Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:46:25 (1844012): wrapper (7.7.26015): starting
10:46:25 (1844012): wrapper: running run_atlas (--nthreads 11)
[2025-10-11 10:46:25] Arguments: --nthreads 11
[2025-10-11 10:46:25] Threads: 11
[2025-10-11 10:46:25] Checking for CVMFS
[2025-10-11 10:46:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 10:46:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 10:46:25] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 10:46:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 10:46:25] 2.13.2.0 4120630 127960 288520 151587 2 397 20960039 32935937 21628 16776704 0 91827350 99.671 82184023 29887 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 10:46:25] CVMFS is ok
[2025-10-11 10:46:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 10:46:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 10:46:25] Further information can be found at the LHC@home message board.
[2025-10-11 10:46:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 10:46:25] Checking for apptainer binary...
[2025-10-11 10:46:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 10:46:25] Running /usr/bin/apptainer --version
[2025-10-11 10:46:25] apptainer version 1.4.3-1.el9
[2025-10-11 10:46:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 10:46:25] c-5-4.aglt2.org
[2025-10-11 10:46:25] apptainer works
[2025-10-11 10:46:25] Set ATHENA_PROC_NUMBER=11
[2025-10-11 10:46:25] Set ATHENA_CORE_NUMBER=11
[2025-10-11 10:46:25] Starting ATLAS job with PandaID=6838199997
[2025-10-11 10:46:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 12:24:52]  *** The last 200 lines of the pilot log: ***
[2025-10-11 12:24:52]  mtime=0
[2025-10-11 12:24:52]  protocol_id=None
[2025-10-11 12:24:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-11 12:24:52]  replicas=None
[2025-10-11 12:24:52]  scope=mc23_13p6TeV
[2025-10-11 12:24:52]  status=None
[2025-10-11 12:24:52]  status_code=0
[2025-10-11 12:24:52]  storage_token=
[2025-10-11 12:24:52]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6838199997/log.46676269._053748.job.log.tgz.1
[2025-10-11 12:24:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/28/bc/log.46676269._053748.job.log.tgz.1
[2025-10-11 12:24:52]  workdir=None
[2025-10-11 12:24:52] ]
[2025-10-11 12:24:52] 2025-10-11 16:23:59,816 | INFO     | transferring file log.46676269._053748.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6838199997/log.46676269._053748.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-11 12:24:52] 2025-10-11 16:23:59,816 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6838199997/log.46676269._053748.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._053748.job
[2025-10-11 12:24:52] 2025-10-11 16:23:59,832 | INFO     | adding to output.list: log.46676269._053748.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/28/bc/log.46676269._053748.job.log.tg
[2025-10-11 12:24:52] 2025-10-11 16:23:59,833 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 12:24:52] 2025-10-11 16:23:59,833 | INFO     | summary of transferred files:
[2025-10-11 12:24:52] 2025-10-11 16:23:59,833 | INFO     |  -- lfn=log.46676269._053748.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 12:24:52] 2025-10-11 16:23:59,833 | INFO     | stage-out finished correctly
[2025-10-11 12:24:52] 2025-10-11 16:24:00,417 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 12:24:52] 2025-10-11 16:24:00,523 | INFO     | job 6838199997 has state=finished
[2025-10-11 12:24:52] 2025-10-11 16:24:00,524 | INFO     | preparing for final server update for job 6838199997 in state='finished'
[2025-10-11 12:24:52] 2025-10-11 16:24:00,524 | INFO     | this job has now completed (state=finished)
