Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:55:50 (3740488): wrapper (7.7.26015): starting
09:55:50 (3740488): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 09:55:50] Arguments: --nthreads 8
[2025-10-11 09:55:50] Threads: 8
[2025-10-11 09:55:50] Checking for CVMFS
[2025-10-11 09:55:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 09:55:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 09:55:51] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 09:55:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 09:55:52] 2.13.2.0 2533812 127889 315628 151585 3 656 28225897 32935936 47684 16776704 0 364773502 99.694 276565572 19938 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 09:55:52] CVMFS is ok
[2025-10-11 09:55:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 09:55:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 09:55:52] Further information can be found at the LHC@home message board.
[2025-10-11 09:55:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 09:55:52] Checking for apptainer binary...
[2025-10-11 09:55:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 09:55:52] Running /usr/bin/apptainer --version
[2025-10-11 09:55:53] apptainer version 1.4.3-1.el9
[2025-10-11 09:55:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 09:55:53] c6-12-29-3.aglt2.org
[2025-10-11 09:55:53] apptainer works
[2025-10-11 09:55:53] Set ATHENA_PROC_NUMBER=8
[2025-10-11 09:55:53] Set ATHENA_CORE_NUMBER=8
[2025-10-11 09:55:54] Starting ATLAS job with PandaID=6838199949
[2025-10-11 09:55:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 16:39:35]  *** The last 200 lines of the pilot log: ***
[2025-10-11 16:39:35] 2025-10-11 20:38:10,000 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 16:39:35] 2025-10-11 20:38:10,000 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 16:39:35] 2025-10-11 20:38:10,000 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 16:39:35] 2025-10-11 20:38:10,060 | INFO     | fitting pss+swap vs Time
[2025-10-11 16:39:35] 2025-10-11 20:38:10,100 | INFO     | sum of square deviations: 18535270980.91046
[2025-10-11 16:39:35] 2025-10-11 20:38:10,104 | INFO     | sum of deviations: 155257421487.21228
[2025-10-11 16:39:35] 2025-10-11 20:38:10,105 | INFO     | mean x: 1760203108.258312
[2025-10-11 16:39:35] 2025-10-11 20:38:10,105 | INFO     | mean y: 2063213.4731457802
[2025-10-11 16:39:35] 2025-10-11 20:38:10,105 | INFO     | -- intersect: -14741967028.297724
[2025-10-11 16:39:35] 2025-10-11 20:38:10,105 | INFO     | intersect: -14741967028.297724
[2025-10-11 16:39:35] 2025-10-11 20:38:10,129 | INFO     | chi2: 7.774160105775986
[2025-10-11 16:39:35] 2025-10-11 20:38:10,130 | INFO     | sum of square deviations: 17833270018.07249
[2025-10-11 16:39:35] 2025-10-11 20:38:10,161 | INFO     | sum of deviations: 199773044669.02594
[2025-10-11 16:39:35] 2025-10-11 20:38:10,161 | INFO     | mean x: 1760202955.761658
[2025-10-11 16:39:35] 2025-10-11 20:38:10,162 | INFO     | mean y: 2072816.7720207253
[2025-10-11 16:39:35] 2025-10-11 20:38:10,162 | INFO     | -- intersect: -19716189922.00595
[2025-10-11 16:39:35] 2025-10-11 20:38:10,162 | INFO     | intersect: -19716189922.00595
[2025-10-11 16:39:35] 2025-10-11 20:38:10,162 | INFO     | chi2: 6.318662065485704
[2025-10-11 16:39:35] 2025-10-11 20:38:10,163 | INFO     | current chi2=6.318662065485704 (change=18.722254500635866 %)
[2025-10-11 16:39:35] 2025-10-11 20:38:10,163 | INFO     | right removable region: 385
