Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:32:26 (2872225): wrapper (7.7.26015): starting
20:32:26 (2872225): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 20:32:26] Arguments: --nthreads 12
[2025-10-11 20:32:26] Threads: 12
[2025-10-11 20:32:26] Checking for CVMFS
[2025-10-11 20:32:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 20:32:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 20:32:26] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 20:32:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 20:32:26] 2.13.1.0 1560427 3002 93856 151593 0 57 2914893 4097024 0 130560 0 3614666 99.990 229723 8796 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-10-11 20:32:26] CVMFS is ok
[2025-10-11 20:32:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 20:32:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 20:32:26] Further information can be found at the LHC@home message board.
[2025-10-11 20:32:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 20:32:26] Checking for apptainer binary...
[2025-10-11 20:32:26] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-10-11 20:32:26] apptainer is not installed, using version from CVMFS
[2025-10-11 20:32:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 20:32:27] pckelar5.cern.ch
[2025-10-11 20:32:27] apptainer works
[2025-10-11 20:32:27] Set ATHENA_PROC_NUMBER=12
[2025-10-11 20:32:27] Set ATHENA_CORE_NUMBER=12
[2025-10-11 20:32:27] Starting ATLAS job with PandaID=6838182208
[2025-10-11 20:32:27] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 21:42:46]  *** The last 200 lines of the pilot log: ***
[2025-10-11 21:42:46]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6838182208/log.46676269._053278.job.log.tgz.1
[2025-10-11 21:42:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a4/0e/log.46676269._053278.job.log.tgz.1
[2025-10-11 21:42:46]  workdir=None
[2025-10-11 21:42:46] ]
[2025-10-11 21:42:46] 2025-10-11 19:41:58,653 | INFO     | transferring file log.46676269._053278.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6838182208/log.46676269._053278.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-11 21:42:46] 2025-10-11 19:41:58,653 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6838182208/log.46676269._053278.job.log.tgz.1 /var/lib/boinc/slots/1/log.46676269._053278.job
[2025-10-11 21:42:46] 2025-10-11 19:41:58,668 | INFO     | adding to output.list: log.46676269._053278.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a4/0e/log.46676269._053278.job.log.tg
[2025-10-11 21:42:46] 2025-10-11 19:41:58,669 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 21:42:46] 2025-10-11 19:41:58,669 | INFO     | summary of transferred files:
[2025-10-11 21:42:46] 2025-10-11 19:41:58,669 | INFO     |  -- lfn=log.46676269._053278.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 21:42:46] 2025-10-11 19:41:58,669 | INFO     | stage-out finished correctly
[2025-10-11 21:42:46] 2025-10-11 19:41:59,912 | INFO     | monitor loop #312: job 0:6838182208 is in state 'finished'
[2025-10-11 21:42:46] 2025-10-11 19:41:59,912 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 21:42:46] 2025-10-11 19:41:59,924 | INFO     | time since job start (4165s) is within the limit (172800.0s)
[2025-10-11 21:42:46] 2025-10-11 19:42:01,023 | INFO     | PID=2875992 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 21:42:46] 2025-10-11 19:42:01,775 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 21:42:46] 2025-10-11 19:42:02,023 | INFO     | time since job start (4168s) is within the limit (172800.0s)
[2025-10-11 21:42:46] 2025-10-11 19:42:02,415 | INFO     | monitor loop #313: job 0:6838182208 is in state 'finished'
[2025-10-11 21:42:46] 2025-10-11 19:42:02,415 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 21:42:46] 2025-10-11 19:42:03,174 | INFO     | job 6838182208 has state=finished
[2025-10-11 21:42:46] 2025-10-11 19:42:03,174 | INFO     | preparing for final server update for job 6838182208 in state='finished'