[2025-10-11 12:24:52] 2025-10-11 16:24:00,524 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 12:24:52] 2025-10-11 16:24:00,525 | INFO     | log transfer has been attempted: DONE
[2025-10-11 12:24:52] 2025-10-11 16:24:00,525 | INFO     | job 6838199997 has finished - writing final server update
[2025-10-11 12:24:52] 2025-10-11 16:24:00,525 | INFO     | total number of processed events: 400 (read)
[2025-10-11 12:24:52] 2025-10-11 16:24:00,526 | INFO     | executing command: lscpu
[2025-10-11 12:24:52] 2025-10-11 16:24:00,577 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 12:24:52] 2025-10-11 16:24:00,874 | INFO     | time since job start (5844s) is within the limit (172800.0s)
[2025-10-11 12:24:52] 2025-10-11 16:24:02,879 | INFO     | time since job start (5846s) is within the limit (172800.0s)
[2025-10-11 12:24:52] 2025-10-11 16:24:04,483 | WARNING  | process 1855864 can no longer be monitored (due to stat problems) - aborting
[2025-10-11 12:24:52] 2025-10-11 16:24:04,483 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838199997/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 12:24:52] 2025-10-11 16:24:04,563 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 12:24:52] 2025-10-11 16:24:04,579 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2739.9762500000006
[2025-10-11 12:24:52] 2025-10-11 16:24:04,586 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838199997/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 12:24:52] 2025-10-11 16:24:04,587 | INFO     | extracted standard info from prmon json
[2025-10-11 12:24:52] 2025-10-11 16:24:04,587 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 12:24:52] 2025-10-11 16:24:04,587 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 12:24:52] 2025-10-11 16:24:04,588 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 12:24:52] 2025-10-11 16:24:04,588 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 12:24:52] 2025-10-11 16:24:04,591 | INFO     | fitting pss+swap vs Time
[2025-10-11 12:24:52] 2025-10-11 16:24:04,591 | INFO     | sum of square deviations: 218580813.95505637
[2025-10-11 12:24:52] 2025-10-11 16:24:04,592 | INFO     | sum of deviations: -17415982135.67416
[2025-10-11 12:24:52] 2025-10-11 16:24:04,592 | INFO     | mean x: 1760197010.022472
[2025-10-11 12:24:52] 2025-10-11 16:24:04,592 | INFO     | mean y: 2405577.337078652
[2025-10-11 12:24:52] 2025-10-11 16:24:04,592 | INFO     | -- intersect: 140250577990.68393
[2025-10-11 12:24:52] 2025-10-11 16:24:04,592 | INFO     | intersect: 140250577990.68393
[2025-10-11 12:24:52] 2025-10-11 16:24:04,593 | INFO     | chi2: 0.24595630613965952
[2025-10-11 12:24:52] 2025-10-11 16:24:04,593 | INFO     | -- intersect: 140250577990.68393
[2025-10-11 12:24:52] 2025-10-11 16:24:04,593 | INFO     | current memory leak: -79.68 B/s (using 89 data points, chi2=0.25)
[2025-10-11 12:24:52] 2025-10-11 16:24:04,594 | INFO     | could have reported an average CPU frequency of 2694 MHz (7 samples)
[2025-10-11 12:24:52] 2025-10-11 16:24:04,594 | INFO     | ..............................
[2025-10-11 12:24:52] 2025-10-11 16:24:04,594 | INFO     | . Timing measurements:
[2025-10-11 12:24:52] 2025-10-11 16:24:04,594 | INFO     | . get job = 0 s
[2025-10-11 12:24:52] 2025-10-11 16:24:04,595 | INFO     | . initial setup = 2 s
[2025-10-11 12:24:52] 2025-10-11 16:24:04,595 | INFO     | . payload setup = 5 s
[2025-10-11 12:24:52] 2025-10-11 16:24:04,595 | INFO     | . stage-in = 0 s
[2025-10-11 12:24:52] 2025-10-11 16:24:04,595 | INFO     | . payload execution = 5817 s
[2025-10-11 12:24:52] 2025-10-11 16:24:04,595 | INFO     | . stage-out = 0 s
[2025-10-11 12:24:52] 2025-10-11 16:24:04,595 | INFO     | . log creation = 0 s
[2025-10-11 12:24:52] 2025-10-11 16:24:04,596 | INFO     | ..............................
