Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:37:41 (9188): wrapper (7.7.26015): starting
08:37:41 (9188): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 08:37:41] Arguments: --nthreads 12
[2025-10-11 08:37:41] Threads: 12
[2025-10-11 08:37:41] Checking for CVMFS
[2025-10-11 08:37:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 08:37:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 08:37:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 08:37:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 08:37:41] 2.11.2.0 2987 221405 98036 151584 2 59 13047139 20275201 1 130560 1 106988557 99.984 13345203 12199 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 08:37:41] CVMFS is ok
[2025-10-11 08:37:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 08:37:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 08:37:41] Further information can be found at the LHC@home message board.
[2025-10-11 08:37:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 08:37:41] Checking for apptainer binary...
[2025-10-11 08:37:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 08:37:41] Running /usr/bin/apptainer --version
[2025-10-11 08:37:41] apptainer version 1.3.2-1.el7
[2025-10-11 08:37:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 08:37:43] c-205-19.aglt2.org
[2025-10-11 08:37:43] apptainer works
[2025-10-11 08:37:43] Set ATHENA_PROC_NUMBER=12
[2025-10-11 08:37:43] Set ATHENA_CORE_NUMBER=12
[2025-10-11 08:37:43] Starting ATLAS job with PandaID=6838295092
[2025-10-11 08:37:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 09:53:11]  *** The last 200 lines of the pilot log: ***
[2025-10-11 09:53:11]  storage_token=
[2025-10-11 09:53:11]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6838295092/log.46676269._055886.job.log.tgz.1
[2025-10-11 09:53:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/24/e3/log.46676269._055886.job.log.tgz.1
[2025-10-11 09:53:11]  workdir=None
[2025-10-11 09:53:11] ]
[2025-10-11 09:53:11] 2025-10-11 13:52:27,043 | INFO     | transferring file log.46676269._055886.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6838295092/log.46676269._055886.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-11 09:53:11] 2025-10-11 13:52:27,043 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6838295092/log.46676269._055886.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._055886.job
[2025-10-11 09:53:11] 2025-10-11 13:52:27,065 | INFO     | adding to output.list: log.46676269._055886.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/24/e3/log.46676269._055886.job.log.tg
[2025-10-11 09:53:11] 2025-10-11 13:52:27,066 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 09:53:11] 2025-10-11 13:52:27,067 | INFO     | summary of transferred files:
[2025-10-11 09:53:11] 2025-10-11 13:52:27,067 | INFO     |  -- lfn=log.46676269._055886.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 09:53:11] 2025-10-11 13:52:27,067 | INFO     | stage-out finished correctly
[2025-10-11 09:53:11] 2025-10-11 13:52:27,292 | INFO     | time since job start (4470s) is within the limit (172800.0s)
[2025-10-11 09:53:11] 2025-10-11 13:52:27,624 | INFO     | monitor loop #332: job 0:6838295092 is in state 'finished'
[2025-10-11 09:53:11] 2025-10-11 13:52:27,624 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 09:53:11] 2025-10-11 13:52:29,297 | INFO     | time since job start (4472s) is within the limit (172800.0s)
[2025-10-11 09:53:11] 2025-10-11 13:52:29,438 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 09:53:11] 2025-10-11 13:52:30,127 | INFO     | monitor loop #333: job 0:6838295092 is in state 'finished'
[2025-10-11 09:53:11] 2025-10-11 13:52:30,128 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 09:53:11] 2025-10-11 13:52:31,303 | INFO     | time since job start (4474s) is within the limit (172800.0s)
[2025-10-11 09:53:11] 2025-10-11 13:52:32,169 | INFO     | job 6838295092 has state=finished
[2025-10-11 09:53:11] 2025-10-11 13:52:32,169 | INFO     | preparing for final server update for job 6838295092 in state='finished'
