Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:42:07 (4168950): wrapper (7.7.26015): starting
08:42:07 (4168950): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 08:42:07] Arguments: --nthreads 8
[2025-10-11 08:42:07] Threads: 8
[2025-10-11 08:42:07] Checking for CVMFS
[2025-10-11 08:42:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 08:42:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 08:42:07] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 08:42:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 08:42:08] 2.13.2.0 953388 84882 373688 151584 3 513 23823452 32935937 41988 16776704 0 449745759 99.716 318928461 16680 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 08:42:08] CVMFS is ok
[2025-10-11 08:42:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 08:42:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 08:42:08] Further information can be found at the LHC@home message board.
[2025-10-11 08:42:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 08:42:08] Checking for apptainer binary...
[2025-10-11 08:42:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 08:42:08] Running /usr/bin/apptainer --version
[2025-10-11 08:42:08] apptainer version 1.4.3-1.el9
[2025-10-11 08:42:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 08:42:08] c7-2-10.aglt2.org
[2025-10-11 08:42:08] apptainer works
[2025-10-11 08:42:08] Set ATHENA_PROC_NUMBER=8
[2025-10-11 08:42:08] Set ATHENA_CORE_NUMBER=8
[2025-10-11 08:42:08] Starting ATLAS job with PandaID=6838119197
[2025-10-11 08:42:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 11:42:09]  *** The last 200 lines of the pilot log: ***
[2025-10-11 11:42:09] 2025-10-11 15:41:13,498 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 11:42:09] 2025-10-11 15:41:13,498 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 11:42:09] 2025-10-11 15:41:13,501 | INFO     | fitting pss+swap vs Time
[2025-10-11 11:42:09] 2025-10-11 15:41:13,501 | INFO     | sum of square deviations: 1661780065.4285662
[2025-10-11 11:42:09] 2025-10-11 15:41:13,507 | INFO     | sum of deviations: -21324653575.457138
[2025-10-11 11:42:09] 2025-10-11 15:41:13,507 | INFO     | mean x: 1760191931.057143
[2025-10-11 11:42:09] 2025-10-11 15:41:13,507 | INFO     | mean y: 2334631.645714286
[2025-10-11 11:42:09] 2025-10-11 15:41:13,507 | INFO     | -- intersect: 22589850234.33665
[2025-10-11 11:42:09] 2025-10-11 15:41:13,507 | INFO     | intersect: 22589850234.33665
[2025-10-11 11:42:09] 2025-10-11 15:41:13,507 | INFO     | chi2: 2.7299086525459417
[2025-10-11 11:42:09] 2025-10-11 15:41:13,507 | INFO     | sum of square deviations: 1523371217.9117587
[2025-10-11 11:42:09] 2025-10-11 15:41:13,508 | INFO     | sum of deviations: -9370201564.88235
[2025-10-11 11:42:09] 2025-10-11 15:41:13,508 | INFO     | mean x: 1760191778.5588236
[2025-10-11 11:42:09] 2025-10-11 15:41:13,508 | INFO     | mean y: 2347520.188235294
[2025-10-11 11:42:09] 2025-10-11 15:41:13,508 | INFO     | -- intersect: 10829223835.04606
[2025-10-11 11:42:09] 2025-10-11 15:41:13,508 | INFO     | intersect: 10829223835.04606
[2025-10-11 11:42:09] 2025-10-11 15:41:13,509 | INFO     | chi2: 1.90952230219436
[2025-10-11 11:42:09] 2025-10-11 15:41:13,509 | INFO     | current chi2=1.90952230219436 (change=30.05178761518195 %)
[2025-10-11 11:42:09] 2025-10-11 15:41:13,509 | INFO     | sum of square deviations: 1392869495.3939378
