Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:41:08 (4137703): wrapper (7.7.26015): starting
05:41:08 (4137703): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 05:41:08] Arguments: --nthreads 12
[2025-10-11 05:41:08] Threads: 12
[2025-10-11 05:41:08] Checking for CVMFS
[2025-10-11 05:41:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 05:41:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 05:41:08] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 05:41:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 05:41:08] 2.11.5.0 2077 30034 209928 151584 1 243 31283697 45568000 18838 130560 0 290478648 99.863 123996791 22865 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-11 05:41:08] CVMFS is ok
[2025-10-11 05:41:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 05:41:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 05:41:09] Further information can be found at the LHC@home message board.
[2025-10-11 05:41:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 05:41:09] Checking for apptainer binary...
[2025-10-11 05:41:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 05:41:09] Running /usr/bin/apptainer --version
[2025-10-11 05:41:09] apptainer version 1.4.1-1.el9
[2025-10-11 05:41:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 05:41:09] wns0079.triumf.lcg
[2025-10-11 05:41:09] apptainer works
[2025-10-11 05:41:09] Set ATHENA_PROC_NUMBER=12
[2025-10-11 05:41:09] Set ATHENA_CORE_NUMBER=12
[2025-10-11 05:41:09] Starting ATLAS job with PandaID=6838363361
[2025-10-11 05:41:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 05:46:54]  *** The last 200 lines of the pilot log: ***
[2025-10-11 05:46:54] 2025-10-11 12:46:12,514 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 05:46:54] 2025-10-11 12:46:12,514 | WARNING  | wrong length of table data, x=[1760186599.0], y=[7643.0] (must be same and length>=4)
[2025-10-11 05:46:54] 2025-10-11 12:46:12,514 | INFO     | could have reported an average CPU frequency of 2553 MHz (4 samples)
[2025-10-11 05:46:54] 2025-10-11 12:46:12,514 | INFO     | ..............................
[2025-10-11 05:46:54] 2025-10-11 12:46:12,514 | INFO     | . Timing measurements:
[2025-10-11 05:46:54] 2025-10-11 12:46:12,514 | INFO     | . get job = 0 s
[2025-10-11 05:46:54] 2025-10-11 12:46:12,514 | INFO     | . initial setup = 4 s
[2025-10-11 05:46:54] 2025-10-11 12:46:12,514 | INFO     | . payload setup = 20 s
[2025-10-11 05:46:54] 2025-10-11 12:46:12,514 | INFO     | . stage-in = 0 s
[2025-10-11 05:46:54] 2025-10-11 12:46:12,515 | INFO     | . payload execution = 56 s
[2025-10-11 05:46:54] 2025-10-11 12:46:12,515 | INFO     | . stage-out = 0 s
[2025-10-11 05:46:54] 2025-10-11 12:46:12,515 | INFO     | . log creation = 0 s
[2025-10-11 05:46:54] 2025-10-11 12:46:12,515 | INFO     | ..............................
[2025-10-11 05:46:54] 2025-10-11 12:46:12,567 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 05:46:54] 2025-10-11 12:46:12,567 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838363361/pilotlog.txt
[2025-10-11 05:46:54] 2025-10-11 12:46:12,654 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-11 05:46:54] - Log from pilotlog.txt -
[2025-10-11 05:46:54] 2025-10-11 12:46:12,513 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6838363361/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 05:46:54] 2025-10-11 12:46:12,513 | INFO     | extracted standard info from prmon json
[2025-10-11 05:46:54] 2025-10-11 12:46:12,513 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 05:46:54] 2025-10-11 12:46:12,513 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 05:46:54] 2025-10-11 12:46:12,514 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 05:46:54] 2025-10-11 12:46:12,514 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 05:46:54] 2025-10-11 12:46:12,514 | WARNING  | wrong length of table data, x=[1760186599.0], y=[7643.0] (must be same and length>=4)
[2025-10-11 05:46:54] 2025-10-11 12:46:12,514 | INFO     | could have reported an average CPU frequency of 2553 MHz (4 samples)
[2025-10-11 05:46:54] 2025-10-11 12:46:12,514 | INFO     | ..............................
