Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:15:33 (562862): wrapper (7.7.26015): starting
08:15:33 (562862): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 08:15:33] Arguments: --nthreads 3
[2025-10-13 08:15:33] Threads: 3
[2025-10-13 08:15:33] Checking for CVMFS
[2025-10-13 08:15:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 08:17:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 08:17:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 08:17:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 08:17:05] 2.11.5.0 563080 1 30780 151641 2 1 13605716 15728641 0 130560 0 0 0.000 1293 61 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-13 08:17:05] CVMFS is ok
[2025-10-13 08:17:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 08:17:05] Checking for apptainer binary...
[2025-10-13 08:17:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 08:17:05] Running /usr/bin/apptainer --version
[2025-10-13 08:17:05] apptainer version 1.3.4-1.el9
[2025-10-13 08:17:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 08:17:05] testio003
[2025-10-13 08:17:05] apptainer works
[2025-10-13 08:17:05] Set ATHENA_PROC_NUMBER=3
[2025-10-13 08:17:05] Set ATHENA_CORE_NUMBER=3
[2025-10-13 08:17:05] Starting ATLAS job with PandaID=6838200202
[2025-10-13 08:17:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 10:13:52]  *** The last 200 lines of the pilot log: ***
[2025-10-13 10:13:52] 2025-10-13 01:13:29,107 | INFO     | monitor loop #532: job 0:6838200202 is in state 'finished'
[2025-10-13 10:13:52] 2025-10-13 01:13:29,108 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 10:13:52] 2025-10-13 01:13:29,911 | INFO     | time since job start (6894s) is within the limit (172800.0s)
[2025-10-13 10:13:52] 2025-10-13 01:13:30,163 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 10:13:52] 2025-10-13 01:13:30,164 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 3517.05275
[2025-10-13 10:13:52] 2025-10-13 01:13:30,165 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6838200202/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 10:13:52] 2025-10-13 01:13:30,165 | INFO     | extracted standard info from prmon json
[2025-10-13 10:13:52] 2025-10-13 01:13:30,165 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 10:13:52] 2025-10-13 01:13:30,165 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 10:13:52] 2025-10-13 01:13:30,165 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 10:13:52] 2025-10-13 01:13:30,165 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 10:13:52] 2025-10-13 01:13:30,166 | INFO     | fitting pss+swap vs Time
[2025-10-13 10:13:52] 2025-10-13 01:13:30,166 | INFO     | sum of square deviations: 435610028.0
[2025-10-13 10:13:52] 2025-10-13 01:13:30,167 | INFO     | sum of deviations: -17990621511.5
[2025-10-13 10:13:52] 2025-10-13 01:13:30,167 | INFO     | mean x: 1760314525.5
[2025-10-13 10:13:52] 2025-10-13 01:13:30,167 | INFO     | mean y: 2481717.223214286
[2025-10-13 10:13:52] 2025-10-13 01:13:30,167 | INFO     | -- intersect: 72703178059.9305
[2025-10-13 10:13:52] 2025-10-13 01:13:30,167 | INFO     | intersect: 72703178059.9305
[2025-10-13 10:13:52] 2025-10-13 01:13:30,167 | INFO     | chi2: 2.9317927255450353
[2025-10-13 10:13:52] 2025-10-13 01:13:30,167 | INFO     | sum of square deviations: 379832238.0