[2025-10-11 16:39:35] 2025-10-11 20:38:10,164 | INFO     | sum of square deviations: 17833208408.0725
[2025-10-11 16:39:35] 2025-10-11 20:38:10,198 | INFO     | sum of deviations: 54183236789.81864
[2025-10-11 16:39:35] 2025-10-11 20:38:10,199 | INFO     | mean x: 1760203260.761658
[2025-10-11 16:39:35] 2025-10-11 20:38:10,227 | INFO     | mean y: 2085146.5958549222
[2025-10-11 16:39:35] 2025-10-11 20:38:10,227 | INFO     | -- intersect: -5345999611.550491
[2025-10-11 16:39:35] 2025-10-11 20:38:10,227 | INFO     | intersect: -5345999611.550491
[2025-10-11 16:39:35] 2025-10-11 20:38:10,229 | INFO     | chi2: 4.1137398487731165
[2025-10-11 16:39:35] 2025-10-11 20:38:10,229 | INFO     | current chi2=4.1137398487731165 (change=47.08444651510687 %)
[2025-10-11 16:39:35] 2025-10-11 20:38:10,230 | INFO     | sum of square deviations: 17149169930.792618
[2025-10-11 16:39:35] 2025-10-11 20:38:10,233 | INFO     | sum of deviations: -62731690.490795135
[2025-10-11 16:39:35] 2025-10-11 20:38:10,234 | INFO     | mean x: 1760203413.257218
[2025-10-11 16:39:35] 2025-10-11 20:38:10,234 | INFO     | mean y: 2097215.17847769
[2025-10-11 16:39:35] 2025-10-11 20:38:10,234 | INFO     | -- intersect: 8536042.02356158
[2025-10-11 16:39:35] 2025-10-11 20:38:10,234 | INFO     | intersect: 8536042.02356158
[2025-10-11 16:39:35] 2025-10-11 20:38:10,235 | INFO     | chi2: 3.0253926912913993
[2025-10-11 16:39:35] 2025-10-11 20:38:10,235 | INFO     | current chi2=3.0253926912913993 (change=26.456392418842583 %)
[2025-10-11 16:39:35] 2025-10-11 20:38:10,235 | INFO     | sum of square deviations: 16482853323.997406
[2025-10-11 16:39:35] 2025-10-11 20:38:10,239 | INFO     | sum of deviations: -36422348209.74202
[2025-10-11 16:39:35] 2025-10-11 20:38:10,239 | INFO     | mean x: 1760203565.7526596
[2025-10-11 16:39:35] 2025-10-11 20:38:10,240 | INFO     | mean y: 2105535.9920212766
[2025-10-11 16:39:35] 2025-10-11 20:38:10,240 | INFO     | -- intersect: 3891647348.4240947
[2025-10-11 16:39:35] 2025-10-11 20:38:10,240 | INFO     | intersect: 3891647348.4240947
[2025-10-11 16:39:35] 2025-10-11 20:38:10,240 | INFO     | chi2: 2.5510004613689268
[2025-10-11 16:39:35] 2025-10-11 20:38:10,240 | INFO     | current chi2=2.5510004613689268 (change=15.680352216358948 %)
[2025-10-11 16:39:35] 2025-10-11 20:38:10,241 | INFO     | left removable region: 30
[2025-10-11 16:39:35] 2025-10-11 20:38:10,241 | INFO     | sum of square deviations: 13872437438.15775
[2025-10-11 16:39:35] 2025-10-11 20:38:10,244 | INFO     | sum of deviations: -48824459601.509865
[2025-10-11 16:39:35] 2025-10-11 20:38:10,245 | INFO     | mean x: 1760203840.259155
[2025-10-11 16:39:35] 2025-10-11 20:38:10,245 | INFO     | mean y: 2130035.233802817
[2025-10-11 16:39:35] 2025-10-11 20:38:10,245 | INFO     | -- intersect: 6197220239.985056
[2025-10-11 16:39:35] 2025-10-11 20:38:10,245 | INFO     | intersect: 6197220239.985056
[2025-10-11 16:39:35] 2025-10-11 20:38:10,245 | INFO     | chi2: 0.2246896669449979
[2025-10-11 16:39:35] 2025-10-11 20:38:10,246 | INFO     | -- intersect: 6197220239.985056
[2025-10-11 16:39:35] 2025-10-11 20:38:10,246 | INFO     | current memory leak: -3.52 B/s (using 355 data points, chi2=0.22)
[2025-10-11 16:39:35] 2025-10-11 20:38:10,247 | INFO     | could have reported an average CPU frequency of 2604 MHz (17 samples)
[2025-10-11 16:39:35] 2025-10-11 20:38:10,247 | INFO     | ..............................
