Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:10:40 (1474371): wrapper (7.7.26015): starting
09:10:40 (1474371): wrapper: running run_atlas (--nthreads 11)
[2025-10-11 09:10:40] Arguments: --nthreads 11
[2025-10-11 09:10:40] Threads: 11
[2025-10-11 09:10:40] Checking for CVMFS
[2025-10-11 09:10:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 09:10:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 09:10:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 09:10:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 09:10:40] 2.13.2.0 4120630 127864 280976 151584 1 296 20176608 32935937 20382 16776704 0 91405470 99.671 81878545 29885 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 09:10:40] CVMFS is ok
[2025-10-11 09:10:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 09:10:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 09:10:40] Further information can be found at the LHC@home message board.
[2025-10-11 09:10:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 09:10:40] Checking for apptainer binary...
[2025-10-11 09:10:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 09:10:40] Running /usr/bin/apptainer --version
[2025-10-11 09:10:40] apptainer version 1.4.3-1.el9
[2025-10-11 09:10:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 09:10:40] c-5-4.aglt2.org
[2025-10-11 09:10:40] apptainer works
[2025-10-11 09:10:40] Set ATHENA_PROC_NUMBER=11
[2025-10-11 09:10:40] Set ATHENA_CORE_NUMBER=11
[2025-10-11 09:10:40] Starting ATLAS job with PandaID=6838119404
[2025-10-11 09:10:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 10:46:19]  *** The last 200 lines of the pilot log: ***
[2025-10-11 10:46:19]  status=None
[2025-10-11 10:46:19]  status_code=0
[2025-10-11 10:46:19]  storage_token=
[2025-10-11 10:46:19]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6838119404/log.46676269._052754.job.log.tgz.1
[2025-10-11 10:46:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0b/37/log.46676269._052754.job.log.tgz.1
[2025-10-11 10:46:19]  workdir=None
[2025-10-11 10:46:19] ]
[2025-10-11 10:46:19] 2025-10-11 14:45:38,078 | INFO     | transferring file log.46676269._052754.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6838119404/log.46676269._052754.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-11 10:46:19] 2025-10-11 14:45:38,078 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6838119404/log.46676269._052754.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._052754.job
[2025-10-11 10:46:19] 2025-10-11 14:45:38,094 | INFO     | adding to output.list: log.46676269._052754.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0b/37/log.46676269._052754.job.log.tg
[2025-10-11 10:46:19] 2025-10-11 14:45:38,095 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 10:46:19] 2025-10-11 14:45:38,095 | INFO     | summary of transferred files:
[2025-10-11 10:46:19] 2025-10-11 14:45:38,096 | INFO     |  -- lfn=log.46676269._052754.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 10:46:19] 2025-10-11 14:45:38,096 | INFO     | stage-out finished correctly
[2025-10-11 10:46:19] 2025-10-11 14:45:38,613 | INFO     | PID=1484396 has CPU usage=13.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-11 10:46:19] 2025-10-11 14:45:38,613 | INFO     | .. there are 30 such processes running
[2025-10-11 10:46:19] 2025-10-11 14:45:39,614 | INFO     | time since job start (5687s) is within the limit (172800.0s)
[2025-10-11 10:46:19] 2025-10-11 14:45:40,338 | INFO     | monitor loop #407: job 0:6838119404 is in state 'finished'
[2025-10-11 10:46:19] 2025-10-11 14:45:40,339 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 10:46:19] 2025-10-11 14:45:40,971 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 10:46:19] 2025-10-11 14:45:41,618 | INFO     | time since job start (5689s) is within the limit (172800.0s)
[2025-10-11 10:46:19] 2025-10-11 14:45:42,072 | INFO     | job 6838119404 has state=finished
[2025-10-11 10:46:19] 2025-10-11 14:45:42,072 | INFO     | preparing for final server update for job 6838119404 in state='finished'
