Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:47:07 (3859715): wrapper (7.7.26015): starting
05:47:07 (3859715): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 05:47:07] Arguments: --nthreads 12
[2025-10-11 05:47:07] Threads: 12
[2025-10-11 05:47:07] Checking for CVMFS
[2025-10-11 05:47:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 05:47:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 05:47:08] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 05:47:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 05:47:08] 2.11.5.0 2461 29706 222428 151584 3 444 35601427 45568000 10714 130560 0 292515675 99.859 124667674 11869 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-11 05:47:08] CVMFS is ok
[2025-10-11 05:47:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 05:47:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 05:47:08] Further information can be found at the LHC@home message board.
[2025-10-11 05:47:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 05:47:08] Checking for apptainer binary...
[2025-10-11 05:47:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 05:47:08] Running /usr/bin/apptainer --version
[2025-10-11 05:47:08] apptainer version 1.4.1-1.el9
[2025-10-11 05:47:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 05:47:08] wns0083.triumf.lcg
[2025-10-11 05:47:08] apptainer works
[2025-10-11 05:47:08] Set ATHENA_PROC_NUMBER=12
[2025-10-11 05:47:08] Set ATHENA_CORE_NUMBER=12
[2025-10-11 05:47:09] Starting ATLAS job with PandaID=6838294990
[2025-10-11 05:47:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 05:52:07]  *** The last 200 lines of the pilot log: ***
[2025-10-11 05:52:07] 2025-10-11 12:51:33,885 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 05:52:07] 2025-10-11 12:51:33,885 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 05:52:07] 2025-10-11 12:51:33,885 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 05:52:07] 2025-10-11 12:51:33,885 | WARNING  | wrong length of table data, x=[1760186932.0], y=[1052.0] (must be same and length>=4)
[2025-10-11 05:52:07] 2025-10-11 12:51:33,886 | INFO     | could have reported an average CPU frequency of 2554 MHz (4 samples)
[2025-10-11 05:52:07] 2025-10-11 12:51:33,886 | INFO     | ..............................
[2025-10-11 05:52:07] 2025-10-11 12:51:33,887 | INFO     | . Timing measurements:
[2025-10-11 05:52:07] 2025-10-11 12:51:33,887 | INFO     | . get job = 0 s
[2025-10-11 05:52:07] 2025-10-11 12:51:33,887 | INFO     | . initial setup = 3 s
[2025-10-11 05:52:07] 2025-10-11 12:51:33,887 | INFO     | . payload setup = 20 s
[2025-10-11 05:52:07] 2025-10-11 12:51:33,887 | INFO     | . stage-in = 0 s
[2025-10-11 05:52:07] 2025-10-11 12:51:33,887 | INFO     | . payload execution = 40 s
[2025-10-11 05:52:07] 2025-10-11 12:51:33,887 | INFO     | . stage-out = 0 s
[2025-10-11 05:52:07] 2025-10-11 12:51:33,887 | INFO     | . log creation = 0 s
[2025-10-11 05:52:07] 2025-10-11 12:51:33,887 | INFO     | ..............................
[2025-10-11 05:52:07] 2025-10-11 12:51:33,887 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 05:52:07] 2025-10-11 12:51:33,887 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838294990/pilotlog.txt
[2025-10-11 05:52:07] 2025-10-11 12:51:33,917 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-11 05:52:07] - Log from pilotlog.txt -
[2025-10-11 05:52:07] 2025-10-11 12:51:33,879 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6838294990/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 05:52:07] 2025-10-11 12:51:33,884 | INFO     | extracted standard info from prmon json
[2025-10-11 05:52:07] 2025-10-11 12:51:33,884 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 05:52:07] 2025-10-11 12:51:33,885 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 05:52:07] 2025-10-11 12:51:33,885 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 05:52:07] 2025-10-11 12:51:33,885 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 05:52:07] 2025-10-11 12:51:33,885 | WARNING  | wrong length of table data, x=[1760186932.0], y=[1052.0] (must be same and length>=4)
[2025-10-11 05:52:07] 2025-10-11 12:51:33,886 | INFO     | could have reported an average CPU frequency of 2554 MHz (4 samples)
[2025-10-11 05:52:07] 2025-10-11 12:51:33,886 | INFO     | ..............................