[2025-10-11 16:39:35] 2025-10-11 20:38:10,247 | INFO     | . Timing measurements:
[2025-10-11 16:39:35] 2025-10-11 20:38:10,247 | INFO     | . get job = 0 s
[2025-10-11 16:39:35] 2025-10-11 20:38:10,247 | INFO     | . initial setup = 8 s
[2025-10-11 16:39:35] 2025-10-11 20:38:10,247 | INFO     | . payload setup = 50 s
[2025-10-11 16:39:35] 2025-10-11 20:38:10,247 | INFO     | . stage-in = 0 s
[2025-10-11 16:39:35] 2025-10-11 20:38:10,247 | INFO     | . payload execution = 23862 s
[2025-10-11 16:39:35] 2025-10-11 20:38:10,248 | INFO     | . stage-out = 5 s
[2025-10-11 16:39:35] 2025-10-11 20:38:10,248 | INFO     | . log creation = 1 s
[2025-10-11 16:39:35] 2025-10-11 20:38:10,248 | INFO     | ..............................
[2025-10-11 16:39:35] 2025-10-11 20:38:10,930 | INFO     | 
[2025-10-11 16:39:35] 2025-10-11 20:38:10,930 | INFO     | job summary report
[2025-10-11 16:39:35] 2025-10-11 20:38:10,930 | INFO     | --------------------------------------------------
[2025-10-11 16:39:35] 2025-10-11 20:38:10,931 | INFO     | PanDA job id: 6838199949
[2025-10-11 16:39:35] 2025-10-11 20:38:10,931 | INFO     | task id: 46676269
[2025-10-11 16:39:35] 2025-10-11 20:38:10,931 | INFO     | errors: (none)
[2025-10-11 16:39:35] 2025-10-11 20:38:10,931 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 16:39:35] 2025-10-11 20:38:10,931 | INFO     | pilot state: finished 
[2025-10-11 16:39:35] 2025-10-11 20:38:10,931 | INFO     | transexitcode: 0
[2025-10-11 16:39:35] 2025-10-11 20:38:10,931 | INFO     | exeerrorcode: 0
[2025-10-11 16:39:35] 2025-10-11 20:38:10,931 | INFO     | exeerrordiag: 
[2025-10-11 16:39:35] 2025-10-11 20:38:10,931 | INFO     | exitcode: 0
[2025-10-11 16:39:35] 2025-10-11 20:38:10,931 | INFO     | exitmsg: OK
[2025-10-11 16:39:35] 2025-10-11 20:38:10,931 | INFO     | cpuconsumptiontime: 47773 s
[2025-10-11 16:39:35] 2025-10-11 20:38:10,931 | INFO     | nevents: 400
[2025-10-11 16:39:35] 2025-10-11 20:38:10,932 | INFO     | neventsw: 0
[2025-10-11 16:39:35] 2025-10-11 20:38:10,932 | INFO     | pid: 3765274
[2025-10-11 16:39:35] 2025-10-11 20:38:10,932 | INFO     | pgrp: 3765274
[2025-10-11 16:39:35] 2025-10-11 20:38:10,932 | INFO     | corecount: 8
[2025-10-11 16:39:35] 2025-10-11 20:38:10,932 | INFO     | event service: False
[2025-10-11 16:39:35] 2025-10-11 20:38:10,932 | INFO     | sizes: {0: 2348029, 1: 2348630, 2: 2348714, 3: 2348770, 4: 2348941, 5: 2348969, 6: 2349153, 17: 2349181, 28: 2349209, 40: 2349237, 44: 2349527, 51: 2349835, 23919:
[2025-10-11 16:39:35] 2025-10-11 20:38:10,932 | INFO     | --------------------------------------------------
[2025-10-11 16:39:35] 2025-10-11 20:38:10,932 | INFO     | 
[2025-10-11 16:39:35] 2025-10-11 20:38:10,932 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 16:39:35] 2025-10-11 20:38:11,096 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 16:39:35] 2025-10-11 20:38:11,096 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 16:39:35] 2025-10-11 20:38:11,096 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 16:39:35] 2025-10-11 20:38:11,097 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 16:39:35] 2025-10-11 20:38:11,097 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 16:39:35] 2025-10-11 20:38:11,097 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 16:39:35] 