[2025-10-11 09:53:11] 2025-10-11 13:52:32,170 | INFO     | this job has now completed (state=finished)
[2025-10-11 09:53:11] 2025-10-11 13:52:32,170 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 09:53:11] 2025-10-11 13:52:32,170 | INFO     | log transfer has been attempted: DONE
[2025-10-11 09:53:11] 2025-10-11 13:52:32,170 | INFO     | job 6838295092 has finished - writing final server update
[2025-10-11 09:53:11] 2025-10-11 13:52:32,171 | INFO     | total number of processed events: 400 (read)
[2025-10-11 09:53:11] 2025-10-11 13:52:32,172 | INFO     | executing command: lscpu
[2025-10-11 09:53:11] 2025-10-11 13:52:32,198 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 09:53:11] 2025-10-11 13:52:32,630 | INFO     | monitor loop #334: job 0:6838295092 is in state 'finished'
[2025-10-11 09:53:11] 2025-10-11 13:52:32,630 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 09:53:11] 2025-10-11 13:52:33,309 | INFO     | time since job start (4476s) is within the limit (172800.0s)
[2025-10-11 09:53:11] 2025-10-11 13:52:35,133 | INFO     | monitor loop #335: job 0:6838295092 is in state 'finished'
[2025-10-11 09:53:11] 2025-10-11 13:52:35,133 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 09:53:11] 2025-10-11 13:52:35,314 | INFO     | time since job start (4478s) is within the limit (172800.0s)
[2025-10-11 09:53:11] 2025-10-11 13:52:36,944 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-11 09:53:11] 2025-10-11 13:52:36,947 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-10-11 09:53:11] 2025-10-11 13:52:36,949 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838295092/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 09:53:11] 2025-10-11 13:52:36,949 | INFO     | extracted standard info from prmon json
[2025-10-11 09:53:11] 2025-10-11 13:52:36,950 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 09:53:11] 2025-10-11 13:52:36,950 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 09:53:11] 2025-10-11 13:52:36,950 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 09:53:11] 2025-10-11 13:52:36,950 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 09:53:11] 2025-10-11 13:52:36,952 | INFO     | fitting pss+swap vs Time
[2025-10-11 09:53:11] 2025-10-11 13:52:36,952 | INFO     | sum of square deviations: 89127252.5
[2025-10-11 09:53:11] 2025-10-11 13:52:36,952 | INFO     | sum of deviations: -8520532246.500001
[2025-10-11 09:53:11] 2025-10-11 13:52:36,952 | INFO     | mean x: 1760188594.5
[2025-10-11 09:53:11] 2025-10-11 13:52:36,952 | INFO     | mean y: 2806678.742424242
[2025-10-11 09:53:11] 2025-10-11 13:52:36,953 | INFO     | -- intersect: 168276182763.7818
[2025-10-11 09:53:11] 2025-10-11 13:52:36,953 | INFO     | intersect: 168276182763.7818
[2025-10-11 09:53:11] 2025-10-11 13:52:36,953 | INFO     | chi2: 0.05028398942015923
[2025-10-11 09:53:11] 2025-10-11 13:52:36,953 | INFO     | -- intersect: 168276182763.7818
[2025-10-11 09:53:11] 2025-10-11 13:52:36,953 | INFO     | current memory leak: -95.60 B/s (using 66 data points, chi2=0.05)
[2025-10-11 09:53:11] 2025-10-11 13:52:36,953 | INFO     | could have reported an average CPU frequency of 2072 MHz (6 samples)
[2025-10-11 09:53:11] 2025-10-11 13:52:36,954 | INFO     | ..............................
[2025-10-11 09:53:11] 2025-10-11 13:52:36,954 | INFO     | . Timing measurements:
[2025-10-11 09:53:11] 2025-10-11 13:52:36,954 | INFO     | . get job = 0 s
[2025-10-11 09:53:11] 2025-10-11 13:52:36,954 | INFO     | . initial setup = 2 s
[2025-10-11 09:53:11] 2025-10-11 13:52:36,954 | INFO     | . payload setup = 7 s
[2025-10-11 09:53:11] 2025-10-11 13:52:36,954 | INFO     | . stage-in = 0 s
[2025-10-11 09:53:11] 2025-10-11 13:52:36,954 | INFO     | . payload execution = 4441 s
[2025-10-11 09:53:11] 2025-10-11 13:52:36,954 | INFO     | . stage-out = 0 s
[2025-10-11 09:53:11] 2025-10-11 13:52:36,954 | INFO     | . log creation = 0 s
[2025-10-11 09:53:11] 2025-10-11 13:52:36,954 | INFO     | ..............................