[2025-10-11 05:52:07] 2025-10-11 12:51:33,887 | INFO     | . Timing measurements:
[2025-10-11 05:52:07] 2025-10-11 12:51:33,887 | INFO     | . get job = 0 s
[2025-10-11 05:52:07] 2025-10-11 12:51:33,887 | INFO     | . initial setup = 3 s
[2025-10-11 05:52:07] 2025-10-11 12:51:33,887 | INFO     | . payload setup = 20 s
[2025-10-11 05:52:07] 2025-10-11 12:51:33,887 | INFO     | . stage-in = 0 s
[2025-10-11 05:52:07] 2025-10-11 12:51:33,887 | INFO     | . payload execution = 40 s
[2025-10-11 05:52:07] 2025-10-11 12:51:33,887 | INFO     | . stage-out = 0 s
[2025-10-11 05:52:07] 2025-10-11 12:51:33,887 | INFO     | . log creation = 0 s
[2025-10-11 05:52:07] 2025-10-11 12:51:33,887 | INFO     | ..............................
[2025-10-11 05:52:07] 2025-10-11 12:51:33,887 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 05:52:07] 2025-10-11 12:51:33,887 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838294990/pilotlog.txt
[2025-10-11 05:52:07] 2025-10-11 12:51:33,918 | WARNING  | 
[2025-10-11 05:52:07] [begin log extracts]
[2025-10-11 05:52:07] - Log from pilotlog.txt -
[2025-10-11 05:52:07] 2025-10-11 12:51:33,879 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6838294990/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 05:52:07] 2025-10-11 12:51:33,884 | INFO     | extracted standard info from prmon json
[2025-10-11 05:52:07] 2025-10-11 12:51:33,884 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 05:52:07] 2025-10-11 12:51:33,885 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 05:52:07] 2025-10-11 12:51:33,885 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 05:52:07] 2025-10-11 12:51:33,885 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 05:52:07] 2025-10-11 12:51:33,885 | WARNING  | wrong length of table data, x=[1760186932.0], y=[1052.0] (must be same and length>=4)
[2025-10-11 05:52:07] 2025-10-11 12:51:33,886 | INFO     | could have reported an average CPU frequency of 2554 MHz (4 samples)
[2025-10-11 05:52:07] 2025-10-11 12:51:33,886 | INFO     | ..............................
[2025-10-11 05:52:07] 2025-10-11 12:51:33,887 | INFO     | . Timing measurements:
[2025-10-11 05:52:07] 2025-10-11 12:51:33,887 | INFO     | . get job = 0 s
[2025-10-11 05:52:07] 2025-10-11 12:51:33,887 | INFO     | . initial setup = 3 s
[2025-10-11 05:52:07] 2025-10-11 12:51:33,887 | INFO     | . payload setup = 20 s
[2025-10-11 05:52:07] 2025-10-11 12:51:33,887 | INFO     | . stage-in = 0 s
[2025-10-11 05:52:07] 2025-10-11 12:51:33,887 | INFO     | . payload execution = 40 s
[2025-10-11 05:52:07] 2025-10-11 12:51:33,887 | INFO     | . stage-out = 0 s
[2025-10-11 05:52:07] 2025-10-11 12:51:33,887 | INFO     | . log creation = 0 s
[2025-10-11 05:52:07] 2025-10-11 12:51:33,887 | INFO     | ..............................