[2025-10-11 10:46:19] 2025-10-11 14:45:42,073 | INFO     | this job has now completed (state=finished)
[2025-10-11 10:46:19] 2025-10-11 14:45:42,073 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 10:46:19] 2025-10-11 14:45:42,073 | INFO     | log transfer has been attempted: DONE
[2025-10-11 10:46:19] 2025-10-11 14:45:42,073 | INFO     | job 6838119404 has finished - writing final server update
[2025-10-11 10:46:19] 2025-10-11 14:45:42,073 | INFO     | total number of processed events: 400 (read)
[2025-10-11 10:46:19] 2025-10-11 14:45:42,074 | INFO     | executing command: lscpu
[2025-10-11 10:46:19] 2025-10-11 14:45:42,127 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 10:46:19] 2025-10-11 14:45:42,842 | INFO     | monitor loop #408: job 0:6838119404 is in state 'finished'
[2025-10-11 10:46:19] 2025-10-11 14:45:42,842 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 10:46:19] 2025-10-11 14:45:43,626 | INFO     | time since job start (5691s) is within the limit (172800.0s)
[2025-10-11 10:46:19] 2025-10-11 14:45:45,345 | INFO     | monitor loop #409: job 0:6838119404 is in state 'finished'
[2025-10-11 10:46:19] 2025-10-11 14:45:45,345 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 10:46:19] 2025-10-11 14:45:45,632 | INFO     | time since job start (5693s) is within the limit (172800.0s)
[2025-10-11 10:46:19] 2025-10-11 14:45:45,840 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 10:46:19] 2025-10-11 14:45:45,846 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2799.978325
[2025-10-11 10:46:19] 2025-10-11 14:45:45,853 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838119404/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 10:46:19] 2025-10-11 14:45:45,854 | INFO     | extracted standard info from prmon json
[2025-10-11 10:46:19] 2025-10-11 14:45:45,854 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 10:46:19] 2025-10-11 14:45:45,854 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 10:46:19] 2025-10-11 14:45:45,855 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 10:46:19] 2025-10-11 14:45:45,855 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 10:46:19] 2025-10-11 14:45:45,857 | INFO     | fitting pss+swap vs Time
[2025-10-11 10:46:19] 2025-10-11 14:45:45,857 | INFO     | sum of square deviations: 197203697.5
[2025-10-11 10:46:19] 2025-10-11 14:45:45,858 | INFO     | sum of deviations: -596804998.5000001
[2025-10-11 10:46:19] 2025-10-11 14:45:45,858 | INFO     | mean x: 1760191175.5
[2025-10-11 10:46:19] 2025-10-11 14:45:45,858 | INFO     | mean y: 2289698.5465116277
[2025-10-11 10:46:19] 2025-10-11 14:45:45,858 | INFO     | -- intersect: 5329222738.704092
[2025-10-11 10:46:19] 2025-10-11 14:45:45,858 | INFO     | intersect: 5329222738.704092
[2025-10-11 10:46:19] 2025-10-11 14:45:45,859 | INFO     | chi2: 0.039267018417353694
[2025-10-11 10:46:19] 2025-10-11 14:45:45,859 | INFO     | -- intersect: 5329222738.704092
[2025-10-11 10:46:19] 2025-10-11 14:45:45,859 | INFO     | current memory leak: -3.03 B/s (using 86 data points, chi2=0.04)
[2025-10-11 10:46:19] 2025-10-11 14:45:45,859 | INFO     | could have reported an average CPU frequency of 2651 MHz (7 samples)
[2025-10-11 10:46:19] 2025-10-11 14:45:45,860 | INFO     | ..............................
[2025-10-11 10:46:19] 2025-10-11 14:45:45,860 | INFO     | . Timing measurements:
[2025-10-11 10:46:19] 2025-10-11 14:45:45,860 | INFO     | . get job = 0 s
[2025-10-11 10:46:19] 2025-10-11 14:45:45,860 | INFO     | . initial setup = 2 s
[2025-10-11 10:46:19] 2025-10-11 14:45:45,860 | INFO     | . payload setup = 5 s
[2025-10-11 10:46:19] 2025-10-11 14:45:45,860 | INFO     | . stage-in = 0 s
[2025-10-11 10:46:19] 2025-10-11 14:45:45,860 | INFO     | . payload execution = 5659 s
[2025-10-11 10:46:19] 2025-10-11 14:45:45,860 | INFO     | . stage-out = 0 s
[2025-10-11 10:46:19] 2025-10-11 14:45:45,860 | INFO     | . log creation = 0 s
[2025-10-11 10:46:19] 2025-10-11 14:45:45,860 | INFO     | ..............................
