Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:36:21 (50741): wrapper (7.7.26015): starting
08:36:21 (50741): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 08:36:21] Arguments: --nthreads 12
[2025-10-11 08:36:21] Threads: 12
[2025-10-11 08:36:21] Checking for CVMFS
[2025-10-11 08:36:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 08:36:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 08:36:21] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 08:36:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 08:36:21] 2.13.2.0 135553 2761 115980 151584 0 233 30714443 32503808 7580 16776704 0 45801914 99.970 3049251 51241 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 08:36:21] CVMFS is ok
[2025-10-11 08:36:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 08:36:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 08:36:21] Further information can be found at the LHC@home message board.
[2025-10-11 08:36:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 08:36:21] Checking for apptainer binary...
[2025-10-11 08:36:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 08:36:21] Running /usr/bin/apptainer --version
[2025-10-11 08:36:21] apptainer version 1.4.3-1.el9
[2025-10-11 08:36:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 08:36:21] c8-7-2.aglt2.org
[2025-10-11 08:36:21] apptainer works
[2025-10-11 08:36:21] Set ATHENA_PROC_NUMBER=12
[2025-10-11 08:36:21] Set ATHENA_CORE_NUMBER=12
[2025-10-11 08:36:21] Starting ATLAS job with PandaID=6837875684
[2025-10-11 08:36:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 09:04:52]  *** The last 200 lines of the pilot log: ***
[2025-10-11 09:04:52]  scope=mc23_13p6TeV
[2025-10-11 09:04:52]  status=None
[2025-10-11 09:04:52]  status_code=0
[2025-10-11 09:04:52]  storage_token=
[2025-10-11 09:04:52]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6837875684/log.46676269._047638.job.log.tgz.1
[2025-10-11 09:04:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1e/21/log.46676269._047638.job.log.tgz.1
[2025-10-11 09:04:52]  workdir=None
[2025-10-11 09:04:52] ]
[2025-10-11 09:04:52] 2025-10-11 13:04:14,628 | INFO     | transferring file log.46676269._047638.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6837875684/log.46676269._047638.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-11 09:04:52] 2025-10-11 13:04:14,628 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6837875684/log.46676269._047638.job.log.tgz.1 /tmp/boinchome/slots/2/log.46676269._047638.job
[2025-10-11 09:04:52] 2025-10-11 13:04:14,642 | INFO     | adding to output.list: log.46676269._047638.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1e/21/log.46676269._047638.job.log.tg
[2025-10-11 09:04:52] 2025-10-11 13:04:14,642 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 09:04:52] 2025-10-11 13:04:14,642 | INFO     | summary of transferred files:
[2025-10-11 09:04:52] 2025-10-11 13:04:14,642 | INFO     |  -- lfn=log.46676269._047638.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 09:04:52] 2025-10-11 13:04:14,642 | INFO     | stage-out finished correctly
[2025-10-11 09:04:52] 2025-10-11 13:04:14,971 | WARNING  | process 61716 can no longer be monitored (due to stat problems) - aborting
[2025-10-11 09:04:52] 2025-10-11 13:04:14,971 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6837875684/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 09:04:52] 2025-10-11 13:04:15,210 | INFO     | number of running child processes to parent process 61716: 1
[2025-10-11 09:04:52] 2025-10-11 13:04:15,210 | INFO     | maximum number of monitored processes: 6
[2025-10-11 09:04:52] 2025-10-11 13:04:16,279 | INFO     | time since job start (1668s) is within the limit (172800.0s)
[2025-10-11 09:04:52] 2025-10-11 13:04:16,587 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 09:04:52] 2025-10-11 13:04:16,920 | INFO     | job 6837875684 has state=finished