2025-10-11 20:38:11,097 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 16:39:35] 2025-10-11 20:38:11,097 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 16:39:35] 2025-10-11 20:38:11,097 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 16:39:35] 2025-10-11 20:38:11,097 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 16:39:35] 2025-10-11 20:38:11,097 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 16:39:35] 2025-10-11 20:38:11,097 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 16:39:35] 2025-10-11 20:38:11,097 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 16:39:35] 2025-10-11 20:38:11,097 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 16:39:35] 2025-10-11 20:38:11,097 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 16:39:35] 2025-10-11 20:38:11,098 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 16:39:35] 2025-10-11 20:38:11,098 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 16:39:35] 2025-10-11 20:38:11,098 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 16:39:35] 2025-10-11 20:38:11,098 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 16:39:35] 2025-10-11 20:38:11,098 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 16:39:35] 2025-10-11 20:38:11,098 | INFO     | job 6838199949 has completed (purged errors)
[2025-10-11 16:39:35] 2025-10-11 20:38:11,098 | INFO     | overall cleanup function is called
[2025-10-11 16:39:35] 2025-10-11 20:38:12,123 | INFO     | --- collectZombieJob: --- 10, [3765274]
[2025-10-11 16:39:35] 2025-10-11 20:38:12,123 | INFO     | zombie collector waiting for pid 3765274
[2025-10-11 16:39:35] 2025-10-11 20:38:12,124 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 16:39:35] 2025-10-11 20:38:12,124 | INFO     | collected zombie processes
[2025-10-11 16:39:35] 2025-10-11 20:38:12,124 | INFO     | will attempt to kill all subprocesses of pid=3765274
[2025-10-11 16:39:35] 2025-10-11 20:38:13,973 | INFO     | process IDs to be killed: [3765274] (in reverse order)
[2025-10-11 16:39:35] 2025-10-11 20:38:14,352 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 16:39:35] 2025-10-11 20:38:14,352 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 16:39:35] 2025-10-11 20:38:14,377 | INFO     | did not find any defunct processes belonging to 3765274
[2025-10-11 16:39:35] 2025-10-11 20:38:14,401 | INFO     | did not find any defunct processes belonging to 3765274
[2025-10-11 16:39:35] 2025-10-11 20:38:14,401 | INFO     | ready for new job
[2025-10-11 16:39:35] 2025-10-11 20:38:14,402 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 16:39:35] 2025-10-11 20:38:14,404 | INFO     | ***************************************
[2025-10-11 16:39:35] 2025-10-11 20:38:14,404 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 16:39:35] 2025-10-11 20:38:14,405 | INFO     | ***************************************
[2025-10-11 16:39:35] 2025-10-11 20:38:14,405 | INFO     | 
[2025-10-11 16:39:35] 2025-10-11 20:38:14,429 | INFO     | architecture information:
[2025-10-11 16:39:35] 2025-10-11 20:38:14,434 | INFO     | executing command: cat /etc/os-release
[2025-10-11 16:39:35] 2025-10-11 20:38:14,559 | INFO     | cat /etc/os-release:
[2025-10-11 16:39:35] NAME="CentOS Linux"
[2025-10-11 16:39:35] VERSION="7 (Core)"
[2025-10-11 16:39:35] ID="centos"