[2025-10-11 11:42:09] 2025-10-11 15:41:13,509 | INFO     | sum of deviations: -9138051613.484856
[2025-10-11 11:42:09] 2025-10-11 15:41:13,509 | INFO     | mean x: 1760191626.060606
[2025-10-11 11:42:09] 2025-10-11 15:41:13,510 | INFO     | mean y: 2347795.2484848485
[2025-10-11 11:42:09] 2025-10-11 15:41:13,510 | INFO     | -- intersect: 11550250869.984499
[2025-10-11 11:42:09] 2025-10-11 15:41:13,510 | INFO     | intersect: 11550250869.984499
[2025-10-11 11:42:09] 2025-10-11 15:41:13,510 | INFO     | chi2: 1.9068108127394146
[2025-10-11 11:42:09] 2025-10-11 15:41:13,510 | INFO     | current chi2=1.9068108127394146 (change=0.14199831297227672 %)
[2025-10-11 11:42:09] 2025-10-11 15:41:13,510 | INFO     | right removable region: 164
[2025-10-11 11:42:09] 2025-10-11 15:41:13,531 | INFO     | sum of square deviations: 1523365117.9117587
[2025-10-11 11:42:09] 2025-10-11 15:41:13,532 | INFO     | sum of deviations: -47202703273.91176
[2025-10-11 11:42:09] 2025-10-11 15:41:13,532 | INFO     | mean x: 1760192083.5588236
[2025-10-11 11:42:09] 2025-10-11 15:41:13,533 | INFO     | mean y: 2362779.6411764706
[2025-10-11 11:42:09] 2025-10-11 15:41:13,533 | INFO     | -- intersect: 54543341595.80993
[2025-10-11 11:42:09] 2025-10-11 15:41:13,533 | INFO     | intersect: 54543341595.80993
[2025-10-11 11:42:09] 2025-10-11 15:41:13,533 | INFO     | chi2: 1.1559522358565868
[2025-10-11 11:42:09] 2025-10-11 15:41:13,533 | INFO     | current chi2=1.1559522358565868 (change=57.656010402453084 %)
[2025-10-11 11:42:09] 2025-10-11 15:41:13,543 | INFO     | sum of square deviations: 1392857295.3939378
[2025-10-11 11:42:09] 2025-10-11 15:41:13,544 | INFO     | sum of deviations: -41780712007.242424
[2025-10-11 11:42:09] 2025-10-11 15:41:13,545 | INFO     | mean x: 1760192236.060606
[2025-10-11 11:42:09] 2025-10-11 15:41:13,545 | INFO     | mean y: 2356397.624242424
[2025-10-11 11:42:09] 2025-10-11 15:41:13,545 | INFO     | -- intersect: 52801796179.02163
[2025-10-11 11:42:09] 2025-10-11 15:41:13,545 | INFO     | intersect: 52801796179.02163
[2025-10-11 11:42:09] 2025-10-11 15:41:13,545 | INFO     | chi2: 1.1401520301898
[2025-10-11 11:42:09] 2025-10-11 15:41:13,545 | INFO     | current chi2=1.1401520301898 (change=1.3668562745655695 %)
[2025-10-11 11:42:09] 2025-10-11 15:41:13,545 | INFO     | left removable region: 20
[2025-10-11 11:42:09] 2025-10-11 15:41:13,545 | INFO     | sum of square deviations: 925844649.4375
[2025-10-11 11:42:09] 2025-10-11 15:41:13,546 | INFO     | sum of deviations: -14575753399.125002
[2025-10-11 11:42:09] 2025-10-11 15:41:13,546 | INFO     | mean x: 1760192205.5625
[2025-10-11 11:42:09] 2025-10-11 15:41:13,546 | INFO     | mean y: 2350856.4583333335
[2025-10-11 11:42:09] 2025-10-11 15:41:13,546 | INFO     | -- intersect: 27713401019.062187
[2025-10-11 11:42:09] 2025-10-11 15:41:13,546 | INFO     | intersect: 27713401019.062187
[2025-10-11 11:42:09] 2025-10-11 15:41:13,546 | INFO     | chi2: 0.19786106436810905
[2025-10-11 11:42:09] 2025-10-11 15:41:13,547 | INFO     | -- intersect: 27713401019.062187
[2025-10-11 11:42:09] 2025-10-11 15:41:13,547 | INFO     | current memory leak: -15.74 B/s (using 144 data points, chi2=0.20)
[2025-10-11 11:42:09] 2025-10-11 15:41:13,547 | INFO     | could have reported an average CPU frequency of 3155 MHz (9 samples)
[2025-10-11 11:42:09] 2025-10-11 15:41:13,547 | INFO     | ..............................
[2025-10-11 11:42:09] 2025-10-11 15:41:13,547 | INFO     | . Timing measurements:
[2025-10-11 11:42:09] 2025-10-11 15:41:13,547 | INFO     | . get job = 0 s
[2025-10-11 11:42:09] 2025-10-11 15:41:13,547 | INFO     | . initial setup = 4 s
[2025-10-11 11:42:09] 2025-10-11 15:41:13,547 | INFO     | . payload setup = 14 s
[2025-10-11 11:42:09] 2025-10-11 15:41:13,548 | INFO     | . stage-in = 0 s
[2025-10-11 11:42:09] 2025-10-11 15:41:13,548 | INFO     | . payload execution = 10643 s
[2025-10-11 11:42:09] 2025-10-11 15:41:13,548 | INFO     | . stage-out = 1 s
[2025-10-11 11:42:09] 2025-10-11 15:41:13,548 | INFO     | . log creation = 0 s
[2025-10-11 11:42:09] 2025-10-11 15:41:13,548 | INFO     | ..............................
[2025-10-11 11:42:09] 2025-10-11 15:41:14,034 | INFO     | 
[2025-10-11 11:42:09] 2025-10-11 15:41:14,035 | INFO     | job summary report
[2025-10-11 11:42:09] 2025-10-11 15:41:14,035 | INFO     | --------------------------------------------------
[2025-10-11 11:42:09] 2025-10-11 15:41:14,035 | INFO     | PanDA job id: 6838119197
[2025-10-11 11:42:09] 2025-10-11 15:41:14,035 | INFO     | task id: 46676269
[2025-10-11 11:42:09] 2025-10-11 15:41:14,035 | INFO     | errors: (none)
[2025-10-11 11:42:09] 2025-10-11 15:41:14,035 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 11:42:09] 2025-10-11 15:41:14,035 | INFO     | pilot state: finished 
[2025-10-11 11:42:09] 2025-10-11 15:41:14,035 | INFO     | transexitcode: 0
[2025-10-11 11:42:09] 2025-10-11 15:41:14,035 | INFO     | exeerrorcode: 0
[2025-10-11 11:42:09] 2025-10-11 15:41:14,035 | INFO     | exeerrordiag: 
[2025-10-11 11:42:09] 2025-10-11 15:41:14,035 | INFO     | exitcode: 0
[2025-10-11 11:42:09] 2025-10-11 15:41:14,035 | INFO     | exitmsg: OK
[2025-10-11 11:42:09] 2025-10-11 15:41:14,035 | INFO     | cpuconsumptiontime: 30906 s
[2025-10-11 11:42:09] 2025-10-11 15:41:14,035 | INFO     | nevents: 400
[2025-10-11 11:42:09] 2025-10-11 15:41:14,035 | INFO     | neventsw: 0
[2025-10-11 11:42:09] 2025-10-11 15:41:14,036 | INFO     | pid: 4189199
[2025-10-11 11:42:09] 2025-10-11 15:41:14,036 | INFO     | pgrp: 4189199
[2025-10-11 11:42:09] 2025-10-11 15:41:14,036 | INFO     | corecount: 8
[2025-10-11 11:42:09] 2025-10-11 15:41:14,036 | INFO     | event service: False
[2025-10-11 11:42:09] 2025-10-11 15:41:14,036 | INFO     | sizes: {0: 2348686, 1: 2348885, 12: 2348885, 14: 2349175, 23: 2349203, 10661: 2378014, 10663: 2387012, 10666: 2387068, 10674: 2387326}
[2025-10-11 11:42:09] 2025-10-11 15:41:14,036 | INFO     | --------------------------------------------------
[2025-10-11 11:42:09] 2025-10-11 15:41:14,036 | INFO     | 
[2025-10-11 11:42:09] 2025-10-11 15:41:14,036 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-11 11:42:09] 2025-10-11 15:41:14,060 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 11:42:09] 2025-10-11 15:41:14,060 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 11:42:09] 2025-10-11 15:41:14,060 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 11:42:09] 2025-10-11 15:41:14,061 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 11:42:09] 2025-10-11 15:41:14,061 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 11:42:09] 2025-10-11 15:41:14,061 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 11:42:09] 2025-10-11 15:41:14,061 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 11:42:09] 2025-10-11 15:41:14,061 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 11:42:09] 2025-10-11 15:41:14,061 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 11:42:09] 2025-10-11 15:41:14,061 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 11:42:09] 2025-10-11 15:41:14,061 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 11:42:09] 2025-10-11 15:41:14,061 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 11:42:09] 2025-10-11 15:41:14,061 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 11:42:09] 2025-10-11 15:41:14,061 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 11:42:09] 2025-10-11 15:41:14,061 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 11:42:09] 2025-10-11 15:41:14,061 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 11:42:09] 2025-10-11 15:41:14,061 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 11:42:09] 2025-10-11 15:41:14,062 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 11:42:09] 2025-10-11 15:41:14,062 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 11:42:09] 2025-10-11 15:41:14,062 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 11:42:09] 2025-10-11 15:41:14,062 | INFO     | job 6838119197 has completed (purged errors)
[2025-10-11 11:42:09] 2025-10-11 15:41:14,062 | INFO     | overall cleanup function is called
[2025-10-11 11:42:09] 2025-10-11 15:41:15,085 | INFO     | --- collectZombieJob: --- 10, [4189199]
[2025-10-11 11:42:09] 2025-10-11 15:41:15,085 | INFO     | zombie collector waiting for pid 4189199
[2025-10-11 11:42:09] 2025-10-11 15:41:15,086 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 11:42:09] 2025-10-11 15:41:15,086 | INFO     | collected zombie processes
[2025-10-11 11:42:09] 2025-10-11 15:41:15,086 | INFO     | will attempt to kill all subprocesses of pid=4189199
[2025-10-11 11:42:09] 2025-10-11 15:41:15,972 | INFO     | process IDs to be killed: [4189199] (in reverse order)
[2025-10-11 11:42:09] 2025-10-11 15:41:16,160 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 11:42:09] 2025-10-11 15:41:16,161 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 11:42:09] 2025-10-11 15:41:16,196 | INFO     | did not find any defunct processes belonging to 4189199
[2025-10-11 11:42:09] 2025-10-11 15:41:16,218 | INFO     | did not find any defunct processes belonging to 4189199
[2025-10-11 11:42:09] 2025-10-11 15:41:16,219 | INFO     | ready for new job
[2025-10-11 11:42:09] 2025-10-11 15:41:16,219 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 11:42:09] 2025-10-11 15:41:16,221 | INFO     | ***************************************
[2025-10-11 11:42:09] 2025-10-11 15:41:16,221 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 11:42:09] 2025-10-11 15:41:16,221 | INFO     | ***************************************
[2025-10-11 11:42:09] 2025-10-11 15:41:16,221 | INFO     | 
[2025-10-11 11:42:09] 2025-10-11 15:41:16,242 | INFO     | architecture information:
[2025-10-11 11:42:09] 2025-10-11 15:41:16,242 | INFO     | executing command: cat /etc/os-release
[2025-10-11 11:42:09] 2025-10-11 15:41:16,264 | INFO     | cat /etc/os-release:
[2025-10-11 11:42:09] NAME="CentOS Linux"
[2025-10-11 11:42:09] VERSION="7 (Core)"
[2025-10-11 11:42:09] ID="centos"
[2025-10-11 11:42:09] ID_LIKE="rhel fedora"
[2025-10-11 11:42:09] VERSION_ID="7"
[2025-10-11 11:42:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 11:42:09] ANSI_COLOR="0;31"
[2025-10-11 11:42:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 11:42:09] HOME_URL="https://www.centos.org/"
[2025-10-11 11:42:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 11:42:09] 
[2025-10-11 11:42:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 11:42:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 11:42:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 11:42:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 11:42:09] 
[2025-10-11 11:42:09] 2025-10-11 15:41:16,264 | INFO     | ***************************************
[2025-10-11 11:42:09] 2025-10-11 15:41:16,778 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-11 11:42:09] 2025-10-11 15:41:16,800 | INFO     | sufficient remaining disk space (74050437120 B)
[2025-10-11 11:42:09] 2025-10-11 15:41:16,801 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 11:42:09] 2025-10-11 15:41:16,801 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 11:42:09] 2025-10-11 15:41:16,801 | INFO     | update_server=False
[2025-10-11 11:42:09] 2025-10-11 15:41:16,801 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 11:42:09] 2025-10-11 15:41:16,802 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 11:42:09] 2025-10-11 15:41:16,812 | INFO     | all data control threads have been joined
[2025-10-11 11:42:09] 2025-10-11 15:41:16,949 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 11:42:09] 2025-10-11 15:41:17,054 | INFO     | all payload control threads have been joined
[2025-10-11 11:42:09] 2025-10-11 15:41:17,353 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 11:42:09] 2025-10-11 15:41:17,353 | INFO     | aborting loop
[2025-10-11 11:42:09] 2025-10-11 15:41:17,827 | INFO     | [job] retrieve thread has finished
[2025-10-11 11:42:09] 2025-10-11 15:41:17,828 | INFO     | [data] control thread has finished
[2025-10-11 11:42:09] 2025-10-11 15:41:17,842 | INFO     | all job control threads have been joined
[2025-10-11 11:42:09] 2025-10-11 15:41:18,060 | INFO     | [payload] control thread has finished
[2025-10-11 11:42:09] 2025-10-11 15:41:18,185 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 11:42:09] 2025-10-11 15:41:18,335 | INFO     | [payload] validate_post thread has finished
[2025-10-11 11:42:09] 2025-10-11 15:41:18,359 | INFO     | [job] job monitor thread has finished
[2025-10-11 11:42:09] 2025-10-11 15:41:18,616 | INFO     | [job] validate thread has finished
[2025-10-11 11:42:09] 2025-10-11 15:41:18,639 | INFO     | [data] copytool_in thread has finished
[2025-10-11 11:42:09] 2025-10-11 15:41:18,640 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 11:42:09] 2025-10-11 15:41:18,699 | INFO     | [payload] failed_post thread has finished
[2025-10-11 11:42:09] 2025-10-11 15:41:18,737 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 11:42:09] 2025-10-11 15:41:18,808 | INFO     | [data] copytool_out thread has finished
[2025-10-11 11:42:09] 2025-10-11 15:41:18,848 | INFO     | [job] control thread has finished
[2025-10-11 11:42:09] 2025-10-11 15:41:19,258 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 11:42:09] 2025-10-11 15:41:19,646 | INFO     | [job] queue monitor thread has finished
[2025-10-11 11:42:09] 2025-10-11 15:41:20,957 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 11:42:09] 2025-10-11 15:41:27,308 | INFO     | job.realtimelogging is not enabled
[2025-10-11 11:42:09] 2025-10-11 15:41:28,314 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 11:42:09] 2025-10-11 15:41:46,500 | INFO     | PID=4174721 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 11:42:09] 2025-10-11 15:41:46,500 | INFO     | .. there are 45 such processes running
[2025-10-11 11:42:09] 2025-10-11 15:41:46,501 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 11:42:09] 2025-10-11 15:41:46,501 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 11:42:09] 2025-10-11 15:41:46,501 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 11:42:09] 2025-10-11 15:42:04,230 | INFO     | [monitor] cgroup control has ended
[2025-10-11 11:42:09] 2025-10-11 15:42:04,295 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139634859501376)>', '<ExcThread(monitor, started 139634134734592)>']
[2025-10-11 11:42:09] 2025-10-11 15:42:04,606 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 11:42:09] 2025-10-11 15:42:04,606 | INFO     | [monitor] control thread has ended
[2025-10-11 11:42:09] 2025-10-11 15:42:09,321 | INFO     | all workflow threads have been joined
[2025-10-11 11:42:09] 2025-10-11 15:42:09,321 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 11:42:09] 2025-10-11 15:42:09,322 | INFO     | traces error code: 0
[2025-10-11 11:42:09] 2025-10-11 15:42:09,322 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 11:42:09] 2025-10-11 15:42:09,477 [wrapper] ==== pilot stdout END ====
[2025-10-11 11:42:09] 2025-10-11 15:42:09,480 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 11:42:09] 2025-10-11 15:42:09,482 [wrapper] pilotpid: 4174721
[2025-10-11 11:42:09] 2025-10-11 15:42:09,484 [wrapper] Pilot exit status: 0
[2025-10-11 11:42:09] 2025-10-11 15:42:09,497 [wrapper] pandaids: 6838119197
[2025-10-11 11:42:09] 2025-10-11 15:42:09,620 [wrapper] cleanup supervisor_pilot  537777 4174722
[2025-10-11 11:42:09] 2025-10-11 15:42:09,623 [wrapper] Test setup, not cleaning
[2025-10-11 11:42:09] 2025-10-11 15:42:09,625 [wrapper] apfmon messages muted
[2025-10-11 11:42:09] 2025-10-11 15:42:09,628 [wrapper] ==== wrapper stdout END ====
[2025-10-11 11:42:09] 2025-10-11 15:42:09,630 [wrapper] ==== wrapper stderr END ====
[2025-10-11 11:42:09]  *** Error codes and diagnostics ***
[2025-10-11 11:42:09]     "exeErrorCode": 0,
[2025-10-11 11:42:09]     "exeErrorDiag": "",
[2025-10-11 11:42:09]     "pilotErrorCode": 0,
[2025-10-11 11:42:09]     "pilotErrorDiag": "",
[2025-10-11 11:42:09]  *** Listing of results directory ***
[2025-10-11 11:42:09] total 409036
[2025-10-11 11:42:09] -rwx------. 1 boincer umatlas     36292 Oct 11 02:35 runpilot2-wrapper.sh
[2025-10-11 11:42:09] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 02:35 queuedata.json
[2025-10-11 11:42:09] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 02:35 pilot3.tar.gz
[2025-10-11 11:42:09] -rw-r--r--. 1 boincer umatlas       100 Oct 11 08:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 11:42:09] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 08:42 run_atlas
[2025-10-11 11:42:09] -rw-r--r--. 1 boincer umatlas       105 Oct 11 08:42 job.xml
[2025-10-11 11:42:09] -rw-r--r--. 2 boincer umatlas 223169839 Oct 11 08:42 EVNT.46676267._002113.pool.root.1
[2025-10-11 11:42:09] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 08:42 shared
[2025-10-11 11:42:09] -rw-r--r--. 2 boincer umatlas    569673 Oct 11 08:42 input.tar.gz
[2025-10-11 11:42:09] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 08:42 start_atlas.sh
[2025-10-11 11:42:09] -rw-r--r--. 1 boincer umatlas         0 Oct 11 08:42 boinc_lockfile
[2025-10-11 11:42:09] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 08:42 pandaJob.out
[2025-10-11 11:42:09] -rw-------. 1 boincer umatlas    975504 Oct 11 08:42 agis_schedconf.cvmfs.json
[2025-10-11 11:42:09] -rw-------. 1 boincer umatlas   1560580 Oct 11 08:42 agis_ddmendpoints.agis.ALL.json
[2025-10-11 11:42:09] drwx------. 5 boincer umatlas      4096 Oct 11 08:42 pilot3
[2025-10-11 11:42:09] -rw-r--r--. 1 boincer umatlas      6935 Oct 11 11:40 init_data.xml
[2025-10-11 11:42:09] -rw-------. 1 boincer umatlas 188258809 Oct 11 11:40 HITS.46676269._052585.pool.root.1
[2025-10-11 11:42:09] -rw-r--r--. 1 boincer umatlas       531 Oct 11 11:40 boinc_task_state.xml
[2025-10-11 11:42:09] -rw-------. 1 boincer umatlas      1045 Oct 11 11:40 memory_monitor_summary.json
[2025-10-11 11:42:09] -rw-------. 1 boincer umatlas    412164 Oct 11 11:41 log.46676269._052585.job.log.tgz.1
[2025-10-11 11:42:09] -rw-------. 1 boincer umatlas      7808 Oct 11 11:41 heartbeat.json
[2025-10-11 11:42:09] -rw-------. 1 boincer umatlas        95 Oct 11 11:41 pilot_heartbeat.json
[2025-10-11 11:42:09] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 11:42 boinc_mmap_file
[2025-10-11 11:42:09] -rw-r--r--. 1 boincer umatlas        27 Oct 11 11:42 wrapper_checkpoint.txt
[2025-10-11 11:42:09] -rw-------. 1 boincer umatlas      4896 Oct 11 11:42 pilotlog.txt
[2025-10-11 11:42:09] -rw-------. 1 boincer umatlas   1346084 Oct 11 11:42 log.46676269._052585.job.log.1
[2025-10-11 11:42:09] -rw-------. 1 boincer umatlas       357 Oct 11 11:42 output.list
[2025-10-11 11:42:09] -rw-r--r--. 1 boincer umatlas       620 Oct 11 11:42 runtime_log
[2025-10-11 11:42:09] -rw-------. 1 boincer umatlas   1781760 Oct 11 11:42 result.tar.gz
[2025-10-11 11:42:09] -rw-r--r--. 1 boincer umatlas      8699 Oct 11 11:42 runtime_log.err
[2025-10-11 11:42:09] -rw-------. 1 boincer umatlas       658 Oct 11 11:42 n02NDmoNiR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmqNRMDmri0OMn.diag
[2025-10-11 11:42:09] -rw-r--r--. 1 boincer umatlas     20981 Oct 11 11:42 stderr.txt
[2025-10-11 11:42:09] HITS file was successfully produced:
[2025-10-11 11:42:09] -rw-------. 1 boincer umatlas 188258809 Oct 11 11:40 shared/HITS.pool.root.1
[2025-10-11 11:42:09]  *** Contents of shared directory: ***
[2025-10-11 11:42:09] total 404112
[2025-10-11 11:42:09] -rw-r--r--. 2 boincer umatlas 223169839 Oct 11 08:42 ATLAS.root_0
[2025-10-11 11:42:09] -rw-r--r--. 2 boincer umatlas    569673 Oct 11 08:42 input.tar.gz
[2025-10-11 11:42:09] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 08:42 start_atlas.sh
[2025-10-11 11:42:09] -rw-------. 1 boincer umatlas 188258809 Oct 11 11:40 HITS.pool.root.1
[2025-10-11 11:42:09] -rw-------. 1 boincer umatlas   1781760 Oct 11 11:42 result.tar.gz
11:42:11 (4168950): run_atlas exited; CPU time 31317.863073
11:42:11 (4168950): called boinc_finish(0)

</stderr_txt>
]]>

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