Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:24:04 (2975915): wrapper (7.7.26015): starting
05:24:04 (2975915): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 05:24:04] Arguments: --nthreads 4
[2025-10-12 05:24:04] Threads: 4
[2025-10-12 05:24:04] Checking for CVMFS
[2025-10-12 05:24:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 05:24:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 05:24:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 05:24:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 05:24:05] 2.13.2.0 1261730 1380 50596 151592 1 188 3640485 6144000 1926 130560 0 3705583 99.997 45614 134 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.253:3128 1
[2025-10-12 05:24:05] CVMFS is ok
[2025-10-12 05:24:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 05:24:05] Checking for apptainer binary...
[2025-10-12 05:24:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 05:24:05] Running /usr/bin/apptainer --version
[2025-10-12 05:24:05] apptainer version 1.4.0
[2025-10-12 05:24:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 05:24:05] Zen
[2025-10-12 05:24:05] apptainer works
[2025-10-12 05:24:05] Set ATHENA_PROC_NUMBER=4
[2025-10-12 05:24:05] Set ATHENA_CORE_NUMBER=4
[2025-10-12 05:24:05] Starting ATLAS job with PandaID=6838200258
[2025-10-12 05:24:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/michael/Boinc/BOINC/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 07:19:33]  *** The last 200 lines of the pilot log: ***
[2025-10-12 07:19:33] 2025-10-11 20:18:29,805 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 07:19:33] 2025-10-11 20:18:29,807 | INFO     | found 12 cores (12 cores per socket, 1 socket) HT, CPU MHz: 4069.782291666667
[2025-10-12 07:19:33] 2025-10-11 20:18:29,809 | INFO     | using path: /home/michael/Boinc/BOINC/slots/4/PanDA_Pilot-6838200258/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 07:19:33] 2025-10-11 20:18:29,809 | INFO     | extracted standard info from prmon json
[2025-10-12 07:19:33] 2025-10-11 20:18:29,809 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 07:19:33] 2025-10-11 20:18:29,809 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 07:19:33] 2025-10-11 20:18:29,810 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 07:19:33] 2025-10-11 20:18:29,810 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 07:19:33] 2025-10-11 20:18:29,811 | INFO     | fitting pss+swap vs Time
[2025-10-12 07:19:33] 2025-10-11 20:18:29,811 | INFO     | sum of square deviations: 435610028.0
[2025-10-12 07:19:33] 2025-10-11 20:18:29,811 | INFO     | sum of deviations: 16992025098.500004
[2025-10-12 07:19:33] 2025-10-11 20:18:29,811 | INFO     | mean x: 1760210462.5
[2025-10-12 07:19:33] 2025-10-11 20:18:29,811 | INFO     | mean y: 2289434.8839285714
[2025-10-12 07:19:33] 2025-10-11 20:18:29,811 | INFO     | -- intersect: -68658986557.23419
[2025-10-12 07:19:33] 2025-10-11 20:18:29,811 | INFO     | intersect: -68658986557.23419
[2025-10-12 07:19:33] 2025-10-11 20:18:29,811 | INFO     | chi2: 1.8893382646237658
[2025-10-12 07:19:33] 2025-10-11 20:18:29,811 | INFO     | sum of square deviations: 379832238.0
[2025-10-12 07:19:33] 2025-10-11 20:18:29,811 | INFO     | sum of deviations: 16338307831.999992
