Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:35:22 (3077153): wrapper (7.7.26015): starting
10:35:22 (3077153): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 10:35:22] Arguments: --nthreads 4
[2025-10-12 10:35:22] Threads: 4
[2025-10-12 10:35:22] Checking for CVMFS
[2025-10-12 10:35:22] No cvmfs_config command found, will try listing directly
[2025-10-12 10:35:22] CVMFS is ok
[2025-10-12 10:35:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 10:35:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 10:35:22] Further information can be found at the LHC@home message board.
[2025-10-12 10:35:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 10:35:22] Checking for apptainer binary...
[2025-10-12 10:35:22] which: no apptainer in ((null))
[2025-10-12 10:35:22] apptainer is not installed, using version from CVMFS
[2025-10-12 10:35:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 10:35:23] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2025-10-12 10:35:23] apptainer works
[2025-10-12 10:35:23] Set ATHENA_PROC_NUMBER=4
[2025-10-12 10:35:23] Set ATHENA_CORE_NUMBER=4
[2025-10-12 10:35:23] Starting ATLAS job with PandaID=6838182008
[2025-10-12 10:35:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 13:35:12]  *** The last 200 lines of the pilot log: ***
[2025-10-12 13:35:12] 2025-10-12 11:29:52,665 | INFO     | monitor loop #758: job 0:6838182008 is in state 'finished'
[2025-10-12 13:35:12] 2025-10-12 11:29:52,666 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 13:35:12] 2025-10-12 11:29:52,842 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 13:35:12] 2025-10-12 11:29:52,851 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2660.0554687499994
[2025-10-12 13:35:12] 2025-10-12 11:29:52,863 | INFO     | using path: /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6838182008/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 13:35:12] 2025-10-12 11:29:52,864 | INFO     | extracted standard info from prmon json
[2025-10-12 13:35:12] 2025-10-12 11:29:52,864 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 13:35:12] 2025-10-12 11:29:52,864 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 13:35:12] 2025-10-12 11:29:52,865 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 13:35:12] 2025-10-12 11:29:52,865 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 13:35:12] 2025-10-12 11:29:52,868 | INFO     | fitting pss+swap vs Time
[2025-10-12 13:35:12] 2025-10-12 11:29:52,869 | INFO     | sum of square deviations: 1550429070.0
[2025-10-12 13:35:12] 2025-10-12 11:29:52,870 | INFO     | sum of deviations: -11621014229.999998
[2025-10-12 13:35:12] 2025-10-12 11:29:52,870 | INFO     | mean x: 1760263348.0
[2025-10-12 13:35:12] 2025-10-12 11:29:52,870 | INFO     | mean y: 2355182.321637427
[2025-10-12 13:35:12] 2025-10-12 11:29:52,870 | INFO     | -- intersect: 13196151539.387775
[2025-10-12 13:35:12] 2025-10-12 11:29:52,870 | INFO     | intersect: 13196151539.387775
[2025-10-12 13:35:12] 2025-10-12 11:29:52,870 | INFO     | chi2: 1.3113578950630989
[2025-10-12 13:35:12] 2025-10-12 11:29:52,871 | INFO     | sum of square deviations: 1418361477.5
[2025-10-12 13:35:12] 2025-10-12 11:29:52,872 | INFO     | sum of deviations: -11078180506.500002