[2025-10-11 21:42:46] 2025-10-11 19:42:03,174 | INFO     | this job has now completed (state=finished)
[2025-10-11 21:42:46] 2025-10-11 19:42:03,174 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 21:42:46] 2025-10-11 19:42:03,174 | INFO     | log transfer has been attempted: DONE
[2025-10-11 21:42:46] 2025-10-11 19:42:03,174 | INFO     | job 6838182208 has finished - writing final server update
[2025-10-11 21:42:46] 2025-10-11 19:42:03,175 | INFO     | total number of processed events: 400 (read)
[2025-10-11 21:42:46] 2025-10-11 19:42:03,178 | INFO     | executing command: lscpu
[2025-10-11 21:42:46] 2025-10-11 19:42:03,202 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 21:42:46] 2025-10-11 19:42:04,029 | INFO     | time since job start (4170s) is within the limit (172800.0s)
[2025-10-11 21:42:46] 2025-10-11 19:42:04,918 | INFO     | monitor loop #314: job 0:6838182208 is in state 'finished'
[2025-10-11 21:42:46] 2025-10-11 19:42:04,918 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 21:42:46] 2025-10-11 19:42:06,034 | INFO     | time since job start (4172s) is within the limit (172800.0s)
[2025-10-11 21:42:46] 2025-10-11 19:42:07,421 | INFO     | monitor loop #315: job 0:6838182208 is in state 'finished'
[2025-10-11 21:42:46] 2025-10-11 19:42:07,421 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 21:42:46] 2025-10-11 19:42:07,916 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-11 21:42:46] 2025-10-11 19:42:07,918 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 2317.4235
[2025-10-11 21:42:46] 2025-10-11 19:42:07,920 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6838182208/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 21:42:46] 2025-10-11 19:42:07,920 | INFO     | extracted standard info from prmon json
[2025-10-11 21:42:46] 2025-10-11 19:42:07,920 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 21:42:46] 2025-10-11 19:42:07,921 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 21:42:46] 2025-10-11 19:42:07,921 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 21:42:46] 2025-10-11 19:42:07,921 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 21:42:46] 2025-10-11 19:42:07,922 | INFO     | fitting pss+swap vs Time
[2025-10-11 21:42:46] 2025-10-11 19:42:07,922 | INFO     | sum of square deviations: 70364110.0
[2025-10-11 21:42:46] 2025-10-11 19:42:07,923 | INFO     | sum of deviations: -10298120710.999996
[2025-10-11 21:42:46] 2025-10-11 19:42:07,923 | INFO     | mean x: 1760209713.0
[2025-10-11 21:42:46] 2025-10-11 19:42:07,923 | INFO     | mean y: 3029418.2459016396
[2025-10-11 21:42:46] 2025-10-11 19:42:07,923 | INFO     | -- intersect: 257618056470.37036
[2025-10-11 21:42:46] 2025-10-11 19:42:07,923 | INFO     | intersect: 257618056470.37036
[2025-10-11 21:42:46] 2025-10-11 19:42:07,923 | INFO     | chi2: 0.10005105947592237
[2025-10-11 21:42:46] 2025-10-11 19:42:07,923 | INFO     | -- intersect: 257618056470.37036
[2025-10-11 21:42:46] 2025-10-11 19:42:07,923 | INFO     | current memory leak: -146.35 B/s (using 61 data points, chi2=0.10)
[2025-10-11 21:42:46] 2025-10-11 19:42:07,924 | INFO     | could have reported an average CPU frequency of 2544 MHz (6 samples)
[2025-10-11 21:42:46] 2025-10-11 19:42:07,924 | INFO     | ..............................
[2025-10-11 21:42:46] 2025-10-11 19:42:07,924 | INFO     | . Timing measurements:
[2025-10-11 21:42:46] 2025-10-11 19:42:07,924 | INFO     | . get job = 0 s
[2025-10-11 21:42:46] 2025-10-11 19:42:07,924 | INFO     | . initial setup = 1 s
[2025-10-11 21:42:46] 2025-10-11 19:42:07,924 | INFO     | . payload setup = 6 s
[2025-10-11 21:42:46] 2025-10-11 19:42:07,924 | INFO     | . stage-in = 0 s
[2025-10-11 21:42:46] 2025-10-11 19:42:07,924 | INFO     | . payload execution = 4139 s
[2025-10-11 21:42:46] 2025-10-11 19:42:07,924 | INFO     | . stage-out = 0 s
[2025-10-11 21:42:46] 2025-10-11 19:42:07,925 | INFO     | . log creation = 0 s
[2025-10-11 21:42:46] 2025-10-11 19:42:07,925 | INFO     | ..............................