[2025-10-11 09:04:52] 2025-10-11 13:04:16,921 | INFO     | preparing for final server update for job 6837875684 in state='finished'
[2025-10-11 09:04:52] 2025-10-11 13:04:16,921 | INFO     | this job has now completed (state=finished)
[2025-10-11 09:04:52] 2025-10-11 13:04:16,921 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 09:04:52] 2025-10-11 13:04:16,921 | INFO     | log transfer has been attempted: DONE
[2025-10-11 09:04:52] 2025-10-11 13:04:16,921 | INFO     | job 6837875684 has finished - writing final server update
[2025-10-11 09:04:52] 2025-10-11 13:04:16,921 | INFO     | total number of processed events: 400 (read)
[2025-10-11 09:04:52] 2025-10-11 13:04:16,922 | INFO     | executing command: lscpu
[2025-10-11 09:04:52] 2025-10-11 13:04:16,971 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 09:04:52] 2025-10-11 13:04:17,712 | INFO     | monitor loop #126: job 0:6837875684 is in state 'finished'
[2025-10-11 09:04:52] 2025-10-11 13:04:17,713 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 09:04:52] 2025-10-11 13:04:17,783 | INFO     | PID=54535 has CPU usage=9.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 09:04:52] 2025-10-11 13:04:17,783 | INFO     | .. there are 10 such processes running
[2025-10-11 09:04:52] 2025-10-11 13:04:18,784 | INFO     | time since job start (1670s) is within the limit (172800.0s)
[2025-10-11 09:04:52] 2025-10-11 13:04:19,878 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-11 09:04:52] 2025-10-11 13:04:19,895 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3529.439351562497
[2025-10-11 09:04:52] 2025-10-11 13:04:19,907 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6837875684/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 09:04:52] 2025-10-11 13:04:19,907 | INFO     | extracted standard info from prmon json
[2025-10-11 09:04:52] 2025-10-11 13:04:19,908 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 09:04:52] 2025-10-11 13:04:19,908 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 09:04:52] 2025-10-11 13:04:19,908 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 09:04:52] 2025-10-11 13:04:19,908 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 09:04:52] 2025-10-11 13:04:19,908 | INFO     | fitting pss+swap vs Time
[2025-10-11 09:04:52] 2025-10-11 13:04:19,909 | INFO     | sum of square deviations: 2474465.0
[2025-10-11 09:04:52] 2025-10-11 13:04:19,909 | INFO     | sum of deviations: 151597688.0
[2025-10-11 09:04:52] 2025-10-11 13:04:19,909 | INFO     | mean x: 1760187093.5
[2025-10-11 09:04:52] 2025-10-11 13:04:19,909 | INFO     | mean y: 2415959.2
[2025-10-11 09:04:52] 2025-10-11 13:04:19,909 | INFO     | -- intersect: -107835154514.43362
[2025-10-11 09:04:52] 2025-10-11 13:04:19,909 | INFO     | intersect: -107835154514.43362
[2025-10-11 09:04:52] 2025-10-11 13:04:19,909 | INFO     | chi2: 0.0017824303563542044
[2025-10-11 09:04:52] 2025-10-11 13:04:19,909 | INFO     | -- intersect: -107835154514.43362
[2025-10-11 09:04:52] 2025-10-11 13:04:19,909 | INFO     | current memory leak: 61.26 B/s (using 20 data points, chi2=0.00)
[2025-10-11 09:04:52] 2025-10-11 13:04:19,909 | INFO     | could have reported an average CPU frequency of 3500 MHz (4 samples)
[2025-10-11 09:04:52] 2025-10-11 13:04:19,909 | INFO     | ..............................
[2025-10-11 09:04:52] 2025-10-11 13:04:19,910 | INFO     | . Timing measurements:
[2025-10-11 09:04:52] 2025-10-11 13:04:19,910 | INFO     | . get job = 0 s
[2025-10-11 09:04:52] 2025-10-11 13:04:19,910 | INFO     | . initial setup = 2 s
[2025-10-11 09:04:52] 2025-10-11 13:04:19,910 | INFO     | . payload setup = 3 s
[2025-10-11 09:04:52] 2025-10-11 13:04:19,910 | INFO     | . stage-in = 0 s
[2025-10-11 09:04:52] 2025-10-11 13:04:19,910 | INFO     | . payload execution = 1645 s
[2025-10-11 09:04:52] 2025-10-11 13:04:19,910 | INFO     | . stage-out = 0 s
[2025-10-11 09:04:52] 2025-10-11 13:04:19,910 | INFO     | . log creation = 0 s
[2025-10-11 09:04:52] 2025-10-11 13:04:19,910 | INFO     | ..............................