[2025-10-12 13:35:12] 2025-10-12 11:29:52,872 | INFO     | mean x: 1760263195.5
[2025-10-12 13:35:12] 2025-10-12 11:29:52,872 | INFO     | mean y: 2355809.307228916
[2025-10-12 13:35:12] 2025-10-12 11:29:52,872 | INFO     | -- intersect: 13750976120.871986
[2025-10-12 13:35:12] 2025-10-12 11:29:52,872 | INFO     | intersect: 13750976120.871986
[2025-10-12 13:35:12] 2025-10-12 11:29:52,872 | INFO     | chi2: 1.3099322305798884
[2025-10-12 13:35:12] 2025-10-12 11:29:52,873 | INFO     | current chi2=1.3099322305798884 (change=0.10871665840253822 %)
[2025-10-12 13:35:12] 2025-10-12 11:29:52,873 | INFO     | right removable region: 165
[2025-10-12 13:35:12] 2025-10-12 11:29:52,873 | INFO     | sum of square deviations: 1418361477.5
[2025-10-12 13:35:12] 2025-10-12 11:29:52,874 | INFO     | sum of deviations: -27867539205.0
[2025-10-12 13:35:12] 2025-10-12 11:29:52,874 | INFO     | mean x: 1760263500.5
[2025-10-12 13:35:12] 2025-10-12 11:29:52,874 | INFO     | mean y: 2373519.421686747
[2025-10-12 13:35:12] 2025-10-12 11:29:52,874 | INFO     | -- intersect: 34587500716.881325
[2025-10-12 13:35:12] 2025-10-12 11:29:52,874 | INFO     | intersect: 34587500716.881325
[2025-10-12 13:35:12] 2025-10-12 11:29:52,874 | INFO     | chi2: 0.1061439474075245
[2025-10-12 13:35:12] 2025-10-12 11:29:52,875 | INFO     | current chi2=0.1061439474075245 (change=91.90579872915492 %)
[2025-10-12 13:35:12] 2025-10-12 11:29:52,875 | INFO     | sum of square deviations: 1294014960.0
[2025-10-12 13:35:12] 2025-10-12 11:29:52,876 | INFO     | sum of deviations: -21826757760.999996
[2025-10-12 13:35:12] 2025-10-12 11:29:52,876 | INFO     | mean x: 1760263653.0
[2025-10-12 13:35:12] 2025-10-12 11:29:52,876 | INFO     | mean y: 2366149.055900621
[2025-10-12 13:35:12] 2025-10-12 11:29:52,876 | INFO     | -- intersect: 29693559479.25044
[2025-10-12 13:35:12] 2025-10-12 11:29:52,876 | INFO     | intersect: 29693559479.25044
[2025-10-12 13:35:12] 2025-10-12 11:29:52,876 | INFO     | chi2: 0.08100442736000897
[2025-10-12 13:35:12] 2025-10-12 11:29:52,876 | INFO     | current chi2=0.08100442736000897 (change=23.684365111272847 %)
[2025-10-12 13:35:12] 2025-10-12 11:29:52,876 | INFO     | left removable region: 20
[2025-10-12 13:35:12] 2025-10-12 11:29:52,877 | INFO     | sum of square deviations: 945282840.0
[2025-10-12 13:35:12] 2025-10-12 11:29:52,878 | INFO     | sum of deviations: -14271045160.0
[2025-10-12 13:35:12] 2025-10-12 11:29:52,878 | INFO     | mean x: 1760263775.0
[2025-10-12 13:35:12] 2025-10-12 11:29:52,878 | INFO     | mean y: 2357709.0620689653
[2025-10-12 13:35:12] 2025-10-12 11:29:52,878 | INFO     | -- intersect: 26577264989.233448
[2025-10-12 13:35:12] 2025-10-12 11:29:52,878 | INFO     | intersect: 26577264989.233448
[2025-10-12 13:35:12] 2025-10-12 11:29:52,878 | INFO     | chi2: 0.0702671818436515
[2025-10-12 13:35:12] 2025-10-12 11:29:52,878 | INFO     | -- intersect: 26577264989.233448
[2025-10-12 13:35:12] 2025-10-12 11:29:52,878 | INFO     | current memory leak: -15.10 B/s (using 145 data points, chi2=0.07)
[2025-10-12 13:35:12] 2025-10-12 11:29:52,879 | INFO     | could have reported an average CPU frequency of 2641 MHz (9 samples)
[2025-10-12 13:35:12] 2025-10-12 11:29:52,879 | INFO     | ..............................