[2025-10-11 21:42:46] 2025-10-11 19:42:08,020 | INFO     | 
[2025-10-11 21:42:46] 2025-10-11 19:42:08,020 | INFO     | job summary report
[2025-10-11 21:42:46] 2025-10-11 19:42:08,020 | INFO     | --------------------------------------------------
[2025-10-11 21:42:46] 2025-10-11 19:42:08,020 | INFO     | PanDA job id: 6838182208
[2025-10-11 21:42:46] 2025-10-11 19:42:08,020 | INFO     | task id: 46676269
[2025-10-11 21:42:46] 2025-10-11 19:42:08,020 | INFO     | errors: (none)
[2025-10-11 21:42:46] 2025-10-11 19:42:08,020 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 21:42:46] 2025-10-11 19:42:08,020 | INFO     | pilot state: finished 
[2025-10-11 21:42:46] 2025-10-11 19:42:08,021 | INFO     | transexitcode: 0
[2025-10-11 21:42:46] 2025-10-11 19:42:08,021 | INFO     | exeerrorcode: 0
[2025-10-11 21:42:46] 2025-10-11 19:42:08,021 | INFO     | exeerrordiag: 
[2025-10-11 21:42:46] 2025-10-11 19:42:08,021 | INFO     | exitcode: 0
[2025-10-11 21:42:46] 2025-10-11 19:42:08,021 | INFO     | exitmsg: OK
[2025-10-11 21:42:46] 2025-10-11 19:42:08,021 | INFO     | cpuconsumptiontime: 44843 s
[2025-10-11 21:42:46] 2025-10-11 19:42:08,021 | INFO     | nevents: 400
[2025-10-11 21:42:46] 2025-10-11 19:42:08,021 | INFO     | neventsw: 0
[2025-10-11 21:42:46] 2025-10-11 19:42:08,021 | INFO     | pid: 2883313
[2025-10-11 21:42:46] 2025-10-11 19:42:08,021 | INFO     | pgrp: 2883313
[2025-10-11 21:42:46] 2025-10-11 19:42:08,021 | INFO     | corecount: 12
[2025-10-11 21:42:46] 2025-10-11 19:42:08,021 | INFO     | event service: False
[2025-10-11 21:42:46] 2025-10-11 19:42:08,021 | INFO     | sizes: {0: 2348686, 1: 2348885, 4: 2349147, 11: 2349175, 4149: 2384148, 4153: 2384148, 4159: 2384470}
[2025-10-11 21:42:46] 2025-10-11 19:42:08,022 | INFO     | --------------------------------------------------
[2025-10-11 21:42:46] 2025-10-11 19:42:08,022 | INFO     | 
[2025-10-11 21:42:46] 2025-10-11 19:42:08,022 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-10-11 21:42:46] 2025-10-11 19:42:08,039 | INFO     | time since job start (4174s) is within the limit (172800.0s)
[2025-10-11 21:42:46] 2025-10-11 19:42:08,041 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 21:42:46] 2025-10-11 19:42:08,041 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 21:42:46] 2025-10-11 19:42:08,041 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 21:42:46] 2025-10-11 19:42:08,041 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 21:42:46] 2025-10-11 19:42:08,041 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 21:42:46] 2025-10-11 19:42:08,042 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 21:42:46] 2025-10-11 19:42:08,042 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 21:42:46] 2025-10-11 19:42:08,042 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 21:42:46] 2025-10-11 19:42:08,042 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 21:42:46] 2025-10-11 19:42:08,042 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 21:42:46] 2025-10-11 19:42:08,042 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 21:42:46] 2025-10-11 19:42:08,042 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 21:42:46] 2025-10-11 19:42:08,042 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 21:42:46] 2025-10-11 19:42:08,042 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 21:42:46] 2025-10-11 19:42:08,042 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 21:42:46] 2025-10-11 19:42:08,042 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 21:42:46] 2025-10-11 19:42:08,042 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 21:42:46] 2025-10-11 19:42:08,043 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 21:42:46] 2025-10-11 19:42:08,043 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 21:42:46] 2025-10-11 19:42:08,043 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 21:42:46] 2025-10-11 19:42:08,043 | INFO     | job 6838182208 has completed (purged errors)
