Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
13:29:44 (757549): wrapper (7.7.26015): starting
13:29:44 (757549): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 13:29:44] Arguments: --nthreads 12
[2025-10-11 13:29:44] Threads: 12
[2025-10-11 13:29:44] Checking for CVMFS
[2025-10-11 13:29:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 13:29:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 13:29:44] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 13:29:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 13:29:45] 2.11.0.0 3299214 1683 84788 151585 3 188 5140272 6144000 14593 130560 0 33178320 100.000 61876 206 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-11 13:29:45] CVMFS is ok
[2025-10-11 13:29:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 13:29:45] Checking for apptainer binary...
[2025-10-11 13:29:45] apptainer is not installed, using version from CVMFS
[2025-10-11 13:29:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 13:29:45] radiat0r
[2025-10-11 13:29:45] apptainer works
[2025-10-11 13:29:45] Set ATHENA_PROC_NUMBER=12
[2025-10-11 13:29:45] Set ATHENA_CORE_NUMBER=12
[2025-10-11 13:29:45] Starting ATLAS job with PandaID=6837932363
[2025-10-11 13:29:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 14:27:11]  *** The last 200 lines of the pilot log: ***
[2025-10-11 14:27:11]  storage_token=
[2025-10-11 14:27:11]  surl=/var/lib/boinc/slots/11/PanDA_Pilot-6837932363/log.46676269._048881.job.log.tgz.1
[2025-10-11 14:27:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b3/8a/log.46676269._048881.job.log.tgz.1
[2025-10-11 14:27:11]  workdir=None
[2025-10-11 14:27:11] ]
[2025-10-11 14:27:11] 2025-10-11 14:26:08,073 | INFO     | transferring file log.46676269._048881.job.log.tgz.1 from /var/lib/boinc/slots/11/PanDA_Pilot-6837932363/log.46676269._048881.job.log.tgz.1 to /var/lib/boinc/slots
[2025-10-11 14:27:11] 2025-10-11 14:26:08,073 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/11/PanDA_Pilot-6837932363/log.46676269._048881.job.log.tgz.1 /var/lib/boinc/slots/11/log.46676269._048881.j
[2025-10-11 14:27:11] 2025-10-11 14:26:08,102 | INFO     | adding to output.list: log.46676269._048881.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b3/8a/log.46676269._048881.job.log.tg
[2025-10-11 14:27:11] 2025-10-11 14:26:08,103 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 14:27:11] 2025-10-11 14:26:08,104 | INFO     | summary of transferred files:
[2025-10-11 14:27:11] 2025-10-11 14:26:08,104 | INFO     |  -- lfn=log.46676269._048881.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 14:27:11] 2025-10-11 14:26:08,104 | INFO     | stage-out finished correctly
[2025-10-11 14:27:11] 2025-10-11 14:26:08,882 | INFO     | time since job start (3368s) is within the limit (172800.0s)
[2025-10-11 14:27:11] 2025-10-11 14:26:09,402 | INFO     | monitor loop #235: job 0:6837932363 is in state 'finished'
[2025-10-11 14:27:11] 2025-10-11 14:26:09,402 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 14:27:11] 2025-10-11 14:26:10,419 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 14:27:11] 2025-10-11 14:26:10,887 | INFO     | time since job start (3370s) is within the limit (172800.0s)
[2025-10-11 14:27:11] 2025-10-11 14:26:11,055 | INFO     | job 6837932363 has state=finished
[2025-10-11 14:27:11] 2025-10-11 14:26:11,055 | INFO     | preparing for final server update for job 6837932363 in state='finished'
[2025-10-11 14:27:11] 2025-10-11 14:26:11,055 | INFO     | this job has now completed (state=finished)
[2025-10-11 14:27:11] 2025-10-11 14:26:11,056 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 14:27:11] 2025-10-11 14:26:11,056 | INFO     | log transfer has been attempted: DONE
[2025-10-11 14:27:11] 2025-10-11 14:26:11,056 | INFO     | job 6837932363 has finished - writing final server update