[2025-10-12 13:35:12] 2025-10-12 11:29:52,879 | INFO     | . Timing measurements:
[2025-10-12 13:35:12] 2025-10-12 11:29:52,879 | INFO     | . get job = 0 s
[2025-10-12 13:35:12] 2025-10-12 11:29:52,879 | INFO     | . initial setup = 1 s
[2025-10-12 13:35:12] 2025-10-12 11:29:52,879 | INFO     | . payload setup = 6 s
[2025-10-12 13:35:12] 2025-10-12 11:29:52,879 | INFO     | . stage-in = 0 s
[2025-10-12 13:35:12] 2025-10-12 11:29:52,879 | INFO     | . payload execution = 10423 s
[2025-10-12 13:35:12] 2025-10-12 11:29:52,880 | INFO     | . stage-out = 0 s
[2025-10-12 13:35:12] 2025-10-12 11:29:52,880 | INFO     | . log creation = 0 s
[2025-10-12 13:35:12] 2025-10-12 11:29:52,880 | INFO     | ..............................
[2025-10-12 13:35:12] 2025-10-12 11:29:53,178 | INFO     | 
[2025-10-12 13:35:12] 2025-10-12 11:29:53,179 | INFO     | job summary report
[2025-10-12 13:35:12] 2025-10-12 11:29:53,179 | INFO     | --------------------------------------------------
[2025-10-12 13:35:12] 2025-10-12 11:29:53,179 | INFO     | PanDA job id: 6838182008
[2025-10-12 13:35:12] 2025-10-12 11:29:53,179 | INFO     | task id: 46676269
[2025-10-12 13:35:12] 2025-10-12 11:29:53,179 | INFO     | errors: (none)
[2025-10-12 13:35:12] 2025-10-12 11:29:53,179 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 13:35:12] 2025-10-12 11:29:53,179 | INFO     | pilot state: finished 
[2025-10-12 13:35:12] 2025-10-12 11:29:53,179 | INFO     | transexitcode: 0
[2025-10-12 13:35:12] 2025-10-12 11:29:53,179 | INFO     | exeerrorcode: 0
[2025-10-12 13:35:12] 2025-10-12 11:29:53,180 | INFO     | exeerrordiag: 
[2025-10-12 13:35:12] 2025-10-12 11:29:53,180 | INFO     | exitcode: 0
[2025-10-12 13:35:12] 2025-10-12 11:29:53,180 | INFO     | exitmsg: OK
[2025-10-12 13:35:12] 2025-10-12 11:29:53,180 | INFO     | cpuconsumptiontime: 39941 s
[2025-10-12 13:35:12] 2025-10-12 11:29:53,180 | INFO     | nevents: 400
[2025-10-12 13:35:12] 2025-10-12 11:29:53,180 | INFO     | neventsw: 0
[2025-10-12 13:35:12] 2025-10-12 11:29:53,180 | INFO     | pid: 3088569
[2025-10-12 13:35:12] 2025-10-12 11:29:53,180 | INFO     | pgrp: 3088569
[2025-10-12 13:35:12] 2025-10-12 11:29:53,180 | INFO     | corecount: 4
[2025-10-12 13:35:12] 2025-10-12 11:29:53,180 | INFO     | event service: False
[2025-10-12 13:35:12] 2025-10-12 11:29:53,180 | INFO     | sizes: {0: 2348697, 1: 2348896, 5: 2349158, 11: 2349214, 10433: 2378020, 10435: 2387040, 10437: 2387224, 10441: 2387482}
[2025-10-12 13:35:12] 2025-10-12 11:29:53,180 | INFO     | --------------------------------------------------
[2025-10-12 13:35:12] 2025-10-12 11:29:53,181 | INFO     | 
[2025-10-12 13:35:12] 2025-10-12 11:29:53,181 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/0
[2025-10-12 13:35:12] 2025-10-12 11:29:53,201 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 13:35:12] 2025-10-12 11:29:53,202 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 13:35:12] 2025-10-12 11:29:53,202 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 13:35:12] 2025-10-12 11:29:53,202 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 13:35:12] 2025-10-12 11:29:53,202 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 13:35:12] 2025-10-12 11:29:53,202 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 13:35:12] 