[2025-10-11 21:42:46] 2025-10-11 19:42:08,043 | INFO     | overall cleanup function is called
[2025-10-11 21:42:46] 2025-10-11 19:42:09,050 | INFO     | --- collectZombieJob: --- 10, [2883313]
[2025-10-11 21:42:46] 2025-10-11 19:42:09,050 | INFO     | zombie collector waiting for pid 2883313
[2025-10-11 21:42:46] 2025-10-11 19:42:09,050 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 21:42:46] 2025-10-11 19:42:09,050 | INFO     | collected zombie processes
[2025-10-11 21:42:46] 2025-10-11 19:42:09,050 | INFO     | will attempt to kill all subprocesses of pid=2883313
[2025-10-11 21:42:46] 2025-10-11 19:42:09,128 | INFO     | process IDs to be killed: [2883313] (in reverse order)
[2025-10-11 21:42:46] 2025-10-11 19:42:09,166 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 21:42:46] 2025-10-11 19:42:09,166 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 21:42:46] 2025-10-11 19:42:09,168 | INFO     | did not find any defunct processes belonging to 2883313
[2025-10-11 21:42:46] 2025-10-11 19:42:09,170 | INFO     | did not find any defunct processes belonging to 2883313
[2025-10-11 21:42:46] 2025-10-11 19:42:09,171 | INFO     | ready for new job
[2025-10-11 21:42:46] 2025-10-11 19:42:09,171 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 21:42:46] 2025-10-11 19:42:09,172 | INFO     | ***************************************
[2025-10-11 21:42:46] 2025-10-11 19:42:09,172 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 21:42:46] 2025-10-11 19:42:09,172 | INFO     | ***************************************
[2025-10-11 21:42:46] 2025-10-11 19:42:09,172 | INFO     | 
[2025-10-11 21:42:46] 2025-10-11 19:42:09,173 | INFO     | architecture information:
[2025-10-11 21:42:46] 2025-10-11 19:42:09,173 | INFO     | executing command: cat /etc/os-release
[2025-10-11 21:42:46] 2025-10-11 19:42:09,185 | INFO     | cat /etc/os-release:
[2025-10-11 21:42:46] NAME="CentOS Linux"
[2025-10-11 21:42:46] VERSION="7 (Core)"
[2025-10-11 21:42:46] ID="centos"
[2025-10-11 21:42:46] ID_LIKE="rhel fedora"
[2025-10-11 21:42:46] VERSION_ID="7"
[2025-10-11 21:42:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 21:42:46] ANSI_COLOR="0;31"
[2025-10-11 21:42:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 21:42:46] HOME_URL="https://www.centos.org/"
[2025-10-11 21:42:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 21:42:46] 
[2025-10-11 21:42:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 21:42:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 21:42:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 21:42:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 21:42:46] 
[2025-10-11 21:42:46] 2025-10-11 19:42:09,185 | INFO     | ***************************************
[2025-10-11 21:42:46] 2025-10-11 19:42:09,688 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-10-11 21:42:46] 2025-10-11 19:42:09,701 | INFO     | sufficient remaining disk space (1817546063872 B)
[2025-10-11 21:42:46] 2025-10-11 19:42:09,702 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 21:42:46] 2025-10-11 19:42:09,702 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 21:42:46] 2025-10-11 19:42:09,702 | INFO     | update_server=False
[2025-10-11 21:42:46] 2025-10-11 19:42:09,702 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 21:42:46] 2025-10-11 19:42:09,702 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 21:42:46] 2025-10-11 19:42:09,703 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 21:42:46] 2025-10-11 19:42:09,703 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-11 21:42:46] 2025-10-11 19:42:09,703 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 21:42:46] 2025-10-11 19:42:09,703 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 21:42:46] 2025-10-11 19:42:09,703 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 21:42:46] 2025-10-11 19:42:09,760 | INFO     | all data control threads have been joined