[2025-10-11 10:46:19] 2025-10-11 14:45:45,965 | INFO     | 
[2025-10-11 10:46:19] 2025-10-11 14:45:45,966 | INFO     | job summary report
[2025-10-11 10:46:19] 2025-10-11 14:45:45,966 | INFO     | --------------------------------------------------
[2025-10-11 10:46:19] 2025-10-11 14:45:45,966 | INFO     | PanDA job id: 6838119404
[2025-10-11 10:46:19] 2025-10-11 14:45:45,966 | INFO     | task id: 46676269
[2025-10-11 10:46:19] 2025-10-11 14:45:45,966 | INFO     | errors: (none)
[2025-10-11 10:46:19] 2025-10-11 14:45:45,966 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 10:46:19] 2025-10-11 14:45:45,966 | INFO     | pilot state: finished 
[2025-10-11 10:46:19] 2025-10-11 14:45:45,966 | INFO     | transexitcode: 0
[2025-10-11 10:46:19] 2025-10-11 14:45:45,967 | INFO     | exeerrorcode: 0
[2025-10-11 10:46:19] 2025-10-11 14:45:45,967 | INFO     | exeerrordiag: 
[2025-10-11 10:46:19] 2025-10-11 14:45:45,967 | INFO     | exitcode: 0
[2025-10-11 10:46:19] 2025-10-11 14:45:45,967 | INFO     | exitmsg: OK
[2025-10-11 10:46:19] 2025-10-11 14:45:45,967 | INFO     | cpuconsumptiontime: 47480 s
[2025-10-11 10:46:19] 2025-10-11 14:45:45,967 | INFO     | nevents: 400
[2025-10-11 10:46:19] 2025-10-11 14:45:45,967 | INFO     | neventsw: 0
[2025-10-11 10:46:19] 2025-10-11 14:45:45,967 | INFO     | pid: 1493704
[2025-10-11 10:46:19] 2025-10-11 14:45:45,967 | INFO     | pgrp: 1493704
[2025-10-11 10:46:19] 2025-10-11 14:45:45,968 | INFO     | corecount: 11
[2025-10-11 10:46:19] 2025-10-11 14:45:45,968 | INFO     | event service: False
[2025-10-11 10:46:19] 2025-10-11 14:45:45,968 | INFO     | sizes: {0: 2348857, 5: 2349119, 11: 2349175, 5668: 2375879, 5669: 2375878, 5670: 2384932, 5673: 2385116, 5678: 2385310}
[2025-10-11 10:46:19] 2025-10-11 14:45:45,968 | INFO     | --------------------------------------------------
[2025-10-11 10:46:19] 2025-10-11 14:45:45,968 | INFO     | 
[2025-10-11 10:46:19] 2025-10-11 14:45:45,968 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 10:46:19] 2025-10-11 14:45:45,987 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 10:46:19] 2025-10-11 14:45:45,987 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 10:46:19] 2025-10-11 14:45:45,987 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 10:46:19] 2025-10-11 14:45:45,988 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 10:46:19] 2025-10-11 14:45:45,988 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 10:46:19] 2025-10-11 14:45:45,988 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 10:46:19] 2025-10-11 14:45:45,988 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 10:46:19] 2025-10-11 14:45:45,988 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 10:46:19] 2025-10-11 14:45:45,988 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 10:46:19] 2025-10-11 14:45:45,988 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 10:46:19] 2025-10-11 14:45:45,988 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 10:46:19] 2025-10-11 14:45:45,989 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 10:46:19] 2025-10-11 14:45:45,989 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 10:46:19] 2025-10-11 14:45:45,989 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 10:46:19] 2025-10-11 14:45:45,989 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 10:46:19] 2025-10-11 14:45:45,989 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 10:46:19] 2025-10-11 14:45:45,989 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 10:46:19] 2025-10-11 14:45:45,989 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 10:46:19] 2025-10-11 14:45:45,989 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 10:46:19] 2025-10-11 14:45:45,990 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 10:46:19] 2025-10-11 14:45:45,990 | INFO     | job 6838119404 has completed (purged errors)
[2025-10-11 10:46:19] 2025-10-11 14:45:45,990 | INFO     | overall cleanup function is called