[2025-10-11 14:27:11] 2025-10-11 14:26:11,056 | INFO     | total number of processed events: 400 (read)
[2025-10-11 14:27:11] 2025-10-11 14:26:11,057 | INFO     | executing command: lscpu
[2025-10-11 14:27:11] 2025-10-11 14:26:11,204 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 14:27:11] 2025-10-11 14:26:11,905 | INFO     | monitor loop #236: job 0:6837932363 is in state 'finished'
[2025-10-11 14:27:11] 2025-10-11 14:26:11,906 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 14:27:11] 2025-10-11 14:26:12,892 | INFO     | time since job start (3372s) is within the limit (172800.0s)
[2025-10-11 14:27:11] 2025-10-11 14:26:14,409 | INFO     | monitor loop #237: job 0:6837932363 is in state 'finished'
[2025-10-11 14:27:11] 2025-10-11 14:26:14,409 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 14:27:11] 2025-10-11 14:26:14,894 | INFO     | time since job start (3374s) is within the limit (172800.0s)
[2025-10-11 14:27:11] 2025-10-11 14:26:16,899 | INFO     | time since job start (3376s) is within the limit (172800.0s)
[2025-10-11 14:27:11] 2025-10-11 14:26:16,910 | INFO     | monitor loop #238: job 0:6837932363 is in state 'finished'
[2025-10-11 14:27:11] 2025-10-11 14:26:16,910 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 14:27:11] 2025-10-11 14:26:17,982 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 14:27:11] 2025-10-11 14:26:18,045 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 2312.1394921875008
[2025-10-11 14:27:11] 2025-10-11 14:26:18,097 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6837932363/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 14:27:11] 2025-10-11 14:26:18,098 | INFO     | extracted standard info from prmon json
[2025-10-11 14:27:11] 2025-10-11 14:26:18,099 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 14:27:11] 2025-10-11 14:26:18,099 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 14:27:11] 2025-10-11 14:26:18,099 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 14:27:11] 2025-10-11 14:26:18,099 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 14:27:11] 2025-10-11 14:26:18,100 | INFO     | fitting pss+swap vs Time
[2025-10-11 14:27:11] 2025-10-11 14:26:18,101 | INFO     | sum of square deviations: 34277852.0
[2025-10-11 14:27:11] 2025-10-11 14:26:18,101 | INFO     | sum of deviations: -264449609.5
[2025-10-11 14:27:11] 2025-10-11 14:26:18,101 | INFO     | mean x: 1760191169.5
[2025-10-11 14:27:11] 2025-10-11 14:26:18,101 | INFO     | mean y: 2674588.4375
[2025-10-11 14:27:11] 2025-10-11 14:26:18,101 | INFO     | -- intersect: 13582343099.160496
[2025-10-11 14:27:11] 2025-10-11 14:26:18,101 | INFO     | intersect: 13582343099.160496
[2025-10-11 14:27:11] 2025-10-11 14:26:18,102 | INFO     | chi2: 0.0017317387958678773
[2025-10-11 14:27:11] 2025-10-11 14:26:18,102 | INFO     | -- intersect: 13582343099.160496
[2025-10-11 14:27:11] 2025-10-11 14:26:18,102 | INFO     | current memory leak: -7.71 B/s (using 48 data points, chi2=0.00)
[2025-10-11 14:27:11] 2025-10-11 14:26:18,102 | INFO     | could have reported an average CPU frequency of 2290 MHz (5 samples)
[2025-10-11 14:27:11] 2025-10-11 14:26:18,102 | INFO     | ..............................
[2025-10-11 14:27:11] 2025-10-11 14:26:18,102 | INFO     | . Timing measurements:
[2025-10-11 14:27:11] 2025-10-11 14:26:18,103 | INFO     | . get job = 0 s
[2025-10-11 14:27:11] 2025-10-11 14:26:18,103 | INFO     | . initial setup = 3 s
[2025-10-11 14:27:11] 2025-10-11 14:26:18,103 | INFO     | . payload setup = 7 s
[2025-10-11 14:27:11] 2025-10-11 14:26:18,103 | INFO     | . stage-in = 0 s
[2025-10-11 14:27:11] 2025-10-11 14:26:18,103 | INFO     | . payload execution = 3338 s
[2025-10-11 14:27:11] 2025-10-11 14:26:18,103 | INFO     | . stage-out = 0 s
[2025-10-11 14:27:11] 2025-10-11 14:26:18,103 | INFO     | . log creation = 0 s
[2025-10-11 14:27:11] 2025-10-11 14:26:18,103 | INFO     | ..............................