[2025-10-11 21:42:46] 2025-10-11 19:42:09,924 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 21:42:46] 2025-10-11 19:42:09,924 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 21:42:46] 2025-10-11 19:42:09,924 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 21:42:46] 2025-10-11 19:42:09,924 | INFO     | will abort loop
[2025-10-11 21:42:46] 2025-10-11 19:42:10,707 | INFO     | [job] retrieve thread has finished
[2025-10-11 21:42:46] 2025-10-11 19:42:10,708 | INFO     | [job] queue monitor thread has finished
[2025-10-11 21:42:46] 2025-10-11 19:42:10,711 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 21:42:46] 2025-10-11 19:42:10,765 | INFO     | [data] control thread has finished
[2025-10-11 21:42:46] 2025-10-11 19:42:10,769 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 21:42:46] 2025-10-11 19:42:10,852 | INFO     | all job control threads have been joined
[2025-10-11 21:42:46] 2025-10-11 19:42:10,926 | INFO     | all payload control threads have been joined
[2025-10-11 21:42:46] 2025-10-11 19:42:10,930 | INFO     | [job] job monitor thread has finished
[2025-10-11 21:42:46] 2025-10-11 19:42:11,083 | INFO     | [data] copytool_in thread has finished
[2025-10-11 21:42:46] 2025-10-11 19:42:11,088 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 21:42:46] 2025-10-11 19:42:11,202 | INFO     | [payload] failed_post thread has finished
[2025-10-11 21:42:46] 2025-10-11 19:42:11,338 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 21:42:46] 2025-10-11 19:42:11,708 | INFO     | [data] copytool_out thread has finished
[2025-10-11 21:42:46] 2025-10-11 19:42:11,858 | INFO     | [job] control thread has finished
[2025-10-11 21:42:46] 2025-10-11 19:42:11,864 | INFO     | [job] validate thread has finished
[2025-10-11 21:42:46] 2025-10-11 19:42:11,932 | INFO     | [payload] control thread has finished
[2025-10-11 21:42:46] 2025-10-11 19:42:11,936 | INFO     | [payload] validate_post thread has finished
[2025-10-11 21:42:46] 2025-10-11 19:42:12,347 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 21:42:46] 2025-10-11 19:42:16,353 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 21:42:46] 2025-10-11 19:42:40,660 | INFO     | [monitor] cgroup control has ended
[2025-10-11 21:42:46] 2025-10-11 19:42:41,435 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140290018002752)>', '<ExcThread(monitor, started 140289125639936)>']
[2025-10-11 21:42:46] 2025-10-11 19:42:41,866 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 21:42:46] 2025-10-11 19:42:41,866 | INFO     | [monitor] control thread has ended
[2025-10-11 21:42:46] 2025-10-11 19:42:46,458 | INFO     | all workflow threads have been joined
[2025-10-11 21:42:46] 2025-10-11 19:42:46,458 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 21:42:46] 2025-10-11 19:42:46,458 | INFO     | traces error code: 0
[2025-10-11 21:42:46] 2025-10-11 19:42:46,459 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 21:42:46] 2025-10-11 19:42:46,529 [wrapper] ==== pilot stdout END ====
[2025-10-11 21:42:46] 2025-10-11 19:42:46,531 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 21:42:46] 2025-10-11 19:42:46,534 [wrapper] pilotpid: 2875992
[2025-10-11 21:42:46] 2025-10-11 19:42:46,536 [wrapper] Pilot exit status: 0
[2025-10-11 21:42:46] 2025-10-11 19:42:46,544 [wrapper] pandaids: 6838182208
[2025-10-11 21:42:46] 2025-10-11 19:42:46,562 [wrapper] cleanup supervisor_pilot 2896629 2875993
[2025-10-11 21:42:46] 2025-10-11 19:42:46,564 [wrapper] Test setup, not cleaning
[2025-10-11 21:42:46] 2025-10-11 19:42:46,566 [wrapper] apfmon messages muted
[2025-10-11 21:42:46] 2025-10-11 19:42:46,568 [wrapper] ==== wrapper stdout END ====
[2025-10-11 21:42:46] 2025-10-11 19:42:46,570 [wrapper] ==== wrapper stderr END ====
[2025-10-11 21:42:46]  *** Error codes and diagnostics ***
[2025-10-11 21:42:46]     "exeErrorCode": 0,
[2025-10-11 21:42:46]     "exeErrorDiag": "",