[2025-10-11 10:46:19] 2025-10-11 14:45:46,997 | INFO     | --- collectZombieJob: --- 10, [1493704]
[2025-10-11 10:46:19] 2025-10-11 14:45:46,998 | INFO     | zombie collector waiting for pid 1493704
[2025-10-11 10:46:19] 2025-10-11 14:45:46,998 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 10:46:19] 2025-10-11 14:45:46,998 | INFO     | collected zombie processes
[2025-10-11 10:46:19] 2025-10-11 14:45:46,998 | INFO     | will attempt to kill all subprocesses of pid=1493704
[2025-10-11 10:46:19] 2025-10-11 14:45:47,328 | INFO     | process IDs to be killed: [1493704] (in reverse order)
[2025-10-11 10:46:19] 2025-10-11 14:45:47,443 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 10:46:19] 2025-10-11 14:45:47,444 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 10:46:19] 2025-10-11 14:45:47,457 | INFO     | did not find any defunct processes belonging to 1493704
[2025-10-11 10:46:19] 2025-10-11 14:45:47,470 | INFO     | did not find any defunct processes belonging to 1493704
[2025-10-11 10:46:19] 2025-10-11 14:45:47,470 | INFO     | ready for new job
[2025-10-11 10:46:19] 2025-10-11 14:45:47,471 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 10:46:19] 2025-10-11 14:45:47,473 | INFO     | ***************************************
[2025-10-11 10:46:19] 2025-10-11 14:45:47,473 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 10:46:19] 2025-10-11 14:45:47,473 | INFO     | ***************************************
[2025-10-11 10:46:19] 2025-10-11 14:45:47,473 | INFO     | 
[2025-10-11 10:46:19] 2025-10-11 14:45:47,487 | INFO     | architecture information:
[2025-10-11 10:46:19] 2025-10-11 14:45:47,488 | INFO     | executing command: cat /etc/os-release
[2025-10-11 10:46:19] 2025-10-11 14:45:47,502 | INFO     | cat /etc/os-release:
[2025-10-11 10:46:19] NAME="CentOS Linux"
[2025-10-11 10:46:19] VERSION="7 (Core)"
[2025-10-11 10:46:19] ID="centos"
[2025-10-11 10:46:19] ID_LIKE="rhel fedora"
[2025-10-11 10:46:19] VERSION_ID="7"
[2025-10-11 10:46:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 10:46:19] ANSI_COLOR="0;31"
[2025-10-11 10:46:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 10:46:19] HOME_URL="https://www.centos.org/"
[2025-10-11 10:46:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 10:46:19] 
[2025-10-11 10:46:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 10:46:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 10:46:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 10:46:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 10:46:19] 
[2025-10-11 10:46:19] 2025-10-11 14:45:47,503 | INFO     | ***************************************
[2025-10-11 10:46:19] 2025-10-11 14:45:48,006 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 10:46:19] 2025-10-11 14:45:48,022 | INFO     | sufficient remaining disk space (75865522176 B)
[2025-10-11 10:46:19] 2025-10-11 14:45:48,023 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 10:46:19] 2025-10-11 14:45:48,023 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 10:46:19] 2025-10-11 14:45:48,023 | INFO     | update_server=False
[2025-10-11 10:46:19] 2025-10-11 14:45:48,023 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 10:46:19] 2025-10-11 14:45:48,024 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 10:46:19] 2025-10-11 14:45:48,326 | INFO     | all job control threads have been joined
[2025-10-11 10:46:19] 2025-10-11 14:45:48,379 | INFO     | all data control threads have been joined
[2025-10-11 10:46:19] 2025-10-11 14:45:48,428 | INFO     | all payload control threads have been joined
[2025-10-11 10:46:19] 2025-10-11 14:45:48,700 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 10:46:19] 2025-10-11 14:45:48,852 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 10:46:19] 2025-10-11 14:45:48,853 | INFO     | aborting loop
[2025-10-11 10:46:19] 2025-10-11 14:45:49,029 | INFO     | [job] retrieve thread has finished