[2025-10-11 05:46:54] 2025-10-11 12:46:12,514 | INFO     | . Timing measurements:
[2025-10-11 05:46:54] 2025-10-11 12:46:12,514 | INFO     | . get job = 0 s
[2025-10-11 05:46:54] 2025-10-11 12:46:12,514 | INFO     | . initial setup = 4 s
[2025-10-11 05:46:54] 2025-10-11 12:46:12,514 | INFO     | . payload setup = 20 s
[2025-10-11 05:46:54] 2025-10-11 12:46:12,514 | INFO     | . stage-in = 0 s
[2025-10-11 05:46:54] 2025-10-11 12:46:12,515 | INFO     | . payload execution = 56 s
[2025-10-11 05:46:54] 2025-10-11 12:46:12,515 | INFO     | . stage-out = 0 s
[2025-10-11 05:46:54] 2025-10-11 12:46:12,515 | INFO     | . log creation = 0 s
[2025-10-11 05:46:54] 2025-10-11 12:46:12,515 | INFO     | ..............................
[2025-10-11 05:46:54] 2025-10-11 12:46:12,567 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 05:46:54] 2025-10-11 12:46:12,567 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838363361/pilotlog.txt
[2025-10-11 05:46:54] 2025-10-11 12:46:12,656 | WARNING  | 
[2025-10-11 05:46:54] [begin log extracts]
[2025-10-11 05:46:54] - Log from pilotlog.txt -
[2025-10-11 05:46:54] 2025-10-11 12:46:12,513 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6838363361/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 05:46:54] 2025-10-11 12:46:12,513 | INFO     | extracted standard info from prmon json
[2025-10-11 05:46:54] 2025-10-11 12:46:12,513 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 05:46:54] 2025-10-11 12:46:12,513 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 05:46:54] 2025-10-11 12:46:12,514 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 05:46:54] 2025-10-11 12:46:12,514 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 05:46:54] 2025-10-11 12:46:12,514 | WARNING  | wrong length of table data, x=[1760186599.0], y=[7643.0] (must be same and length>=4)
[2025-10-11 05:46:54] 2025-10-11 12:46:12,514 | INFO     | could have reported an average CPU frequency of 2553 MHz (4 samples)
[2025-10-11 05:46:54] 2025-10-11 12:46:12,514 | INFO     | ..............................
[2025-10-11 05:46:54] 2025-10-11 12:46:12,514 | INFO     | . Timing measurements:
[2025-10-11 05:46:54] 2025-10-11 12:46:12,514 | INFO     | . get job = 0 s
[2025-10-11 05:46:54] 2025-10-11 12:46:12,514 | INFO     | . initial setup = 4 s
[2025-10-11 05:46:54] 2025-10-11 12:46:12,514 | INFO     | . payload setup = 20 s
[2025-10-11 05:46:54] 2025-10-11 12:46:12,514 | INFO     | . stage-in = 0 s
[2025-10-11 05:46:54] 2025-10-11 12:46:12,515 | INFO     | . payload execution = 56 s
[2025-10-11 05:46:54] 2025-10-11 12:46:12,515 | INFO     | . stage-out = 0 s
[2025-10-11 05:46:54] 2025-10-11 12:46:12,515 | INFO     | . log creation = 0 s
[2025-10-11 05:46:54] 2025-10-11 12:46:12,515 | INFO     | ..............................