[2025-10-11 21:42:46]     "pilotErrorCode": 0,
[2025-10-11 21:42:46]     "pilotErrorDiag": "",
[2025-10-11 21:42:46]  *** Listing of results directory ***
[2025-10-11 21:42:46] total 415404
[2025-10-11 21:42:46] -rw-r--r-- 1 boinc boinc    557409 Oct 11 08:35 pilot3.tar.gz
[2025-10-11 21:42:46] -rwx------ 1 boinc boinc     36292 Oct 11 09:01 runpilot2-wrapper.sh
[2025-10-11 21:42:46] -rw-r--r-- 1 boinc boinc      5112 Oct 11 09:01 queuedata.json
[2025-10-11 21:42:46] -rw-r--r-- 1 boinc boinc       100 Oct 11 20:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 21:42:46] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 20:32 run_atlas
[2025-10-11 21:42:46] -rw-r--r-- 1 boinc boinc       105 Oct 11 20:32 job.xml
[2025-10-11 21:42:46] -rw-r--r-- 2 boinc boinc 223958993 Oct 11 20:32 EVNT.46676267._002139.pool.root.1
[2025-10-11 21:42:46] -rw-r--r-- 2 boinc boinc     15120 Oct 11 20:32 start_atlas.sh
[2025-10-11 21:42:46] drwxrwx--x 2 boinc boinc        68 Oct 11 20:32 shared
[2025-10-11 21:42:46] -rw-r--r-- 2 boinc boinc    569680 Oct 11 20:32 input.tar.gz
[2025-10-11 21:42:46] -rw-r--r-- 1 boinc boinc      6294 Oct 11 20:32 init_data.xml
[2025-10-11 21:42:46] -rw-r--r-- 1 boinc boinc         0 Oct 11 20:32 boinc_lockfile
[2025-10-11 21:42:46] -rw-r--r-- 1 boinc boinc      2550 Oct 11 20:32 pandaJob.out
[2025-10-11 21:42:46] -rw------- 1 boinc boinc    975520 Oct 11 20:32 agis_schedconf.cvmfs.json
[2025-10-11 21:42:46] -rw------- 1 boinc boinc   1560580 Oct 11 20:32 agis_ddmendpoints.agis.ALL.json
[2025-10-11 21:42:46] drwx------ 5 boinc boinc      4096 Oct 11 20:32 pilot3
[2025-10-11 21:42:46] -rw------- 1 boinc boinc        95 Oct 11 21:41 pilot_heartbeat.json
[2025-10-11 21:42:46] -rw------- 1 boinc boinc 195555400 Oct 11 21:41 HITS.46676269._053278.pool.root.1
[2025-10-11 21:42:46] -rw-r--r-- 1 boinc boinc       529 Oct 11 21:41 boinc_task_state.xml
[2025-10-11 21:42:46] -rw------- 1 boinc boinc      1014 Oct 11 21:41 memory_monitor_summary.json
[2025-10-11 21:42:46] -rw------- 1 boinc boinc    368816 Oct 11 21:41 log.46676269._053278.job.log.tgz.1
[2025-10-11 21:42:46] -rw------- 1 boinc boinc      7789 Oct 11 21:42 heartbeat.json
[2025-10-11 21:42:46] -rw-r--r-- 1 boinc boinc      8192 Oct 11 21:42 boinc_mmap_file
[2025-10-11 21:42:46] -rw-r--r-- 1 boinc boinc        27 Oct 11 21:42 wrapper_checkpoint.txt
[2025-10-11 21:42:46] -rw------- 1 boinc boinc      4740 Oct 11 21:42 pilotlog.txt
[2025-10-11 21:42:46] -rw------- 1 boinc boinc    611214 Oct 11 21:42 log.46676269._053278.job.log.1
[2025-10-11 21:42:46] -rw------- 1 boinc boinc       357 Oct 11 21:42 output.list
[2025-10-11 21:42:46] -rw-r--r-- 1 boinc boinc       620 Oct 11 21:42 runtime_log
[2025-10-11 21:42:46] -rw------- 1 boinc boinc   1003520 Oct 11 21:42 result.tar.gz
[2025-10-11 21:42:46] -rw-r--r-- 1 boinc boinc      8727 Oct 11 21:42 runtime_log.err
[2025-10-11 21:42:46] -rw------- 1 boinc boinc       656 Oct 11 21:42 nTkNDmlmiR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm6QRMDmcAgJ1m.diag
[2025-10-11 21:42:46] -rw-r--r-- 1 boinc boinc     22404 Oct 11 21:42 stderr.txt
[2025-10-11 21:42:46] HITS file was successfully produced:
[2025-10-11 21:42:46] -rw------- 1 boinc boinc 195555400 Oct 11 21:41 shared/HITS.pool.root.1
[2025-10-11 21:42:46]  *** Contents of shared directory: ***
[2025-10-11 21:42:46] total 411244
[2025-10-11 21:42:46] -rw-r--r-- 2 boinc boinc 223958993 Oct 11 20:32 ATLAS.root_0
[2025-10-11 21:42:46] -rw-r--r-- 2 boinc boinc     15120 Oct 11 20:32 start_atlas.sh
[2025-10-11 21:42:46] -rw-r--r-- 2 boinc boinc    569680 Oct 11 20:32 input.tar.gz
[2025-10-11 21:42:46] -rw------- 1 boinc boinc 195555400 Oct 11 21:41 HITS.pool.root.1
[2025-10-11 21:42:46] -rw------- 1 boinc boinc   1003520 Oct 11 21:42 result.tar.gz
21:42:47 (2872225): run_atlas exited; CPU time 44853.189668
21:42:47 (2872225): called boinc_finish(0)

</stderr_txt>
]]>

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