,013 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140591540971328)>', '<ExcThread(monitor, started 140590889023232)>']
[2025-10-11 21:03:52] 2025-10-12 01:03:46,325 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 21:03:52] 2025-10-12 01:03:46,325 | INFO     | [monitor] control thread has ended
[2025-10-11 21:03:52] 2025-10-12 01:03:51,039 | INFO     | all workflow threads have been joined
[2025-10-11 21:03:52] 2025-10-12 01:03:51,039 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 21:03:52] 2025-10-12 01:03:51,040 | INFO     | traces error code: 0
[2025-10-11 21:03:52] 2025-10-12 01:03:51,040 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 21:03:52] 2025-10-12 01:03:51,362 [wrapper] ==== pilot stdout END ====
[2025-10-11 21:03:52] 2025-10-12 01:03:51,378 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 21:03:52] 2025-10-12 01:03:51,380 [wrapper] pilotpid: 1124397
[2025-10-11 21:03:52] 2025-10-12 01:03:51,383 [wrapper] Pilot exit status: 0
[2025-10-11 21:03:52] 2025-10-12 01:03:51,440 [wrapper] pandaids: 6838199486
[2025-10-11 21:03:52] 2025-10-12 01:03:51,753 [wrapper] cleanup supervisor_pilot 1557763 1124398
[2025-10-11 21:03:52] 2025-10-12 01:03:51,819 [wrapper] Test setup, not cleaning
[2025-10-11 21:03:52] 2025-10-12 01:03:52,078 [wrapper] apfmon messages muted
[2025-10-11 21:03:52] 2025-10-12 01:03:52,095 [wrapper] ==== wrapper stdout END ====
[2025-10-11 21:03:52] 2025-10-12 01:03:52,098 [wrapper] ==== wrapper stderr END ====
[2025-10-11 21:03:52]  *** Error codes and diagnostics ***
[2025-10-11 21:03:52]     "exeErrorCode": 0,
[2025-10-11 21:03:52]     "exeErrorDiag": "",
[2025-10-11 21:03:52]     "pilotErrorCode": 0,
[2025-10-11 21:03:52]     "pilotErrorDiag": "",
[2025-10-11 21:03:52]  *** Listing of results directory ***
[2025-10-11 21:03:52] total 407996
[2025-10-11 21:03:52] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 03:02 pilot3.tar.gz
[2025-10-11 21:03:52] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 03:37 queuedata.json
[2025-10-11 21:03:52] -rwx------. 1 boincer umatlas     36292 Oct 11 03:37 runpilot2-wrapper.sh
[2025-10-11 21:03:52] -rw-r--r--. 1 boincer umatlas       100 Oct 11 16:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 21:03:52] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 16:12 run_atlas
[2025-10-11 21:03:52] -rw-r--r--. 1 boincer umatlas       105 Oct 11 16:12 job.xml
[2025-10-11 21:03:52] -rw-r--r--. 2 boincer umatlas 219516249 Oct 11 16:12 EVNT.46676267._002150.pool.root.1
[2025-10-11 21:03:52] -rw-r--r--. 2 boincer umatlas    569682 Oct 11 16:12 input.tar.gz
[2025-10-11 21:03:52] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 16:12 start_atlas.sh
[2025-10-11 21:03:52] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 16:12 shared
[2025-10-11 21:03:52] -rw-r--r--. 1 boincer umatlas         0 Oct 11 16:12 boinc_lockfile
[2025-10-11 21:03:52] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 16:12 pandaJob.out
[2025-10-11 21:03:52] -rw-------. 1 boincer umatlas    975512 Oct 11 16:14 agis_schedconf.cvmfs.json
[2025-10-11 21:03:52] drwx------. 5 boincer umatlas      4096 Oct 11 16:14 pilot3
[2025-10-11 21:03:52] -rw-r--r--. 1 boincer umatlas      6659 Oct 11 21:00 init_data.xml
[2025-10-11 21:03:52] -rw-------. 1 boincer umatlas 188776227 Oct 11 21:01 HITS.46676269._053566.pool.root.1
[2025-10-11 21:03:52] -rw-r--r--. 1 boincer umatlas       531 Oct 11 21:01 boinc_task_state.xml
[2025-10-11 21:03:52] -rw-------. 1 boincer umatlas      1043 Oct 11 21:02 memory_monitor_summary.json
[2025-10-11 21:03:52] -rw-------. 1 boincer umatlas   1560580 Oct 11 21:02 agis_ddmendpoints.agis.ALL.json
[2025-10-11 21:03:52] -rw-------. 1 boincer umatlas    491972 Oct 11 21:02 log.46676269._053566.job.log.tgz.1
[2025-10-11 21:03:52] -rw-------. 1 boincer umatlas      7825 Oct 11 21:03 heartbeat.json
[2025-10-11 21:03:52] -rw-------. 1 boincer umatlas        95 Oct 11 21:03 pilot_heartbeat.json
[2025-10-11 21:03:52] -rw-------. 1 boincer umatlas      4823 Oct 11 21:03 pilotlog.txt
[2025-10-11 21:03:52] -rw-r--r--. 1 boincer umatlas        28 Oct 11 21:03 wrapper_checkpoint.txt
[2025-10-11 21:03:52] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 21:03 boinc_mmap_file
[2025-10-11 21:03:52] -rw-------. 1 boincer umatlas   2302643 Oct 11 21:03 log.46676269._053566.job.log.1
[2025-10-11 21:03:52] -rw-------. 1 boincer umatlas       357 Oct 11 21:03 output.list
[2025-10-11 21:03:52] -rw-r--r--. 1 boincer umatlas       620 Oct 11 21:03 runtime_log
[2025-10-11 21:03:52] -rw-------. 1 boincer umatlas   2816000 Oct 11 21:03 result.tar.gz
[2025-10-11 21:03:52] -rw-r--r--. 1 boincer umatlas      8699 Oct 11 21:03 runtime_log.err
[2025-10-11 21:03:52] -rw-------. 1 boincer umatlas       656 Oct 11 21:03 hR2LDmgLjR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7lfNDmVuU6Wm.diag
[2025-10-11 21:03:52] -rw-r--r--. 1 boincer umatlas     20987 Oct 11 21:03 stderr.txt
[2025-10-11 21:03:52] HITS file was successfully produced:
[2025-10-11 21:03:52] -rw-------. 1 boincer umatlas 188776227 Oct 11 21:01 shared/HITS.pool.root.1
[2025-10-11 21:03:52]  *** Contents of shared directory: ***
[2025-10-11 21:03:52] total 402056
[2025-10-11 21:03:52] -rw-r--r--. 2 boincer umatlas 219516249 Oct 11 16:12 ATLAS.root_0
[2025-10-11 21:03:52] -rw-r--r--. 2 boincer umatlas    569682 Oct 11 16:12 input.tar.gz
[2025-10-11 21:03:52] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 16:12 start_atlas.sh
[2025-10-11 21:03:52] -rw-------. 1 boincer umatlas 188776227 Oct 11 21:01 HITS.pool.root.1
[2025-10-11 21:03:52] -rw-------. 1 boincer umatlas   2816000 Oct 11 21:03 result.tar.gz
21:03:54 (1120599): run_atlas exited; CPU time 51783.247829
21:03:54 (1120599): called boinc_finish(0)

</stderr_txt>
]]>

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