Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:21:46 (1228912): wrapper (7.7.26015): starting
10:21:46 (1228912): wrapper: running run_atlas (--nthreads 9)
[2025-10-11 10:21:46] Arguments: --nthreads 9
[2025-10-11 10:21:46] Threads: 9
[2025-10-11 10:21:46] Checking for CVMFS
[2025-10-11 10:21:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 10:21:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 10:22:08] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 10:22:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 10:22:10] 2.13.2.0 3526814 59103 362700 151587 2 102 30277510 32935936 36054 16776704 0 98779370 99.542 106393279 8095 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 10:22:10] CVMFS is ok
[2025-10-11 10:22:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 10:22:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 10:22:10] Further information can be found at the LHC@home message board.
[2025-10-11 10:22:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 10:22:10] Checking for apptainer binary...
[2025-10-11 10:22:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 10:22:10] Running /usr/bin/apptainer --version
[2025-10-11 10:22:10] apptainer version 1.4.3-1.el9
[2025-10-11 10:22:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 10:22:12] c6-12-25-2.aglt2.org
[2025-10-11 10:22:12] apptainer works
[2025-10-11 10:22:12] Set ATHENA_PROC_NUMBER=9
[2025-10-11 10:22:12] Set ATHENA_CORE_NUMBER=9
[2025-10-11 10:22:12] Starting ATLAS job with PandaID=6838363712
[2025-10-11 10:22:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 19:51:35]  *** The last 200 lines of the pilot log: ***
[2025-10-11 19:51:35] 2025-10-11 23:50:25,078 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 19:51:35] 2025-10-11 23:50:25,168 | INFO     | fitting pss+swap vs Time
[2025-10-11 19:51:35] 2025-10-11 23:50:25,175 | INFO     | sum of square deviations: 52153091796.775444
[2025-10-11 19:51:35] 2025-10-11 23:50:25,199 | INFO     | time since job start (33981s) is within the limit (172800.0s)
[2025-10-11 19:51:35] 2025-10-11 23:50:25,200 | INFO     | 33990s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-11 19:51:35] 2025-10-11 23:50:25,255 | INFO     | sum of deviations: 215346005247.15564
[2025-10-11 19:51:35] 2025-10-11 23:50:25,255 | INFO     | mean x: 1760209709.713768
[2025-10-11 19:51:35] 2025-10-11 23:50:25,256 | INFO     | mean y: 2095439.545289855
[2025-10-11 19:51:35] 2025-10-11 23:50:25,256 | INFO     | -- intersect: -7266009217.8194685
[2025-10-11 19:51:35] 2025-10-11 23:50:25,256 | INFO     | intersect: -7266009217.8194685
[2025-10-11 19:51:35] 2025-10-11 23:50:25,266 | INFO     | chi2: 9.158991602882242
[2025-10-11 19:51:35] 2025-10-11 23:50:25,269 | INFO     | sum of square deviations: 50748841899.341736
[2025-10-11 19:51:35] 2025-10-11 23:50:25,345 | INFO     | sum of deviations: 359238010819.2687
[2025-10-11 19:51:35] 2025-10-11 23:50:25,363 | INFO     | mean x: 1760209557.2248628
[2025-10-11 19:51:35] 2025-10-11 23:50:25,364 | INFO     | mean y: 2111065.5831809873
[2025-10-11 19:51:35] 2025-10-11 23:50:25,364 | INFO     | -- intersect: -12457960067.010042
[2025-10-11 19:51:35] 2025-10-11 23:50:25,365 | INFO     | intersect: -12457960067.010042
[2025-10-11 19:51:35] 2025-10-11 23:50:25,367 | INFO     | chi2: 5.787349370012362
[2025-10-11 19:51:35] 2025-10-11 23:50:25,368 | INFO     | current chi2=5.787349370012362 (change=36.812373884138715 %)