[2025-10-11 05:46:54] 2025-10-11 12:46:12,567 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 05:46:54] 2025-10-11 12:46:12,567 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838363361/pilotlog.txt
[2025-10-11 05:46:54] [end log extracts]
[2025-10-11 05:46:54] 2025-10-11 12:46:12,656 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-11 05:46:54] 2025-10-11 12:46:12,656 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-11 05:46:54] 2025-10-11 12:46:12,903 | INFO     | 
[2025-10-11 05:46:54] 2025-10-11 12:46:12,903 | INFO     | job summary report
[2025-10-11 05:46:54] 2025-10-11 12:46:12,903 | INFO     | --------------------------------------------------
[2025-10-11 05:46:54] 2025-10-11 12:46:12,903 | INFO     | PanDA job id: 6838363361
[2025-10-11 05:46:54] 2025-10-11 12:46:12,903 | INFO     | task id: 46676269
[2025-10-11 05:46:54] 2025-10-11 12:46:12,903 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-11 05:43:36,121 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-11 05:46:54] 2025-10-11 12:46:12,903 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 05:46:54] 2025-10-11 12:46:12,903 | INFO     | pilot state: failed 
[2025-10-11 05:46:54] 2025-10-11 12:46:12,903 | INFO     | transexitcode: 65
[2025-10-11 05:46:54] 2025-10-11 12:46:12,903 | INFO     | exeerrorcode: 65
[2025-10-11 05:46:54] 2025-10-11 12:46:12,903 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 05:46:54] 2025-10-11 12:46:12,903 | INFO     | exitcode: 65
[2025-10-11 05:46:54] 2025-10-11 12:46:12,903 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 05:46:54] 2025-10-11 12:46:12,903 | INFO     | cpuconsumptiontime: 18 s
[2025-10-11 05:46:54] 2025-10-11 12:46:12,903 | INFO     | nevents: 0
[2025-10-11 05:46:54] 2025-10-11 12:46:12,904 | INFO     | neventsw: 0
[2025-10-11 05:46:54] 2025-10-11 12:46:12,904 | INFO     | pid: 4148172
[2025-10-11 05:46:54] 2025-10-11 12:46:12,904 | INFO     | pgrp: 4148172
[2025-10-11 05:46:54] 2025-10-11 12:46:12,904 | INFO     | corecount: 12
[2025-10-11 05:46:54] 2025-10-11 12:46:12,904 | INFO     | event service: False
[2025-10-11 05:46:54] 2025-10-11 12:46:12,904 | INFO     | sizes: {0: 2348575, 1: 2348830, 12: 2348830, 15: 2349120, 23: 2349148, 81: 2372481, 83: 2376829, 228: 2376967}
[2025-10-11 05:46:54] 2025-10-11 12:46:12,904 | INFO     | --------------------------------------------------
[2025-10-11 05:46:54] 2025-10-11 12:46:12,904 | INFO     | 
[2025-10-11 05:46:54] 2025-10-11 12:46:12,904 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-11 05:46:54] 2025-10-11 12:46:13,041 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 05:46:54] 2025-10-11 12:46:13,041 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 05:46:54] 2025-10-11 12:46:13,041 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 05:46:54] 2025-10-11 12:46:13,042 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 05:46:54] 2025-10-11 12:46:13,042 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 05:46:54] 2025-10-11 12:46:13,042 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 05:46:54] 2025-10-11 12:46:13,042 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 05:46:54] 2025-10-11 12:46:13,042 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 05:46:54] 2025-10-11 12:46:13,042 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 05:46:54] 2025-10-11 12:46:13,042 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 05:46:54] 2025-10-11 12:46:13,042 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 05:46:54] 2025-10-11 12:46:13,042 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 05:46:54] 2025-10-11 12:46:13,042 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 05:46:54] 2025-10-11 12:46:13,042 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 05:46:54] 2025-10-11 12:46:13,042 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 05:46:54] 2025-10-11 12:46:13,042 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 05:46:54] 2025-10-11 12:46:13,042 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 05:46:54] 2025-10-11 12:46:13,042 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 05:46:54] 2025-10-11 12:46:13,042 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 05:46:54] 2025-10-11 12:46:13,042 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 05:46:54] 2025-10-11 12:46:13,042 | INFO     | job 6838363361 has completed (purged errors)
[2025-10-11 05:46:54] 2025-10-11 12:46:13,043 | INFO     | overall cleanup function is called
[2025-10-11 05:46:54] 2025-10-11 12:46:14,049 | INFO     | --- collectZombieJob: --- 10, [4148172]
[2025-10-11 05:46:54] 2025-10-11 12:46:14,049 | INFO     | zombie collector waiting for pid 4148172
[2025-10-11 05:46:54] 2025-10-11 12:46:14,049 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 05:46:54] 2025-10-11 12:46:14,049 | INFO     | collected zombie processes
[2025-10-11 05:46:54] 2025-10-11 12:46:14,049 | INFO     | will attempt to kill all subprocesses of pid=4148172
[2025-10-11 05:46:54] 2025-10-11 12:46:14,478 | INFO     | process IDs to be killed: [4148172] (in reverse order)
[2025-10-11 05:46:54] 2025-10-11 12:46:14,580 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 05:46:54] 2025-10-11 12:46:14,580 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 05:46:54] 2025-10-11 12:46:14,590 | INFO     | did not find any defunct processes belonging to 4148172
[2025-10-11 05:46:54] 2025-10-11 12:46:14,603 | INFO     | did not find any defunct processes belonging to 4148172
[2025-10-11 05:46:54] 2025-10-11 12:46:14,603 | INFO     | ready for new job
[2025-10-11 05:46:54] 2025-10-11 12:46:14,603 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 05:46:54] 2025-10-11 12:46:14,605 | INFO     | ***************************************
[2025-10-11 05:46:54] 2025-10-11 12:46:14,605 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 05:46:54] 2025-10-11 12:46:14,605 | INFO     | ***************************************
[2025-10-11 05:46:54] 2025-10-11 12:46:14,605 | INFO     | 
[2025-10-11 05:46:54] 2025-10-11 12:46:14,607 | INFO     | architecture information:
[2025-10-11 05:46:54] 2025-10-11 12:46:14,607 | INFO     | executing command: cat /etc/os-release
[2025-10-11 05:46:54] 2025-10-11 12:46:14,624 | INFO     | cat /etc/os-release:
[2025-10-11 05:46:54] NAME="CentOS Linux"
[2025-10-11 05:46:54] VERSION="7 (Core)"
[2025-10-11 05:46:54] ID="centos"
[2025-10-11 05:46:54] ID_LIKE="rhel fedora"
[2025-10-11 05:46:54] VERSION_ID="7"
[2025-10-11 05:46:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 05:46:54] ANSI_COLOR="0;31"
[2025-10-11 05:46:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 05:46:54] HOME_URL="https://www.centos.org/"
[2025-10-11 05:46:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 05:46:54] 
[2025-10-11 05:46:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 05:46:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 05:46:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 05:46:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 05:46:54] 
[2025-10-11 05:46:54] 2025-10-11 12:46:14,625 | INFO     | ***************************************
[2025-10-11 05:46:54] 2025-10-11 12:46:15,128 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-11 05:46:54] 2025-10-11 12:46:15,199 | INFO     | sufficient remaining disk space (1930769203200 B)
[2025-10-11 05:46:54] 2025-10-11 12:46:15,200 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 05:46:54] 2025-10-11 12:46:15,200 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 05:46:54] 2025-10-11 12:46:15,200 | INFO     | update_server=False
[2025-10-11 05:46:54] 2025-10-11 12:46:15,200 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 05:46:54] 2025-10-11 12:46:15,200 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 05:46:54] 2025-10-11 12:46:15,200 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 05:46:54] 2025-10-11 12:46:15,407 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 05:46:54] 2025-10-11 12:46:15,407 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 05:46:54] 2025-10-11 12:46:15,407 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 05:46:54] 2025-10-11 12:46:15,407 | INFO     | will abort loop
[2025-10-11 05:46:54] 2025-10-11 12:46:15,585 | INFO     | all job control threads have been joined
[2025-10-11 05:46:54] 2025-10-11 12:46:15,874 | INFO     | all payload control threads have been joined
[2025-10-11 05:46:54] 2025-10-11 12:46:15,979 | INFO     | all data control threads have been joined
[2025-10-11 05:46:54] 2025-10-11 12:46:16,210 | INFO     | [job] retrieve thread has finished
[2025-10-11 05:46:54] 2025-10-11 12:46:16,415 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 05:46:54] 2025-10-11 12:46:16,415 | INFO     | [job] job monitor thread has finished
[2025-10-11 05:46:54] 2025-10-11 12:46:16,447 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 05:46:54] 2025-10-11 12:46:16,591 | INFO     | [job] control thread has finished
[2025-10-11 05:46:54] 2025-10-11 12:46:16,647 | INFO     | [data] copytool_in thread has finished
[2025-10-11 05:46:54] 2025-10-11 12:46:16,752 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 05:46:54] 2025-10-11 12:46:16,856 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 05:46:54] 2025-10-11 12:46:16,880 | INFO     | [payload] control thread has finished
[2025-10-11 05:46:54] 2025-10-11 12:46:16,985 | INFO     | [data] control thread has finished
[2025-10-11 05:46:54] 2025-10-11 12:46:17,135 | INFO     | [payload] failed_post thread has finished
[2025-10-11 05:46:54] 2025-10-11 12:46:17,157 | INFO     | [job] validate thread has finished
[2025-10-11 05:46:54] 2025-10-11 12:46:17,210 | INFO     | [data] copytool_out thread has finished
[2025-10-11 05:46:54] 2025-10-11 12:46:17,623 | INFO     | [payload] validate_post thread has finished
[2025-10-11 05:46:54] 2025-10-11 12:46:17,921 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 05:46:54] 2025-10-11 12:46:18,928 | INFO     | [job] queue monitor thread has finished
[2025-10-11 05:46:54] 2025-10-11 12:46:19,212 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 05:46:54] 2025-10-11 12:46:45,436 | INFO     | PID=4141443 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 05:46:54] 2025-10-11 12:46:45,436 | INFO     | .. there are 28 such processes running
[2025-10-11 05:46:54] 2025-10-11 12:46:45,436 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 05:46:54] 2025-10-11 12:46:45,436 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 05:46:54] 2025-10-11 12:46:45,436 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 05:46:54] 2025-10-11 12:46:47,823 | INFO     | [monitor] cgroup control has ended
[2025-10-11 05:46:54] 2025-10-11 12:46:48,538 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139826973476672)>', '<ExcThread(monitor, started 139826166732544)>']
[2025-10-11 05:46:54] 2025-10-11 12:46:49,460 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 05:46:54] 2025-10-11 12:46:49,460 | INFO     | [monitor] control thread has ended
[2025-10-11 05:46:54] 2025-10-11 12:46:53,564 | INFO     | all workflow threads have been joined
[2025-10-11 05:46:54] 2025-10-11 12:46:53,565 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 05:46:54] 2025-10-11 12:46:53,565 | INFO     | traces error code: 0
[2025-10-11 05:46:54] 2025-10-11 12:46:53,566 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 05:46:54] 2025-10-11 12:46:53,869 [wrapper] ==== pilot stdout END ====
[2025-10-11 05:46:54] 2025-10-11 12:46:53,887 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 05:46:54] 2025-10-11 12:46:53,918 [wrapper] pilotpid: 4141443
[2025-10-11 05:46:54] 2025-10-11 12:46:53,946 [wrapper] Pilot exit status: 0
[2025-10-11 05:46:54] 2025-10-11 12:46:54,032 [wrapper] pandaids: 6838363361
[2025-10-11 05:46:54] 2025-10-11 12:46:54,175 [wrapper] cleanup supervisor_pilot 4141449 4141444
[2025-10-11 05:46:54] 2025-10-11 12:46:54,195 [wrapper] Test setup, not cleaning
[2025-10-11 05:46:54] 2025-10-11 12:46:54,234 [wrapper] apfmon messages muted
[2025-10-11 05:46:54] 2025-10-11 12:46:54,273 [wrapper] ==== wrapper stdout END ====
[2025-10-11 05:46:54] 2025-10-11 12:46:54,291 [wrapper] ==== wrapper stderr END ====
[2025-10-11 05:46:54]  *** Error codes and diagnostics ***
[2025-10-11 05:46:54]     "exeErrorCode": 65,
[2025-10-11 05:46:54]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 05:46:54]     "pilotErrorCode": 1305,
[2025-10-11 05:46:54]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 05:46:54]  *** Listing of results directory ***
[2025-10-11 05:46:54] total 221512
[2025-10-11 05:46:54] -rw-r--r--. 1 boinc boinc    557409 Oct 11 03:07 pilot3.tar.gz
[2025-10-11 05:46:54] -rw-r--r--. 1 boinc boinc      5112 Oct 11 03:10 queuedata.json
[2025-10-11 05:46:54] -rwx------. 1 boinc boinc     36292 Oct 11 03:10 runpilot2-wrapper.sh
[2025-10-11 05:46:54] -rw-r--r--. 1 boinc boinc       100 Oct 11 05:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 05:46:54] -rwxr-xr-x. 1 boinc boinc      7986 Oct 11 05:41 run_atlas
[2025-10-11 05:46:54] -rw-r--r--. 1 boinc boinc       105 Oct 11 05:41 job.xml
[2025-10-11 05:46:54] -rw-r--r--. 1 boinc boinc      6593 Oct 11 05:41 init_data.xml
[2025-10-11 05:46:54] -rw-r--r--. 2 boinc boinc 222697660 Oct 11 05:41 EVNT.46676267._000573.pool.root.1
[2025-10-11 05:46:54] -rw-r--r--. 2 boinc boinc     15120 Oct 11 05:41 start_atlas.sh
[2025-10-11 05:46:54] drwxrwx--x. 2 boinc boinc      4096 Oct 11 05:41 shared
[2025-10-11 05:46:54] -rw-r--r--. 2 boinc boinc    569683 Oct 11 05:41 input.tar.gz
[2025-10-11 05:46:54] -rw-r--r--. 1 boinc boinc         0 Oct 11 05:41 boinc_lockfile
[2025-10-11 05:46:54] -rw-r--r--. 1 boinc boinc      2549 Oct 11 05:41 pandaJob.out
[2025-10-11 05:46:54] -rw-------. 1 boinc boinc    975504 Oct 11 05:41 agis_schedconf.cvmfs.json
[2025-10-11 05:46:54] -rw-------. 1 boinc boinc   1560580 Oct 11 05:41 agis_ddmendpoints.agis.ALL.json
[2025-10-11 05:46:54] drwx------. 5 boinc boinc      4096 Oct 11 05:41 pilot3
[2025-10-11 05:46:54] -rw-------. 1 boinc boinc       963 Oct 11 05:43 memory_monitor_summary.json
[2025-10-11 05:46:54] -rw-------. 1 boinc boinc     22417 Oct 11 05:43 log.46676269._055904.job.log.tgz.1
[2025-10-11 05:46:54] -rw-------. 1 boinc boinc        95 Oct 11 05:45 pilot_heartbeat.json
[2025-10-11 05:46:54] -rw-------. 1 boinc boinc      8398 Oct 11 05:46 heartbeat.json
[2025-10-11 05:46:54] -rw-r--r--. 1 boinc boinc       523 Oct 11 05:46 boinc_task_state.xml
[2025-10-11 05:46:54] -rw-r--r--. 1 boinc boinc      8192 Oct 11 05:46 boinc_mmap_file
[2025-10-11 05:46:54] -rw-r--r--. 1 boinc boinc        22 Oct 11 05:46 wrapper_checkpoint.txt
[2025-10-11 05:46:54] -rw-------. 1 boinc boinc      5009 Oct 11 05:46 pilotlog.txt
[2025-10-11 05:46:54] -rw-------. 1 boinc boinc     94195 Oct 11 05:46 log.46676269._055904.job.log.1
[2025-10-11 05:46:54] -rw-------. 1 boinc boinc       188 Oct 11 05:46 output.list
[2025-10-11 05:46:54] -rw-r--r--. 1 boinc boinc       620 Oct 11 05:46 runtime_log
[2025-10-11 05:46:54] -rw-------. 1 boinc boinc    133120 Oct 11 05:46 result.tar.gz
[2025-10-11 05:46:54] -rw-r--r--. 1 boinc boinc      8528 Oct 11 05:46 runtime_log.err
[2025-10-11 05:46:54] -rw-------. 1 boinc boinc       644 Oct 11 05:46 HZXKDm3jlR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmv9fNDmamVBBn.diag
[2025-10-11 05:46:54] -rw-r--r--. 1 boinc boinc     21820 Oct 11 05:46 stderr.txt
[2025-10-11 05:46:54] No HITS result produced
[2025-10-11 05:46:54]  *** Contents of shared directory: ***
[2025-10-11 05:46:54] total 218188
[2025-10-11 05:46:54] -rw-r--r--. 2 boinc boinc 222697660 Oct 11 05:41 ATLAS.root_0
[2025-10-11 05:46:54] -rw-r--r--. 2 boinc boinc     15120 Oct 11 05:41 start_atlas.sh
[2025-10-11 05:46:54] -rw-r--r--. 2 boinc boinc    569683 Oct 11 05:41 input.tar.gz
[2025-10-11 05:46:54] -rw-------. 1 boinc boinc    133120 Oct 11 05:46 result.tar.gz
05:46:55 (4137703): run_atlas exited; CPU time 29.573193
05:46:55 (4137703): called boinc_finish(0)

</stderr_txt>
]]>

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