2025-10-12 11:29:53,202 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 13:35:12] 2025-10-12 11:29:53,202 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 13:35:12] 2025-10-12 11:29:53,202 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 13:35:12] 2025-10-12 11:29:53,202 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 13:35:12] 2025-10-12 11:29:53,202 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 13:35:12] 2025-10-12 11:29:53,203 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 13:35:12] 2025-10-12 11:29:53,203 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 13:35:12] 2025-10-12 11:29:53,203 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 13:35:12] 2025-10-12 11:29:53,203 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 13:35:12] 2025-10-12 11:29:53,203 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 13:35:12] 2025-10-12 11:29:53,203 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 13:35:12] 2025-10-12 11:29:53,203 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 13:35:12] 2025-10-12 11:29:53,203 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 13:35:12] 2025-10-12 11:29:53,203 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 13:35:12] 2025-10-12 11:29:53,203 | INFO     | job 6838182008 has completed (purged errors)
[2025-10-12 13:35:12] 2025-10-12 11:29:53,204 | INFO     | overall cleanup function is called
[2025-10-12 13:35:12] 2025-10-12 11:29:54,211 | INFO     | --- collectZombieJob: --- 10, [3088569]
[2025-10-12 13:35:12] 2025-10-12 11:29:54,212 | INFO     | zombie collector waiting for pid 3088569
[2025-10-12 13:35:12] 2025-10-12 11:29:54,212 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 13:35:12] 2025-10-12 11:29:54,212 | INFO     | collected zombie processes
[2025-10-12 13:35:12] 2025-10-12 11:29:54,212 | INFO     | will attempt to kill all subprocesses of pid=3088569
[2025-10-12 13:35:12] 2025-10-12 11:29:54,595 | INFO     | process IDs to be killed: [3088569] (in reverse order)
[2025-10-12 13:35:12] 2025-10-12 11:29:54,712 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 13:35:12] 2025-10-12 11:29:54,712 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 13:35:12] 2025-10-12 11:29:54,726 | INFO     | did not find any defunct processes belonging to 3088569
[2025-10-12 13:35:12] 2025-10-12 11:29:54,737 | INFO     | did not find any defunct processes belonging to 3088569
[2025-10-12 13:35:12] 2025-10-12 11:29:54,738 | INFO     | ready for new job
[2025-10-12 13:35:12] 2025-10-12 11:29:54,738 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 13:35:12] 2025-10-12 11:29:54,740 | INFO     | ***************************************
[2025-10-12 13:35:12] 2025-10-12 11:29:54,741 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 13:35:12] 2025-10-12 11:29:54,741 | INFO     | ***************************************
[2025-10-12 13:35:12] 2025-10-12 11:29:54,741 | INFO     | 
[2025-10-12 13:35:12] 2025-10-12 11:29:54,744 | INFO     | architecture information:
[2025-10-12 13:35:12] 2025-10-12 11:29:54,745 | INFO     | executing command: cat /etc/os-release
[2025-10-12 13:35:12] 2025-10-12 11:29:54,760 | INFO     | cat /etc/os-release:
[2025-10-12 13:35:12] NAME="CentOS Linux"
[2025-10-12 13:35:12] VERSION="7 (Core)"