[2025-10-11 19:51:35] 2025-10-11 23:50:25,370 | INFO     | sum of square deviations: 49369900999.13107
[2025-10-11 19:51:35] 2025-10-11 23:50:25,392 | INFO     | sum of deviations: 363220476988.49976
[2025-10-11 19:51:35] 2025-10-11 23:50:25,393 | INFO     | mean x: 1760209404.7287822
[2025-10-11 19:51:35] 2025-10-11 23:50:25,394 | INFO     | mean y: 2111505.5
[2025-10-11 19:51:35] 2025-10-11 23:50:25,394 | INFO     | -- intersect: -12947967118.24454
[2025-10-11 19:51:35] 2025-10-11 23:50:25,394 | INFO     | intersect: -12947967118.24454
[2025-10-11 19:51:35] 2025-10-11 23:50:25,396 | INFO     | chi2: 5.770025857924608
[2025-10-11 19:51:35] 2025-10-11 23:50:25,397 | INFO     | current chi2=5.770025857924608 (change=0.299334133472518 %)
[2025-10-11 19:51:35] 2025-10-11 23:50:25,397 | INFO     | right removable region: 541
[2025-10-11 19:51:35] 2025-10-11 23:50:25,399 | INFO     | sum of square deviations: 50748533853.67467
[2025-10-11 19:51:35] 2025-10-11 23:50:25,418 | INFO     | sum of deviations: 76555335395.17715
[2025-10-11 19:51:35] 2025-10-11 23:50:25,419 | INFO     | mean x: 1760209862.2193785
[2025-10-11 19:51:35] 2025-10-11 23:50:25,419 | INFO     | mean y: 2110496.756855576
[2025-10-11 19:51:35] 2025-10-11 23:50:25,419 | INFO     | -- intersect: -2653206733.8185787
[2025-10-11 19:51:35] 2025-10-11 23:50:25,419 | INFO     | intersect: -2653206733.8185787
[2025-10-11 19:51:35] 2025-10-11 23:50:25,421 | INFO     | chi2: 5.9046421837127845
[2025-10-11 19:51:35] 2025-10-11 23:50:25,422 | INFO     | current chi2=5.9046421837127845 (change=35.53174367083541 %)
[2025-10-11 19:51:35] 2025-10-11 23:50:25,424 | INFO     | sum of square deviations: 49369485224.931755
[2025-10-11 19:51:35] 2025-10-11 23:50:25,442 | INFO     | sum of deviations: -3254163724.9482765
[2025-10-11 19:51:35] 2025-10-11 23:50:25,443 | INFO     | mean x: 1760210014.7214022
[2025-10-11 19:51:35] 2025-10-11 23:50:25,443 | INFO     | mean y: 2119313.6162361624
[2025-10-11 19:51:35] 2025-10-11 23:50:25,444 | INFO     | -- intersect: 118142633.52933085
[2025-10-11 19:51:35] 2025-10-11 23:50:25,444 | INFO     | intersect: 118142633.52933085
[2025-10-11 19:51:35] 2025-10-11 23:50:25,446 | INFO     | chi2: 4.844802329537954
[2025-10-11 19:51:35] 2025-10-11 23:50:25,446 | INFO     | current chi2=4.844802329537954 (change=17.949264683612263 %)
[2025-10-11 19:51:35] 2025-10-11 23:50:25,446 | INFO     | left removable region: 20
[2025-10-11 19:51:35] 2025-10-11 23:50:25,448 | INFO     | sum of square deviations: 43850549391.431786
[2025-10-11 19:51:35] 2025-10-11 23:50:25,467 | INFO     | sum of deviations: 57288615106.15924
[2025-10-11 19:51:35] 2025-10-11 23:50:25,467 | INFO     | mean x: 1760209984.234165
[2025-10-11 19:51:35] 2025-10-11 23:50:25,468 | INFO     | mean y: 2146760.1708253357
[2025-10-11 19:51:35] 2025-10-11 23:50:25,468 | INFO     | -- intersect: -2297482177.0327163
[2025-10-11 19:51:35] 2025-10-11 23:50:25,468 | INFO     | intersect: -2297482177.0327163
[2025-10-11 19:51:35] 2025-10-11 23:50:25,470 | INFO     | chi2: 0.7378525654794258
[2025-10-11 19:51:35] 2025-10-11 23:50:25,471 | INFO     | -- intersect: -2297482177.0327163
[2025-10-11 19:51:35] 2025-10-11 23:50:25,471 | INFO     | current memory leak: 1.31 B/s (using 521 data points, chi2=0.74)
[2025-10-11 19:51:35] 2025-10-11 23:50:25,473 | INFO     | could have reported an average CPU frequency of 999 MHz (22 samples)
[2025-10-11 19:51:35] 2025-10-11 23:50:25,473 | INFO     | ..............................
[2025-10-11 19:51:35] 2025-10-11 23:50:25,473 | INFO     | . Timing measurements:
[2025-10-11 19:51:35] 2025-10-11 23:50:25,474 | INFO     | . get job = 1 s
[2025-10-11 19:51:35] 2025-10-11 23:50:25,474 | INFO     | . initial setup = 8 s
[2025-10-11 19:51:35] 2025-10-11 23:50:25,474 | INFO     | . payload setup = 87 s
[2025-10-11 19:51:35] 2025-10-11 23:50:25,474 | INFO     | . stage-in = 0 s
[2025-10-11 19:51:35] 2025-10-11 23:50:25,474 | INFO     | . payload execution = 33696 s
[2025-10-11 19:51:35] 2025-10-11 23:50:25,475 | INFO     | . stage-out = 18 s
[2025-10-11 19:51:35] 2025-10-11 23:50:25,475 | INFO     | . log creation = 1 s
[2025-10-11 19:51:35] 2025-10-11 23:50:25,475 | INFO     | ..............................
[2025-10-11 19:51:35] 2025-10-11 23:50:26,491 | INFO     | 
[2025-10-11 19:51:35] 2025-10-11 23:50:26,492 | INFO     | job summary report
[2025-10-11 19:51:35] 2025-10-11 23:50:26,492 | INFO     | --------------------------------------------------
[2025-10-11 19:51:35] 2025-10-11 23:50:26,492 | INFO     | PanDA job id: 6838363712
[2025-10-11 19:51:35] 2025-10-11 23:50:26,493 | INFO     | task id: 46676269
[2025-10-11 19:51:35] 2025-10-11 23:50:26,493 | INFO     | errors: (none)
[2025-10-11 19:51:35] 2025-10-11 23:50:26,493 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 19:51:35] 2025-10-11 23:50:26,493 | INFO     | pilot state: finished 
[2025-10-11 19:51:35] 2025-10-11 23:50:26,493 | INFO     | transexitcode: 0
[2025-10-11 19:51:35] 2025-10-11 23:50:26,494 | INFO     | exeerrorcode: 0
[2025-10-11 19:51:35] 2025-10-11 23:50:26,494 | INFO     | exeerrordiag: 
[2025-10-11 19:51:35] 2025-10-11 23:50:26,494 | INFO     | exitcode: 0
[2025-10-11 19:51:35] 2025-10-11 23:50:26,494 | INFO     | exitmsg: OK
[2025-10-11 19:51:35] 2025-10-11 23:50:26,494 | INFO     | cpuconsumptiontime: 109081 s
[2025-10-11 19:51:35] 2025-10-11 23:50:26,495 | INFO     | nevents: 400
[2025-10-11 19:51:35] 2025-10-11 23:50:26,495 | INFO     | neventsw: 0
[2025-10-11 19:51:35] 2025-10-11 23:50:26,495 | INFO     | pid: 1247131
[2025-10-11 19:51:35] 2025-10-11 23:50:26,495 | INFO     | pgrp: 1247131
[2025-10-11 19:51:35] 2025-10-11 23:50:26,496 | INFO     | corecount: 9
[2025-10-11 19:51:35] 2025-10-11 23:50:26,496 | INFO     | event service: False
[2025-10-11 19:51:35] 2025-10-11 23:50:26,496 | INFO     | sizes: {0: 2348023, 1: 2348624, 3: 2348708, 4: 2348764, 5: 2348764, 6: 2348963, 7: 2349119, 19: 2349147, 31: 2349175, 43: 2349203, 54: 2349231, 56: 2349801, 66: 23
[2025-10-11 19:51:35] 2025-10-11 23:50:26,496 | INFO     | --------------------------------------------------
[2025-10-11 19:51:35] 2025-10-11 23:50:26,497 | INFO     | 
[2025-10-11 19:51:35] 2025-10-11 23:50:26,497 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-11 19:51:35] 2025-10-11 23:50:26,729 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 19:51:35] 2025-10-11 23:50:26,729 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 19:51:35] 2025-10-11 23:50:26,730 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 19:51:35] 2025-10-11 23:50:26,730 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 19:51:35] 2025-10-11 23:50:26,730 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 19:51:35] 2025-10-11 23:50:26,731 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 19:51:35] 2025-10-11 23:50:26,731 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 19:51:35] 2025-10-11 23:50:26,731 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 19:51:35] 2025-10-11 23:50:26,731 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 19:51:35] 2025-10-11 23:50:26,732 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 19:51:35] 2025-10-11 23:50:26,732 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 19:51:35] 2025-10-11 23:50:26,750 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 19:51:35] 2025-10-11 23:50:26,751 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 19:51:35] 2025-10-11 23:50:26,751 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 19:51:35] 2025-10-11 23:50:26,751 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 19:51:35] 2025-10-11 23:50:26,751 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 19:51:35] 2025-10-11 23:50:26,752 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 19:51:35] 2025-10-11 23:50:26,752 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 19:51:35] 2025-10-11 23:50:26,752 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 19:51:35] 2025-10-11 23:50:26,752 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 19:51:35] 2025-10-11 23:50:26,753 | INFO     | job 6838363712 has completed (purged errors)
[2025-10-11 19:51:35] 2025-10-11 23:50:26,753 | INFO     | overall cleanup function is called
[2025-10-11 19:51:35] 2025-10-11 23:50:27,770 | INFO     | --- collectZombieJob: --- 10, [1247131]
[2025-10-11 19:51:35] 2025-10-11 23:50:27,771 | INFO     | zombie collector waiting for pid 1247131
[2025-10-11 19:51:35] 2025-10-11 23:50:27,771 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 19:51:35] 2025-10-11 23:50:27,771 | INFO     | collected zombie processes
[2025-10-11 19:51:35] 2025-10-11 23:50:27,771 | INFO     | will attempt to kill all subprocesses of pid=1247131
[2025-10-11 19:51:35] 2025-10-11 23:50:36,315 | INFO     | process IDs to be killed: [1247131] (in reverse order)
[2025-10-11 19:51:35] 2025-10-11 23:50:37,650 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 19:51:35] 2025-10-11 23:50:37,669 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 19:51:35] 2025-10-11 23:50:37,847 | INFO     | did not find any defunct processes belonging to 1247131
[2025-10-11 19:51:35] 2025-10-11 23:50:38,167 | INFO     | did not find any defunct processes belonging to 1247131
[2025-10-11 19:51:35] 2025-10-11 23:50:38,168 | INFO     | ready for new job
[2025-10-11 19:51:35] 2025-10-11 23:50:38,168 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 19:51:35] 2025-10-11 23:50:38,205 | INFO     | ***************************************
[2025-10-11 19:51:35] 2025-10-11 23:50:38,235 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 19:51:35] 2025-10-11 23:50:38,235 | INFO     | ***************************************
[2025-10-11 19:51:35] 2025-10-11 23:50:38,236 | INFO     | 
[2025-10-11 19:51:35] 2025-10-11 23:50:38,344 | INFO     | architecture information:
[2025-10-11 19:51:35] 2025-10-11 23:50:38,363 | INFO     | executing command: cat /etc/os-release
[2025-10-11 19:51:35] 2025-10-11 23:50:38,641 | INFO     | cat /etc/os-release:
[2025-10-11 19:51:35] NAME="CentOS Linux"
[2025-10-11 19:51:35] VERSION="7 (Core)"
[2025-10-11 19:51:35] ID="centos"
[2025-10-11 19:51:35] ID_LIKE="rhel fedora"
[2025-10-11 19:51:35] VERSION_ID="7"
[2025-10-11 19:51:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 19:51:35] ANSI_COLOR="0;31"
[2025-10-11 19:51:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 19:51:35] HOME_URL="https://www.centos.org/"
[2025-10-11 19:51:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 19:51:35] 
[2025-10-11 19:51:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 19:51:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 19:51:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 19:51:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 19:51:35] 
[2025-10-11 19:51:35] 2025-10-11 23:50:38,642 | INFO     | ***************************************
[2025-10-11 19:51:35] 2025-10-11 23:50:39,147 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-11 19:51:35] 2025-10-11 23:50:39,346 | INFO     | sufficient remaining disk space (93973381120 B)
[2025-10-11 19:51:35] 2025-10-11 23:50:39,347 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 19:51:35] 2025-10-11 23:50:39,347 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 19:51:35] 2025-10-11 23:50:39,347 | INFO     | update_server=False
[2025-10-11 19:51:35] 2025-10-11 23:50:39,348 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 19:51:35] 2025-10-11 23:50:39,348 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 19:51:35] 2025-10-11 23:50:39,348 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 19:51:35] 2025-10-11 23:50:39,365 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 19:51:35] 2025-10-11 23:50:39,366 | INFO     | aborting loop
[2025-10-11 19:51:35] 2025-10-11 23:50:39,572 | INFO     | all data control threads have been joined
[2025-10-11 19:51:35] 2025-10-11 23:50:39,720 | INFO     | all job control threads have been joined
[2025-10-11 19:51:35] 2025-10-11 23:50:39,930 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 19:51:35] 2025-10-11 23:50:40,372 | INFO     | [job] retrieve thread has finished
[2025-10-11 19:51:35] 2025-10-11 23:50:40,386 | INFO     | [job] job monitor thread has finished
[2025-10-11 19:51:35] 2025-10-11 23:50:40,498 | INFO     | [data] copytool_in thread has finished
[2025-10-11 19:51:35] 2025-10-11 23:50:40,522 | INFO     | all payload control threads have been joined
[2025-10-11 19:51:35] 2025-10-11 23:50:40,540 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 19:51:35] 2025-10-11 23:50:40,579 | INFO     | [data] control thread has finished
[2025-10-11 19:51:35] 2025-10-11 23:50:40,726 | INFO     | [job] control thread has finished
[2025-10-11 19:51:35] 2025-10-11 23:50:40,936 | INFO     | [job] queue monitor thread has finished
[2025-10-11 19:51:35] 2025-10-11 23:50:40,961 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 19:51:35] 2025-10-11 23:50:41,316 | INFO     | [payload] validate_post thread has finished
[2025-10-11 19:51:35] 2025-10-11 23:50:41,322 | INFO     | [payload] failed_post thread has finished
[2025-10-11 19:51:35] 2025-10-11 23:50:41,359 | INFO     | [data] copytool_out thread has finished
[2025-10-11 19:51:35] 2025-10-11 23:50:41,460 | INFO     | [job] validate thread has finished
[2025-10-11 19:51:35] 2025-10-11 23:50:41,511 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 19:51:35] 2025-10-11 23:50:41,528 | INFO     | [payload] control thread has finished
[2025-10-11 19:51:35] 2025-10-11 23:50:41,574 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 19:51:35] 2025-10-11 23:50:43,360 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 19:51:35] 2025-10-11 23:51:05,589 | INFO     | PID=1236635 has CPU usage=8.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 19:51:35] 2025-10-11 23:51:05,590 | INFO     | .. there are 39 such processes running
[2025-10-11 19:51:35] 2025-10-11 23:51:05,600 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 19:51:35] 2025-10-11 23:51:05,600 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 19:51:35] 2025-10-11 23:51:05,601 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 19:51:35] 2025-10-11 23:51:06,829 | INFO     | [monitor] cgroup control has ended
[2025-10-11 19:51:35] 2025-10-11 23:51:07,057 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140649809241920)>', '<ExcThread(monitor, started 140648493606656)>']
[2025-10-11 19:51:35] 2025-10-11 23:51:07,633 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 19:51:35] 2025-10-11 23:51:07,634 | INFO     | [monitor] control thread has ended
[2025-10-11 19:51:35] 2025-10-11 23:51:12,083 | INFO     | all workflow threads have been joined
[2025-10-11 19:51:35] 2025-10-11 23:51:12,087 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 19:51:35] 2025-10-11 23:51:12,088 | INFO     | traces error code: 0
[2025-10-11 19:51:35] 2025-10-11 23:51:12,089 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 19:51:35] 2025-10-11 23:51:14,164 [wrapper] ==== pilot stdout END ====
[2025-10-11 19:51:35] 2025-10-11 23:51:14,185 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 19:51:35] 2025-10-11 23:51:14,195 [wrapper] pilotpid: 1236635
[2025-10-11 19:51:35] 2025-10-11 23:51:14,203 [wrapper] Pilot exit status: 0
[2025-10-11 19:51:35] 2025-10-11 23:51:14,394 [wrapper] pandaids: 6838363712
[2025-10-11 19:51:35] 2025-10-11 23:51:16,224 [wrapper] cleanup supervisor_pilot 2737793 1236636
[2025-10-11 19:51:35] 2025-10-11 23:51:16,312 [wrapper] Test setup, not cleaning
[2025-10-11 19:51:35] 2025-10-11 23:51:16,352 [wrapper] apfmon messages muted
[2025-10-11 19:51:35] 2025-10-11 23:51:16,400 [wrapper] ==== wrapper stdout END ====
[2025-10-11 19:51:35] 2025-10-11 23:51:16,438 [wrapper] ==== wrapper stderr END ====
[2025-10-11 19:51:35]  *** Error codes and diagnostics ***
[2025-10-11 19:51:35]     "exeErrorCode": 0,
[2025-10-11 19:51:35]     "exeErrorDiag": "",
[2025-10-11 19:51:35]     "pilotErrorCode": 0,
[2025-10-11 19:51:35]     "pilotErrorDiag": "",
[2025-10-11 19:51:35]  *** Listing of results directory ***
[2025-10-11 19:51:35] total 415324
[2025-10-11 19:51:35] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 06:16 pilot3.tar.gz
[2025-10-11 19:51:35] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 06:31 queuedata.json
[2025-10-11 19:51:35] -rwx------. 1 boincer umatlas     36292 Oct 11 06:31 runpilot2-wrapper.sh
[2025-10-11 19:51:35] -rw-r--r--. 1 boincer umatlas       100 Oct 11 10:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 19:51:35] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 10:21 run_atlas
[2025-10-11 19:51:35] -rw-r--r--. 1 boincer umatlas       105 Oct 11 10:21 job.xml
[2025-10-11 19:51:35] -rw-r--r--. 2 boincer umatlas 220524142 Oct 11 10:21 EVNT.46676267._002262.pool.root.1
[2025-10-11 19:51:35] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 10:21 start_atlas.sh
[2025-10-11 19:51:35] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 10:21 shared
[2025-10-11 19:51:35] -rw-r--r--. 2 boincer umatlas    569679 Oct 11 10:21 input.tar.gz
[2025-10-11 19:51:35] -rw-r--r--. 1 boincer umatlas         0 Oct 11 10:21 boinc_lockfile
[2025-10-11 19:51:35] -rw-r--r--. 1 boincer umatlas      2547 Oct 11 10:22 pandaJob.out
[2025-10-11 19:51:35] -rw-------. 1 boincer umatlas    975536 Oct 11 10:23 agis_schedconf.cvmfs.json
[2025-10-11 19:51:35] drwx------. 5 boincer umatlas      4096 Oct 11 10:24 pilot3
[2025-10-11 19:51:35] -rw-------. 1 boincer umatlas 193155711 Oct 11 19:43 HITS.46676269._056208.pool.root.1
[2025-10-11 19:51:35] -rw-r--r--. 1 boincer umatlas       532 Oct 11 19:44 boinc_task_state.xml
[2025-10-11 19:51:35] -rw-r--r--. 1 boincer umatlas      6860 Oct 11 19:46 init_data.xml
[2025-10-11 19:51:35] -rw-------. 1 boincer umatlas      1045 Oct 11 19:49 memory_monitor_summary.json
[2025-10-11 19:51:35] -rw-------. 1 boincer umatlas   1560580 Oct 11 19:49 agis_ddmendpoints.agis.ALL.json
[2025-10-11 19:51:35] -rw-------. 1 boincer umatlas    644729 Oct 11 19:49 log.46676269._056208.job.log.tgz.1
[2025-10-11 19:51:35] -rw-------. 1 boincer umatlas      7839 Oct 11 19:50 heartbeat.json
[2025-10-11 19:51:35] -rw-------. 1 boincer umatlas        95 Oct 11 19:51 pilot_heartbeat.json
[2025-10-11 19:51:35] -rw-------. 1 boincer umatlas      4824 Oct 11 19:51 pilotlog.txt
[2025-10-11 19:51:35] -rw-------. 1 boincer umatlas   3210216 Oct 11 19:51 log.46676269._056208.job.log.1
[2025-10-11 19:51:35] -rw-------. 1 boincer umatlas       357 Oct 11 19:51 output.list
[2025-10-11 19:51:35] -rw-r--r--. 1 boincer umatlas       620 Oct 11 19:51 runtime_log
[2025-10-11 19:51:35] -rw-------. 1 boincer umatlas   3870720 Oct 11 19:51 result.tar.gz
[2025-10-11 19:51:35] -rw-r--r--. 1 boincer umatlas      8714 Oct 11 19:51 runtime_log.err
[2025-10-11 19:51:35] -rw-------. 1 boincer umatlas       662 Oct 11 19:51 abBMDmG4lR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmuDgNDmdig6Yn.diag
[2025-10-11 19:51:35] -rw-r--r--. 1 boincer umatlas        29 Oct 11 19:51 wrapper_checkpoint.txt
[2025-10-11 19:51:35] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 19:51 boinc_mmap_file
[2025-10-11 19:51:35] -rw-r--r--. 1 boincer umatlas     21087 Oct 11 19:51 stderr.txt
[2025-10-11 19:51:36] HITS file was successfully produced:
[2025-10-11 19:51:36] -rw-------. 1 boincer umatlas 193155711 Oct 11 19:43 shared/HITS.pool.root.1
[2025-10-11 19:51:36]  *** Contents of shared directory: ***
[2025-10-11 19:51:36] total 408352
[2025-10-11 19:51:36] -rw-r--r--. 2 boincer umatlas 220524142 Oct 11 10:21 ATLAS.root_0
[2025-10-11 19:51:36] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 10:21 start_atlas.sh
[2025-10-11 19:51:36] -rw-r--r--. 2 boincer umatlas    569679 Oct 11 10:21 input.tar.gz
[2025-10-11 19:51:36] -rw-------. 1 boincer umatlas 193155711 Oct 11 19:43 HITS.pool.root.1
[2025-10-11 19:51:36] -rw-------. 1 boincer umatlas   3870720 Oct 11 19:51 result.tar.gz
19:51:37 (1228912): run_atlas exited; CPU time 112045.387076
19:51:37 (1228912): called boinc_finish(0)

</stderr_txt>
]]>

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