[2025-10-11 12:24:52] 2025-10-11 16:24:04,707 | INFO     | 
[2025-10-11 12:24:52] 2025-10-11 16:24:04,708 | INFO     | job summary report
[2025-10-11 12:24:52] 2025-10-11 16:24:04,708 | INFO     | --------------------------------------------------
[2025-10-11 12:24:52] 2025-10-11 16:24:04,708 | INFO     | PanDA job id: 6838199997
[2025-10-11 12:24:52] 2025-10-11 16:24:04,708 | INFO     | task id: 46676269
[2025-10-11 12:24:52] 2025-10-11 16:24:04,708 | INFO     | errors: (none)
[2025-10-11 12:24:52] 2025-10-11 16:24:04,709 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 12:24:52] 2025-10-11 16:24:04,709 | INFO     | pilot state: finished 
[2025-10-11 12:24:52] 2025-10-11 16:24:04,709 | INFO     | transexitcode: 0
[2025-10-11 12:24:52] 2025-10-11 16:24:04,709 | INFO     | exeerrorcode: 0
[2025-10-11 12:24:52] 2025-10-11 16:24:04,709 | INFO     | exeerrordiag: 
[2025-10-11 12:24:52] 2025-10-11 16:24:04,709 | INFO     | exitcode: 0
[2025-10-11 12:24:52] 2025-10-11 16:24:04,710 | INFO     | exitmsg: OK
[2025-10-11 12:24:52] 2025-10-11 16:24:04,710 | INFO     | cpuconsumptiontime: 48658 s
[2025-10-11 12:24:52] 2025-10-11 16:24:04,710 | INFO     | nevents: 400
[2025-10-11 12:24:52] 2025-10-11 16:24:04,710 | INFO     | neventsw: 0
[2025-10-11 12:24:52] 2025-10-11 16:24:04,710 | INFO     | pid: 1855864
[2025-10-11 12:24:52] 2025-10-11 16:24:04,710 | INFO     | pgrp: 1855864
[2025-10-11 12:24:52] 2025-10-11 16:24:04,711 | INFO     | corecount: 11
[2025-10-11 12:24:52] 2025-10-11 16:24:04,711 | INFO     | event service: False
[2025-10-11 12:24:52] 2025-10-11 16:24:04,711 | INFO     | sizes: {0: 2348857, 5: 2349119, 11: 2349175, 5826: 2375906, 5828: 2384960, 5832: 2385098}
[2025-10-11 12:24:52] 2025-10-11 16:24:04,711 | INFO     | --------------------------------------------------
[2025-10-11 12:24:52] 2025-10-11 16:24:04,711 | INFO     | 
[2025-10-11 12:24:52] 2025-10-11 16:24:04,712 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 12:24:52] 2025-10-11 16:24:04,731 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 12:24:52] 2025-10-11 16:24:04,732 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 12:24:52] 2025-10-11 16:24:04,732 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 12:24:52] 2025-10-11 16:24:04,732 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 12:24:52] 2025-10-11 16:24:04,732 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 12:24:52] 2025-10-11 16:24:04,732 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 12:24:52] 2025-10-11 16:24:04,732 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 12:24:52] 2025-10-11 16:24:04,732 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 12:24:52] 2025-10-11 16:24:04,732 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 12:24:52] 2025-10-11 16:24:04,733 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 12:24:52] 2025-10-11 16:24:04,733 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 12:24:52] 2025-10-11 16:24:04,733 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 12:24:52] 2025-10-11 16:24:04,733 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 12:24:52] 2025-10-11 16:24:04,733 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 12:24:52] 2025-10-11 16:24:04,733 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 12:24:52] 2025-10-11 16:24:04,733 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 12:24:52] 2025-10-11 16:24:04,733 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 12:24:52] 2025-10-11 16:24:04,733 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 12:24:52] 2025-10-11 16:24:04,734 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 12:24:52] 2025-10-11 16:24:04,734 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 12:24:52] 2025-10-11 16:24:04,734 | INFO     | job 6838199997 has completed (purged errors)
[2025-10-11 12:24:52] 2025-10-11 16:24:04,734 | INFO     | overall cleanup function is called
[2025-10-11 12:24:52] 2025-10-11 16:24:04,998 | INFO     | number of running child processes to parent process 1855864: 1