[2025-10-11 09:04:52] 2025-10-11 13:04:19,955 | INFO     | 
[2025-10-11 09:04:52] 2025-10-11 13:04:19,955 | INFO     | job summary report
[2025-10-11 09:04:52] 2025-10-11 13:04:19,955 | INFO     | --------------------------------------------------
[2025-10-11 09:04:52] 2025-10-11 13:04:19,956 | INFO     | PanDA job id: 6837875684
[2025-10-11 09:04:52] 2025-10-11 13:04:19,956 | INFO     | task id: 46676269
[2025-10-11 09:04:52] 2025-10-11 13:04:19,956 | INFO     | errors: (none)
[2025-10-11 09:04:52] 2025-10-11 13:04:19,956 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 09:04:52] 2025-10-11 13:04:19,956 | INFO     | pilot state: finished 
[2025-10-11 09:04:52] 2025-10-11 13:04:19,956 | INFO     | transexitcode: 0
[2025-10-11 09:04:52] 2025-10-11 13:04:19,956 | INFO     | exeerrorcode: 0
[2025-10-11 09:04:52] 2025-10-11 13:04:19,956 | INFO     | exeerrordiag: 
[2025-10-11 09:04:52] 2025-10-11 13:04:19,956 | INFO     | exitcode: 0
[2025-10-11 09:04:52] 2025-10-11 13:04:19,956 | INFO     | exitmsg: OK
[2025-10-11 09:04:52] 2025-10-11 13:04:19,956 | INFO     | cpuconsumptiontime: 17532 s
[2025-10-11 09:04:52] 2025-10-11 13:04:19,956 | INFO     | nevents: 400
[2025-10-11 09:04:52] 2025-10-11 13:04:19,956 | INFO     | neventsw: 0
[2025-10-11 09:04:52] 2025-10-11 13:04:19,956 | INFO     | pid: 61716
[2025-10-11 09:04:52] 2025-10-11 13:04:19,956 | INFO     | pgrp: 61716
[2025-10-11 09:04:52] 2025-10-11 13:04:19,956 | INFO     | corecount: 12
[2025-10-11 09:04:52] 2025-10-11 13:04:19,956 | INFO     | event service: False
[2025-10-11 09:04:52] 2025-10-11 13:04:19,956 | INFO     | sizes: {0: 2348855, 3: 2349117, 10: 2349145, 1652: 2374010, 1653: 2383008, 1655: 2383064, 1658: 2383386}
[2025-10-11 09:04:52] 2025-10-11 13:04:19,956 | INFO     | --------------------------------------------------
[2025-10-11 09:04:52] 2025-10-11 13:04:19,956 | INFO     | 
[2025-10-11 09:04:52] 2025-10-11 13:04:19,956 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-11 09:04:52] 2025-10-11 13:04:19,972 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 09:04:52] 2025-10-11 13:04:19,972 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 09:04:52] 2025-10-11 13:04:19,972 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 09:04:52] 2025-10-11 13:04:19,972 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 09:04:52] 2025-10-11 13:04:19,972 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 09:04:52] 2025-10-11 13:04:19,972 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 09:04:52] 2025-10-11 13:04:19,972 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 09:04:52] 2025-10-11 13:04:19,972 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 09:04:52] 2025-10-11 13:04:19,972 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 09:04:52] 2025-10-11 13:04:19,972 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 09:04:52] 2025-10-11 13:04:19,972 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 09:04:52] 2025-10-11 13:04:19,972 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 09:04:52] 2025-10-11 13:04:19,972 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 09:04:52] 2025-10-11 13:04:19,972 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 09:04:52] 2025-10-11 13:04:19,972 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 09:04:52] 2025-10-11 13:04:19,972 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 09:04:52] 2025-10-11 13:04:19,973 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 09:04:52] 2025-10-11 13:04:19,973 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 09:04:52] 2025-10-11 13:04:19,973 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 09:04:52] 2025-10-11 13:04:19,973 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 09:04:52] 2025-10-11 13:04:19,973 | INFO     | job 6837875684 has completed (purged errors)
[2025-10-11 09:04:52] 2025-10-11 13:04:19,973 | INFO     | overall cleanup function is called