[2025-10-12 13:35:12] ID="centos"
[2025-10-12 13:35:12] ID_LIKE="rhel fedora"
[2025-10-12 13:35:12] VERSION_ID="7"
[2025-10-12 13:35:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 13:35:12] ANSI_COLOR="0;31"
[2025-10-12 13:35:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 13:35:12] HOME_URL="https://www.centos.org/"
[2025-10-12 13:35:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 13:35:12] 
[2025-10-12 13:35:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 13:35:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 13:35:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 13:35:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 13:35:12] 
[2025-10-12 13:35:12] 2025-10-12 11:29:54,760 | INFO     | ***************************************
[2025-10-12 13:35:12] 2025-10-12 11:29:55,263 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/0
[2025-10-12 13:35:12] 2025-10-12 11:29:55,280 | INFO     | sufficient remaining disk space (693749415936 B)
[2025-10-12 13:35:12] 2025-10-12 11:29:55,281 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 13:35:12] 2025-10-12 11:29:55,281 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 13:35:12] 2025-10-12 11:29:55,281 | INFO     | update_server=False
[2025-10-12 13:35:12] 2025-10-12 11:29:55,281 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 13:35:12] 2025-10-12 11:29:55,282 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 13:35:12] 2025-10-12 11:29:55,282 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 13:35:12] 2025-10-12 11:29:55,528 | INFO     | all data control threads have been joined
[2025-10-12 13:35:12] 2025-10-12 11:29:56,173 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:35:12] 2025-10-12 11:29:56,174 | INFO     | aborting loop
[2025-10-12 13:35:12] 2025-10-12 11:29:56,287 | INFO     | [job] retrieve thread has finished
[2025-10-12 13:35:12] 2025-10-12 11:29:56,331 | INFO     | all job control threads have been joined
[2025-10-12 13:35:12] 2025-10-12 11:29:56,534 | INFO     | [data] control thread has finished
[2025-10-12 13:35:12] 2025-10-12 11:29:56,708 | INFO     | all payload control threads have been joined
[2025-10-12 13:35:12] 2025-10-12 11:29:56,962 | INFO     | [job] validate thread has finished
[2025-10-12 13:35:12] 2025-10-12 11:29:57,145 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 13:35:12] 2025-10-12 11:29:57,179 | INFO     | [job] job monitor thread has finished
[2025-10-12 13:35:12] 2025-10-12 11:29:57,200 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 13:35:12] 2025-10-12 11:29:57,288 | INFO     | [data] copytool_out thread has finished
[2025-10-12 13:35:12] 2025-10-12 11:29:57,337 | INFO     | [job] control thread has finished
[2025-10-12 13:35:12] 2025-10-12 11:29:57,384 | INFO     | [payload] validate_post thread has finished
[2025-10-12 13:35:12] 2025-10-12 11:29:57,417 | INFO     | [data] copytool_in thread has finished
[2025-10-12 13:35:12] 2025-10-12 11:29:57,672 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 13:35:12] 2025-10-12 11:29:57,713 | INFO     | [payload] control thread has finished
[2025-10-12 13:35:12] 2025-10-12 11:29:57,884 | INFO     | [payload] failed_post thread has finished