[2025-10-11 12:24:52] 2025-10-11 16:24:04,998 | INFO     | maximum number of monitored processes: 6
[2025-10-11 12:24:52] 2025-10-11 16:24:04,998 | INFO     | aborting job monitoring since job object (job id=6838199997) has expired
[2025-10-11 12:24:52] 2025-10-11 16:24:05,740 | INFO     | --- collectZombieJob: --- 10, [1855864]
[2025-10-11 12:24:52] 2025-10-11 16:24:05,740 | INFO     | zombie collector waiting for pid 1855864
[2025-10-11 12:24:52] 2025-10-11 16:24:05,740 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 12:24:52] 2025-10-11 16:24:05,740 | INFO     | collected zombie processes
[2025-10-11 12:24:52] 2025-10-11 16:24:05,740 | INFO     | will attempt to kill all subprocesses of pid=1855864
[2025-10-11 12:24:52] 2025-10-11 16:24:06,100 | INFO     | process IDs to be killed: [1855864] (in reverse order)
[2025-10-11 12:24:52] 2025-10-11 16:24:06,197 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 12:24:52] 2025-10-11 16:24:06,197 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 12:24:52] 2025-10-11 16:24:06,210 | INFO     | did not find any defunct processes belonging to 1855864
[2025-10-11 12:24:52] 2025-10-11 16:24:06,222 | INFO     | did not find any defunct processes belonging to 1855864
[2025-10-11 12:24:52] 2025-10-11 16:24:06,223 | INFO     | ready for new job
[2025-10-11 12:24:52] 2025-10-11 16:24:06,223 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 12:24:52] 2025-10-11 16:24:06,225 | INFO     | ***************************************
[2025-10-11 12:24:52] 2025-10-11 16:24:06,226 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 12:24:52] 2025-10-11 16:24:06,226 | INFO     | ***************************************
[2025-10-11 12:24:52] 2025-10-11 16:24:06,226 | INFO     | 
[2025-10-11 12:24:52] 2025-10-11 16:24:06,239 | INFO     | architecture information:
[2025-10-11 12:24:52] 2025-10-11 16:24:06,240 | INFO     | executing command: cat /etc/os-release
[2025-10-11 12:24:52] 2025-10-11 16:24:06,254 | INFO     | cat /etc/os-release:
[2025-10-11 12:24:52] NAME="CentOS Linux"
[2025-10-11 12:24:52] VERSION="7 (Core)"
[2025-10-11 12:24:52] ID="centos"
[2025-10-11 12:24:52] ID_LIKE="rhel fedora"
[2025-10-11 12:24:52] VERSION_ID="7"
[2025-10-11 12:24:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 12:24:52] ANSI_COLOR="0;31"
[2025-10-11 12:24:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 12:24:52] HOME_URL="https://www.centos.org/"
[2025-10-11 12:24:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 12:24:52] 
[2025-10-11 12:24:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 12:24:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 12:24:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 12:24:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 12:24:52] 
[2025-10-11 12:24:52] 2025-10-11 16:24:06,254 | INFO     | ***************************************
[2025-10-11 12:24:52] 2025-10-11 16:24:06,758 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 12:24:52] 2025-10-11 16:24:06,774 | INFO     | sufficient remaining disk space (75868667904 B)
[2025-10-11 12:24:52] 2025-10-11 16:24:06,774 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 12:24:52] 2025-10-11 16:24:06,774 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 12:24:52] 2025-10-11 16:24:06,774 | INFO     | update_server=False
[2025-10-11 12:24:52] 2025-10-11 16:24:06,775 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 12:24:52] 2025-10-11 16:24:06,775 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 12:24:52] 2025-10-11 16:24:06,775 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 12:24:52] 2025-10-11 16:24:06,776 | INFO     | aborting loop
[2025-10-11 12:24:52] 2025-10-11 16:24:07,530 | INFO     | all data control threads have been joined
[2025-10-11 12:24:52] 2025-10-11 16:24:07,530 | INFO     | all job control threads have been joined
[2025-10-11 12:24:52] 2025-10-11 16:24:07,780 | INFO     | [job] retrieve thread has finished
[2025-10-11 12:24:52] 2025-10-11 16:24:07,781 | INFO     | [job] job monitor thread has finished