[2025-10-13 10:13:52] 2025-10-13 01:13:30,167 | INFO     | sum of deviations: -9114012378.999998
[2025-10-13 10:13:52] 2025-10-13 01:13:30,167 | INFO     | mean x: 1760314373.0
[2025-10-13 10:13:52] 2025-10-13 01:13:30,167 | INFO     | mean y: 2505360.878504673
[2025-10-13 10:13:52] 2025-10-13 01:13:30,167 | INFO     | -- intersect: 42240960608.728264
[2025-10-13 10:13:52] 2025-10-13 01:13:30,167 | INFO     | intersect: 42240960608.728264
[2025-10-13 10:13:52] 2025-10-13 01:13:30,168 | INFO     | chi2: 2.303071063120335
[2025-10-13 10:13:52] 2025-10-13 01:13:30,168 | INFO     | current chi2=2.303071063120335 (change=21.44495608255587 %)
[2025-10-13 10:13:52] 2025-10-13 01:13:30,168 | INFO     | right removable region: 106
[2025-10-13 10:13:52] 2025-10-13 01:13:30,168 | INFO     | sum of square deviations: 379832238.0
[2025-10-13 10:13:52] 2025-10-13 01:13:30,168 | INFO     | sum of deviations: -39967383854.0
[2025-10-13 10:13:52] 2025-10-13 01:13:30,168 | INFO     | mean x: 1760314678.0
[2025-10-13 10:13:52] 2025-10-13 01:13:30,168 | INFO     | mean y: 2541102.9906542054
[2025-10-13 10:13:52] 2025-10-13 01:13:30,168 | INFO     | -- intersect: 185229505538.4223
[2025-10-13 10:13:52] 2025-10-13 01:13:30,168 | INFO     | intersect: 185229505538.4223
[2025-10-13 10:13:52] 2025-10-13 01:13:30,168 | INFO     | chi2: 0.8794267199567422
[2025-10-13 10:13:52] 2025-10-13 01:13:30,168 | INFO     | current chi2=0.8794267199567422 (change=70.00378941204815 %)
[2025-10-13 10:13:52] 2025-10-13 01:13:30,168 | INFO     | sum of square deviations: 329031285.5
[2025-10-13 10:13:52] 2025-10-13 01:13:30,169 | INFO     | sum of deviations: -37854359378.500015
[2025-10-13 10:13:52] 2025-10-13 01:13:30,169 | INFO     | mean x: 1760314830.5
[2025-10-13 10:13:52] 2025-10-13 01:13:30,169 | INFO     | mean y: 2534688.637254902
[2025-10-13 10:13:52] 2025-10-13 01:13:30,169 | INFO     | -- intersect: 202523064345.2323
[2025-10-13 10:13:52] 2025-10-13 01:13:30,169 | INFO     | intersect: 202523064345.2323
[2025-10-13 10:13:52] 2025-10-13 01:13:30,169 | INFO     | chi2: 0.8561362298322892
[2025-10-13 10:13:52] 2025-10-13 01:13:30,169 | INFO     | current chi2=0.8561362298322892 (change=2.6483718990933744 %)
[2025-10-13 10:13:52] 2025-10-13 01:13:30,169 | INFO     | left removable region: 20
[2025-10-13 10:13:52] 2025-10-13 01:13:30,169 | INFO     | sum of square deviations: 197203697.5
[2025-10-13 10:13:52] 2025-10-13 01:13:30,169 | INFO     | sum of deviations: -23118151123.999992
[2025-10-13 10:13:52] 2025-10-13 01:13:30,169 | INFO     | mean x: 1760314952.5
[2025-10-13 10:13:52] 2025-10-13 01:13:30,169 | INFO     | mean y: 2544882.11627907
[2025-10-13 10:13:52] 2025-10-13 01:13:30,169 | INFO     | -- intersect: 206363924580.54648
[2025-10-13 10:13:52] 2025-10-13 01:13:30,169 | INFO     | intersect: 206363924580.54648
[2025-10-13 10:13:52] 2025-10-13 01:13:30,169 | INFO     | chi2: 0.16329952470823964
[2025-10-13 10:13:52] 2025-10-13 01:13:30,169 | INFO     | -- intersect: 206363924580.54648
[2025-10-13 10:13:52] 2025-10-13 01:13:30,170 | INFO     | current memory leak: -117.23 B/s (using 86 data points, chi2=0.16)
[2025-10-13 10:13:52] 2025-10-13 01:13:30,170 | INFO     | could have reported an average CPU frequency of 3551 MHz (7 samples)
[2025-10-13 10:13:52] 2025-10-13 01:13:30,170 | INFO     | ..............................