[2025-10-12 13:35:12] 2025-10-12 11:29:57,986 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:35:12] 2025-10-12 11:29:58,992 | INFO     | [job] queue monitor thread has finished
[2025-10-12 13:35:12] 2025-10-12 11:29:59,288 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 13:35:12] 2025-10-12 11:30:05,406 | INFO     | job.realtimelogging is not enabled
[2025-10-12 13:35:12] 2025-10-12 11:30:06,411 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 13:35:12] 2025-10-12 11:30:26,083 | INFO     | PID=3081227 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 13:35:12] 2025-10-12 11:30:26,084 | INFO     | .. there are 6 such processes running
[2025-10-12 13:35:12] 2025-10-12 11:30:26,084 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 13:35:12] 2025-10-12 11:30:26,084 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 13:35:12] 2025-10-12 11:30:26,084 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 13:35:12] 2025-10-12 11:30:52,555 | INFO     | [monitor] cgroup control has ended
[2025-10-12 13:35:12] 2025-10-12 11:30:54,655 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23388618352448)>', '<ExcThread(monitor, started 23388040980224)>']
[2025-10-12 13:35:12] 2025-10-12 11:30:55,230 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 13:35:12] 2025-10-12 11:30:55,231 | INFO     | [monitor] control thread has ended
[2025-10-12 13:35:12] 2025-10-12 11:30:59,681 | INFO     | all workflow threads have been joined
[2025-10-12 13:35:12] 2025-10-12 11:30:59,681 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 13:35:12] 2025-10-12 11:30:59,681 | INFO     | traces error code: 0
[2025-10-12 13:35:12] 2025-10-12 11:30:59,682 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 13:35:12] 2025-10-12 11:30:59,827 [wrapper] ==== pilot stdout END ====
[2025-10-12 13:35:12] 2025-10-12 11:30:59,830 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 13:35:12] 2025-10-12 11:30:59,833 [wrapper] pilotpid: 3081227
[2025-10-12 13:35:12] 2025-10-12 11:30:59,835 [wrapper] Pilot exit status: 0
[2025-10-12 13:35:12] 2025-10-12 11:30:59,845 [wrapper] pandaids: 6838182008
[2025-10-12 13:35:12] 2025-10-12 11:30:59,921 [wrapper] cleanup supervisor_pilot 3326931 3081228
[2025-10-12 13:35:12] 2025-10-12 11:30:59,924 [wrapper] Test setup, not cleaning
[2025-10-12 13:35:12] 2025-10-12 11:30:59,926 [wrapper] apfmon messages muted
[2025-10-12 13:35:12] 2025-10-12 11:30:59,928 [wrapper] ==== wrapper stdout END ====
[2025-10-12 13:35:12] 2025-10-12 11:30:59,931 [wrapper] ==== wrapper stderr END ====
[2025-10-12 13:35:12]  *** Error codes and diagnostics ***
[2025-10-12 13:35:12]     "exeErrorCode": 0,
[2025-10-12 13:35:12]     "exeErrorDiag": "",
[2025-10-12 13:35:12]     "pilotErrorCode": 0,
[2025-10-12 13:35:12]     "pilotErrorDiag": "",
[2025-10-12 13:35:12]  *** Listing of results directory ***
[2025-10-12 13:35:12] total 408308
[2025-10-12 13:35:12] -rw-r--r-- 1 boinc boinc    557409 Oct 11 08:35 pilot3.tar.gz
[2025-10-12 13:35:12] -rw-r--r-- 1 boinc boinc      5112 Oct 11 08:55 queuedata.json
[2025-10-12 13:35:12] -rwx------ 1 boinc boinc     36292 Oct 11 08:55 runpilot2-wrapper.sh
[2025-10-12 13:35:12] -rw-r--r-- 1 boinc boinc       100 Oct 12 10:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 13:35:12] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 10:35 run_atlas