[2025-10-12 07:19:33] 2025-10-11 20:18:29,811 | INFO     | mean x: 1760210310.0
[2025-10-12 07:19:33] 2025-10-11 20:18:29,811 | INFO     | mean y: 2287648.5327102803
[2025-10-12 07:19:33] 2025-10-11 20:18:29,811 | INFO     | -- intersect: -75712343751.02777
[2025-10-12 07:19:33] 2025-10-11 20:18:29,811 | INFO     | intersect: -75712343751.02777
[2025-10-12 07:19:33] 2025-10-11 20:18:29,812 | INFO     | chi2: 1.8926965973450567
[2025-10-12 07:19:33] 2025-10-11 20:18:29,812 | INFO     | current chi2=1.8926965973450567 (change=-0.1777517972388972 %)
[2025-10-12 07:19:33] 2025-10-11 20:18:29,812 | INFO     | right removable region: 106
[2025-10-12 07:19:33] 2025-10-11 20:18:29,812 | INFO     | sum of square deviations: 379832238.0
[2025-10-12 07:19:33] 2025-10-11 20:18:29,812 | INFO     | sum of deviations: -2510097662.0
[2025-10-12 07:19:33] 2025-10-11 20:18:29,812 | INFO     | mean x: 1760210615.0
[2025-10-12 07:19:33] 2025-10-11 20:18:29,812 | INFO     | mean y: 2341923.2056074766
[2025-10-12 07:19:33] 2025-10-11 20:18:29,812 | INFO     | -- intersect: 11634584021.989973
[2025-10-12 07:19:33] 2025-10-11 20:18:29,812 | INFO     | intersect: 11634584021.989973
[2025-10-12 07:19:33] 2025-10-11 20:18:29,812 | INFO     | chi2: 0.0028537868462055836
[2025-10-12 07:19:33] 2025-10-11 20:18:29,812 | INFO     | current chi2=0.0028537868462055836 (change=99.84895310174782 %)
[2025-10-12 07:19:33] 2025-10-11 20:18:29,812 | INFO     | sum of square deviations: 329031285.5
[2025-10-12 07:19:33] 2025-10-11 20:18:29,812 | INFO     | sum of deviations: -2361881142.9999995
[2025-10-12 07:19:33] 2025-10-11 20:18:29,812 | INFO     | mean x: 1760210767.5
[2025-10-12 07:19:33] 2025-10-11 20:18:29,812 | INFO     | mean y: 2341484.411764706
[2025-10-12 07:19:33] 2025-10-11 20:18:29,812 | INFO     | -- intersect: 12637640322.776503
[2025-10-12 07:19:33] 2025-10-11 20:18:29,812 | INFO     | intersect: 12637640322.776503
[2025-10-12 07:19:33] 2025-10-11 20:18:29,813 | INFO     | chi2: 0.0025984722715090103
[2025-10-12 07:19:33] 2025-10-11 20:18:29,813 | INFO     | current chi2=0.0025984722715090103 (change=8.946518729527451 %)
[2025-10-12 07:19:33] 2025-10-11 20:18:29,813 | INFO     | left removable region: 20
[2025-10-12 07:19:33] 2025-10-11 20:18:29,813 | INFO     | sum of square deviations: 197203697.5
[2025-10-12 07:19:33] 2025-10-11 20:18:29,813 | INFO     | sum of deviations: -1869994192.5000002
[2025-10-12 07:19:33] 2025-10-11 20:18:29,813 | INFO     | mean x: 1760210889.5
[2025-10-12 07:19:33] 2025-10-11 20:18:29,813 | INFO     | mean y: 2341382.895348837
[2025-10-12 07:19:33] 2025-10-11 20:18:29,813 | INFO     | -- intersect: 16693631569.988619
[2025-10-12 07:19:33] 2025-10-11 20:18:29,813 | INFO     | intersect: 16693631569.988619
[2025-10-12 07:19:33] 2025-10-11 20:18:29,813 | INFO     | chi2: 0.0021008152917943532
[2025-10-12 07:19:33] 2025-10-11 20:18:29,813 | INFO     | -- intersect: 16693631569.988619
[2025-10-12 07:19:33] 2025-10-11 20:18:29,813 | INFO     | current memory leak: -9.48 B/s (using 86 data points, chi2=0.00)
[2025-10-12 07:19:33] 2025-10-11 20:18:29,813 | INFO     | could have reported an average CPU frequency of 4102 MHz (7 samples)
[2025-10-12 07:19:33] 2025-10-11 20:18:29,813 | INFO     | ..............................
[2025-10-12 07:19:33] 2025-10-11 20:18:29,813 | INFO     | . Timing measurements:
[2025-10-12 07:19:33] 2025-10-11 20:18:29,813 | INFO     | . get job = 0 s
[2025-10-12 07:19:33] 2025-10-11 20:18:29,813 | INFO     | . initial setup = 5 s
[2025-10-12 07:19:33] 2025-10-11 20:18:29,813 | INFO     | . payload setup = 3 s
[2025-10-12 07:19:33] 2025-10-11 20:18:29,813 | INFO     | . stage-in = 0 s
[2025-10-12 07:19:33] 2025-10-11 20:18:29,813 | INFO     | . payload execution = 6828 s
[2025-10-12 07:19:33] 2025-10-11 20:18:29,813 | INFO     | . stage-out = 0 s
[2025-10-12 07:19:33] 2025-10-11 20:18:29,813 | INFO     | . log creation = 0 s
[2025-10-12 07:19:33] 2025-10-11 20:18:29,813 | INFO     | ..............................
[2025-10-12 07:19:33] 2025-10-11 20:18:29,860 | INFO     | 
[2025-10-12 07:19:33] 2025-10-11 20:18:29,860 | INFO     | job summary report
[2025-10-12 07:19:33] 2025-10-11 20:18:29,860 | INFO     | --------------------------------------------------
[2025-10-12 07:19:33] 2025-10-11 20:18:29,860 | INFO     | PanDA job id: 6838200258
[2025-10-12 07:19:33] 2025-10-11 20:18:29,860 | INFO     | task id: 46676269
[2025-10-12 07:19:33] 2025-10-11 20:18:29,860 | INFO     | errors: (none)
[2025-10-12 07:19:33] 2025-10-11 20:18:29,860 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 07:19:33] 2025-10-11 20:18:29,860 | INFO     | pilot state: finished 
[2025-10-12 07:19:33] 2025-10-11 20:18:29,860 | INFO     | transexitcode: 0
[2025-10-12 07:19:33] 2025-10-11 20:18:29,860 | INFO     | exeerrorcode: 0
[2025-10-12 07:19:33] 2025-10-11 20:18:29,860 | INFO     | exeerrordiag: 
[2025-10-12 07:19:33] 2025-10-11 20:18:29,860 | INFO     | exitcode: 0
[2025-10-12 07:19:33] 2025-10-11 20:18:29,861 | INFO     | exitmsg: OK
[2025-10-12 07:19:33] 2025-10-11 20:18:29,861 | INFO     | cpuconsumptiontime: 26291 s
[2025-10-12 07:19:33] 2025-10-11 20:18:29,861 | INFO     | nevents: 400
[2025-10-12 07:19:33] 2025-10-11 20:18:29,861 | INFO     | neventsw: 0
[2025-10-12 07:19:33] 2025-10-11 20:18:29,861 | INFO     | pid: 2988214
[2025-10-12 07:19:33] 2025-10-11 20:18:29,861 | INFO     | pgrp: 2988214
[2025-10-12 07:19:33] 2025-10-11 20:18:29,861 | INFO     | corecount: 4
[2025-10-12 07:19:33] 2025-10-11 20:18:29,861 | INFO     | event service: False
[2025-10-12 07:19:33] 2025-10-11 20:18:29,861 | INFO     | sizes: {0: 2348868, 3: 2349130, 11: 2349158, 6835: 2376455, 6836: 2385530, 6837: 2385530, 6839: 2385852}
[2025-10-12 07:19:33] 2025-10-11 20:18:29,861 | INFO     | --------------------------------------------------
[2025-10-12 07:19:33] 2025-10-11 20:18:29,861 | INFO     | 
[2025-10-12 07:19:33] 2025-10-11 20:18:29,861 | INFO     | executing command: ls -lF /home/michael/Boinc/BOINC/slots/4
[2025-10-12 07:19:33] 2025-10-11 20:18:29,877 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 07:19:33] 2025-10-11 20:18:29,877 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 07:19:33] 2025-10-11 20:18:29,877 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 07:19:33] 2025-10-11 20:18:29,877 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 07:19:33] 2025-10-11 20:18:29,877 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 07:19:33] 2025-10-11 20:18:29,878 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 07:19:33] 2025-10-11 20:18:29,878 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 07:19:33] 2025-10-11 20:18:29,878 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 07:19:33] 2025-10-11 20:18:29,878 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 07:19:33] 2025-10-11 20:18:29,878 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 07:19:33] 2025-10-11 20:18:29,878 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 07:19:33] 2025-10-11 20:18:29,878 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 07:19:33] 2025-10-11 20:18:29,878 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 07:19:33] 2025-10-11 20:18:29,878 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 07:19:33] 2025-10-11 20:18:29,878 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 07:19:33] 2025-10-11 20:18:29,878 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 07:19:33] 2025-10-11 20:18:29,878 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 07:19:33] 2025-10-11 20:18:29,878 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 07:19:33] 2025-10-11 20:18:29,878 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 07:19:33] 2025-10-11 20:18:29,878 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 07:19:33] 2025-10-11 20:18:29,878 | INFO     | job 6838200258 has completed (purged errors)
[2025-10-12 07:19:33] 2025-10-11 20:18:29,879 | INFO     | overall cleanup function is called
[2025-10-12 07:19:33] 2025-10-11 20:18:30,885 | INFO     | --- collectZombieJob: --- 10, [2988214]
[2025-10-12 07:19:33] 2025-10-11 20:18:30,886 | INFO     | zombie collector waiting for pid 2988214
[2025-10-12 07:19:33] 2025-10-11 20:18:30,886 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 07:19:33] 2025-10-11 20:18:30,886 | INFO     | collected zombie processes
[2025-10-12 07:19:33] 2025-10-11 20:18:30,886 | INFO     | will attempt to kill all subprocesses of pid=2988214
[2025-10-12 07:19:33] 2025-10-11 20:18:30,999 | INFO     | process IDs to be killed: [2988214] (in reverse order)
[2025-10-12 07:19:33] 2025-10-11 20:18:31,040 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 07:19:33] 2025-10-11 20:18:31,041 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 07:19:33] 2025-10-11 20:18:31,045 | INFO     | did not find any defunct processes belonging to 2988214
[2025-10-12 07:19:33] 2025-10-11 20:18:31,048 | INFO     | did not find any defunct processes belonging to 2988214
[2025-10-12 07:19:33] 2025-10-11 20:18:31,048 | INFO     | ready for new job
[2025-10-12 07:19:33] 2025-10-11 20:18:31,048 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 07:19:33] 2025-10-11 20:18:31,049 | INFO     | ***************************************
[2025-10-12 07:19:33] 2025-10-11 20:18:31,049 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 07:19:33] 2025-10-11 20:18:31,049 | INFO     | ***************************************
[2025-10-12 07:19:33] 2025-10-11 20:18:31,049 | INFO     | 
[2025-10-12 07:19:33] 2025-10-11 20:18:31,050 | INFO     | architecture information:
[2025-10-12 07:19:33] 2025-10-11 20:18:31,051 | INFO     | executing command: cat /etc/os-release
[2025-10-12 07:19:33] 2025-10-11 20:18:31,062 | INFO     | cat /etc/os-release:
[2025-10-12 07:19:33] NAME="CentOS Linux"
[2025-10-12 07:19:33] VERSION="7 (Core)"
[2025-10-12 07:19:33] ID="centos"
[2025-10-12 07:19:33] ID_LIKE="rhel fedora"
[2025-10-12 07:19:33] VERSION_ID="7"
[2025-10-12 07:19:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 07:19:33] ANSI_COLOR="0;31"
[2025-10-12 07:19:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 07:19:33] HOME_URL="https://www.centos.org/"
[2025-10-12 07:19:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 07:19:33] 
[2025-10-12 07:19:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 07:19:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 07:19:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 07:19:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 07:19:33] 
[2025-10-12 07:19:33] 2025-10-11 20:18:31,063 | INFO     | ***************************************
[2025-10-12 07:19:33] 2025-10-11 20:18:31,565 | INFO     | executing command: df -mP /home/michael/Boinc/BOINC/slots/4
[2025-10-12 07:19:33] 2025-10-11 20:18:31,575 | INFO     | sufficient remaining disk space (206997291008 B)
[2025-10-12 07:19:33] 2025-10-11 20:18:31,575 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 07:19:33] 2025-10-11 20:18:31,575 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 07:19:33] 2025-10-11 20:18:31,575 | INFO     | update_server=False
[2025-10-12 07:19:33] 2025-10-11 20:18:31,575 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 07:19:33] 2025-10-11 20:18:31,575 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 07:19:33] 2025-10-11 20:18:31,703 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 07:19:33] 2025-10-11 20:18:31,704 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 07:19:33] 2025-10-11 20:18:31,704 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 07:19:33] 2025-10-11 20:18:31,704 | INFO     | will abort loop
[2025-10-12 07:19:33] 2025-10-11 20:18:31,979 | INFO     | all job control threads have been joined
[2025-10-12 07:19:33] 2025-10-11 20:18:32,190 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 07:19:33] 2025-10-11 20:18:32,558 | INFO     | all data control threads have been joined
[2025-10-12 07:19:33] 2025-10-11 20:18:32,581 | INFO     | [job] retrieve thread has finished
[2025-10-12 07:19:33] 2025-10-11 20:18:32,581 | INFO     | [job] queue monitor thread has finished
[2025-10-12 07:19:33] 2025-10-11 20:18:32,647 | INFO     | all payload control threads have been joined
[2025-10-12 07:19:33] 2025-10-11 20:18:32,708 | INFO     | [job] job monitor thread has finished
[2025-10-12 07:19:33] 2025-10-11 20:18:32,879 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 07:19:33] 2025-10-11 20:18:32,984 | INFO     | [job] control thread has finished
[2025-10-12 07:19:33] 2025-10-11 20:18:33,081 | INFO     | [payload] failed_post thread has finished
[2025-10-12 07:19:33] 2025-10-11 20:18:33,158 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 07:19:33] 2025-10-11 20:18:33,561 | INFO     | [data] control thread has finished
[2025-10-12 07:19:33] 2025-10-11 20:18:33,612 | INFO     | [payload] validate_post thread has finished
[2025-10-12 07:19:33] 2025-10-11 20:18:33,651 | INFO     | [payload] control thread has finished
[2025-10-12 07:19:33] 2025-10-11 20:18:33,752 | INFO     | [job] validate thread has finished
[2025-10-12 07:19:33] 2025-10-11 20:18:33,880 | INFO     | [data] copytool_in thread has finished
[2025-10-12 07:19:33] 2025-10-11 20:18:34,030 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 07:19:33] 2025-10-11 20:18:34,038 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 07:19:33] 2025-10-11 20:18:34,195 | INFO     | [data] copytool_out thread has finished
[2025-10-12 07:19:33] 2025-10-11 20:18:37,163 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 07:19:33] 2025-10-11 20:18:42,250 | INFO     | job.realtimelogging is not enabled
[2025-10-12 07:19:33] 2025-10-11 20:18:43,254 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 07:19:33] 2025-10-11 20:19:01,418 | INFO     | PID=2981642 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 07:19:33] 2025-10-11 20:19:01,418 | INFO     | .. there are 4 such processes running
[2025-10-12 07:19:33] 2025-10-11 20:19:01,418 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 07:19:33] 2025-10-11 20:19:01,418 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 07:19:33] 2025-10-11 20:19:01,418 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 07:19:33] 2025-10-11 20:19:27,088 | INFO     | [monitor] cgroup control has ended
[2025-10-12 07:19:33] 2025-10-11 20:19:28,093 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130601648514880)>', '<ExcThread(monitor, started 130601029990144)>']
[2025-10-12 07:19:33] 2025-10-11 20:19:28,550 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 07:19:33] 2025-10-11 20:19:28,551 | INFO     | [monitor] control thread has ended
[2025-10-12 07:19:33] 2025-10-11 20:19:33,114 | INFO     | all workflow threads have been joined
[2025-10-12 07:19:33] 2025-10-11 20:19:33,114 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 07:19:33] 2025-10-11 20:19:33,114 | INFO     | traces error code: 0
[2025-10-12 07:19:33] 2025-10-11 20:19:33,114 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 07:19:33] 2025-10-11 20:19:33,175 [wrapper] ==== pilot stdout END ====
[2025-10-12 07:19:33] 2025-10-11 20:19:33,177 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 07:19:33] 2025-10-11 20:19:33,179 [wrapper] pilotpid: 2981642
[2025-10-12 07:19:33] 2025-10-11 20:19:33,180 [wrapper] Pilot exit status: 0
[2025-10-12 07:19:33] 2025-10-11 20:19:33,187 [wrapper] pandaids: 6838200258
[2025-10-12 07:19:33] 2025-10-11 20:19:33,210 [wrapper] cleanup supervisor_pilot 3094565 2981643
[2025-10-12 07:19:33] 2025-10-11 20:19:33,212 [wrapper] Test setup, not cleaning
[2025-10-12 07:19:33] 2025-10-11 20:19:33,214 [wrapper] apfmon messages muted
[2025-10-12 07:19:33] 2025-10-11 20:19:33,215 [wrapper] ==== wrapper stdout END ====
[2025-10-12 07:19:33] 2025-10-11 20:19:33,216 [wrapper] ==== wrapper stderr END ====
[2025-10-12 07:19:33]  *** Error codes and diagnostics ***
[2025-10-12 07:19:33]     "exeErrorCode": 0,
[2025-10-12 07:19:33]     "exeErrorDiag": "",
[2025-10-12 07:19:33]     "pilotErrorCode": 0,
[2025-10-12 07:19:33]     "pilotErrorDiag": "",
[2025-10-12 07:19:33]  *** Listing of results directory ***
[2025-10-12 07:19:33] total 423564
[2025-10-12 07:19:33] -rw-r--r-- 1 michael michael    557409 Oct 11 18:53 pilot3.tar.gz
[2025-10-12 07:19:33] -rw-r--r-- 1 michael michael      5112 Oct 11 18:57 queuedata.json
[2025-10-12 07:19:33] -rwx------ 1 michael michael     36292 Oct 11 18:58 runpilot2-wrapper.sh
[2025-10-12 07:19:33] -rw-rw-r-- 1 michael michael       100 Oct 12 05:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 07:19:33] -rwxr-xr-x 1 michael michael      7986 Oct 12 05:24 run_atlas
[2025-10-12 07:19:33] -rw-rw-r-- 1 michael michael       105 Oct 12 05:24 job.xml
[2025-10-12 07:19:33] -rw-r--r-- 2 michael michael 222703324 Oct 12 05:24 EVNT.46676267._002164.pool.root.1
[2025-10-12 07:19:33] -rw-rw-r-- 1 michael michael      9816 Oct 12 05:24 init_data.xml
[2025-10-12 07:19:33] drwxrwx--x 2 michael michael      4096 Oct 12 05:24 shared
[2025-10-12 07:19:33] -rw-r--r-- 2 michael michael    569678 Oct 12 05:24 input.tar.gz
[2025-10-12 07:19:33] -rw-r--r-- 2 michael michael     15120 Oct 12 05:24 start_atlas.sh
[2025-10-12 07:19:33] -rw-rw-r-- 1 michael michael         0 Oct 12 05:24 boinc_lockfile
[2025-10-12 07:19:33] -rw-rw-r-- 1 michael michael      2550 Oct 12 05:24 pandaJob.out
[2025-10-12 07:19:33] -rw------- 1 michael michael    975520 Oct 12 05:24 agis_schedconf.cvmfs.json
[2025-10-12 07:19:33] -rw------- 1 michael michael   1560580 Oct 12 05:24 agis_ddmendpoints.agis.ALL.json
[2025-10-12 07:19:33] drwx------ 5 michael michael      4096 Oct 12 05:24 pilot3
[2025-10-12 07:19:33] -rw-rw-r-- 1 michael michael       529 Oct 12 07:18 boinc_task_state.xml
[2025-10-12 07:19:33] -rw------- 1 michael michael 204494746 Oct 12 07:18 HITS.46676269._053924.pool.root.1
[2025-10-12 07:19:33] -rw------- 1 michael michael        95 Oct 12 07:18 pilot_heartbeat.json
[2025-10-12 07:19:33] -rw------- 1 michael michael      1022 Oct 12 07:18 memory_monitor_summary.json
[2025-10-12 07:19:33] -rw------- 1 michael michael    296589 Oct 12 07:18 log.46676269._053924.job.log.tgz.1
[2025-10-12 07:19:33] -rw------- 1 michael michael      7726 Oct 12 07:18 heartbeat.json
[2025-10-12 07:19:33] -rw-rw-r-- 1 michael michael      8192 Oct 12 07:19 boinc_mmap_file
[2025-10-12 07:19:33] -rw-rw-r-- 1 michael michael        27 Oct 12 07:19 wrapper_checkpoint.txt
[2025-10-12 07:19:33] -rw------- 1 michael michael      5093 Oct 12 07:19 pilotlog.txt
[2025-10-12 07:19:33] -rw------- 1 michael michael   1015104 Oct 12 07:19 log.46676269._053924.job.log.1
[2025-10-12 07:19:33] -rw------- 1 michael michael       357 Oct 12 07:19 output.list
[2025-10-12 07:19:33] -rw-rw-r-- 1 michael michael       620 Oct 12 07:19 runtime_log
[2025-10-12 07:19:33] -rw------- 1 michael michael   1331200 Oct 12 07:19 result.tar.gz
[2025-10-12 07:19:33] -rw-rw-r-- 1 michael michael      8797 Oct 12 07:19 runtime_log.err
[2025-10-12 07:19:33] -rw------- 1 michael michael       641 Oct 12 07:19 5JqNDmifjR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRpfNDmS73hkn.diag
[2025-10-12 07:19:33] -rw-rw-r-- 1 michael michael     20807 Oct 12 07:19 stderr.txt
[2025-10-12 07:19:33] HITS file was successfully produced:
[2025-10-12 07:19:33] -rw------- 1 michael michael 204494746 Oct 12 07:18 shared/HITS.pool.root.1
[2025-10-12 07:19:33]  *** Contents of shared directory: ***
[2025-10-12 07:19:33] total 419072
[2025-10-12 07:19:33] -rw-r--r-- 2 michael michael 222703324 Oct 12 05:24 ATLAS.root_0
[2025-10-12 07:19:33] -rw-r--r-- 2 michael michael    569678 Oct 12 05:24 input.tar.gz
[2025-10-12 07:19:33] -rw-r--r-- 2 michael michael     15120 Oct 12 05:24 start_atlas.sh
[2025-10-12 07:19:33] -rw------- 1 michael michael 204494746 Oct 12 07:18 HITS.pool.root.1
[2025-10-12 07:19:33] -rw------- 1 michael michael   1331200 Oct 12 07:19 result.tar.gz
07:19:34 (2975915): run_atlas exited; CPU time 26355.192942
07:19:34 (2975915): called boinc_finish(0)

</stderr_txt>
]]>

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