[2025-10-11 10:46:19] 2025-10-11 14:45:49,085 | INFO     | [data] copytool_in thread has finished
[2025-10-11 10:46:19] 2025-10-11 14:45:49,255 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 10:46:19] 2025-10-11 14:45:49,256 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 10:46:19] 2025-10-11 14:45:49,332 | INFO     | [job] control thread has finished
[2025-10-11 10:46:19] 2025-10-11 14:45:49,385 | INFO     | [data] control thread has finished
[2025-10-11 10:46:19] 2025-10-11 14:45:49,429 | INFO     | [payload] control thread has finished
[2025-10-11 10:46:19] 2025-10-11 14:45:49,583 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 10:46:19] 2025-10-11 14:45:49,674 | INFO     | [job] validate thread has finished
[2025-10-11 10:46:19] 2025-10-11 14:45:49,858 | INFO     | [job] job monitor thread has finished
[2025-10-11 10:46:19] 2025-10-11 14:45:50,146 | INFO     | [payload] failed_post thread has finished
[2025-10-11 10:46:19] 2025-10-11 14:45:50,256 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 10:46:19] 2025-10-11 14:45:50,586 | INFO     | [payload] validate_post thread has finished
[2025-10-11 10:46:19] 2025-10-11 14:45:50,705 | INFO     | [data] copytool_out thread has finished
[2025-10-11 10:46:19] 2025-10-11 14:45:50,977 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 10:46:19] 2025-10-11 14:45:51,979 | INFO     | [job] queue monitor thread has finished
[2025-10-11 10:46:19] 2025-10-11 14:45:52,030 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 10:46:19] 2025-10-11 14:46:01,840 | INFO     | [monitor] cgroup control has ended
[2025-10-11 10:46:19] 2025-10-11 14:46:02,040 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140322514896704)>', '<ExcThread(monitor, started 140322233353984)>']
[2025-10-11 10:46:19] 2025-10-11 14:46:07,065 | INFO     | all workflow threads have been joined
[2025-10-11 10:46:19] 2025-10-11 14:46:07,065 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 10:46:19] 2025-10-11 14:46:07,066 | INFO     | traces error code: 0
[2025-10-11 10:46:19] 2025-10-11 14:46:07,066 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 10:46:19] 2025-10-11 14:46:19,181 | INFO     | PID=1484396 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 10:46:19] 2025-10-11 14:46:19,182 | INFO     | .. there are 30 such processes running
[2025-10-11 10:46:19] 2025-10-11 14:46:19,182 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 10:46:19] 2025-10-11 14:46:19,182 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 10:46:19] 2025-10-11 14:46:19,182 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 10:46:19] 2025-10-11 14:46:19,183 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 10:46:19] 2025-10-11 14:46:19,183 | INFO     | [monitor] control thread has ended
[2025-10-11 10:46:19] 2025-10-11 14:46:19,325 [wrapper] ==== pilot stdout END ====
[2025-10-11 10:46:19] 2025-10-11 14:46:19,327 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 10:46:19] 2025-10-11 14:46:19,329 [wrapper] pilotpid: 1484396
[2025-10-11 10:46:19] 2025-10-11 14:46:19,333 [wrapper] Pilot exit status: 0
[2025-10-11 10:46:19] 2025-10-11 14:46:19,343 [wrapper] pandaids: 6838119404
[2025-10-11 10:46:19] 2025-10-11 14:46:19,389 [wrapper] cleanup supervisor_pilot 1795752 1484397
[2025-10-11 10:46:19] 2025-10-11 14:46:19,391 [wrapper] Test setup, not cleaning
[2025-10-11 10:46:19] 2025-10-11 14:46:19,394 [wrapper] apfmon messages muted
[2025-10-11 10:46:19] 2025-10-11 14:46:19,397 [wrapper] ==== wrapper stdout END ====
[2025-10-11 10:46:19] 2025-10-11 14:46:19,399 [wrapper] ==== wrapper stderr END ====
[2025-10-11 10:46:19]  *** Error codes and diagnostics ***
[2025-10-11 10:46:19]     "exeErrorCode": 0,
[2025-10-11 10:46:19]     "exeErrorDiag": "",
[2025-10-11 10:46:19]     "pilotErrorCode": 0,
[2025-10-11 10:46:19]     "pilotErrorDiag": "",
[2025-10-11 10:46:19]  *** Listing of results directory ***
[2025-10-11 10:46:19] total 412640