[2025-10-11 14:27:11] 2025-10-11 14:26:18,201 | INFO     | 
[2025-10-11 14:27:11] 2025-10-11 14:26:18,202 | INFO     | job summary report
[2025-10-11 14:27:11] 2025-10-11 14:26:18,202 | INFO     | --------------------------------------------------
[2025-10-11 14:27:11] 2025-10-11 14:26:18,202 | INFO     | PanDA job id: 6837932363
[2025-10-11 14:27:11] 2025-10-11 14:26:18,202 | INFO     | task id: 46676269
[2025-10-11 14:27:11] 2025-10-11 14:26:18,202 | INFO     | errors: (none)
[2025-10-11 14:27:11] 2025-10-11 14:26:18,203 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 14:27:11] 2025-10-11 14:26:18,203 | INFO     | pilot state: finished 
[2025-10-11 14:27:11] 2025-10-11 14:26:18,203 | INFO     | transexitcode: 0
[2025-10-11 14:27:11] 2025-10-11 14:26:18,203 | INFO     | exeerrorcode: 0
[2025-10-11 14:27:11] 2025-10-11 14:26:18,203 | INFO     | exeerrordiag: 
[2025-10-11 14:27:11] 2025-10-11 14:26:18,203 | INFO     | exitcode: 0
[2025-10-11 14:27:11] 2025-10-11 14:26:18,203 | INFO     | exitmsg: OK
[2025-10-11 14:27:11] 2025-10-11 14:26:18,203 | INFO     | cpuconsumptiontime: 36075 s
[2025-10-11 14:27:11] 2025-10-11 14:26:18,203 | INFO     | nevents: 400
[2025-10-11 14:27:11] 2025-10-11 14:26:18,203 | INFO     | neventsw: 0
[2025-10-11 14:27:11] 2025-10-11 14:26:18,204 | INFO     | pid: 770491
[2025-10-11 14:27:11] 2025-10-11 14:26:18,204 | INFO     | pgrp: 770491
[2025-10-11 14:27:11] 2025-10-11 14:26:18,204 | INFO     | corecount: 12
[2025-10-11 14:27:11] 2025-10-11 14:26:18,204 | INFO     | event service: False
[2025-10-11 14:27:11] 2025-10-11 14:26:18,204 | INFO     | sizes: {0: 2348029, 1: 2348886, 7: 2349148, 12: 2349176, 3349: 2374978, 3351: 2383978, 3353: 2384162, 3361: 2384388}
[2025-10-11 14:27:11] 2025-10-11 14:26:18,204 | INFO     | --------------------------------------------------
[2025-10-11 14:27:11] 2025-10-11 14:26:18,204 | INFO     | 
[2025-10-11 14:27:11] 2025-10-11 14:26:18,204 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-10-11 14:27:11] 2025-10-11 14:26:18,231 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 14:27:11] 2025-10-11 14:26:18,231 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 14:27:11] 2025-10-11 14:26:18,231 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 14:27:11] 2025-10-11 14:26:18,231 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 14:27:11] 2025-10-11 14:26:18,232 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 14:27:11] 2025-10-11 14:26:18,232 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 14:27:11] 2025-10-11 14:26:18,232 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 14:27:11] 2025-10-11 14:26:18,232 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 14:27:11] 2025-10-11 14:26:18,232 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 14:27:11] 2025-10-11 14:26:18,232 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 14:27:11] 2025-10-11 14:26:18,232 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 14:27:11] 2025-10-11 14:26:18,232 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 14:27:11] 2025-10-11 14:26:18,232 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 14:27:11] 2025-10-11 14:26:18,232 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 14:27:11] 2025-10-11 14:26:18,233 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 14:27:11] 2025-10-11 14:26:18,233 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 14:27:11] 2025-10-11 14:26:18,233 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 14:27:11] 2025-10-11 14:26:18,233 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 14:27:11] 2025-10-11 14:26:18,233 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 14:27:11] 2025-10-11 14:26:18,233 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 14:27:11] 2025-10-11 14:26:18,233 | INFO     | job 6837932363 has completed (purged errors)
[2025-10-11 14:27:11] 2025-10-11 14:26:18,233 | INFO     | overall cleanup function is called