[2025-10-11 09:53:11] 2025-10-11 13:52:37,199 | INFO     | 
[2025-10-11 09:53:11] 2025-10-11 13:52:37,200 | INFO     | job summary report
[2025-10-11 09:53:11] 2025-10-11 13:52:37,200 | INFO     | --------------------------------------------------
[2025-10-11 09:53:11] 2025-10-11 13:52:37,200 | INFO     | PanDA job id: 6838295092
[2025-10-11 09:53:11] 2025-10-11 13:52:37,200 | INFO     | task id: 46676269
[2025-10-11 09:53:11] 2025-10-11 13:52:37,200 | INFO     | errors: (none)
[2025-10-11 09:53:11] 2025-10-11 13:52:37,201 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 09:53:11] 2025-10-11 13:52:37,201 | INFO     | pilot state: finished 
[2025-10-11 09:53:11] 2025-10-11 13:52:37,201 | INFO     | transexitcode: 0
[2025-10-11 09:53:11] 2025-10-11 13:52:37,201 | INFO     | exeerrorcode: 0
[2025-10-11 09:53:11] 2025-10-11 13:52:37,201 | INFO     | exeerrordiag: 
[2025-10-11 09:53:11] 2025-10-11 13:52:37,201 | INFO     | exitcode: 0
[2025-10-11 09:53:11] 2025-10-11 13:52:37,202 | INFO     | exitmsg: OK
[2025-10-11 09:53:11] 2025-10-11 13:52:37,202 | INFO     | cpuconsumptiontime: 47331 s
[2025-10-11 09:53:11] 2025-10-11 13:52:37,202 | INFO     | nevents: 400
[2025-10-11 09:53:11] 2025-10-11 13:52:37,202 | INFO     | neventsw: 0
[2025-10-11 09:53:11] 2025-10-11 13:52:37,202 | INFO     | pid: 19283
[2025-10-11 09:53:11] 2025-10-11 13:52:37,202 | INFO     | pgrp: 19283
[2025-10-11 09:53:11] 2025-10-11 13:52:37,203 | INFO     | corecount: 12
[2025-10-11 09:53:11] 2025-10-11 13:52:37,203 | INFO     | event service: False
[2025-10-11 09:53:11] 2025-10-11 13:52:37,203 | INFO     | sizes: {0: 2348743, 1: 2348885, 6: 2349147, 11: 2349175, 4452: 2375252, 4453: 2384250, 4456: 2384434, 4463: 2384628}
[2025-10-11 09:53:11] 2025-10-11 13:52:37,203 | INFO     | --------------------------------------------------
[2025-10-11 09:53:11] 2025-10-11 13:52:37,203 | INFO     | 
[2025-10-11 09:53:11] 2025-10-11 13:52:37,203 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 09:53:11] 2025-10-11 13:52:37,249 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 09:53:11] 2025-10-11 13:52:37,250 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 09:53:11] 2025-10-11 13:52:37,250 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 09:53:11] 2025-10-11 13:52:37,250 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 09:53:11] 2025-10-11 13:52:37,250 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 09:53:11] 2025-10-11 13:52:37,250 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 09:53:11] 2025-10-11 13:52:37,250 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 09:53:11] 2025-10-11 13:52:37,251 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 09:53:11] 2025-10-11 13:52:37,251 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 09:53:11] 2025-10-11 13:52:37,251 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 09:53:11] 2025-10-11 13:52:37,251 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 09:53:11] 2025-10-11 13:52:37,251 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 09:53:11] 2025-10-11 13:52:37,251 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 09:53:11] 2025-10-11 13:52:37,252 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 09:53:11] 2025-10-11 13:52:37,252 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 09:53:11] 2025-10-11 13:52:37,252 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 09:53:11] 2025-10-11 13:52:37,252 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 09:53:11] 2025-10-11 13:52:37,252 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 09:53:11] 2025-10-11 13:52:37,252 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 09:53:11] 2025-10-11 13:52:37,253 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 09:53:11] 2025-10-11 13:52:37,253 | INFO     | job 6838295092 has completed (purged errors)
[2025-10-11 09:53:11] 2025-10-11 13:52:37,253 | INFO     | overall cleanup function is called