[2025-10-13 10:13:52] 2025-10-13 01:13:30,170 | INFO     | . Timing measurements:
[2025-10-13 10:13:52] 2025-10-13 01:13:30,170 | INFO     | . get job = 0 s
[2025-10-13 10:13:52] 2025-10-13 01:13:30,170 | INFO     | . initial setup = 6 s
[2025-10-13 10:13:52] 2025-10-13 01:13:30,170 | INFO     | . payload setup = 5 s
[2025-10-13 10:13:52] 2025-10-13 01:13:30,170 | INFO     | . stage-in = 0 s
[2025-10-13 10:13:52] 2025-10-13 01:13:30,170 | INFO     | . payload execution = 6787 s
[2025-10-13 10:13:52] 2025-10-13 01:13:30,170 | INFO     | . stage-out = 0 s
[2025-10-13 10:13:52] 2025-10-13 01:13:30,170 | INFO     | . log creation = 0 s
[2025-10-13 10:13:52] 2025-10-13 01:13:30,170 | INFO     | ..............................
[2025-10-13 10:13:52] 2025-10-13 01:13:30,208 | INFO     | 
[2025-10-13 10:13:52] 2025-10-13 01:13:30,208 | INFO     | job summary report
[2025-10-13 10:13:52] 2025-10-13 01:13:30,208 | INFO     | --------------------------------------------------
[2025-10-13 10:13:52] 2025-10-13 01:13:30,208 | INFO     | PanDA job id: 6838200202
[2025-10-13 10:13:52] 2025-10-13 01:13:30,208 | INFO     | task id: 46676269
[2025-10-13 10:13:52] 2025-10-13 01:13:30,208 | INFO     | errors: (none)
[2025-10-13 10:13:52] 2025-10-13 01:13:30,208 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 10:13:52] 2025-10-13 01:13:30,208 | INFO     | pilot state: finished 
[2025-10-13 10:13:52] 2025-10-13 01:13:30,208 | INFO     | transexitcode: 0
[2025-10-13 10:13:52] 2025-10-13 01:13:30,208 | INFO     | exeerrorcode: 0
[2025-10-13 10:13:52] 2025-10-13 01:13:30,208 | INFO     | exeerrordiag: 
[2025-10-13 10:13:52] 2025-10-13 01:13:30,208 | INFO     | exitcode: 0
[2025-10-13 10:13:52] 2025-10-13 01:13:30,208 | INFO     | exitmsg: OK
[2025-10-13 10:13:52] 2025-10-13 01:13:30,208 | INFO     | cpuconsumptiontime: 19123 s
[2025-10-13 10:13:52] 2025-10-13 01:13:30,209 | INFO     | nevents: 400
[2025-10-13 10:13:52] 2025-10-13 01:13:30,209 | INFO     | neventsw: 0
[2025-10-13 10:13:52] 2025-10-13 01:13:30,209 | INFO     | pid: 573677
[2025-10-13 10:13:52] 2025-10-13 01:13:30,209 | INFO     | pgrp: 573677
[2025-10-13 10:13:52] 2025-10-13 01:13:30,209 | INFO     | corecount: 3
[2025-10-13 10:13:52] 2025-10-13 01:13:30,209 | INFO     | event service: False
[2025-10-13 10:13:52] 2025-10-13 01:13:30,209 | INFO     | sizes: {0: 2348857, 4: 2349119, 11: 2349147, 6796: 2376349, 6797: 2385347, 6799: 2385403, 6880: 2385725}
[2025-10-13 10:13:52] 2025-10-13 01:13:30,209 | INFO     | --------------------------------------------------
[2025-10-13 10:13:52] 2025-10-13 01:13:30,209 | INFO     | 
[2025-10-13 10:13:52] 2025-10-13 01:13:30,209 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-10-13 10:13:52] 2025-10-13 01:13:30,219 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 10:13:52] 2025-10-13 01:13:30,219 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 10:13:52] 2025-10-13 01:13:30,219 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 10:13:52] 2025-10-13 01:13:30,219 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 10:13:52] 2025-10-13 01:13:30,220 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 10:13:52] 2025-10-13 01:13:30,220 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 10:13:52] 2025-10-13 01:13:30,220 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 10:13:52] 2025-10-13 01:13:30,220 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 10:13:52] 2025-10-13 01:13:30,220 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 10:13:52] 2025-10-13 01:13:30,220 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 10:13:52] 2025-10-13 01:13:30,220 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 10:13:52] 2025-10-13 01:13:30,220 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 10:13:52] 2025-10-13 01:13:30,220 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 10:13:52] 2025-10-13 01:13:30,220 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 10:13:52] 2025-10-13 01:13:30,220 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 10:13:52] 2025-10-13 01:13:30,220 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 10:13:52] 2025-10-13 01:13:30,220 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 10:13:52] 2025-10-13 01:13:30,220 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 10:13:52] 2025-10-13 01:13:30,220 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 10:13:52] 2025-10-13 01:13:30,220 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 10:13:52] 2025-10-13 01:13:30,220 | INFO     | job 6838200202 has completed (purged errors)
[2025-10-13 10:13:52] 2025-10-13 01:13:30,220 | INFO     | overall cleanup function is called
[2025-10-13 10:13:52] 2025-10-13 01:13:31,226 | INFO     | --- collectZombieJob: --- 10, [573677]
[2025-10-13 10:13:52] 2025-10-13 01:13:31,226 | INFO     | zombie collector waiting for pid 573677
[2025-10-13 10:13:52] 2025-10-13 01:13:31,226 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 10:13:52] 2025-10-13 01:13:31,226 | INFO     | collected zombie processes
[2025-10-13 10:13:52] 2025-10-13 01:13:31,226 | INFO     | will attempt to kill all subprocesses of pid=573677
[2025-10-13 10:13:52] 2025-10-13 01:13:31,263 | INFO     | process IDs to be killed: [573677] (in reverse order)
[2025-10-13 10:13:52] 2025-10-13 01:13:31,283 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 10:13:52] 2025-10-13 01:13:31,284 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 10:13:52] 2025-10-13 01:13:31,285 | INFO     | did not find any defunct processes belonging to 573677
[2025-10-13 10:13:52] 2025-10-13 01:13:31,286 | INFO     | did not find any defunct processes belonging to 573677
[2025-10-13 10:13:52] 2025-10-13 01:13:31,286 | INFO     | ready for new job
[2025-10-13 10:13:52] 2025-10-13 01:13:31,286 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 10:13:52] 2025-10-13 01:13:31,287 | INFO     | ***************************************
[2025-10-13 10:13:52] 2025-10-13 01:13:31,287 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 10:13:52] 2025-10-13 01:13:31,287 | INFO     | ***************************************
[2025-10-13 10:13:52] 2025-10-13 01:13:31,287 | INFO     | 
[2025-10-13 10:13:52] 2025-10-13 01:13:31,299 | INFO     | architecture information:
[2025-10-13 10:13:52] 2025-10-13 01:13:31,300 | INFO     | executing command: cat /etc/os-release
[2025-10-13 10:13:52] 2025-10-13 01:13:31,308 | INFO     | cat /etc/os-release:
[2025-10-13 10:13:52] NAME="CentOS Linux"
[2025-10-13 10:13:52] VERSION="7 (Core)"
[2025-10-13 10:13:52] ID="centos"
[2025-10-13 10:13:52] ID_LIKE="rhel fedora"
[2025-10-13 10:13:52] VERSION_ID="7"
[2025-10-13 10:13:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 10:13:52] ANSI_COLOR="0;31"
[2025-10-13 10:13:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 10:13:52] HOME_URL="https://www.centos.org/"
[2025-10-13 10:13:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 10:13:52] 
[2025-10-13 10:13:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 10:13:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 10:13:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 10:13:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 10:13:52] 
[2025-10-13 10:13:52] 2025-10-13 01:13:31,308 | INFO     | ***************************************
[2025-10-13 10:13:52] 2025-10-13 01:13:31,810 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-10-13 10:13:52] 2025-10-13 01:13:31,819 | INFO     | sufficient remaining disk space (40208695296 B)
[2025-10-13 10:13:52] 2025-10-13 01:13:31,819 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 10:13:52] 2025-10-13 01:13:31,819 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 10:13:52] 2025-10-13 01:13:31,819 | INFO     | update_server=False
[2025-10-13 10:13:52] 2025-10-13 01:13:31,819 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 10:13:52] 2025-10-13 01:13:31,819 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:13:52] 2025-10-13 01:13:31,820 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 10:13:52] 2025-10-13 01:13:31,820 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 10:13:52] 2025-10-13 01:13:31,820 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 10:13:52] 2025-10-13 01:13:31,820 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 10:13:52] 2025-10-13 01:13:31,820 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 10:13:52] 2025-10-13 01:13:32,366 | INFO     | all job control threads have been joined
[2025-10-13 10:13:52] 2025-10-13 01:13:32,506 | INFO     | all payload control threads have been joined
[2025-10-13 10:13:52] 2025-10-13 01:13:32,615 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:13:52] 2025-10-13 01:13:32,615 | INFO     | aborting loop
[2025-10-13 10:13:52] 2025-10-13 01:13:32,781 | INFO     | all data control threads have been joined
[2025-10-13 10:13:52] 2025-10-13 01:13:32,824 | INFO     | [job] queue monitor thread has finished
[2025-10-13 10:13:52] 2025-10-13 01:13:32,824 | INFO     | [job] retrieve thread has finished
[2025-10-13 10:13:52] 2025-10-13 01:13:32,829 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 10:13:52] 2025-10-13 01:13:32,904 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 10:13:52] 2025-10-13 01:13:33,369 | INFO     | [job] control thread has finished
[2025-10-13 10:13:52] 2025-10-13 01:13:33,455 | INFO     | [payload] failed_post thread has finished
[2025-10-13 10:13:52] 2025-10-13 01:13:33,511 | INFO     | [payload] control thread has finished
[2025-10-13 10:13:52] 2025-10-13 01:13:33,620 | INFO     | [job] job monitor thread has finished
[2025-10-13 10:13:52] 2025-10-13 01:13:33,783 | INFO     | [data] copytool_in thread has finished
[2025-10-13 10:13:52] 2025-10-13 01:13:33,786 | INFO     | [data] control thread has finished
[2025-10-13 10:13:52] 2025-10-13 01:13:33,864 | INFO     | [job] validate thread has finished
[2025-10-13 10:13:52] 2025-10-13 01:13:33,931 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 10:13:52] 2025-10-13 01:13:34,003 | INFO     | [payload] validate_post thread has finished
[2025-10-13 10:13:52] 2025-10-13 01:13:34,050 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 10:13:52] 2025-10-13 01:13:34,909 | INFO     | [data] copytool_out thread has finished
[2025-10-13 10:13:52] 2025-10-13 01:13:35,825 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 10:13:52] 2025-10-13 01:13:42,701 | INFO     | job.realtimelogging is not enabled
[2025-10-13 10:13:52] 2025-10-13 01:13:43,706 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 10:13:52] 2025-10-13 01:13:46,221 | INFO     | [monitor] cgroup control has ended
[2025-10-13 10:13:52] 2025-10-13 01:13:47,226 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140214495835968)>', '<ExcThread(monitor, started 140213628167936)>']
[2025-10-13 10:13:52] 2025-10-13 01:13:47,895 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 10:13:52] 2025-10-13 01:13:47,895 | INFO     | [monitor] control thread has ended
[2025-10-13 10:13:52] 2025-10-13 01:13:52,251 | INFO     | all workflow threads have been joined
[2025-10-13 10:13:52] 2025-10-13 01:13:52,251 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 10:13:52] 2025-10-13 01:13:52,252 | INFO     | traces error code: 0
[2025-10-13 10:13:52] 2025-10-13 01:13:52,252 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 10:13:52] 2025-10-13 01:13:52,311 [wrapper] ==== pilot stdout END ====
[2025-10-13 10:13:52] 2025-10-13 01:13:52,313 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 10:13:52] 2025-10-13 01:13:52,315 [wrapper] pilotpid: 567141
[2025-10-13 10:13:52] 2025-10-13 01:13:52,316 [wrapper] Pilot exit status: 0
[2025-10-13 10:13:52] 2025-10-13 01:13:52,322 [wrapper] pandaids: 6838200202
[2025-10-13 10:13:52] 2025-10-13 01:13:52,335 [wrapper] cleanup supervisor_pilot  587870 567142
[2025-10-13 10:13:52] 2025-10-13 01:13:52,336 [wrapper] Test setup, not cleaning
[2025-10-13 10:13:52] 2025-10-13 01:13:52,338 [wrapper] apfmon messages muted
[2025-10-13 10:13:52] 2025-10-13 01:13:52,339 [wrapper] ==== wrapper stdout END ====
[2025-10-13 10:13:52] 2025-10-13 01:13:52,341 [wrapper] ==== wrapper stderr END ====
[2025-10-13 10:13:52]  *** Error codes and diagnostics ***
[2025-10-13 10:13:52]     "exeErrorCode": 0,
[2025-10-13 10:13:52]     "exeErrorDiag": "",
[2025-10-13 10:13:52]     "pilotErrorCode": 0,
[2025-10-13 10:13:52]     "pilotErrorDiag": "",
[2025-10-13 10:13:52]  *** Listing of results directory ***
[2025-10-13 10:13:52] total 411460
[2025-10-13 10:13:52] -rw-r--r--. 1 boinc boinc    557409 Oct 11 16:43 pilot3.tar.gz
[2025-10-13 10:13:52] -rw-r--r--. 1 boinc boinc      5112 Oct 11 16:51 queuedata.json
[2025-10-13 10:13:52] -rwx------. 1 boinc boinc     36292 Oct 11 16:51 runpilot2-wrapper.sh
[2025-10-13 10:13:52] -rw-r--r--. 1 boinc boinc       100 Oct 13 08:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 10:13:52] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 08:15 run_atlas
[2025-10-13 10:13:52] -rw-r--r--. 1 boinc boinc       105 Oct 13 08:15 job.xml
[2025-10-13 10:13:52] -rw-r--r--. 1 boinc boinc      9291 Oct 13 08:15 init_data.xml
[2025-10-13 10:13:52] -rw-r--r--. 2 boinc boinc 219749234 Oct 13 08:15 EVNT.46676267._002162.pool.root.1
[2025-10-13 10:13:52] -rw-r--r--. 2 boinc boinc     15120 Oct 13 08:15 start_atlas.sh
[2025-10-13 10:13:52] drwxrwx--x. 2 boinc boinc        68 Oct 13 08:15 shared
[2025-10-13 10:13:52] -rw-r--r--. 2 boinc boinc    569679 Oct 13 08:15 input.tar.gz
[2025-10-13 10:13:52] -rw-r--r--. 1 boinc boinc         0 Oct 13 08:15 boinc_lockfile
[2025-10-13 10:13:52] -rw-r--r--. 1 boinc boinc      2550 Oct 13 08:17 pandaJob.out
[2025-10-13 10:13:52] -rw-------. 1 boinc boinc    975603 Oct 13 08:18 agis_schedconf.cvmfs.json
[2025-10-13 10:13:52] -rw-------. 1 boinc boinc   1560580 Oct 13 08:18 agis_ddmendpoints.agis.ALL.json
[2025-10-13 10:13:52] drwx------. 5 boinc boinc      4096 Oct 13 08:18 pilot3
[2025-10-13 10:13:52] -rw-------. 1 boinc boinc 195206774 Oct 13 10:11 HITS.46676269._053868.pool.root.1
[2025-10-13 10:13:52] -rw-r--r--. 1 boinc boinc       529 Oct 13 10:11 boinc_task_state.xml
[2025-10-13 10:13:52] -rw-------. 1 boinc boinc      1010 Oct 13 10:12 memory_monitor_summary.json
[2025-10-13 10:13:52] -rw-------. 1 boinc boinc    267851 Oct 13 10:12 log.46676269._053868.job.log.tgz.1
[2025-10-13 10:13:52] -rw-------. 1 boinc boinc        95 Oct 13 10:13 pilot_heartbeat.json
[2025-10-13 10:13:52] -rw-------. 1 boinc boinc      7768 Oct 13 10:13 heartbeat.json
[2025-10-13 10:13:52] -rw-r--r--. 1 boinc boinc        27 Oct 13 10:13 wrapper_checkpoint.txt
[2025-10-13 10:13:52] -rw-r--r--. 1 boinc boinc      8192 Oct 13 10:13 boinc_mmap_file
[2025-10-13 10:13:52] -rw-------. 1 boinc boinc      4624 Oct 13 10:13 pilotlog.txt
[2025-10-13 10:13:52] -rw-------. 1 boinc boinc    975190 Oct 13 10:13 log.46676269._053868.job.log.1
[2025-10-13 10:13:52] -rw-------. 1 boinc boinc       357 Oct 13 10:13 output.list
[2025-10-13 10:13:52] -rw-r--r--. 1 boinc boinc       620 Oct 13 10:13 runtime_log
[2025-10-13 10:13:52] -rw-------. 1 boinc boinc   1259520 Oct 13 10:13 result.tar.gz
[2025-10-13 10:13:52] -rw-r--r--. 1 boinc boinc      8661 Oct 13 10:13 runtime_log.err
[2025-10-13 10:13:52] -rw-------. 1 boinc boinc       643 Oct 13 10:13 ptkLDmMZjR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmcofNDmuIZnPn.diag
[2025-10-13 10:13:52] -rw-r--r--. 1 boinc boinc     20670 Oct 13 10:13 stderr.txt
[2025-10-13 10:13:52] HITS file was successfully produced:
[2025-10-13 10:13:52] -rw-------. 1 boinc boinc 195206774 Oct 13 10:11 shared/HITS.pool.root.1
[2025-10-13 10:13:52]  *** Contents of shared directory: ***
[2025-10-13 10:13:52] total 407040
[2025-10-13 10:13:52] -rw-r--r--. 2 boinc boinc 219749234 Oct 13 08:15 ATLAS.root_0
[2025-10-13 10:13:52] -rw-r--r--. 2 boinc boinc     15120 Oct 13 08:15 start_atlas.sh
[2025-10-13 10:13:52] -rw-r--r--. 2 boinc boinc    569679 Oct 13 08:15 input.tar.gz
[2025-10-13 10:13:52] -rw-------. 1 boinc boinc 195206774 Oct 13 10:11 HITS.pool.root.1
[2025-10-13 10:13:52] -rw-------. 1 boinc boinc   1259520 Oct 13 10:13 result.tar.gz
10:13:53 (562862): run_atlas exited; CPU time 19153.718879
10:13:53 (562862): called boinc_finish(0)

</stderr_txt>
]]>

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