[2025-10-11 16:39:35] ID_LIKE="rhel fedora"
[2025-10-11 16:39:35] VERSION_ID="7"
[2025-10-11 16:39:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 16:39:35] ANSI_COLOR="0;31"
[2025-10-11 16:39:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 16:39:35] HOME_URL="https://www.centos.org/"
[2025-10-11 16:39:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 16:39:35] 
[2025-10-11 16:39:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 16:39:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 16:39:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 16:39:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 16:39:35] 
[2025-10-11 16:39:35] 2025-10-11 20:38:14,560 | INFO     | ***************************************
[2025-10-11 16:39:35] 2025-10-11 20:38:15,063 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 16:39:35] 2025-10-11 20:38:15,196 | INFO     | sufficient remaining disk space (93860134912 B)
[2025-10-11 16:39:35] 2025-10-11 20:38:15,196 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 16:39:35] 2025-10-11 20:38:15,196 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 16:39:35] 2025-10-11 20:38:15,197 | INFO     | update_server=False
[2025-10-11 16:39:35] 2025-10-11 20:38:15,197 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 16:39:35] 2025-10-11 20:38:15,197 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 16:39:35] 2025-10-11 20:38:15,197 | INFO     | aborting loop
[2025-10-11 16:39:35] 2025-10-11 20:38:15,355 | INFO     | all payload control threads have been joined
[2025-10-11 16:39:35] 2025-10-11 20:38:15,593 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 16:39:35] 2025-10-11 20:38:15,659 | INFO     | all job control threads have been joined
[2025-10-11 16:39:35] 2025-10-11 20:38:16,163 | INFO     | all data control threads have been joined
[2025-10-11 16:39:35] 2025-10-11 20:38:16,202 | INFO     | [job] retrieve thread has finished
[2025-10-11 16:39:35] 2025-10-11 20:38:16,203 | INFO     | [job] job monitor thread has finished
[2025-10-11 16:39:35] 2025-10-11 20:38:16,361 | INFO     | [payload] control thread has finished
[2025-10-11 16:39:35] 2025-10-11 20:38:16,437 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 16:39:35] 2025-10-11 20:38:16,599 | INFO     | [job] queue monitor thread has finished
[2025-10-11 16:39:35] 2025-10-11 20:38:16,672 | INFO     | [job] control thread has finished
[2025-10-11 16:39:35] 2025-10-11 20:38:17,169 | INFO     | [data] control thread has finished
[2025-10-11 16:39:35] 2025-10-11 20:38:17,244 | INFO     | [payload] validate_post thread has finished
[2025-10-11 16:39:35] 2025-10-11 20:38:17,269 | INFO     | [payload] failed_post thread has finished
[2025-10-11 16:39:35] 2025-10-11 20:38:17,327 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 16:39:35] 2025-10-11 20:38:17,352 | INFO     | [job] validate thread has finished
[2025-10-11 16:39:35] 2025-10-11 20:38:17,528 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 16:39:35] 2025-10-11 20:38:17,529 | INFO     | [data] copytool_in thread has finished
[2025-10-11 16:39:35] 2025-10-11 20:38:17,532 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 16:39:35] 2025-10-11 20:38:17,541 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 16:39:35] 2025-10-11 20:38:17,683 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 16:39:35] 2025-10-11 20:38:18,461 | INFO     | [data] copytool_out thread has finished