[2025-10-12 13:35:12] -rw-r--r-- 1 boinc boinc       105 Oct 12 10:35 job.xml
[2025-10-12 13:35:12] -rw-r--r-- 1 boinc boinc      6634 Oct 12 10:35 init_data.xml
[2025-10-12 13:35:12] -rw-r--r-- 2 boinc boinc 223687303 Oct 12 10:35 EVNT.46676267._002133.pool.root.1
[2025-10-12 13:35:12] -rw-r--r-- 2 boinc boinc     15120 Oct 12 10:35 start_atlas.sh
[2025-10-12 13:35:12] drwxrwx--x 2 boinc boinc      4096 Oct 12 10:35 shared
[2025-10-12 13:35:12] -rw-r--r-- 2 boinc boinc    569684 Oct 12 10:35 input.tar.gz
[2025-10-12 13:35:12] -rw-r--r-- 1 boinc boinc         0 Oct 12 10:35 boinc_lockfile
[2025-10-12 13:35:12] -rw-r--r-- 1 boinc boinc      2550 Oct 12 10:35 pandaJob.out
[2025-10-12 13:35:12] -rw------- 1 boinc boinc    975520 Oct 12 10:35 agis_schedconf.cvmfs.json
[2025-10-12 13:35:12] -rw------- 1 boinc boinc   1560580 Oct 12 10:35 agis_ddmendpoints.agis.ALL.json
[2025-10-12 13:35:12] drwx------ 5 boinc boinc      4096 Oct 12 10:35 pilot3
[2025-10-12 13:35:12] -rw------- 1 boinc boinc 186813126 Oct 12 13:29 HITS.46676269._053146.pool.root.1
[2025-10-12 13:35:12] -rw------- 1 boinc boinc        95 Oct 12 13:29 pilot_heartbeat.json
[2025-10-12 13:35:12] -rw-r--r-- 1 boinc boinc       528 Oct 12 13:29 boinc_task_state.xml
[2025-10-12 13:35:12] -rw------- 1 boinc boinc      1034 Oct 12 13:29 memory_monitor_summary.json
[2025-10-12 13:35:12] -rw------- 1 boinc boinc    364389 Oct 12 13:29 log.46676269._053146.job.log.tgz.1
[2025-10-12 13:35:12] -rw------- 1 boinc boinc      7836 Oct 12 13:29 heartbeat.json
[2025-10-12 13:35:12] -rw------- 1 boinc boinc      4905 Oct 12 13:30 pilotlog.txt
[2025-10-12 13:35:12] -rw------- 1 boinc boinc   1485716 Oct 12 13:30 log.46676269._053146.job.log.1
[2025-10-12 13:35:12] -rw------- 1 boinc boinc       357 Oct 12 13:30 output.list
[2025-10-12 13:35:12] -rw-r--r-- 1 boinc boinc       620 Oct 12 13:30 runtime_log
[2025-10-12 13:35:12] -rw------- 1 boinc boinc   1873920 Oct 12 13:30 result.tar.gz
[2025-10-12 13:35:12] -rw-r--r-- 1 boinc boinc      9070 Oct 12 13:30 runtime_log.err
[2025-10-12 13:35:12] -rw------- 1 boinc boinc       666 Oct 12 13:30 PbPKDm7giR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmuhfNDml9NC2n.diag
[2025-10-12 13:35:12] -rw-r--r-- 1 boinc boinc        26 Oct 12 13:34 wrapper_checkpoint.txt
[2025-10-12 13:35:12] -rw-r--r-- 1 boinc boinc      8192 Oct 12 13:35 boinc_mmap_file
[2025-10-12 13:35:12] -rw-r--r-- 1 boinc boinc     20904 Oct 12 13:35 stderr.txt
[2025-10-12 13:35:12] HITS file was successfully produced:
[2025-10-12 13:35:12] -rw------- 1 boinc boinc 186813126 Oct 12 13:29 shared/HITS.pool.root.1
[2025-10-12 13:35:12]  *** Contents of shared directory: ***
[2025-10-12 13:35:12] total 403296
[2025-10-12 13:35:12] -rw-r--r-- 2 boinc boinc 223687303 Oct 12 10:35 ATLAS.root_0
[2025-10-12 13:35:12] -rw-r--r-- 2 boinc boinc     15120 Oct 12 10:35 start_atlas.sh
[2025-10-12 13:35:12] -rw-r--r-- 2 boinc boinc    569684 Oct 12 10:35 input.tar.gz
[2025-10-12 13:35:12] -rw------- 1 boinc boinc 186813126 Oct 12 13:29 HITS.pool.root.1
[2025-10-12 13:35:12] -rw------- 1 boinc boinc   1873920 Oct 12 13:30 result.tar.gz
13:35:14 (3077153): run_atlas exited; CPU time 40369.716744
13:35:14 (3077153): called boinc_finish(0)

</stderr_txt>
]]>

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