[2025-10-11 14:27:11] 2025-10-11 14:26:19,242 | INFO     | --- collectZombieJob: --- 10, [770491]
[2025-10-11 14:27:11] 2025-10-11 14:26:19,243 | INFO     | zombie collector waiting for pid 770491
[2025-10-11 14:27:11] 2025-10-11 14:26:19,243 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 14:27:11] 2025-10-11 14:26:19,243 | INFO     | collected zombie processes
[2025-10-11 14:27:11] 2025-10-11 14:26:19,243 | INFO     | will attempt to kill all subprocesses of pid=770491
[2025-10-11 14:27:11] 2025-10-11 14:26:20,066 | INFO     | process IDs to be killed: [770491] (in reverse order)
[2025-10-11 14:27:11] 2025-10-11 14:26:20,323 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 14:27:11] 2025-10-11 14:26:20,324 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 14:27:11] 2025-10-11 14:26:20,352 | INFO     | did not find any defunct processes belonging to 770491
[2025-10-11 14:27:11] 2025-10-11 14:26:20,379 | INFO     | did not find any defunct processes belonging to 770491
[2025-10-11 14:27:11] 2025-10-11 14:26:20,379 | INFO     | ready for new job
[2025-10-11 14:27:11] 2025-10-11 14:26:20,379 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 14:27:11] 2025-10-11 14:26:20,381 | INFO     | ***************************************
[2025-10-11 14:27:11] 2025-10-11 14:26:20,381 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 14:27:11] 2025-10-11 14:26:20,381 | INFO     | ***************************************
[2025-10-11 14:27:11] 2025-10-11 14:26:20,381 | INFO     | 
[2025-10-11 14:27:11] 2025-10-11 14:26:20,417 | INFO     | architecture information:
[2025-10-11 14:27:11] 2025-10-11 14:26:20,417 | INFO     | executing command: cat /etc/os-release
[2025-10-11 14:27:11] 2025-10-11 14:26:20,437 | INFO     | cat /etc/os-release:
[2025-10-11 14:27:11] NAME="CentOS Linux"
[2025-10-11 14:27:11] VERSION="7 (Core)"
[2025-10-11 14:27:11] ID="centos"
[2025-10-11 14:27:11] ID_LIKE="rhel fedora"
[2025-10-11 14:27:11] VERSION_ID="7"
[2025-10-11 14:27:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 14:27:11] ANSI_COLOR="0;31"
[2025-10-11 14:27:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 14:27:11] HOME_URL="https://www.centos.org/"
[2025-10-11 14:27:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 14:27:11] 
[2025-10-11 14:27:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 14:27:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 14:27:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 14:27:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 14:27:11] 
[2025-10-11 14:27:11] 2025-10-11 14:26:20,438 | INFO     | ***************************************
[2025-10-11 14:27:11] 2025-10-11 14:26:20,939 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-10-11 14:27:11] 2025-10-11 14:26:20,966 | INFO     | sufficient remaining disk space (1725395107840 B)
[2025-10-11 14:27:11] 2025-10-11 14:26:20,966 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 14:27:11] 2025-10-11 14:26:20,966 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 14:27:11] 2025-10-11 14:26:20,966 | INFO     | update_server=False
[2025-10-11 14:27:11] 2025-10-11 14:26:20,967 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 14:27:11] 2025-10-11 14:26:20,967 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 14:27:11] 2025-10-11 14:26:20,967 | INFO     | aborting loop
[2025-10-11 14:27:11] 2025-10-11 14:26:21,014 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 14:27:11] 2025-10-11 14:26:21,222 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 14:27:11] 2025-10-11 14:26:21,799 | INFO     | all data control threads have been joined
[2025-10-11 14:27:11] 2025-10-11 14:26:21,830 | INFO     | all payload control threads have been joined
[2025-10-11 14:27:11] 2025-10-11 14:26:21,850 | INFO     | all job control threads have been joined
[2025-10-11 14:27:11] 2025-10-11 14:26:21,970 | INFO     | [job] retrieve thread has finished