[2025-10-11 09:53:11] 2025-10-11 13:52:38,261 | INFO     | --- collectZombieJob: --- 10, [19283]
[2025-10-11 09:53:11] 2025-10-11 13:52:38,261 | INFO     | zombie collector waiting for pid 19283
[2025-10-11 09:53:11] 2025-10-11 13:52:38,261 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 09:53:11] 2025-10-11 13:52:38,262 | INFO     | collected zombie processes
[2025-10-11 09:53:11] 2025-10-11 13:52:38,262 | INFO     | will attempt to kill all subprocesses of pid=19283
[2025-10-11 09:53:11] 2025-10-11 13:52:38,351 | INFO     | process IDs to be killed: [19283] (in reverse order)
[2025-10-11 09:53:11] 2025-10-11 13:52:38,401 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 09:53:11] 2025-10-11 13:52:38,402 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 09:53:11] 2025-10-11 13:52:38,405 | INFO     | did not find any defunct processes belonging to 19283
[2025-10-11 09:53:11] 2025-10-11 13:52:38,408 | INFO     | did not find any defunct processes belonging to 19283
[2025-10-11 09:53:11] 2025-10-11 13:52:38,408 | INFO     | ready for new job
[2025-10-11 09:53:11] 2025-10-11 13:52:38,408 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 09:53:11] 2025-10-11 13:52:38,409 | INFO     | ***************************************
[2025-10-11 09:53:11] 2025-10-11 13:52:38,409 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 09:53:11] 2025-10-11 13:52:38,410 | INFO     | ***************************************
[2025-10-11 09:53:11] 2025-10-11 13:52:38,410 | INFO     | 
[2025-10-11 09:53:11] 2025-10-11 13:52:38,410 | INFO     | architecture information:
[2025-10-11 09:53:11] 2025-10-11 13:52:38,411 | INFO     | executing command: cat /etc/os-release
[2025-10-11 09:53:11] 2025-10-11 13:52:38,426 | INFO     | cat /etc/os-release:
[2025-10-11 09:53:11] NAME="CentOS Linux"
[2025-10-11 09:53:11] VERSION="7 (Core)"
[2025-10-11 09:53:11] ID="centos"
[2025-10-11 09:53:11] ID_LIKE="rhel fedora"
[2025-10-11 09:53:11] VERSION_ID="7"
[2025-10-11 09:53:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 09:53:11] ANSI_COLOR="0;31"
[2025-10-11 09:53:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 09:53:11] HOME_URL="https://www.centos.org/"
[2025-10-11 09:53:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 09:53:11] 
[2025-10-11 09:53:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 09:53:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 09:53:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 09:53:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 09:53:11] 
[2025-10-11 09:53:11] 2025-10-11 13:52:38,426 | INFO     | ***************************************
[2025-10-11 09:53:11] 2025-10-11 13:52:38,929 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 09:53:11] 2025-10-11 13:52:38,946 | INFO     | sufficient remaining disk space (29363273728 B)
[2025-10-11 09:53:11] 2025-10-11 13:52:38,946 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 09:53:11] 2025-10-11 13:52:38,947 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 09:53:11] 2025-10-11 13:52:38,947 | INFO     | update_server=False
[2025-10-11 09:53:11] 2025-10-11 13:52:38,947 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 09:53:11] 2025-10-11 13:52:38,947 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 09:53:11] 2025-10-11 13:52:38,948 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 09:53:11] 2025-10-11 13:52:38,948 | INFO     | aborting loop
[2025-10-11 09:53:11] 2025-10-11 13:52:39,186 | INFO     | all payload control threads have been joined
[2025-10-11 09:53:11] 2025-10-11 13:52:39,656 | INFO     | all job control threads have been joined
[2025-10-11 09:53:11] 2025-10-11 13:52:39,789 | INFO     | all data control threads have been joined
[2025-10-11 09:53:11] 2025-10-11 13:52:39,949 | INFO     | [job] job monitor thread has finished
[2025-10-11 09:53:11] 2025-10-11 13:52:39,952 | INFO     | [job] queue monitor thread has finished
[2025-10-11 09:53:11] 2025-10-11 13:52:39,952 | INFO     | [job] retrieve thread has finished