[2025-10-11 16:39:35] 2025-10-11 20:38:21,401 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 16:39:35] 2025-10-11 20:38:49,790 | INFO     | PID=3747579 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 16:39:35] 2025-10-11 20:38:49,790 | INFO     | .. there are 58 such processes running
[2025-10-11 16:39:35] 2025-10-11 20:38:49,791 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 16:39:35] 2025-10-11 20:38:49,791 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 16:39:35] 2025-10-11 20:38:49,791 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 16:39:35] 2025-10-11 20:39:06,987 | INFO     | [monitor] cgroup control has ended
[2025-10-11 16:39:35] 2025-10-11 20:39:08,021 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140100266198848)>', '<ExcThread(monitor, started 140099551491840)>']
[2025-10-11 16:39:35] 2025-10-11 20:39:08,971 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 16:39:35] 2025-10-11 20:39:08,971 | INFO     | [monitor] control thread has ended
[2025-10-11 16:39:35] 2025-10-11 20:39:13,047 | INFO     | all workflow threads have been joined
[2025-10-11 16:39:35] 2025-10-11 20:39:13,079 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 16:39:35] 2025-10-11 20:39:13,080 | INFO     | traces error code: 0
[2025-10-11 16:39:35] 2025-10-11 20:39:13,081 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 16:39:35] 2025-10-11 20:39:14,629 [wrapper] ==== pilot stdout END ====
[2025-10-11 16:39:35] 2025-10-11 20:39:14,656 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 16:39:35] 2025-10-11 20:39:14,663 [wrapper] pilotpid: 3747579
[2025-10-11 16:39:35] 2025-10-11 20:39:14,678 [wrapper] Pilot exit status: 0
[2025-10-11 16:39:35] 2025-10-11 20:39:14,789 [wrapper] pandaids: 6838199949
[2025-10-11 16:39:35] 2025-10-11 20:39:15,080 [wrapper] cleanup supervisor_pilot 1188262 3747580
[2025-10-11 16:39:35] 2025-10-11 20:39:15,084 [wrapper] Test setup, not cleaning
[2025-10-11 16:39:35] 2025-10-11 20:39:15,087 [wrapper] apfmon messages muted
[2025-10-11 16:39:35] 2025-10-11 20:39:15,090 [wrapper] ==== wrapper stdout END ====
[2025-10-11 16:39:35] 2025-10-11 20:39:15,094 [wrapper] ==== wrapper stderr END ====
[2025-10-11 16:39:35]  *** Error codes and diagnostics ***
[2025-10-11 16:39:35]     "exeErrorCode": 0,
[2025-10-11 16:39:35]     "exeErrorDiag": "",
[2025-10-11 16:39:35]     "pilotErrorCode": 0,
[2025-10-11 16:39:35]     "pilotErrorDiag": "",
[2025-10-11 16:39:35]  *** Listing of results directory ***
[2025-10-11 16:39:35] total 417436
[2025-10-11 16:39:35] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 03:43 queuedata.json
[2025-10-11 16:39:35] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 03:43 pilot3.tar.gz
[2025-10-11 16:39:35] -rwx------. 1 boincer umatlas     36292 Oct 11 03:44 runpilot2-wrapper.sh
[2025-10-11 16:39:35] -rw-r--r--. 1 boincer umatlas       100 Oct 11 09:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 16:39:35] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 09:55 run_atlas
[2025-10-11 16:39:35] -rw-r--r--. 1 boincer umatlas       105 Oct 11 09:55 job.xml
[2025-10-11 16:39:35] -rw-r--r--. 2 boincer umatlas 222060753 Oct 11 09:55 EVNT.46676267._002155.pool.root.1