[2025-10-11 09:04:52] 2025-10-11 13:04:20,980 | INFO     | --- collectZombieJob: --- 10, [61716]
[2025-10-11 09:04:52] 2025-10-11 13:04:20,980 | INFO     | zombie collector waiting for pid 61716
[2025-10-11 09:04:52] 2025-10-11 13:04:20,980 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 09:04:52] 2025-10-11 13:04:20,980 | INFO     | collected zombie processes
[2025-10-11 09:04:52] 2025-10-11 13:04:20,980 | INFO     | will attempt to kill all subprocesses of pid=61716
[2025-10-11 09:04:52] 2025-10-11 13:04:21,248 | INFO     | process IDs to be killed: [61716] (in reverse order)
[2025-10-11 09:04:52] 2025-10-11 13:04:21,366 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 09:04:52] 2025-10-11 13:04:21,366 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 09:04:52] 2025-10-11 13:04:21,384 | INFO     | did not find any defunct processes belonging to 61716
[2025-10-11 09:04:52] 2025-10-11 13:04:21,399 | INFO     | did not find any defunct processes belonging to 61716
[2025-10-11 09:04:52] 2025-10-11 13:04:21,399 | INFO     | ready for new job
[2025-10-11 09:04:52] 2025-10-11 13:04:21,399 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 09:04:52] 2025-10-11 13:04:21,400 | INFO     | ***************************************
[2025-10-11 09:04:52] 2025-10-11 13:04:21,400 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 09:04:52] 2025-10-11 13:04:21,400 | INFO     | ***************************************
[2025-10-11 09:04:52] 2025-10-11 13:04:21,400 | INFO     | 
[2025-10-11 09:04:52] 2025-10-11 13:04:21,418 | INFO     | architecture information:
[2025-10-11 09:04:52] 2025-10-11 13:04:21,418 | INFO     | executing command: cat /etc/os-release
[2025-10-11 09:04:52] 2025-10-11 13:04:21,427 | INFO     | cat /etc/os-release:
[2025-10-11 09:04:52] NAME="CentOS Linux"
[2025-10-11 09:04:52] VERSION="7 (Core)"
[2025-10-11 09:04:52] ID="centos"
[2025-10-11 09:04:52] ID_LIKE="rhel fedora"
[2025-10-11 09:04:52] VERSION_ID="7"
[2025-10-11 09:04:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 09:04:52] ANSI_COLOR="0;31"
[2025-10-11 09:04:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 09:04:52] HOME_URL="https://www.centos.org/"
[2025-10-11 09:04:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 09:04:52] 
[2025-10-11 09:04:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 09:04:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 09:04:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 09:04:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 09:04:52] 
[2025-10-11 09:04:52] 2025-10-11 13:04:21,427 | INFO     | ***************************************
[2025-10-11 09:04:52] 2025-10-11 13:04:21,928 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-11 09:04:52] 2025-10-11 13:04:21,937 | INFO     | sufficient remaining disk space (90698678272 B)
[2025-10-11 09:04:52] 2025-10-11 13:04:21,937 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 09:04:52] 2025-10-11 13:04:21,937 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 09:04:52] 2025-10-11 13:04:21,938 | INFO     | update_server=False
[2025-10-11 09:04:52] 2025-10-11 13:04:21,938 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 09:04:52] 2025-10-11 13:04:21,938 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 09:04:52] 2025-10-11 13:04:21,938 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 09:04:52] 2025-10-11 13:04:21,938 | INFO     | aborting loop
[2025-10-11 09:04:52] 2025-10-11 13:04:22,283 | INFO     | all data control threads have been joined
[2025-10-11 09:04:52] 2025-10-11 13:04:22,301 | INFO     | all payload control threads have been joined
[2025-10-11 09:04:52] 2025-10-11 13:04:22,384 | INFO     | all job control threads have been joined
[2025-10-11 09:04:52] 2025-10-11 13:04:22,621 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 09:04:52] 2025-10-11 13:04:22,680 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 09:04:52] 2025-10-11 13:04:22,943 | INFO     | [job] retrieve thread has finished