[2025-10-11 09:53:11] 2025-10-11 13:52:40,028 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 09:53:11] 2025-10-11 13:52:40,102 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 09:53:11] 2025-10-11 13:52:40,129 | INFO     | [payload] validate_post thread has finished
[2025-10-11 09:53:11] 2025-10-11 13:52:40,170 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 09:53:11] 2025-10-11 13:52:40,189 | INFO     | [payload] control thread has finished
[2025-10-11 09:53:11] 2025-10-11 13:52:40,238 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 09:53:11] 2025-10-11 13:52:40,592 | INFO     | [data] copytool_in thread has finished
[2025-10-11 09:53:11] 2025-10-11 13:52:40,658 | INFO     | [job] control thread has finished
[2025-10-11 09:53:11] 2025-10-11 13:52:40,708 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 09:53:11] 2025-10-11 13:52:40,794 | INFO     | [data] control thread has finished
[2025-10-11 09:53:11] 2025-10-11 13:52:41,154 | INFO     | [payload] failed_post thread has finished
[2025-10-11 09:53:11] 2025-10-11 13:52:41,363 | INFO     | [job] validate thread has finished
[2025-10-11 09:53:11] 2025-10-11 13:52:42,175 | INFO     | [data] copytool_out thread has finished
[2025-10-11 09:53:11] 2025-10-11 13:52:44,030 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 09:53:11] 2025-10-11 13:52:49,622 | INFO     | job.realtimelogging is not enabled
[2025-10-11 09:53:11] 2025-10-11 13:52:50,628 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 09:53:11] 2025-10-11 13:52:55,328 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-10-11 09:53:11] 2025-10-11 13:53:04,516 | INFO     | [monitor] cgroup control has ended
[2025-10-11 09:53:11] 2025-10-11 13:53:06,205 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140313629161280)>', '<ExcThread(monitor, started 140312655673088)>']
[2025-10-11 09:53:11] 2025-10-11 13:53:08,502 | INFO     | PID=12873 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 09:53:11] 2025-10-11 13:53:08,502 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 09:53:11] 2025-10-11 13:53:08,502 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 09:53:11] 2025-10-11 13:53:08,502 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 09:53:11] 2025-10-11 13:53:08,502 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 09:53:11] 2025-10-11 13:53:08,503 | INFO     | [monitor] control thread has ended
[2025-10-11 09:53:11] 2025-10-11 13:53:11,231 | INFO     | all workflow threads have been joined
[2025-10-11 09:53:11] 2025-10-11 13:53:11,231 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 09:53:11] 2025-10-11 13:53:11,231 | INFO     | traces error code: 0
[2025-10-11 09:53:11] 2025-10-11 13:53:11,231 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 09:53:11] 2025-10-11 13:53:11,312 [wrapper] ==== pilot stdout END ====
[2025-10-11 09:53:11] 2025-10-11 13:53:11,316 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 09:53:11] 2025-10-11 13:53:11,320 [wrapper] pilotpid: 12873
[2025-10-11 09:53:11] 2025-10-11 13:53:11,324 [wrapper] Pilot exit status: 0
[2025-10-11 09:53:11] 2025-10-11 13:53:11,340 [wrapper] pandaids: 6838295092
[2025-10-11 09:53:11] 2025-10-11 13:53:11,381 [wrapper] cleanup supervisor_pilot 18883 12874
[2025-10-11 09:53:11] 2025-10-11 13:53:11,385 [wrapper] Test setup, not cleaning
[2025-10-11 09:53:11] 2025-10-11 13:53:11,389 [wrapper] apfmon messages muted
[2025-10-11 09:53:11] 2025-10-11 13:53:11,393 [wrapper] ==== wrapper stdout END ====
[2025-10-11 09:53:11] 2025-10-11 13:53:11,397 [wrapper] ==== wrapper stderr END ====
[2025-10-11 09:53:11]  *** Error codes and diagnostics ***
[2025-10-11 09:53:11]     "exeErrorCode": 0,
[2025-10-11 09:53:11]     "exeErrorDiag": "",
[2025-10-11 09:53:11]     "pilotErrorCode": 0,
[2025-10-11 09:53:11]     "pilotErrorDiag": "",
[2025-10-11 09:53:11]  *** Listing of results directory ***
[2025-10-11 09:53:11] total 414848