[2025-10-11 12:24:52] 2025-10-11 16:24:07,859 | INFO     | [payload] failed_post thread has finished
[2025-10-11 12:24:52] 2025-10-11 16:24:07,903 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 12:24:52] 2025-10-11 16:24:07,940 | INFO     | [job] validate thread has finished
[2025-10-11 12:24:52] 2025-10-11 16:24:07,956 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 12:24:52] 2025-10-11 16:24:08,119 | INFO     | all payload control threads have been joined
[2025-10-11 12:24:52] 2025-10-11 16:24:08,231 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 12:24:52] 2025-10-11 16:24:08,264 | INFO     | [data] copytool_in thread has finished
[2025-10-11 12:24:52] 2025-10-11 16:24:08,414 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 12:24:52] 2025-10-11 16:24:08,532 | INFO     | [job] control thread has finished
[2025-10-11 12:24:52] 2025-10-11 16:24:08,536 | INFO     | [data] control thread has finished
[2025-10-11 12:24:52] 2025-10-11 16:24:08,929 | INFO     | [payload] validate_post thread has finished
[2025-10-11 12:24:52] 2025-10-11 16:24:09,125 | INFO     | [payload] control thread has finished
[2025-10-11 12:24:52] 2025-10-11 16:24:09,180 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 12:24:52] 2025-10-11 16:24:09,717 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 12:24:52] 2025-10-11 16:24:09,912 | INFO     | [data] copytool_out thread has finished
[2025-10-11 12:24:52] 2025-10-11 16:24:10,723 | INFO     | [job] queue monitor thread has finished
[2025-10-11 12:24:52] 2025-10-11 16:24:10,783 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 12:24:52] 2025-10-11 16:24:36,443 | INFO     | PID=1848376 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 12:24:52] 2025-10-11 16:24:36,444 | INFO     | .. there are 30 such processes running
[2025-10-11 12:24:52] 2025-10-11 16:24:36,446 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 12:24:52] 2025-10-11 16:24:36,446 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 12:24:52] 2025-10-11 16:24:36,446 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 12:24:52] 2025-10-11 16:24:46,231 | INFO     | [monitor] cgroup control has ended
[2025-10-11 12:24:52] 2025-10-11 16:24:47,129 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140191351990080)>', '<ExcThread(monitor, started 140190853084928)>']
[2025-10-11 12:24:52] 2025-10-11 16:24:47,488 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 12:24:52] 2025-10-11 16:24:47,489 | INFO     | [monitor] control thread has ended
[2025-10-11 12:24:52] 2025-10-11 16:24:52,154 | INFO     | all workflow threads have been joined
[2025-10-11 12:24:52] 2025-10-11 16:24:52,154 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 12:24:52] 2025-10-11 16:24:52,154 | INFO     | traces error code: 0
[2025-10-11 12:24:52] 2025-10-11 16:24:52,155 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 12:24:52] 2025-10-11 16:24:52,323 [wrapper] ==== pilot stdout END ====
[2025-10-11 12:24:52] 2025-10-11 16:24:52,326 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 12:24:52] 2025-10-11 16:24:52,329 [wrapper] pilotpid: 1848376
[2025-10-11 12:24:52] 2025-10-11 16:24:52,332 [wrapper] Pilot exit status: 0
[2025-10-11 12:24:52] 2025-10-11 16:24:52,344 [wrapper] pandaids: 6838199997
[2025-10-11 12:24:52] 2025-10-11 16:24:52,416 [wrapper] cleanup supervisor_pilot 2109451 1848377
[2025-10-11 12:24:52] 2025-10-11 16:24:52,418 [wrapper] Test setup, not cleaning
[2025-10-11 12:24:52] 2025-10-11 16:24:52,421 [wrapper] apfmon messages muted
[2025-10-11 12:24:52] 2025-10-11 16:24:52,424 [wrapper] ==== wrapper stdout END ====
[2025-10-11 12:24:52] 2025-10-11 16:24:52,426 [wrapper] ==== wrapper stderr END ====
[2025-10-11 12:24:52]  *** Error codes and diagnostics ***
[2025-10-11 12:24:52]     "exeErrorCode": 0,
[2025-10-11 12:24:52]     "exeErrorDiag": "",
[2025-10-11 12:24:52]     "pilotErrorCode": 0,
[2025-10-11 12:24:52]     "pilotErrorDiag": "",
[2025-10-11 12:24:52]  *** Listing of results directory ***
[2025-10-11 12:24:52] total 413544
[2025-10-11 12:24:52] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 03:43 pilot3.tar.gz
[2025-10-11 12:24:52] -rwx------. 1 boincer umatlas     36292 Oct 11 03:46 runpilot2-wrapper.sh
[2025-10-11 12:24:52] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 03:46 queuedata.json
[2025-10-11 12:24:52] -rw-r--r--. 1 boincer umatlas       100 Oct 11 10:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 12:24:52] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 10:46 run_atlas
[2025-10-11 12:24:52] -rw-r--r--. 1 boincer umatlas       105 Oct 11 10:46 job.xml
[2025-10-11 12:24:52] -rw-r--r--. 2 boincer umatlas 221600631 Oct 11 10:46 EVNT.46676267._002157.pool.root.1
[2025-10-11 12:24:52] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 10:46 start_atlas.sh
[2025-10-11 12:24:52] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 10:46 shared
[2025-10-11 12:24:52] -rw-r--r--. 2 boincer umatlas    569678 Oct 11 10:46 input.tar.gz
[2025-10-11 12:24:52] -rw-r--r--. 1 boincer umatlas         0 Oct 11 10:46 boinc_lockfile
[2025-10-11 12:24:52] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 10:46 pandaJob.out
[2025-10-11 12:24:52] -rw-------. 1 boincer umatlas    975536 Oct 11 10:46 agis_schedconf.cvmfs.json
[2025-10-11 12:24:52] -rw-------. 1 boincer umatlas   1560580 Oct 11 10:46 agis_ddmendpoints.agis.ALL.json
[2025-10-11 12:24:52] drwx------. 5 boincer umatlas      4096 Oct 11 10:46 pilot3
[2025-10-11 12:24:52] -rw-r--r--. 1 boincer umatlas      6654 Oct 11 12:18 init_data.xml
[2025-10-11 12:24:52] -rw-r--r--. 1 boincer umatlas       530 Oct 11 12:23 boinc_task_state.xml
[2025-10-11 12:24:52] -rw-------. 1 boincer umatlas 195530182 Oct 11 12:23 HITS.46676269._053748.pool.root.1
[2025-10-11 12:24:52] -rw-------. 1 boincer umatlas      1041 Oct 11 12:23 memory_monitor_summary.json
[2025-10-11 12:24:52] -rw-------. 1 boincer umatlas    388351 Oct 11 12:23 log.46676269._053748.job.log.tgz.1
[2025-10-11 12:24:52] -rw-------. 1 boincer umatlas      7818 Oct 11 12:24 heartbeat.json
[2025-10-11 12:24:52] -rw-------. 1 boincer umatlas        95 Oct 11 12:24 pilot_heartbeat.json
[2025-10-11 12:24:52] -rw-r--r--. 1 boincer umatlas        27 Oct 11 12:24 wrapper_checkpoint.txt
[2025-10-11 12:24:52] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 12:24 boinc_mmap_file
[2025-10-11 12:24:52] -rw-------. 1 boincer umatlas      4824 Oct 11 12:24 pilotlog.txt
[2025-10-11 12:24:52] -rw-------. 1 boincer umatlas    829574 Oct 11 12:24 log.46676269._053748.job.log.1
[2025-10-11 12:24:52] -rw-------. 1 boincer umatlas       357 Oct 11 12:24 output.list
[2025-10-11 12:24:52] -rw-r--r--. 1 boincer umatlas       620 Oct 11 12:24 runtime_log
[2025-10-11 12:24:52] -rw-------. 1 boincer umatlas   1239040 Oct 11 12:24 result.tar.gz
[2025-10-11 12:24:52] -rw-------. 1 boincer umatlas       650 Oct 11 12:24 zOdLDm9TjR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmTURMDmpzelkn.diag
[2025-10-11 12:24:52] -rw-r--r--. 1 boincer umatlas      8690 Oct 11 12:24 runtime_log.err
[2025-10-11 12:24:52] -rw-r--r--. 1 boincer umatlas     21722 Oct 11 12:24 stderr.txt
[2025-10-11 12:24:52] HITS file was successfully produced:
[2025-10-11 12:24:52] -rw-------. 1 boincer umatlas 195530182 Oct 11 12:23 shared/HITS.pool.root.1
[2025-10-11 12:24:52]  *** Contents of shared directory: ***
[2025-10-11 12:24:52] total 409148
[2025-10-11 12:24:52] -rw-r--r--. 2 boincer umatlas 221600631 Oct 11 10:46 ATLAS.root_0
[2025-10-11 12:24:52] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 10:46 start_atlas.sh
[2025-10-11 12:24:52] -rw-r--r--. 2 boincer umatlas    569678 Oct 11 10:46 input.tar.gz
[2025-10-11 12:24:52] -rw-------. 1 boincer umatlas 195530182 Oct 11 12:23 HITS.pool.root.1
[2025-10-11 12:24:52] -rw-------. 1 boincer umatlas   1239040 Oct 11 12:24 result.tar.gz
12:24:53 (1844012): run_atlas exited; CPU time 48786.242366
12:24:53 (1844012): called boinc_finish(0)

</stderr_txt>
]]>

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