[2025-10-11 16:39:35] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 09:55 shared
[2025-10-11 16:39:35] -rw-r--r--. 2 boincer umatlas    569681 Oct 11 09:55 input.tar.gz
[2025-10-11 16:39:35] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 09:55 start_atlas.sh
[2025-10-11 16:39:35] -rw-r--r--. 1 boincer umatlas         0 Oct 11 09:55 boinc_lockfile
[2025-10-11 16:39:35] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 09:55 pandaJob.out
[2025-10-11 16:39:35] -rw-------. 1 boincer umatlas    975520 Oct 11 09:57 agis_schedconf.cvmfs.json
[2025-10-11 16:39:35] drwx------. 5 boincer umatlas      4096 Oct 11 09:57 pilot3
[2025-10-11 16:39:35] -rw-------. 1 boincer umatlas 194986806 Oct 11 16:35 HITS.46676269._053700.pool.root.1
[2025-10-11 16:39:35] -rw-r--r--. 1 boincer umatlas       531 Oct 11 16:35 boinc_task_state.xml
[2025-10-11 16:39:35] -rw-r--r--. 1 boincer umatlas      6860 Oct 11 16:36 init_data.xml
[2025-10-11 16:39:35] -rw-------. 1 boincer umatlas      1044 Oct 11 16:37 memory_monitor_summary.json
[2025-10-11 16:39:35] -rw-------. 1 boincer umatlas   1560580 Oct 11 16:37 agis_ddmendpoints.agis.ALL.json
[2025-10-11 16:39:35] -rw-------. 1 boincer umatlas    564990 Oct 11 16:37 log.46676269._053700.job.log.tgz.1
[2025-10-11 16:39:35] -rw-------. 1 boincer umatlas        95 Oct 11 16:37 pilot_heartbeat.json
[2025-10-11 16:39:35] -rw-------. 1 boincer umatlas      7832 Oct 11 16:38 heartbeat.json
[2025-10-11 16:39:35] -rw-------. 1 boincer umatlas      4824 Oct 11 16:39 pilotlog.txt
[2025-10-11 16:39:35] -rw-------. 1 boincer umatlas   2684745 Oct 11 16:39 log.46676269._053700.job.log.1
[2025-10-11 16:39:35] -rw-------. 1 boincer umatlas       357 Oct 11 16:39 output.list
[2025-10-11 16:39:35] -rw-r--r--. 1 boincer umatlas       620 Oct 11 16:39 runtime_log
[2025-10-11 16:39:35] -rw-------. 1 boincer umatlas   3266560 Oct 11 16:39 result.tar.gz
[2025-10-11 16:39:35] -rw-------. 1 boincer umatlas       658 Oct 11 16:39 tsfKDmCSjR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm4TRMDmAIDhsm.diag
[2025-10-11 16:39:35] -rw-r--r--. 1 boincer umatlas      8714 Oct 11 16:39 runtime_log.err
[2025-10-11 16:39:35] -rw-r--r--. 1 boincer umatlas        28 Oct 11 16:39 wrapper_checkpoint.txt
[2025-10-11 16:39:35] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 16:39 boinc_mmap_file
[2025-10-11 16:39:35] -rw-r--r--. 1 boincer umatlas     21027 Oct 11 16:39 stderr.txt
[2025-10-11 16:39:35] HITS file was successfully produced:
[2025-10-11 16:39:35] -rw-------. 1 boincer umatlas 194986806 Oct 11 16:35 shared/HITS.pool.root.1
[2025-10-11 16:39:35]  *** Contents of shared directory: ***
[2025-10-11 16:39:35] total 411056
[2025-10-11 16:39:35] -rw-r--r--. 2 boincer umatlas 222060753 Oct 11 09:55 ATLAS.root_0
[2025-10-11 16:39:35] -rw-r--r--. 2 boincer umatlas    569681 Oct 11 09:55 input.tar.gz
[2025-10-11 16:39:35] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 09:55 start_atlas.sh
[2025-10-11 16:39:35] -rw-------. 1 boincer umatlas 194986806 Oct 11 16:35 HITS.pool.root.1
[2025-10-11 16:39:35] -rw-------. 1 boincer umatlas   3266560 Oct 11 16:39 result.tar.gz
16:39:36 (3740488): run_atlas exited; CPU time 49122.476899
16:39:36 (3740488): called boinc_finish(0)

</stderr_txt>
]]>

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