[2025-10-11 09:53:11] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 06:07 pilot3.tar.gz
[2025-10-11 09:53:11] -rwx------ 1 boincer umatlas     36292 Oct 11 06:13 runpilot2-wrapper.sh
[2025-10-11 09:53:11] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 06:13 queuedata.json
[2025-10-11 09:53:11] -rw-r--r-- 1 boincer umatlas       100 Oct 11 08:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 09:53:11] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 08:37 run_atlas
[2025-10-11 09:53:11] -rw-r--r-- 1 boincer umatlas       105 Oct 11 08:37 job.xml
[2025-10-11 09:53:11] -rw-r--r-- 2 boincer umatlas 221246939 Oct 11 08:37 EVNT.46676267._002245.pool.root.1
[2025-10-11 09:53:11] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 08:37 start_atlas.sh
[2025-10-11 09:53:11] drwxrwx--x 2 boincer umatlas      4096 Oct 11 08:37 shared
[2025-10-11 09:53:11] -rw-r--r-- 2 boincer umatlas    569676 Oct 11 08:37 input.tar.gz
[2025-10-11 09:53:11] -rw-r--r-- 1 boincer umatlas         0 Oct 11 08:37 boinc_lockfile
[2025-10-11 09:53:11] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 08:37 pandaJob.out
[2025-10-11 09:53:11] -rw------- 1 boincer umatlas    975504 Oct 11 08:37 agis_schedconf.cvmfs.json
[2025-10-11 09:53:11] -rw------- 1 boincer umatlas   1560580 Oct 11 08:37 agis_ddmendpoints.agis.ALL.json
[2025-10-11 09:53:11] drwx------ 5 boincer umatlas      4096 Oct 11 08:37 pilot3
[2025-10-11 09:53:11] -rw-r--r-- 1 boincer umatlas      5952 Oct 11 09:45 init_data.xml
[2025-10-11 09:53:11] -rw------- 1 boincer umatlas 197600093 Oct 11 09:51 HITS.46676269._055886.pool.root.1
[2025-10-11 09:53:11] -rw-r--r-- 1 boincer umatlas       529 Oct 11 09:52 boinc_task_state.xml
[2025-10-11 09:53:11] -rw------- 1 boincer umatlas      1049 Oct 11 09:52 memory_monitor_summary.json
[2025-10-11 09:53:11] -rw------- 1 boincer umatlas    377320 Oct 11 09:52 log.46676269._055886.job.log.tgz.1
[2025-10-11 09:53:11] -rw------- 1 boincer umatlas      7856 Oct 11 09:52 heartbeat.json
[2025-10-11 09:53:11] -rw-r--r-- 1 boincer umatlas        27 Oct 11 09:52 wrapper_checkpoint.txt
[2025-10-11 09:53:11] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 09:52 boinc_mmap_file
[2025-10-11 09:53:11] -rw------- 1 boincer umatlas        95 Oct 11 09:53 pilot_heartbeat.json
[2025-10-11 09:53:11] -rw------- 1 boincer umatlas      4818 Oct 11 09:53 pilotlog.txt
[2025-10-11 09:53:11] -rw------- 1 boincer umatlas    649419 Oct 11 09:53 log.46676269._055886.job.log.1
[2025-10-11 09:53:11] -rw------- 1 boincer umatlas       357 Oct 11 09:53 output.list
[2025-10-11 09:53:11] -rw-r--r-- 1 boincer umatlas       620 Oct 11 09:53 runtime_log
[2025-10-11 09:53:11] -rw------- 1 boincer umatlas   1044480 Oct 11 09:53 result.tar.gz
[2025-10-11 09:53:11] -rw------- 1 boincer umatlas       659 Oct 11 09:53 WuVLDmzmlR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUBgNDmy7TFUm.diag
[2025-10-11 09:53:11] -rw-r--r-- 1 boincer umatlas      8705 Oct 11 09:53 runtime_log.err
[2025-10-11 09:53:11] -rw-r--r-- 1 boincer umatlas     22143 Oct 11 09:53 stderr.txt
[2025-10-11 09:53:11] HITS file was successfully produced:
[2025-10-11 09:53:11] -rw------- 1 boincer umatlas 197600093 Oct 11 09:51 shared/HITS.pool.root.1
[2025-10-11 09:53:11]  *** Contents of shared directory: ***
[2025-10-11 09:53:11] total 410636
[2025-10-11 09:53:11] -rw-r--r-- 2 boincer umatlas 221246939 Oct 11 08:37 ATLAS.root_0
[2025-10-11 09:53:11] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 08:37 start_atlas.sh
[2025-10-11 09:53:11] -rw-r--r-- 2 boincer umatlas    569676 Oct 11 08:37 input.tar.gz
[2025-10-11 09:53:11] -rw------- 1 boincer umatlas 197600093 Oct 11 09:51 HITS.pool.root.1
[2025-10-11 09:53:11] -rw------- 1 boincer umatlas   1044480 Oct 11 09:53 result.tar.gz
09:53:13 (9188): run_atlas exited; CPU time 47299.346829
09:53:13 (9188): called boinc_finish(0)

</stderr_txt>
]]>

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