[2025-10-11 14:27:11] 2025-10-11 14:26:21,971 | INFO     | [job] job monitor thread has finished
[2025-10-11 14:27:11] 2025-10-11 14:26:22,078 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 14:27:11] 2025-10-11 14:26:22,346 | INFO     | [data] copytool_in thread has finished
[2025-10-11 14:27:11] 2025-10-11 14:26:22,354 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 14:27:11] 2025-10-11 14:26:22,582 | INFO     | [payload] validate_post thread has finished
[2025-10-11 14:27:11] 2025-10-11 14:26:22,805 | INFO     | [data] control thread has finished
[2025-10-11 14:27:11] 2025-10-11 14:26:22,834 | INFO     | [payload] control thread has finished
[2025-10-11 14:27:11] 2025-10-11 14:26:22,854 | INFO     | [job] control thread has finished
[2025-10-11 14:27:11] 2025-10-11 14:26:22,978 | INFO     | [payload] failed_post thread has finished
[2025-10-11 14:27:11] 2025-10-11 14:26:23,090 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 14:27:11] 2025-10-11 14:26:23,210 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 14:27:11] 2025-10-11 14:26:23,228 | INFO     | [data] copytool_out thread has finished
[2025-10-11 14:27:11] 2025-10-11 14:26:23,446 | INFO     | [job] validate thread has finished
[2025-10-11 14:27:11] 2025-10-11 14:26:24,214 | INFO     | [job] queue monitor thread has finished
[2025-10-11 14:27:11] 2025-10-11 14:26:25,018 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 14:27:11] 2025-10-11 14:26:31,723 | INFO     | job.realtimelogging is not enabled
[2025-10-11 14:27:11] 2025-10-11 14:26:32,729 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 14:27:11] 2025-10-11 14:26:50,912 | INFO     | PID=762297 has CPU usage=10.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 14:27:11] 2025-10-11 14:26:50,912 | INFO     | .. there are 17 such processes running
[2025-10-11 14:27:11] 2025-10-11 14:26:50,913 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 14:27:11] 2025-10-11 14:26:50,913 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 14:27:11] 2025-10-11 14:26:50,913 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 14:27:11] 2025-10-11 14:27:04,690 | INFO     | [monitor] cgroup control has ended
[2025-10-11 14:27:11] 2025-10-11 14:27:05,695 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140011877680960)>', '<ExcThread(monitor, started 140011650377472)>']
[2025-10-11 14:27:11] 2025-10-11 14:27:05,974 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 14:27:11] 2025-10-11 14:27:05,975 | INFO     | [monitor] control thread has ended
[2025-10-11 14:27:11] 2025-10-11 14:27:10,721 | INFO     | all workflow threads have been joined
[2025-10-11 14:27:11] 2025-10-11 14:27:10,721 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 14:27:11] 2025-10-11 14:27:10,722 | INFO     | traces error code: 0
[2025-10-11 14:27:11] 2025-10-11 14:27:10,722 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 14:27:11] 2025-10-11 14:27:10,866 [wrapper] ==== pilot stdout END ====
[2025-10-11 14:27:11] 2025-10-11 14:27:10,870 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 14:27:11] 2025-10-11 14:27:10,874 [wrapper] pilotpid: 762297
[2025-10-11 14:27:11] 2025-10-11 14:27:10,877 [wrapper] Pilot exit status: 0
[2025-10-11 14:27:11] 2025-10-11 14:27:10,889 [wrapper] pandaids: 6837932363
[2025-10-11 14:27:11] 2025-10-11 14:27:11,073 [wrapper] cleanup supervisor_pilot 1079475 762298
[2025-10-11 14:27:11] 2025-10-11 14:27:11,077 [wrapper] Test setup, not cleaning
[2025-10-11 14:27:11] 2025-10-11 14:27:11,081 [wrapper] apfmon messages muted
[2025-10-11 14:27:11] 2025-10-11 14:27:11,085 [wrapper] ==== wrapper stdout END ====
[2025-10-11 14:27:11] 2025-10-11 14:27:11,089 [wrapper] ==== wrapper stderr END ====
[2025-10-11 14:27:11]  *** Error codes and diagnostics ***
[2025-10-11 14:27:11]     "exeErrorCode": 0,
[2025-10-11 14:27:11]     "exeErrorDiag": "",
[2025-10-11 14:27:11]     "pilotErrorCode": 0,
[2025-10-11 14:27:11]     "pilotErrorDiag": "",
[2025-10-11 14:27:11]  *** Listing of results directory ***
[2025-10-11 14:27:11] total 413968
[2025-10-11 14:27:11] -rw-r--r-- 1 boinc boinc    557409 Oct 11 01:35 pilot3.tar.gz
[2025-10-11 14:27:11] -rwx------ 1 boinc boinc     36292 Oct 11 01:53 runpilot2-wrapper.sh
[2025-10-11 14:27:11] -rw-r--r-- 1 boinc boinc      5112 Oct 11 01:53 queuedata.json
[2025-10-11 14:27:11] -rw-r--r-- 1 boinc boinc       100 Oct 11 13:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 14:27:11] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 13:29 run_atlas
[2025-10-11 14:27:11] -rw-r--r-- 1 boinc boinc       105 Oct 11 13:29 job.xml
[2025-10-11 14:27:11] -rw-r--r-- 2 boinc boinc 221766638 Oct 11 13:29 EVNT.46676267._001971.pool.root.1
[2025-10-11 14:27:11] -rw-r--r-- 2 boinc boinc     15120 Oct 11 13:29 start_atlas.sh
[2025-10-11 14:27:11] drwxrwx--x 2 boinc boinc      4096 Oct 11 13:29 shared
[2025-10-11 14:27:11] -rw-r--r-- 2 boinc boinc    569675 Oct 11 13:29 input.tar.gz
[2025-10-11 14:27:11] -rw-r--r-- 1 boinc boinc      9396 Oct 11 13:29 init_data.xml
[2025-10-11 14:27:11] -rw-r--r-- 1 boinc boinc         0 Oct 11 13:29 boinc_setup_complete
[2025-10-11 14:27:11] -rw-r--r-- 1 boinc boinc         0 Oct 11 13:29 boinc_lockfile
[2025-10-11 14:27:11] -rw-r--r-- 1 boinc boinc      2550 Oct 11 13:29 pandaJob.out
[2025-10-11 14:27:11] -rw------- 1 boinc boinc    975520 Oct 11 13:29 agis_schedconf.cvmfs.json
[2025-10-11 14:27:11] -rw------- 1 boinc boinc   1560580 Oct 11 13:29 agis_ddmendpoints.agis.ALL.json
[2025-10-11 14:27:11] drwx------ 5 boinc boinc      4096 Oct 11 13:30 pilot3
[2025-10-11 14:27:11] -rw-r--r-- 1 boinc boinc       529 Oct 11 14:25 boinc_task_state.xml
[2025-10-11 14:27:11] -rw------- 1 boinc boinc 196481552 Oct 11 14:25 HITS.46676269._048881.pool.root.1
[2025-10-11 14:27:11] -rw------- 1 boinc boinc      1028 Oct 11 14:26 memory_monitor_summary.json
[2025-10-11 14:27:11] -rw------- 1 boinc boinc    371861 Oct 11 14:26 log.46676269._048881.job.log.tgz.1
[2025-10-11 14:27:11] -rw------- 1 boinc boinc      7742 Oct 11 14:26 heartbeat.json
[2025-10-11 14:27:11] -rw------- 1 boinc boinc        95 Oct 11 14:26 pilot_heartbeat.json
[2025-10-11 14:27:11] -rw-r--r-- 1 boinc boinc      8192 Oct 11 14:27 boinc_mmap_file
[2025-10-11 14:27:11] -rw-r--r-- 1 boinc boinc        27 Oct 11 14:27 wrapper_checkpoint.txt
[2025-10-11 14:27:11] -rw------- 1 boinc boinc      4899 Oct 11 14:27 pilotlog.txt
[2025-10-11 14:27:11] -rw------- 1 boinc boinc    496150 Oct 11 14:27 log.46676269._048881.job.log.1
[2025-10-11 14:27:11] -rw------- 1 boinc boinc       357 Oct 11 14:27 output.list
[2025-10-11 14:27:11] -rw-r--r-- 1 boinc boinc       620 Oct 11 14:27 runtime_log
[2025-10-11 14:27:11] -rw------- 1 boinc boinc    890880 Oct 11 14:27 result.tar.gz
[2025-10-11 14:27:11] -rw------- 1 boinc boinc       643 Oct 11 14:27 wHCNDmgydR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmNwQMDmpVlj4n.diag
[2025-10-11 14:27:11] -rw-r--r-- 1 boinc boinc      8672 Oct 11 14:27 runtime_log.err
[2025-10-11 14:27:11] -rw-r--r-- 1 boinc boinc     21878 Oct 11 14:27 stderr.txt
[2025-10-11 14:27:11] HITS file was successfully produced:
[2025-10-11 14:27:11] -rw------- 1 boinc boinc 196481552 Oct 11 14:25 shared/HITS.pool.root.1
[2025-10-11 14:27:11]  *** Contents of shared directory: ***
[2025-10-11 14:27:11] total 409908
[2025-10-11 14:27:11] -rw-r--r-- 2 boinc boinc 221766638 Oct 11 13:29 ATLAS.root_0
[2025-10-11 14:27:11] -rw-r--r-- 2 boinc boinc     15120 Oct 11 13:29 start_atlas.sh
[2025-10-11 14:27:11] -rw-r--r-- 2 boinc boinc    569675 Oct 11 13:29 input.tar.gz
[2025-10-11 14:27:11] -rw------- 1 boinc boinc 196481552 Oct 11 14:25 HITS.pool.root.1
[2025-10-11 14:27:11] -rw------- 1 boinc boinc    890880 Oct 11 14:27 result.tar.gz
14:27:12 (757549): run_atlas exited; CPU time 36266.018405
14:27:12 (757549): called boinc_finish(0)

</stderr_txt>
]]>

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