[2025-10-11 09:04:52] 2025-10-11 13:04:22,943 | INFO     | [job] queue monitor thread has finished
[2025-10-11 09:04:52] 2025-10-11 13:04:22,944 | INFO     | [job] job monitor thread has finished
[2025-10-11 09:04:52] 2025-10-11 13:04:23,267 | INFO     | [payload] validate_post thread has finished
[2025-10-11 09:04:52] 2025-10-11 13:04:23,288 | INFO     | [data] control thread has finished
[2025-10-11 09:04:52] 2025-10-11 13:04:23,306 | INFO     | [payload] control thread has finished
[2025-10-11 09:04:52] 2025-10-11 13:04:23,390 | INFO     | [job] control thread has finished
[2025-10-11 09:04:52] 2025-10-11 13:04:23,421 | INFO     | [job] validate thread has finished
[2025-10-11 09:04:52] 2025-10-11 13:04:23,516 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 09:04:52] 2025-10-11 13:04:23,527 | INFO     | [data] copytool_in thread has finished
[2025-10-11 09:04:52] 2025-10-11 13:04:23,674 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 09:04:52] 2025-10-11 13:04:24,141 | INFO     | [payload] failed_post thread has finished
[2025-10-11 09:04:52] 2025-10-11 13:04:24,239 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 09:04:52] 2025-10-11 13:04:24,685 | INFO     | [data] copytool_out thread has finished
[2025-10-11 09:04:52] 2025-10-11 13:04:26,626 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 09:04:52] 2025-10-11 13:04:30,211 | INFO     | [monitor] cgroup control has ended
[2025-10-11 09:04:52] 2025-10-11 13:04:32,287 | INFO     | job.realtimelogging is not enabled
[2025-10-11 09:04:52] 2025-10-11 13:04:33,293 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 09:04:52] 2025-10-11 13:04:34,754 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140445853116224)>', '<ExcThread(monitor, started 140445220857600)>']
[2025-10-11 09:04:52] 2025-10-11 13:04:39,780 | INFO     | all workflow threads have been joined
[2025-10-11 09:04:52] 2025-10-11 13:04:39,780 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 09:04:52] 2025-10-11 13:04:39,780 | INFO     | traces error code: 0
[2025-10-11 09:04:52] 2025-10-11 13:04:39,780 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 09:04:52] 2025-10-11 13:04:52,151 | INFO     | PID=54535 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 09:04:52] 2025-10-11 13:04:52,151 | INFO     | .. there are 10 such processes running
[2025-10-11 09:04:52] 2025-10-11 13:04:52,151 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 09:04:52] 2025-10-11 13:04:52,151 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 09:04:52] 2025-10-11 13:04:52,151 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 09:04:52] 2025-10-11 13:04:52,151 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 09:04:52] 2025-10-11 13:04:52,151 | INFO     | [monitor] control thread has ended
[2025-10-11 09:04:52] 2025-10-11 13:04:52,258 [wrapper] ==== pilot stdout END ====
[2025-10-11 09:04:52] 2025-10-11 13:04:52,260 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 09:04:52] 2025-10-11 13:04:52,262 [wrapper] pilotpid: 54535
[2025-10-11 09:04:52] 2025-10-11 13:04:52,264 [wrapper] Pilot exit status: 0
[2025-10-11 09:04:52] 2025-10-11 13:04:52,271 [wrapper] pandaids: 6837875684
[2025-10-11 09:04:52] 2025-10-11 13:04:52,343 [wrapper] cleanup supervisor_pilot  163559 54536
[2025-10-11 09:04:52] 2025-10-11 13:04:52,345 [wrapper] Test setup, not cleaning
[2025-10-11 09:04:52] 2025-10-11 13:04:52,347 [wrapper] apfmon messages muted
[2025-10-11 09:04:52] 2025-10-11 13:04:52,348 [wrapper] ==== wrapper stdout END ====
[2025-10-11 09:04:52] 2025-10-11 13:04:52,350 [wrapper] ==== wrapper stderr END ====
[2025-10-11 09:04:52]  *** Error codes and diagnostics ***
[2025-10-11 09:04:52]     "exeErrorCode": 0,
[2025-10-11 09:04:52]     "exeErrorDiag": "",
[2025-10-11 09:04:52]     "pilotErrorCode": 0,
[2025-10-11 09:04:52]     "pilotErrorDiag": "",
[2025-10-11 09:04:52]  *** Listing of results directory ***
[2025-10-11 09:04:52] total 406316