[2025-10-11 05:52:07] 2025-10-11 12:51:33,887 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 05:52:07] 2025-10-11 12:51:33,887 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838294990/pilotlog.txt
[2025-10-11 05:52:07] [end log extracts]
[2025-10-11 05:52:07] 2025-10-11 12:51:33,928 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-11 05:52:07] 2025-10-11 12:51:33,950 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-11 05:52:07] 2025-10-11 12:51:34,056 | INFO     | 
[2025-10-11 05:52:07] 2025-10-11 12:51:34,056 | INFO     | job summary report
[2025-10-11 05:52:07] 2025-10-11 12:51:34,056 | INFO     | --------------------------------------------------
[2025-10-11 05:52:07] 2025-10-11 12:51:34,056 | INFO     | PanDA job id: 6838294990
[2025-10-11 05:52:07] 2025-10-11 12:51:34,056 | INFO     | task id: 46676269
[2025-10-11 05:52:07] 2025-10-11 12:51:34,056 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-11 05:49:11,506 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-11 05:52:07] 2025-10-11 12:51:34,056 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 05:52:07] 2025-10-11 12:51:34,056 | INFO     | pilot state: failed 
[2025-10-11 05:52:07] 2025-10-11 12:51:34,056 | INFO     | transexitcode: 65
[2025-10-11 05:52:07] 2025-10-11 12:51:34,056 | INFO     | exeerrorcode: 65
[2025-10-11 05:52:07] 2025-10-11 12:51:34,056 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 05:52:07] 2025-10-11 12:51:34,056 | INFO     | exitcode: 65
[2025-10-11 05:52:07] 2025-10-11 12:51:34,056 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 05:52:07] 2025-10-11 12:51:34,056 | INFO     | cpuconsumptiontime: 19 s
[2025-10-11 05:52:07] 2025-10-11 12:51:34,056 | INFO     | nevents: 0
[2025-10-11 05:52:07] 2025-10-11 12:51:34,056 | INFO     | neventsw: 0
[2025-10-11 05:52:07] 2025-10-11 12:51:34,056 | INFO     | pid: 3871559
[2025-10-11 05:52:07] 2025-10-11 12:51:34,057 | INFO     | pgrp: 3871559
[2025-10-11 05:52:07] 2025-10-11 12:51:34,057 | INFO     | corecount: 12
[2025-10-11 05:52:07] 2025-10-11 12:51:34,057 | INFO     | event service: False
[2025-10-11 05:52:07] 2025-10-11 12:51:34,057 | INFO     | sizes: {0: 2348632, 1: 2348831, 12: 2348831, 16: 2349121, 23: 2349149, 65: 2372627, 66: 2376919, 67: 2376947, 199: 2377113}
[2025-10-11 05:52:07] 2025-10-11 12:51:34,057 | INFO     | --------------------------------------------------
[2025-10-11 05:52:07] 2025-10-11 12:51:34,057 | INFO     | 
[2025-10-11 05:52:07] 2025-10-11 12:51:34,057 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-11 05:52:07] 2025-10-11 12:51:34,085 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 05:52:07] 2025-10-11 12:51:34,085 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 05:52:07] 2025-10-11 12:51:34,085 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 05:52:07] 2025-10-11 12:51:34,085 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 05:52:07] 2025-10-11 12:51:34,085 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 05:52:07] 2025-10-11 12:51:34,085 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 05:52:07] 2025-10-11 12:51:34,085 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 05:52:07] 2025-10-11 12:51:34,085 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 05:52:07] 2025-10-11 12:51:34,085 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 05:52:07] 2025-10-11 12:51:34,085 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 05:52:07] 2025-10-11 12:51:34,085 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 05:52:07] 2025-10-11 12:51:34,085 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 05:52:07] 2025-10-11 12:51:34,085 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 05:52:07] 2025-10-11 12:51:34,086 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 05:52:07] 2025-10-11 12:51:34,086 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 05:52:07] 2025-10-11 12:51:34,086 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 05:52:07] 2025-10-11 12:51:34,086 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 05:52:07] 2025-10-11 12:51:34,086 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 05:52:07] 2025-10-11 12:51:34,086 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 05:52:07] 2025-10-11 12:51:34,086 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 05:52:07] 2025-10-11 12:51:34,086 | INFO     | job 6838294990 has completed (purged errors)
[2025-10-11 05:52:07] 2025-10-11 12:51:34,086 | INFO     | overall cleanup function is called
[2025-10-11 05:52:07] 2025-10-11 12:51:35,095 | INFO     | --- collectZombieJob: --- 10, [3871559]
[2025-10-11 05:52:07] 2025-10-11 12:51:35,095 | INFO     | zombie collector waiting for pid 3871559
[2025-10-11 05:52:07] 2025-10-11 12:51:35,095 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 05:52:07] 2025-10-11 12:51:35,096 | INFO     | collected zombie processes
[2025-10-11 05:52:07] 2025-10-11 12:51:35,096 | INFO     | will attempt to kill all subprocesses of pid=3871559
[2025-10-11 05:52:07] 2025-10-11 12:51:35,494 | INFO     | process IDs to be killed: [3871559] (in reverse order)
[2025-10-11 05:52:07] 2025-10-11 12:51:35,574 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 05:52:07] 2025-10-11 12:51:35,575 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 05:52:07] 2025-10-11 12:51:35,584 | INFO     | did not find any defunct processes belonging to 3871559
[2025-10-11 05:52:07] 2025-10-11 12:51:35,592 | INFO     | did not find any defunct processes belonging to 3871559
[2025-10-11 05:52:07] 2025-10-11 12:51:35,593 | INFO     | ready for new job
[2025-10-11 05:52:07] 2025-10-11 12:51:35,593 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 05:52:07] 2025-10-11 12:51:35,594 | INFO     | ***************************************
[2025-10-11 05:52:07] 2025-10-11 12:51:35,594 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 05:52:07] 2025-10-11 12:51:35,594 | INFO     | ***************************************
[2025-10-11 05:52:07] 2025-10-11 12:51:35,594 | INFO     | 
[2025-10-11 05:52:07] 2025-10-11 12:51:35,597 | INFO     | architecture information:
[2025-10-11 05:52:07] 2025-10-11 12:51:35,598 | INFO     | executing command: cat /etc/os-release
[2025-10-11 05:52:07] 2025-10-11 12:51:35,626 | INFO     | cat /etc/os-release:
[2025-10-11 05:52:07] NAME="CentOS Linux"
[2025-10-11 05:52:07] VERSION="7 (Core)"
[2025-10-11 05:52:07] ID="centos"
[2025-10-11 05:52:07] ID_LIKE="rhel fedora"
[2025-10-11 05:52:07] VERSION_ID="7"
[2025-10-11 05:52:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 05:52:07] ANSI_COLOR="0;31"
[2025-10-11 05:52:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 05:52:07] HOME_URL="https://www.centos.org/"
[2025-10-11 05:52:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 05:52:07] 
[2025-10-11 05:52:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 05:52:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 05:52:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 05:52:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 05:52:07] 
[2025-10-11 05:52:07] 2025-10-11 12:51:35,627 | INFO     | ***************************************
[2025-10-11 05:52:07] 2025-10-11 12:51:36,131 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-11 05:52:07] 2025-10-11 12:51:36,157 | INFO     | sufficient remaining disk space (2088335572992 B)
[2025-10-11 05:52:07] 2025-10-11 12:51:36,157 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 05:52:07] 2025-10-11 12:51:36,158 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 05:52:07] 2025-10-11 12:51:36,158 | INFO     | update_server=False
[2025-10-11 05:52:07] 2025-10-11 12:51:36,158 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 05:52:07] 2025-10-11 12:51:36,442 | INFO     | all data control threads have been joined
[2025-10-11 05:52:07] 2025-10-11 12:51:36,471 | INFO     | [monitor] cgroup control has ended
[2025-10-11 05:52:07] 2025-10-11 12:51:36,882 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 05:52:07] 2025-10-11 12:51:37,023 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 05:52:07] 2025-10-11 12:51:37,023 | INFO     | aborting loop
[2025-10-11 05:52:07] 2025-10-11 12:51:37,073 | INFO     | all job control threads have been joined
[2025-10-11 05:52:07] 2025-10-11 12:51:37,163 | INFO     | [job] retrieve thread has finished
[2025-10-11 05:52:07] 2025-10-11 12:51:37,225 | INFO     | [data] copytool_in thread has finished
[2025-10-11 05:52:07] 2025-10-11 12:51:37,280 | INFO     | [payload] failed_post thread has finished
[2025-10-11 05:52:07] 2025-10-11 12:51:37,448 | INFO     | [data] control thread has finished
[2025-10-11 05:52:07] 2025-10-11 12:51:37,560 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 05:52:07] 2025-10-11 12:51:37,596 | INFO     | all payload control threads have been joined
[2025-10-11 05:52:07] 2025-10-11 12:51:37,676 | INFO     | [job] validate thread has finished
[2025-10-11 05:52:07] 2025-10-11 12:51:37,765 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 05:52:07] 2025-10-11 12:51:38,033 | INFO     | [job] job monitor thread has finished
[2025-10-11 05:52:07] 2025-10-11 12:51:38,079 | INFO     | [job] control thread has finished
[2025-10-11 05:52:07] 2025-10-11 12:51:38,128 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 05:52:07] 2025-10-11 12:51:38,410 | INFO     | [payload] validate_post thread has finished
[2025-10-11 05:52:07] 2025-10-11 12:51:38,456 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 05:52:07] 2025-10-11 12:51:38,602 | INFO     | [payload] control thread has finished
[2025-10-11 05:52:07] 2025-10-11 12:51:38,890 | INFO     | [data] copytool_out thread has finished
[2025-10-11 05:52:07] 2025-10-11 12:51:39,072 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 05:52:07] 2025-10-11 12:51:39,250 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 05:52:07] 2025-10-11 12:51:40,078 | INFO     | [job] queue monitor thread has finished
[2025-10-11 05:52:07] 2025-10-11 12:51:43,259 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 05:52:07] 2025-10-11 12:51:43,920 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139949397534528)>', '<ExcThread(monitor, started 139948992739072)>']
[2025-10-11 05:52:07] 2025-10-11 12:51:48,946 | INFO     | all workflow threads have been joined
[2025-10-11 05:52:07] 2025-10-11 12:51:48,946 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 05:52:07] 2025-10-11 12:51:48,947 | INFO     | traces error code: 0
[2025-10-11 05:52:07] 2025-10-11 12:51:48,947 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 05:52:07] 2025-10-11 12:52:07,274 | INFO     | PID=3863811 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 05:52:07] 2025-10-11 12:52:07,274 | INFO     | .. there are 28 such processes running
[2025-10-11 05:52:07] 2025-10-11 12:52:07,275 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 05:52:07] 2025-10-11 12:52:07,275 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 05:52:07] 2025-10-11 12:52:07,275 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 05:52:07] 2025-10-11 12:52:07,275 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 05:52:07] 2025-10-11 12:52:07,275 | INFO     | [monitor] control thread has ended
[2025-10-11 05:52:07] 2025-10-11 12:52:07,393 [wrapper] ==== pilot stdout END ====
[2025-10-11 05:52:07] 2025-10-11 12:52:07,395 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 05:52:07] 2025-10-11 12:52:07,397 [wrapper] pilotpid: 3863811
[2025-10-11 05:52:07] 2025-10-11 12:52:07,398 [wrapper] Pilot exit status: 0
[2025-10-11 05:52:07] 2025-10-11 12:52:07,440 [wrapper] pandaids: 6838294990
[2025-10-11 05:52:07] 2025-10-11 12:52:07,487 [wrapper] cleanup supervisor_pilot 3863817 3863812
[2025-10-11 05:52:07] 2025-10-11 12:52:07,489 [wrapper] Test setup, not cleaning
[2025-10-11 05:52:07] 2025-10-11 12:52:07,491 [wrapper] apfmon messages muted
[2025-10-11 05:52:07] 2025-10-11 12:52:07,493 [wrapper] ==== wrapper stdout END ====
[2025-10-11 05:52:07] 2025-10-11 12:52:07,496 [wrapper] ==== wrapper stderr END ====
[2025-10-11 05:52:07]  *** Error codes and diagnostics ***
[2025-10-11 05:52:07]     "exeErrorCode": 65,
[2025-10-11 05:52:07]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 05:52:07]     "pilotErrorCode": 1305,
[2025-10-11 05:52:07]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 05:52:07]  *** Listing of results directory ***
[2025-10-11 05:52:07] total 217860
[2025-10-11 05:52:07] -rw-r--r--. 1 boinc boinc    557409 Oct 11 03:07 pilot3.tar.gz
[2025-10-11 05:52:07] -rw-r--r--. 1 boinc boinc      5112 Oct 11 03:10 queuedata.json
[2025-10-11 05:52:07] -rwx------. 1 boinc boinc     36292 Oct 11 03:12 runpilot2-wrapper.sh
[2025-10-11 05:52:07] -rw-r--r--. 1 boinc boinc       100 Oct 11 05:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 05:52:07] -rwxr-xr-x. 1 boinc boinc      7986 Oct 11 05:47 run_atlas
[2025-10-11 05:52:07] -rw-r--r--. 1 boinc boinc       105 Oct 11 05:47 job.xml
[2025-10-11 05:52:07] -rw-r--r--. 2 boinc boinc    569682 Oct 11 05:47 input.tar.gz
[2025-10-11 05:52:07] -rw-r--r--. 1 boinc boinc      6594 Oct 11 05:47 init_data.xml
[2025-10-11 05:52:07] -rw-r--r--. 2 boinc boinc 218962134 Oct 11 05:47 EVNT.46676267._002240.pool.root.1
[2025-10-11 05:52:07] -rw-r--r--. 2 boinc boinc     15120 Oct 11 05:47 start_atlas.sh
[2025-10-11 05:52:07] drwxrwx--x. 2 boinc boinc      4096 Oct 11 05:47 shared
[2025-10-11 05:52:07] -rw-r--r--. 1 boinc boinc         0 Oct 11 05:47 boinc_lockfile
[2025-10-11 05:52:07] -rw-r--r--. 1 boinc boinc      2549 Oct 11 05:47 pandaJob.out
[2025-10-11 05:52:07] -rw-------. 1 boinc boinc    975504 Oct 11 05:47 agis_schedconf.cvmfs.json
[2025-10-11 05:52:07] -rw-------. 1 boinc boinc   1560580 Oct 11 05:47 agis_ddmendpoints.agis.ALL.json
[2025-10-11 05:52:07] drwx------. 5 boinc boinc      4096 Oct 11 05:47 pilot3
[2025-10-11 05:52:07] -rw-r--r--. 1 boinc boinc       524 Oct 11 05:49 boinc_task_state.xml
[2025-10-11 05:52:07] -rw-------. 1 boinc boinc       962 Oct 11 05:49 memory_monitor_summary.json
[2025-10-11 05:52:07] -rw-------. 1 boinc boinc     22591 Oct 11 05:49 log.46676269._055784.job.log.tgz.1
[2025-10-11 05:52:07] -rw-------. 1 boinc boinc      8400 Oct 11 05:51 heartbeat.json
[2025-10-11 05:52:07] -rw-r--r--. 1 boinc boinc        22 Oct 11 05:52 wrapper_checkpoint.txt
[2025-10-11 05:52:07] -rw-------. 1 boinc boinc        95 Oct 11 05:52 pilot_heartbeat.json
[2025-10-11 05:52:07] -rw-------. 1 boinc boinc       823 Oct 11 05:52 pilotlog.txt
[2025-10-11 05:52:07] -rw-------. 1 boinc boinc     91903 Oct 11 05:52 log.46676269._055784.job.log.1
[2025-10-11 05:52:07] -rw-------. 1 boinc boinc       188 Oct 11 05:52 output.list
[2025-10-11 05:52:07] -rw-r--r--. 1 boinc boinc       620 Oct 11 05:52 runtime_log
[2025-10-11 05:52:07] -rw-------. 1 boinc boinc    133120 Oct 11 05:52 result.tar.gz
[2025-10-11 05:52:07] -rw-r--r--. 1 boinc boinc      8192 Oct 11 05:52 boinc_mmap_file
[2025-10-11 05:52:07] -rw-------. 1 boinc boinc       643 Oct 11 05:52 XX7NDm9klR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfAgNDmqoZgLm.diag
[2025-10-11 05:52:07] -rw-r--r--. 1 boinc boinc      8528 Oct 11 05:52 runtime_log.err
[2025-10-11 05:52:07] -rw-r--r--. 1 boinc boinc     21804 Oct 11 05:52 stderr.txt
[2025-10-11 05:52:07] No HITS result produced
[2025-10-11 05:52:07]  *** Contents of shared directory: ***
[2025-10-11 05:52:07] total 214540
[2025-10-11 05:52:07] -rw-r--r--. 2 boinc boinc    569682 Oct 11 05:47 input.tar.gz
[2025-10-11 05:52:07] -rw-r--r--. 2 boinc boinc 218962134 Oct 11 05:47 ATLAS.root_0
[2025-10-11 05:52:07] -rw-r--r--. 2 boinc boinc     15120 Oct 11 05:47 start_atlas.sh
[2025-10-11 05:52:07] -rw-------. 1 boinc boinc    133120 Oct 11 05:52 result.tar.gz
05:52:09 (3859715): run_atlas exited; CPU time 27.179841
05:52:09 (3859715): called boinc_finish(0)

</stderr_txt>
]]>

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