Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:49:00 (2505165): wrapper (7.7.26015): starting
06:49:00 (2505165): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 06:49:00] Arguments: --nthreads 4
[2025-10-12 06:49:00] Threads: 4
[2025-10-12 06:49:00] Checking for CVMFS
[2025-10-12 06:49:00] No cvmfs_config command found, will try listing directly
[2025-10-12 06:49:00] CVMFS is ok
[2025-10-12 06:49:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 06:49:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 06:49:00] Further information can be found at the LHC@home message board.
[2025-10-12 06:49:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 06:49:00] Checking for apptainer binary...
[2025-10-12 06:49:00] which: no apptainer in ((null))
[2025-10-12 06:49:00] apptainer is not installed, using version from CVMFS
[2025-10-12 06:49:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 06:49:00] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2025-10-12 06:49:00] apptainer works
[2025-10-12 06:49:00] Set ATHENA_PROC_NUMBER=4
[2025-10-12 06:49:00] Set ATHENA_CORE_NUMBER=4
[2025-10-12 06:49:00] Starting ATLAS job with PandaID=6838118316
[2025-10-12 06:49:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 10:18:04]  *** The last 200 lines of the pilot log: ***
[2025-10-12 10:18:04] 2025-10-12 07:45:30,553 | INFO     | time since job start (10580s) is within the limit (172800.0s)
[2025-10-12 10:18:04] 2025-10-12 07:45:31,413 | INFO     | monitor loop #769: job 0:6838118316 is in state 'finished'
[2025-10-12 10:18:04] 2025-10-12 07:45:31,414 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:18:04] 2025-10-12 07:45:32,399 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 10:18:04] 2025-10-12 07:45:32,409 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2725.4216249999995
[2025-10-12 10:18:04] 2025-10-12 07:45:32,420 | INFO     | using path: /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6838118316/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 10:18:04] 2025-10-12 07:45:32,421 | INFO     | extracted standard info from prmon json
[2025-10-12 10:18:04] 2025-10-12 07:45:32,421 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 10:18:04] 2025-10-12 07:45:32,421 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 10:18:04] 2025-10-12 07:45:32,421 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 10:18:04] 2025-10-12 07:45:32,422 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 10:18:04] 2025-10-12 07:45:32,425 | INFO     | fitting pss+swap vs Time
[2025-10-12 10:18:04] 2025-10-12 07:45:32,425 | INFO     | sum of square deviations: 1605470102.0
[2025-10-12 10:18:04] 2025-10-12 07:45:32,426 | INFO     | sum of deviations: 17448430178.999985
[2025-10-12 10:18:04] 2025-10-12 07:45:32,427 | INFO     | mean x: 1760249823.0
[2025-10-12 10:18:04] 2025-10-12 07:45:32,427 | INFO     | mean y: 2327505.6878612717
[2025-10-12 10:18:04] 2025-10-12 07:45:32,427 | INFO     | -- intersect: -19128266141.58803
[2025-10-12 10:18:04] 2025-10-12 07:45:32,427 | INFO     | intersect: -19128266141.58803
[2025-10-12 10:18:04] 2025-10-12 07:45:32,427 | INFO     | chi2: 1.3653835810045043
[2025-10-12 10:18:04] 2025-10-12 07:45:32,427 | INFO     | sum of square deviations: 1470248962.0
[2025-10-12 10:18:04] 2025-10-12 07:45:32,428 | INFO     | sum of deviations: 16869542588.500004
[2025-10-12 10:18:04] 2025-10-12 07:45:32,428 | INFO     | mean x: 1760249670.5
[2025-10-12 10:18:04] 2025-10-12 07:45:32,429 | INFO     | mean y: 2326852.8035714286
[2025-10-12 10:18:04] 2025-10-12 07:45:32,429 | INFO     | -- intersect: -20194665323.6091
[2025-10-12 10:18:04] 2025-10-12 07:45:32,429 | INFO     | intersect: -20194665323.6091
[2025-10-12 10:18:04] 2025-10-12 07:45:32,429 | INFO     | chi2: 1.366535599398887
[2025-10-12 10:18:04] 2025-10-12 07:45:32,429 | INFO     | current chi2=1.366535599398887 (change=-0.08437324209913179 %)
[2025-10-12 10:18:04] 2025-10-12 07:45:32,429 | INFO     | right removable region: 167
[2025-10-12 10:18:04] 2025-10-12 07:45:32,429 | INFO     | sum of square deviations: 1470248962.0
[2025-10-12 10:18:04] 2025-10-12 07:45:32,430 | INFO     | sum of deviations: -5610609566.0
[2025-10-12 10:18:04] 2025-10-12 07:45:32,430 | INFO     | mean x: 1760249975.5
[2025-10-12 10:18:04] 2025-10-12 07:45:32,430 | INFO     | mean y: 2353150.511904762
[2025-10-12 10:18:04] 2025-10-12 07:45:32,431 | INFO     | -- intersect: 6719634105.199336
[2025-10-12 10:18:04] 2025-10-12 07:45:32,431 | INFO     | intersect: 6719634105.199336
[2025-10-12 10:18:04] 2025-10-12 07:45:32,431 | INFO     | chi2: 0.014798560888220088
[2025-10-12 10:18:04] 2025-10-12 07:45:32,431 | INFO     | current chi2=0.014798560888220088 (change=98.91616091667566 %)
[2025-10-12 10:18:04] 2025-10-12 07:45:32,431 | INFO     | sum of square deviations: 1342841922.0
[2025-10-12 10:18:04] 2025-10-12 07:45:32,432 | INFO     | sum of deviations: -4420642733.0
[2025-10-12 10:18:04] 2025-10-12 07:45:32,432 | INFO     | mean x: 1760250128.0
[2025-10-12 10:18:04] 2025-10-12 07:45:32,432 | INFO     | mean y: 2351720.5398773006
[2025-10-12 10:18:04] 2025-10-12 07:45:32,432 | INFO     | -- intersect: 5797104482.663965
[2025-10-12 10:18:04] 2025-10-12 07:45:32,432 | INFO     | intersect: 5797104482.663965
[2025-10-12 10:18:04] 2025-10-12 07:45:32,433 | INFO     | chi2: 0.01394312339177994
[2025-10-12 10:18:04] 2025-10-12 07:45:32,433 | INFO     | current chi2=0.01394312339177994 (change=5.78054516855819 %)
[2025-10-12 10:18:04] 2025-10-12 07:45:32,433 | INFO     | left removable region: 20
[2025-10-12 10:18:04] 2025-10-12 07:45:32,433 | INFO     | sum of square deviations: 984941258.0
[2025-10-12 10:18:04] 2025-10-12 07:45:32,434 | INFO     | sum of deviations: -1002811696.0000002
[2025-10-12 10:18:04] 2025-10-12 07:45:32,434 | INFO     | mean x: 1760250250.0
[2025-10-12 10:18:04] 2025-10-12 07:45:32,434 | INFO     | mean y: 2347044.149659864
[2025-10-12 10:18:04] 2025-10-12 07:45:32,434 | INFO     | -- intersect: 1794534673.868106
[2025-10-12 10:18:04] 2025-10-12 07:45:32,434 | INFO     | intersect: 1794534673.868106
[2025-10-12 10:18:04] 2025-10-12 07:45:32,435 | INFO     | chi2: 0.007029915858330132
[2025-10-12 10:18:04] 2025-10-12 07:45:32,435 | INFO     | -- intersect: 1794534673.868106
[2025-10-12 10:18:04] 2025-10-12 07:45:32,435 | INFO     | current memory leak: -1.02 B/s (using 147 data points, chi2=0.01)
[2025-10-12 10:18:04] 2025-10-12 07:45:32,435 | INFO     | could have reported an average CPU frequency of 2693 MHz (9 samples)
[2025-10-12 10:18:04] 2025-10-12 07:45:32,435 | INFO     | ..............................
[2025-10-12 10:18:04] 2025-10-12 07:45:32,435 | INFO     | . Timing measurements:
[2025-10-12 10:18:04] 2025-10-12 07:45:32,436 | INFO     | . get job = 0 s
[2025-10-12 10:18:04] 2025-10-12 07:45:32,436 | INFO     | . initial setup = 1 s
[2025-10-12 10:18:04] 2025-10-12 07:45:32,436 | INFO     | . payload setup = 5 s
[2025-10-12 10:18:04] 2025-10-12 07:45:32,436 | INFO     | . stage-in = 0 s
[2025-10-12 10:18:04] 2025-10-12 07:45:32,436 | INFO     | . payload execution = 10547 s
[2025-10-12 10:18:04] 2025-10-12 07:45:32,436 | INFO     | . stage-out = 0 s
[2025-10-12 10:18:04] 2025-10-12 07:45:32,436 | INFO     | . log creation = 0 s
[2025-10-12 10:18:04] 2025-10-12 07:45:32,436 | INFO     | ..............................
[2025-10-12 10:18:04] 2025-10-12 07:45:32,531 | INFO     | 
[2025-10-12 10:18:04] 2025-10-12 07:45:32,532 | INFO     | job summary report
[2025-10-12 10:18:04] 2025-10-12 07:45:32,532 | INFO     | --------------------------------------------------
[2025-10-12 10:18:04] 2025-10-12 07:45:32,532 | INFO     | PanDA job id: 6838118316
[2025-10-12 10:18:04] 2025-10-12 07:45:32,532 | INFO     | task id: 46676269
[2025-10-12 10:18:04] 2025-10-12 07:45:32,532 | INFO     | errors: (none)
[2025-10-12 10:18:04] 2025-10-12 07:45:32,532 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 10:18:04] 2025-10-12 07:45:32,532 | INFO     | pilot state: finished 
[2025-10-12 10:18:04] 2025-10-12 07:45:32,532 | INFO     | transexitcode: 0
[2025-10-12 10:18:04] 2025-10-12 07:45:32,532 | INFO     | exeerrorcode: 0
[2025-10-12 10:18:04] 2025-10-12 07:45:32,532 | INFO     | exeerrordiag: 
[2025-10-12 10:18:04] 2025-10-12 07:45:32,533 | INFO     | exitcode: 0
[2025-10-12 10:18:04] 2025-10-12 07:45:32,533 | INFO     | exitmsg: OK
[2025-10-12 10:18:04] 2025-10-12 07:45:32,533 | INFO     | cpuconsumptiontime: 40645 s
[2025-10-12 10:18:04] 2025-10-12 07:45:32,533 | INFO     | nevents: 400
[2025-10-12 10:18:04] 2025-10-12 07:45:32,533 | INFO     | neventsw: 0
[2025-10-12 10:18:04] 2025-10-12 07:45:32,533 | INFO     | pid: 2545563
[2025-10-12 10:18:04] 2025-10-12 07:45:32,533 | INFO     | pgrp: 2545563
[2025-10-12 10:18:04] 2025-10-12 07:45:32,533 | INFO     | corecount: 4
[2025-10-12 10:18:04] 2025-10-12 07:45:32,533 | INFO     | event service: False
[2025-10-12 10:18:04] 2025-10-12 07:45:32,533 | INFO     | sizes: {0: 2348697, 1: 2348896, 5: 2349158, 11: 2349214, 10557: 2378048, 10558: 2387068, 10561: 2387252, 10567: 2387510}
[2025-10-12 10:18:04] 2025-10-12 07:45:32,533 | INFO     | --------------------------------------------------
[2025-10-12 10:18:04] 2025-10-12 07:45:32,533 | INFO     | 
[2025-10-12 10:18:04] 2025-10-12 07:45:32,533 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/0
[2025-10-12 10:18:04] 2025-10-12 07:45:32,555 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 10:18:04] 2025-10-12 07:45:32,555 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 10:18:04] 2025-10-12 07:45:32,556 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 10:18:04] 2025-10-12 07:45:32,556 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 10:18:04] 2025-10-12 07:45:32,556 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 10:18:04] 2025-10-12 07:45:32,556 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 10:18:04] 2025-10-12 07:45:32,556 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 10:18:04] 2025-10-12 07:45:32,556 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 10:18:04] 2025-10-12 07:45:32,556 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 10:18:04] 2025-10-12 07:45:32,556 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 10:18:04] 2025-10-12 07:45:32,556 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 10:18:04] 2025-10-12 07:45:32,556 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 10:18:04] 2025-10-12 07:45:32,556 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 10:18:04] 2025-10-12 07:45:32,556 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 10:18:04] 2025-10-12 07:45:32,557 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 10:18:04] 2025-10-12 07:45:32,557 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 10:18:04] 2025-10-12 07:45:32,557 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 10:18:04] 2025-10-12 07:45:32,557 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 10:18:04] 2025-10-12 07:45:32,557 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 10:18:04] 2025-10-12 07:45:32,557 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 10:18:04] 2025-10-12 07:45:32,557 | INFO     | job 6838118316 has completed (purged errors)
[2025-10-12 10:18:04] 2025-10-12 07:45:32,557 | INFO     | overall cleanup function is called
[2025-10-12 10:18:04] 2025-10-12 07:45:33,564 | INFO     | --- collectZombieJob: --- 10, [2545563]
[2025-10-12 10:18:04] 2025-10-12 07:45:33,565 | INFO     | zombie collector waiting for pid 2545563
[2025-10-12 10:18:04] 2025-10-12 07:45:33,565 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 10:18:04] 2025-10-12 07:45:33,565 | INFO     | collected zombie processes
[2025-10-12 10:18:04] 2025-10-12 07:45:33,565 | INFO     | will attempt to kill all subprocesses of pid=2545563
[2025-10-12 10:18:04] 2025-10-12 07:45:33,936 | INFO     | process IDs to be killed: [2545563] (in reverse order)
[2025-10-12 10:18:04] 2025-10-12 07:45:34,046 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 10:18:04] 2025-10-12 07:45:34,047 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 10:18:04] 2025-10-12 07:45:34,059 | INFO     | did not find any defunct processes belonging to 2545563
[2025-10-12 10:18:04] 2025-10-12 07:45:34,071 | INFO     | did not find any defunct processes belonging to 2545563
[2025-10-12 10:18:04] 2025-10-12 07:45:34,071 | INFO     | ready for new job
[2025-10-12 10:18:04] 2025-10-12 07:45:34,071 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 10:18:04] 2025-10-12 07:45:34,073 | INFO     | ***************************************
[2025-10-12 10:18:04] 2025-10-12 07:45:34,073 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 10:18:04] 2025-10-12 07:45:34,074 | INFO     | ***************************************
[2025-10-12 10:18:04] 2025-10-12 07:45:34,074 | INFO     | 
[2025-10-12 10:18:04] 2025-10-12 07:45:34,077 | INFO     | architecture information:
[2025-10-12 10:18:04] 2025-10-12 07:45:34,078 | INFO     | executing command: cat /etc/os-release
[2025-10-12 10:18:04] 2025-10-12 07:45:34,094 | INFO     | cat /etc/os-release:
[2025-10-12 10:18:04] NAME="CentOS Linux"
[2025-10-12 10:18:04] VERSION="7 (Core)"
[2025-10-12 10:18:04] ID="centos"
[2025-10-12 10:18:04] ID_LIKE="rhel fedora"
[2025-10-12 10:18:04] VERSION_ID="7"
[2025-10-12 10:18:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 10:18:04] ANSI_COLOR="0;31"
[2025-10-12 10:18:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 10:18:04] HOME_URL="https://www.centos.org/"
[2025-10-12 10:18:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 10:18:04] 
[2025-10-12 10:18:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 10:18:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 10:18:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 10:18:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 10:18:04] 
[2025-10-12 10:18:04] 2025-10-12 07:45:34,095 | INFO     | ***************************************
[2025-10-12 10:18:04] 2025-10-12 07:45:34,598 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/0
[2025-10-12 10:18:04] 2025-10-12 07:45:34,614 | INFO     | sufficient remaining disk space (693215690752 B)
[2025-10-12 10:18:04] 2025-10-12 07:45:34,614 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 10:18:04] 2025-10-12 07:45:34,614 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 10:18:04] 2025-10-12 07:45:34,614 | INFO     | update_server=False
[2025-10-12 10:18:04] 2025-10-12 07:45:34,614 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 10:18:04] 2025-10-12 07:45:34,615 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 10:18:04] 2025-10-12 07:45:34,922 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:18:04] 2025-10-12 07:45:34,922 | INFO     | aborting loop
[2025-10-12 10:18:04] 2025-10-12 07:45:35,146 | INFO     | all payload control threads have been joined
[2025-10-12 10:18:04] 2025-10-12 07:45:35,620 | INFO     | [job] retrieve thread has finished
[2025-10-12 10:18:04] 2025-10-12 07:45:35,638 | INFO     | all data control threads have been joined
[2025-10-12 10:18:04] 2025-10-12 07:45:35,868 | INFO     | [job] validate thread has finished
[2025-10-12 10:18:04] 2025-10-12 07:45:35,927 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 10:18:04] 2025-10-12 07:45:35,927 | INFO     | [job] job monitor thread has finished
[2025-10-12 10:18:04] 2025-10-12 07:45:35,958 | INFO     | [data] copytool_in thread has finished
[2025-10-12 10:18:04] 2025-10-12 07:45:36,002 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 10:18:04] 2025-10-12 07:45:36,056 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 10:18:04] 2025-10-12 07:45:36,151 | INFO     | [payload] control thread has finished
[2025-10-12 10:18:04] 2025-10-12 07:45:36,241 | INFO     | all job control threads have been joined
[2025-10-12 10:18:04] 2025-10-12 07:45:36,416 | INFO     | [payload] failed_post thread has finished
[2025-10-12 10:18:04] 2025-10-12 07:45:36,459 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 10:18:04] 2025-10-12 07:45:36,620 | INFO     | [data] copytool_out thread has finished
[2025-10-12 10:18:04] 2025-10-12 07:45:36,644 | INFO     | [data] control thread has finished
[2025-10-12 10:18:04] 2025-10-12 07:45:36,919 | INFO     | [payload] validate_post thread has finished
[2025-10-12 10:18:04] 2025-10-12 07:45:37,181 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 10:18:04] 2025-10-12 07:45:37,246 | INFO     | [job] control thread has finished
[2025-10-12 10:18:04] 2025-10-12 07:45:37,541 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:18:04] 2025-10-12 07:45:38,547 | INFO     | [job] queue monitor thread has finished
[2025-10-12 10:18:04] 2025-10-12 07:45:41,187 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 10:18:04] 2025-10-12 07:46:04,116 | INFO     | PID=2516417 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 10:18:04] 2025-10-12 07:46:04,116 | INFO     | .. there are 5 such processes running
[2025-10-12 10:18:04] 2025-10-12 07:46:04,116 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 10:18:04] 2025-10-12 07:46:04,117 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 10:18:04] 2025-10-12 07:46:04,117 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 10:18:04] 2025-10-12 07:46:27,198 | INFO     | [monitor] cgroup control has ended
[2025-10-12 10:18:04] 2025-10-12 07:46:27,521 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23110685636416)>', '<ExcThread(monitor, started 23110447232768)>']
[2025-10-12 10:18:04] 2025-10-12 07:46:28,222 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 10:18:04] 2025-10-12 07:46:28,222 | INFO     | [monitor] control thread has ended
[2025-10-12 10:18:04] 2025-10-12 07:46:32,530 | INFO     | all workflow threads have been joined
[2025-10-12 10:18:04] 2025-10-12 07:46:32,530 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 10:18:04] 2025-10-12 07:46:32,530 | INFO     | traces error code: 0
[2025-10-12 10:18:04] 2025-10-12 07:46:32,530 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 10:18:04] 2025-10-12 07:46:32,672 [wrapper] ==== pilot stdout END ====
[2025-10-12 10:18:04] 2025-10-12 07:46:32,675 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 10:18:04] 2025-10-12 07:46:32,678 [wrapper] pilotpid: 2516417
[2025-10-12 10:18:04] 2025-10-12 07:46:32,681 [wrapper] Pilot exit status: 0
[2025-10-12 10:18:04] 2025-10-12 07:46:32,689 [wrapper] pandaids: 6838118316
[2025-10-12 10:18:04] 2025-10-12 07:46:32,761 [wrapper] cleanup supervisor_pilot 2748058 2516418
[2025-10-12 10:18:04] 2025-10-12 07:46:32,764 [wrapper] Test setup, not cleaning
[2025-10-12 10:18:04] 2025-10-12 07:46:32,767 [wrapper] apfmon messages muted
[2025-10-12 10:18:04] 2025-10-12 07:46:32,770 [wrapper] ==== wrapper stdout END ====
[2025-10-12 10:18:04] 2025-10-12 07:46:32,773 [wrapper] ==== wrapper stderr END ====
[2025-10-12 10:18:04]  *** Error codes and diagnostics ***
[2025-10-12 10:18:04]     "exeErrorCode": 0,
[2025-10-12 10:18:04]     "exeErrorDiag": "",
[2025-10-12 10:18:04]     "pilotErrorCode": 0,
[2025-10-12 10:18:04]     "pilotErrorDiag": "",
[2025-10-12 10:18:04]  *** Listing of results directory ***
[2025-10-12 10:18:04] total 413076
[2025-10-12 10:18:04] -rw-r--r-- 1 boinc boinc    557409 Oct 11 07:36 pilot3.tar.gz
[2025-10-12 10:18:04] -rw-r--r-- 1 boinc boinc      5112 Oct 11 07:43 queuedata.json
[2025-10-12 10:18:04] -rwx------ 1 boinc boinc     36292 Oct 11 07:43 runpilot2-wrapper.sh
[2025-10-12 10:18:04] -rw-r--r-- 1 boinc boinc       100 Oct 12 06:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 10:18:04] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 06:48 run_atlas
[2025-10-12 10:18:04] -rw-r--r-- 1 boinc boinc       105 Oct 12 06:48 job.xml
[2025-10-12 10:18:04] -rw-r--r-- 1 boinc boinc      6634 Oct 12 06:49 init_data.xml
[2025-10-12 10:18:04] -rw-r--r-- 2 boinc boinc 221435161 Oct 12 06:49 EVNT.46676267._002098.pool.root.1
[2025-10-12 10:18:04] -rw-r--r-- 2 boinc boinc     15120 Oct 12 06:49 start_atlas.sh
[2025-10-12 10:18:04] drwxrwx--x 2 boinc boinc      4096 Oct 12 06:49 shared
[2025-10-12 10:18:04] -rw-r--r-- 2 boinc boinc    569679 Oct 12 06:49 input.tar.gz
[2025-10-12 10:18:04] -rw-r--r-- 1 boinc boinc         0 Oct 12 06:49 boinc_lockfile
[2025-10-12 10:18:04] -rw-r--r-- 1 boinc boinc      2550 Oct 12 06:49 pandaJob.out
[2025-10-12 10:18:04] -rw------- 1 boinc boinc    975512 Oct 12 06:49 agis_schedconf.cvmfs.json
[2025-10-12 10:18:04] -rw------- 1 boinc boinc   1560580 Oct 12 06:49 agis_ddmendpoints.agis.ALL.json
[2025-10-12 10:18:04] drwx------ 5 boinc boinc      4096 Oct 12 06:49 pilot3
[2025-10-12 10:18:04] -rw------- 1 boinc boinc 193931336 Oct 12 09:44 HITS.46676269._052203.pool.root.1
[2025-10-12 10:18:04] -rw-r--r-- 1 boinc boinc       527 Oct 12 09:45 boinc_task_state.xml
[2025-10-12 10:18:04] -rw------- 1 boinc boinc      1033 Oct 12 09:45 memory_monitor_summary.json
[2025-10-12 10:18:04] -rw------- 1 boinc boinc        95 Oct 12 09:45 pilot_heartbeat.json
[2025-10-12 10:18:04] -rw------- 1 boinc boinc    354506 Oct 12 09:45 log.46676269._052203.job.log.tgz.1
[2025-10-12 10:18:04] -rw------- 1 boinc boinc      7824 Oct 12 09:45 heartbeat.json
[2025-10-12 10:18:04] -rw------- 1 boinc boinc      4833 Oct 12 09:46 pilotlog.txt
[2025-10-12 10:18:04] -rw------- 1 boinc boinc   1505072 Oct 12 09:46 log.46676269._052203.job.log.1
[2025-10-12 10:18:04] -rw------- 1 boinc boinc       357 Oct 12 09:46 output.list
[2025-10-12 10:18:04] -rw-r--r-- 1 boinc boinc       620 Oct 12 09:46 runtime_log
[2025-10-12 10:18:04] -rw------- 1 boinc boinc   1873920 Oct 12 09:46 result.tar.gz
[2025-10-12 10:18:04] -rw------- 1 boinc boinc       665 Oct 12 09:46 sPtLDmPZhR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmaXfNDmY5NfQn.diag
[2025-10-12 10:18:04] -rw-r--r-- 1 boinc boinc      9070 Oct 12 09:46 runtime_log.err
[2025-10-12 10:18:04] -rw-r--r-- 1 boinc boinc        25 Oct 12 10:17 wrapper_checkpoint.txt
[2025-10-12 10:18:04] -rw-r--r-- 1 boinc boinc      8192 Oct 12 10:18 boinc_mmap_file
[2025-10-12 10:18:04] -rw-r--r-- 1 boinc boinc     20924 Oct 12 10:18 stderr.txt
[2025-10-12 10:18:04] HITS file was successfully produced:
[2025-10-12 10:18:04] -rw------- 1 boinc boinc 193931336 Oct 12 09:44 shared/HITS.pool.root.1
[2025-10-12 10:18:04]  *** Contents of shared directory: ***
[2025-10-12 10:18:04] total 408052
[2025-10-12 10:18:04] -rw-r--r-- 2 boinc boinc 221435161 Oct 12 06:49 ATLAS.root_0
[2025-10-12 10:18:04] -rw-r--r-- 2 boinc boinc     15120 Oct 12 06:49 start_atlas.sh
[2025-10-12 10:18:04] -rw-r--r-- 2 boinc boinc    569679 Oct 12 06:49 input.tar.gz
[2025-10-12 10:18:04] -rw------- 1 boinc boinc 193931336 Oct 12 09:44 HITS.pool.root.1
[2025-10-12 10:18:04] -rw------- 1 boinc boinc   1873920 Oct 12 09:46 result.tar.gz
10:18:05 (2505165): run_atlas exited; CPU time 41089.568798
10:18:05 (2505165): called boinc_finish(0)

</stderr_txt>
]]>

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