[2025-10-11 10:46:19] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 02:35 pilot3.tar.gz
[2025-10-11 10:46:19] -rwx------. 1 boincer umatlas     36292 Oct 11 02:40 runpilot2-wrapper.sh
[2025-10-11 10:46:19] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 02:40 queuedata.json
[2025-10-11 10:46:19] -rw-r--r--. 1 boincer umatlas       100 Oct 11 09:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 10:46:19] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 09:10 run_atlas
[2025-10-11 10:46:19] -rw-r--r--. 1 boincer umatlas       105 Oct 11 09:10 job.xml
[2025-10-11 10:46:19] -rw-r--r--. 2 boincer umatlas 224290455 Oct 11 09:10 EVNT.46676267._002120.pool.root.1
[2025-10-11 10:46:19] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 09:10 start_atlas.sh
[2025-10-11 10:46:19] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 09:10 shared
[2025-10-11 10:46:19] -rw-r--r--. 2 boincer umatlas    569682 Oct 11 09:10 input.tar.gz
[2025-10-11 10:46:19] -rw-r--r--. 1 boincer umatlas         0 Oct 11 09:10 boinc_lockfile
[2025-10-11 10:46:19] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 09:10 pandaJob.out
[2025-10-11 10:46:19] -rw-------. 1 boincer umatlas    975504 Oct 11 09:10 agis_schedconf.cvmfs.json
[2025-10-11 10:46:19] -rw-------. 1 boincer umatlas   1560580 Oct 11 09:10 agis_ddmendpoints.agis.ALL.json
[2025-10-11 10:46:19] drwx------. 5 boincer umatlas      4096 Oct 11 09:10 pilot3
[2025-10-11 10:46:19] -rw-r--r--. 1 boincer umatlas      6654 Oct 11 10:38 init_data.xml
[2025-10-11 10:46:19] -rw-------. 1 boincer umatlas 191939479 Oct 11 10:45 HITS.46676269._052754.pool.root.1
[2025-10-11 10:46:19] -rw-r--r--. 1 boincer umatlas       529 Oct 11 10:45 boinc_task_state.xml
[2025-10-11 10:46:19] -rw-------. 1 boincer umatlas        95 Oct 11 10:45 pilot_heartbeat.json
[2025-10-11 10:46:19] -rw-------. 1 boincer umatlas      1051 Oct 11 10:45 memory_monitor_summary.json
[2025-10-11 10:46:19] -rw-------. 1 boincer umatlas    388845 Oct 11 10:45 log.46676269._052754.job.log.tgz.1
[2025-10-11 10:46:19] -rw-------. 1 boincer umatlas      7814 Oct 11 10:45 heartbeat.json
[2025-10-11 10:46:19] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 10:46 boinc_mmap_file
[2025-10-11 10:46:19] -rw-r--r--. 1 boincer umatlas        27 Oct 11 10:46 wrapper_checkpoint.txt
[2025-10-11 10:46:19] -rw-------. 1 boincer umatlas       823 Oct 11 10:46 pilotlog.txt
[2025-10-11 10:46:19] -rw-------. 1 boincer umatlas    817246 Oct 11 10:46 log.46676269._052754.job.log.1
[2025-10-11 10:46:19] -rw-------. 1 boincer umatlas       357 Oct 11 10:46 output.list
[2025-10-11 10:46:19] -rw-r--r--. 1 boincer umatlas       620 Oct 11 10:46 runtime_log
[2025-10-11 10:46:19] -rw-------. 1 boincer umatlas   1228800 Oct 11 10:46 result.tar.gz
[2025-10-11 10:46:19] -rw-r--r--. 1 boincer umatlas      8690 Oct 11 10:46 runtime_log.err
[2025-10-11 10:46:19] -rw-------. 1 boincer umatlas       650 Oct 11 10:46 ifVKDmiSiR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm5ORMDmth72Jo.diag
[2025-10-11 10:46:19] -rw-r--r--. 1 boincer umatlas     22110 Oct 11 10:46 stderr.txt
[2025-10-11 10:46:19] HITS file was successfully produced:
[2025-10-11 10:46:19] -rw-------. 1 boincer umatlas 191939479 Oct 11 10:45 shared/HITS.pool.root.1
[2025-10-11 10:46:19]  *** Contents of shared directory: ***
[2025-10-11 10:46:19] total 408260
[2025-10-11 10:46:19] -rw-r--r--. 2 boincer umatlas 224290455 Oct 11 09:10 ATLAS.root_0
[2025-10-11 10:46:19] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 09:10 start_atlas.sh
[2025-10-11 10:46:19] -rw-r--r--. 2 boincer umatlas    569682 Oct 11 09:10 input.tar.gz
[2025-10-11 10:46:19] -rw-------. 1 boincer umatlas 191939479 Oct 11 10:45 HITS.pool.root.1
[2025-10-11 10:46:19] -rw-------. 1 boincer umatlas   1228800 Oct 11 10:46 result.tar.gz
10:46:20 (1474371): run_atlas exited; CPU time 47653.207572
10:46:20 (1474371): called boinc_finish(0)

</stderr_txt>
]]>

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