[2025-10-11 09:04:52] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 20:15 pilot3.tar.gz
[2025-10-11 09:04:52] -rwx------. 1 boincer umatlas     36292 Oct 10 20:20 runpilot2-wrapper.sh
[2025-10-11 09:04:52] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 20:20 queuedata.json
[2025-10-11 09:04:52] -rw-r--r--. 1 boincer umatlas       100 Oct 11 08:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 09:04:52] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 08:36 run_atlas
[2025-10-11 09:04:52] -rw-r--r--. 1 boincer umatlas       105 Oct 11 08:36 job.xml
[2025-10-11 09:04:52] -rw-r--r--. 2 boincer umatlas 219007916 Oct 11 08:36 EVNT.46676267._001924.pool.root.1
[2025-10-11 09:04:52] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 08:36 start_atlas.sh
[2025-10-11 09:04:52] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 08:36 shared
[2025-10-11 09:04:52] -rw-r--r--. 2 boincer umatlas    569672 Oct 11 08:36 input.tar.gz
[2025-10-11 09:04:52] -rw-r--r--. 1 boincer umatlas         0 Oct 11 08:36 boinc_lockfile
[2025-10-11 09:04:52] -rw-r--r--. 1 boincer umatlas      2549 Oct 11 08:36 pandaJob.out
[2025-10-11 09:04:52] -rw-------. 1 boincer umatlas    975504 Oct 11 08:36 agis_schedconf.cvmfs.json
[2025-10-11 09:04:52] -rw-------. 1 boincer umatlas   1560580 Oct 11 08:36 agis_ddmendpoints.agis.ALL.json
[2025-10-11 09:04:52] drwx------. 5 boincer umatlas      4096 Oct 11 08:36 pilot3
[2025-10-11 09:04:52] -rw-r--r--. 1 boincer umatlas      7161 Oct 11 09:00 init_data.xml
[2025-10-11 09:04:52] -rw-------. 1 boincer umatlas 191946760 Oct 11 09:03 HITS.46676269._047638.pool.root.1
[2025-10-11 09:04:52] -rw-r--r--. 1 boincer umatlas       529 Oct 11 09:03 boinc_task_state.xml
[2025-10-11 09:04:52] -rw-------. 1 boincer umatlas        95 Oct 11 09:04 pilot_heartbeat.json
[2025-10-11 09:04:52] -rw-------. 1 boincer umatlas      1032 Oct 11 09:04 memory_monitor_summary.json
[2025-10-11 09:04:52] -rw-------. 1 boincer umatlas    328927 Oct 11 09:04 log.46676269._047638.job.log.tgz.1
[2025-10-11 09:04:52] -rw-------. 1 boincer umatlas      7768 Oct 11 09:04 heartbeat.json
[2025-10-11 09:04:52] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 09:04 boinc_mmap_file
[2025-10-11 09:04:52] -rw-r--r--. 1 boincer umatlas        27 Oct 11 09:04 wrapper_checkpoint.txt
[2025-10-11 09:04:52] -rw-------. 1 boincer umatlas       821 Oct 11 09:04 pilotlog.txt
[2025-10-11 09:04:52] -rw-------. 1 boincer umatlas    277396 Oct 11 09:04 log.46676269._047638.job.log.1
[2025-10-11 09:04:52] -rw-------. 1 boincer umatlas       357 Oct 11 09:04 output.list
[2025-10-11 09:04:52] -rw-r--r--. 1 boincer umatlas       620 Oct 11 09:04 runtime_log
[2025-10-11 09:04:52] -rw-------. 1 boincer umatlas    624640 Oct 11 09:04 result.tar.gz
[2025-10-11 09:04:52] -rw-r--r--. 1 boincer umatlas      8695 Oct 11 09:04 runtime_log.err
[2025-10-11 09:04:52] -rw-------. 1 boincer umatlas       647 Oct 11 09:04 FXuKDmhWcR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmnpQMDm8q97Km.diag
[2025-10-11 09:04:52] -rw-r--r--. 1 boincer umatlas     21960 Oct 11 09:04 stderr.txt
[2025-10-11 09:04:52] HITS file was successfully produced:
[2025-10-11 09:04:52] -rw-------. 1 boincer umatlas 191946760 Oct 11 09:03 shared/HITS.pool.root.1
[2025-10-11 09:04:52]  *** Contents of shared directory: ***
[2025-10-11 09:04:52] total 402520
[2025-10-11 09:04:52] -rw-r--r--. 2 boincer umatlas 219007916 Oct 11 08:36 ATLAS.root_0
[2025-10-11 09:04:52] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 08:36 start_atlas.sh
[2025-10-11 09:04:52] -rw-r--r--. 2 boincer umatlas    569672 Oct 11 08:36 input.tar.gz
[2025-10-11 09:04:52] -rw-------. 1 boincer umatlas 191946760 Oct 11 09:03 HITS.pool.root.1
[2025-10-11 09:04:52] -rw-------. 1 boincer umatlas    624640 Oct 11 09:04 result.tar.gz
09:04:54 (50741): run_atlas exited; CPU time 17567.109620
09:04:54 (50741): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN