Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:29:12 (2879125): wrapper (7.7.26015): starting
10:29:12 (2879125): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 10:29:12] Arguments: --nthreads 4
[2025-10-12 10:29:12] Threads: 4
[2025-10-12 10:29:12] Checking for CVMFS
[2025-10-12 10:29:12] No cvmfs_config command found, will try listing directly
[2025-10-12 10:29:13] CVMFS is ok
[2025-10-12 10:29:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 10:29:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 10:29:13] Further information can be found at the LHC@home message board.
[2025-10-12 10:29:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 10:29:13] Checking for apptainer binary...
[2025-10-12 10:29:13] which: no apptainer in ((null))
[2025-10-12 10:29:13] apptainer is not installed, using version from CVMFS
[2025-10-12 10:29:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 10:29:13] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2025-10-12 10:29:13] apptainer works
[2025-10-12 10:29:13] Set ATHENA_PROC_NUMBER=4
[2025-10-12 10:29:13] Set ATHENA_CORE_NUMBER=4
[2025-10-12 10:29:13] Starting ATLAS job with PandaID=6838119366
[2025-10-12 10:29:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 13:48:43]  *** The last 200 lines of the pilot log: ***
[2025-10-12 13:48:43] 2025-10-12 11:21:12,562 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 13:48:43] 2025-10-12 11:21:12,563 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 13:48:43] 2025-10-12 11:21:12,563 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 13:48:43] 2025-10-12 11:21:12,566 | INFO     | fitting pss+swap vs Time
[2025-10-12 13:48:43] 2025-10-12 11:21:12,567 | INFO     | sum of square deviations: 1496660620.0
[2025-10-12 13:48:43] 2025-10-12 11:21:12,567 | INFO     | sum of deviations: 9506789671.000004
[2025-10-12 13:48:43] 2025-10-12 11:21:12,567 | INFO     | mean x: 1760262916.0
[2025-10-12 13:48:43] 2025-10-12 11:21:12,567 | INFO     | mean y: 2311830.473372781
[2025-10-12 13:48:43] 2025-10-12 11:21:12,568 | INFO     | -- intersect: -11178879873.543764
[2025-10-12 13:48:43] 2025-10-12 11:21:12,568 | INFO     | intersect: -11178879873.543764
[2025-10-12 13:48:43] 2025-10-12 11:21:12,568 | INFO     | chi2: 2.154136399364165
[2025-10-12 13:48:43] 2025-10-12 11:21:12,568 | INFO     | sum of square deviations: 1367709365.0
[2025-10-12 13:48:43] 2025-10-12 11:21:12,569 | INFO     | sum of deviations: 19253000011.000008
[2025-10-12 13:48:43] 2025-10-12 11:21:12,569 | INFO     | mean x: 1760262763.5
[2025-10-12 13:48:43] 2025-10-12 11:21:12,569 | INFO     | mean y: 2323045.6707317075
[2025-10-12 13:48:43] 2025-10-12 11:21:12,569 | INFO     | -- intersect: -24776580917.62004
[2025-10-12 13:48:43] 2025-10-12 11:21:12,569 | INFO     | intersect: -24776580917.62004
[2025-10-12 13:48:43] 2025-10-12 11:21:12,569 | INFO     | chi2: 1.3453235440193674
[2025-10-12 13:48:43] 2025-10-12 11:21:12,569 | INFO     | current chi2=1.3453235440193674 (change=37.546965715984115 %)
[2025-10-12 13:48:43] 2025-10-12 11:21:12,570 | INFO     | sum of square deviations: 1246386160.0
[2025-10-12 13:48:43] 2025-10-12 11:21:12,570 | INFO     | sum of deviations: 18307315852.000004
[2025-10-12 13:48:43] 2025-10-12 11:21:12,570 | INFO     | mean x: 1760262611.0
[2025-10-12 13:48:43] 2025-10-12 11:21:12,570 | INFO     | mean y: 2321863.0125786164
[2025-10-12 13:48:43] 2025-10-12 11:21:12,570 | INFO     | -- intersect: -25852974542.11055
[2025-10-12 13:48:43] 2025-10-12 11:21:12,571 | INFO     | intersect: -25852974542.11055
[2025-10-12 13:48:43] 2025-10-12 11:21:12,571 | INFO     | chi2: 1.3463061289741145
[2025-10-12 13:48:43] 2025-10-12 11:21:12,571 | INFO     | current chi2=1.3463061289741145 (change=-0.07303707417559162 %)
[2025-10-12 13:48:43] 2025-10-12 11:21:12,571 | INFO     | right removable region: 158
[2025-10-12 13:48:43] 2025-10-12 11:21:12,571 | INFO     | sum of square deviations: 1367709365.0
[2025-10-12 13:48:43] 2025-10-12 11:21:12,572 | INFO     | sum of deviations: -12082375225.0
[2025-10-12 13:48:43] 2025-10-12 11:21:12,572 | INFO     | mean x: 1760263068.5
[2025-10-12 13:48:43] 2025-10-12 11:21:12,572 | INFO     | mean y: 2336984.56097561
[2025-10-12 13:48:43] 2025-10-12 11:21:12,572 | INFO     | -- intersect: 15552540436.101192
[2025-10-12 13:48:43] 2025-10-12 11:21:12,572 | INFO     | intersect: 15552540436.101192
[2025-10-12 13:48:43] 2025-10-12 11:21:12,572 | INFO     | chi2: 0.8533529548980233
[2025-10-12 13:48:43] 2025-10-12 11:21:12,572 | INFO     | current chi2=0.8533529548980233 (change=60.385379721084185 %)
[2025-10-12 13:48:43] 2025-10-12 11:21:12,573 | INFO     | sum of square deviations: 1246386160.0
[2025-10-12 13:48:43] 2025-10-12 11:21:12,573 | INFO     | sum of deviations: -14164132778.0
[2025-10-12 13:48:43] 2025-10-12 11:21:12,573 | INFO     | mean x: 1760263221.0
[2025-10-12 13:48:43] 2025-10-12 11:21:12,573 | INFO     | mean y: 2339573.547169811
[2025-10-12 13:48:43] 2025-10-12 11:21:12,573 | INFO     | -- intersect: 20006253919.381977
[2025-10-12 13:48:43] 2025-10-12 11:21:12,573 | INFO     | intersect: 20006253919.381977
[2025-10-12 13:48:43] 2025-10-12 11:21:12,574 | INFO     | chi2: 0.840271407589658
[2025-10-12 13:48:43] 2025-10-12 11:21:12,574 | INFO     | current chi2=0.840271407589658 (change=1.5329585763171776 %)
[2025-10-12 13:48:43] 2025-10-12 11:21:12,574 | INFO     | left removable region: 20
[2025-10-12 13:48:43] 2025-10-12 11:21:12,574 | INFO     | sum of square deviations: 814878534.5
[2025-10-12 13:48:43] 2025-10-12 11:21:12,575 | INFO     | sum of deviations: -3812403253.9999995
[2025-10-12 13:48:43] 2025-10-12 11:21:12,575 | INFO     | mean x: 1760263190.5
[2025-10-12 13:48:43] 2025-10-12 11:21:12,575 | INFO     | mean y: 2351076.4782608696
[2025-10-12 13:48:43] 2025-10-12 11:21:12,575 | INFO     | -- intersect: 8237729517.850889
[2025-10-12 13:48:43] 2025-10-12 11:21:12,575 | INFO     | intersect: 8237729517.850889
[2025-10-12 13:48:43] 2025-10-12 11:21:12,575 | INFO     | chi2: 0.005519814168242886
[2025-10-12 13:48:43] 2025-10-12 11:21:12,575 | INFO     | -- intersect: 8237729517.850889
[2025-10-12 13:48:43] 2025-10-12 11:21:12,575 | INFO     | current memory leak: -4.68 B/s (using 138 data points, chi2=0.01)
[2025-10-12 13:48:43] 2025-10-12 11:21:12,576 | INFO     | could have reported an average CPU frequency of 2701 MHz (9 samples)
[2025-10-12 13:48:43] 2025-10-12 11:21:12,576 | INFO     | ..............................
[2025-10-12 13:48:43] 2025-10-12 11:21:12,576 | INFO     | . Timing measurements:
[2025-10-12 13:48:43] 2025-10-12 11:21:12,576 | INFO     | . get job = 0 s
[2025-10-12 13:48:43] 2025-10-12 11:21:12,576 | INFO     | . initial setup = 1 s
[2025-10-12 13:48:43] 2025-10-12 11:21:12,576 | INFO     | . payload setup = 5 s
[2025-10-12 13:48:43] 2025-10-12 11:21:12,576 | INFO     | . stage-in = 0 s
[2025-10-12 13:48:43] 2025-10-12 11:21:12,576 | INFO     | . payload execution = 10275 s
[2025-10-12 13:48:43] 2025-10-12 11:21:12,576 | INFO     | . stage-out = 0 s
[2025-10-12 13:48:43] 2025-10-12 11:21:12,576 | INFO     | . log creation = 0 s
[2025-10-12 13:48:43] 2025-10-12 11:21:12,576 | INFO     | ..............................
[2025-10-12 13:48:43] 2025-10-12 11:21:12,654 | INFO     | 
[2025-10-12 13:48:43] 2025-10-12 11:21:12,654 | INFO     | job summary report
[2025-10-12 13:48:43] 2025-10-12 11:21:12,654 | INFO     | --------------------------------------------------
[2025-10-12 13:48:43] 2025-10-12 11:21:12,654 | INFO     | PanDA job id: 6838119366
[2025-10-12 13:48:43] 2025-10-12 11:21:12,654 | INFO     | task id: 46676269
[2025-10-12 13:48:43] 2025-10-12 11:21:12,654 | INFO     | errors: (none)
[2025-10-12 13:48:43] 2025-10-12 11:21:12,654 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 13:48:43] 2025-10-12 11:21:12,655 | INFO     | pilot state: finished 
[2025-10-12 13:48:43] 2025-10-12 11:21:12,655 | INFO     | transexitcode: 0
[2025-10-12 13:48:43] 2025-10-12 11:21:12,655 | INFO     | exeerrorcode: 0
[2025-10-12 13:48:43] 2025-10-12 11:21:12,655 | INFO     | exeerrordiag: 
[2025-10-12 13:48:43] 2025-10-12 11:21:12,655 | INFO     | exitcode: 0
[2025-10-12 13:48:43] 2025-10-12 11:21:12,655 | INFO     | exitmsg: OK
[2025-10-12 13:48:43] 2025-10-12 11:21:12,655 | INFO     | cpuconsumptiontime: 39114 s
[2025-10-12 13:48:43] 2025-10-12 11:21:12,655 | INFO     | nevents: 400
[2025-10-12 13:48:43] 2025-10-12 11:21:12,655 | INFO     | neventsw: 0
[2025-10-12 13:48:43] 2025-10-12 11:21:12,655 | INFO     | pid: 2891382
[2025-10-12 13:48:43] 2025-10-12 11:21:12,655 | INFO     | pgrp: 2891382
[2025-10-12 13:48:43] 2025-10-12 11:21:12,655 | INFO     | corecount: 4
[2025-10-12 13:48:43] 2025-10-12 11:21:12,655 | INFO     | event service: False
[2025-10-12 13:48:43] 2025-10-12 11:21:12,655 | INFO     | sizes: {0: 2348641, 1: 2348896, 5: 2349158, 12: 2349214, 10285: 2377964, 10287: 2386984, 10288: 2387168, 10292: 2387426}
[2025-10-12 13:48:43] 2025-10-12 11:21:12,655 | INFO     | --------------------------------------------------
[2025-10-12 13:48:43] 2025-10-12 11:21:12,656 | INFO     | 
[2025-10-12 13:48:43] 2025-10-12 11:21:12,656 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2025-10-12 13:48:43] 2025-10-12 11:21:12,676 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 13:48:43] 2025-10-12 11:21:12,677 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 13:48:43] 2025-10-12 11:21:12,677 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 13:48:43] 2025-10-12 11:21:12,677 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 13:48:43] 2025-10-12 11:21:12,677 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 13:48:43] 2025-10-12 11:21:12,677 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 13:48:43] 2025-10-12 11:21:12,677 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 13:48:43] 2025-10-12 11:21:12,677 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 13:48:43] 2025-10-12 11:21:12,677 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 13:48:43] 2025-10-12 11:21:12,677 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 13:48:43] 2025-10-12 11:21:12,677 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 13:48:43] 2025-10-12 11:21:12,678 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 13:48:43] 2025-10-12 11:21:12,678 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 13:48:43] 2025-10-12 11:21:12,678 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 13:48:43] 2025-10-12 11:21:12,678 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 13:48:43] 2025-10-12 11:21:12,678 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 13:48:43] 2025-10-12 11:21:12,678 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 13:48:43] 2025-10-12 11:21:12,678 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 13:48:43] 2025-10-12 11:21:12,678 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 13:48:43] 2025-10-12 11:21:12,678 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 13:48:43] 2025-10-12 11:21:12,678 | INFO     | job 6838119366 has completed (purged errors)
[2025-10-12 13:48:43] 2025-10-12 11:21:12,678 | INFO     | overall cleanup function is called
[2025-10-12 13:48:43] 2025-10-12 11:21:13,686 | INFO     | --- collectZombieJob: --- 10, [2891382]
[2025-10-12 13:48:43] 2025-10-12 11:21:13,687 | INFO     | zombie collector waiting for pid 2891382
[2025-10-12 13:48:43] 2025-10-12 11:21:13,687 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 13:48:43] 2025-10-12 11:21:13,687 | INFO     | collected zombie processes
[2025-10-12 13:48:43] 2025-10-12 11:21:13,687 | INFO     | will attempt to kill all subprocesses of pid=2891382
[2025-10-12 13:48:43] 2025-10-12 11:21:14,003 | INFO     | process IDs to be killed: [2891382] (in reverse order)
[2025-10-12 13:48:43] 2025-10-12 11:21:14,108 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 13:48:43] 2025-10-12 11:21:14,108 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 13:48:43] 2025-10-12 11:21:14,120 | INFO     | did not find any defunct processes belonging to 2891382
[2025-10-12 13:48:43] 2025-10-12 11:21:14,131 | INFO     | did not find any defunct processes belonging to 2891382
[2025-10-12 13:48:43] 2025-10-12 11:21:14,132 | INFO     | ready for new job
[2025-10-12 13:48:43] 2025-10-12 11:21:14,132 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 13:48:43] 2025-10-12 11:21:14,134 | INFO     | ***************************************
[2025-10-12 13:48:43] 2025-10-12 11:21:14,134 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-12 13:48:43] 2025-10-12 11:21:14,134 | INFO     | ***************************************
[2025-10-12 13:48:43] 2025-10-12 11:21:14,135 | INFO     | 
[2025-10-12 13:48:43] 2025-10-12 11:21:14,138 | INFO     | architecture information:
[2025-10-12 13:48:43] 2025-10-12 11:21:14,139 | INFO     | executing command: cat /etc/os-release
[2025-10-12 13:48:43] 2025-10-12 11:21:14,154 | INFO     | cat /etc/os-release:
[2025-10-12 13:48:43] NAME="CentOS Linux"
[2025-10-12 13:48:43] VERSION="7 (Core)"
[2025-10-12 13:48:43] ID="centos"
[2025-10-12 13:48:43] ID_LIKE="rhel fedora"
[2025-10-12 13:48:43] VERSION_ID="7"
[2025-10-12 13:48:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 13:48:43] ANSI_COLOR="0;31"
[2025-10-12 13:48:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 13:48:43] HOME_URL="https://www.centos.org/"
[2025-10-12 13:48:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 13:48:43] 
[2025-10-12 13:48:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 13:48:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 13:48:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 13:48:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 13:48:43] 
[2025-10-12 13:48:43] 2025-10-12 11:21:14,154 | INFO     | ***************************************
[2025-10-12 13:48:43] 2025-10-12 11:21:14,657 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2025-10-12 13:48:43] 2025-10-12 11:21:14,672 | INFO     | sufficient remaining disk space (694385901568 B)
[2025-10-12 13:48:43] 2025-10-12 11:21:14,673 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 13:48:43] 2025-10-12 11:21:14,673 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 13:48:43] 2025-10-12 11:21:14,673 | INFO     | update_server=False
[2025-10-12 13:48:43] 2025-10-12 11:21:14,673 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 13:48:43] 2025-10-12 11:21:14,673 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 13:48:43] 2025-10-12 11:21:14,733 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 13:48:43] 2025-10-12 11:21:14,836 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:48:43] 2025-10-12 11:21:14,837 | INFO     | aborting loop
[2025-10-12 13:48:43] 2025-10-12 11:21:15,086 | INFO     | all data control threads have been joined
[2025-10-12 13:48:43] 2025-10-12 11:21:15,402 | INFO     | all job control threads have been joined
[2025-10-12 13:48:43] 2025-10-12 11:21:15,471 | INFO     | all payload control threads have been joined
[2025-10-12 13:48:43] 2025-10-12 11:21:15,678 | INFO     | [job] retrieve thread has finished
[2025-10-12 13:48:43] 2025-10-12 11:21:15,742 | INFO     | [data] copytool_in thread has finished
[2025-10-12 13:48:43] 2025-10-12 11:21:15,840 | INFO     | [job] job monitor thread has finished
[2025-10-12 13:48:43] 2025-10-12 11:21:15,917 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 13:48:43] 2025-10-12 11:21:16,054 | INFO     | [job] validate thread has finished
[2025-10-12 13:48:43] 2025-10-12 11:21:16,092 | INFO     | [data] control thread has finished
[2025-10-12 13:48:43] 2025-10-12 11:21:16,111 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 13:48:43] 2025-10-12 11:21:16,354 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 13:48:43] 2025-10-12 11:21:16,408 | INFO     | [job] control thread has finished
[2025-10-12 13:48:43] 2025-10-12 11:21:16,476 | INFO     | [payload] control thread has finished
[2025-10-12 13:48:43] 2025-10-12 11:21:16,608 | INFO     | [payload] validate_post thread has finished
[2025-10-12 13:48:43] 2025-10-12 11:21:16,660 | INFO     | [payload] failed_post thread has finished
[2025-10-12 13:48:43] 2025-10-12 11:21:16,679 | INFO     | [data] copytool_out thread has finished
[2025-10-12 13:48:43] 2025-10-12 11:21:16,708 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 13:48:43] 2025-10-12 11:21:17,668 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:48:43] 2025-10-12 11:21:18,675 | INFO     | [job] queue monitor thread has finished
[2025-10-12 13:48:43] 2025-10-12 11:21:18,739 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 13:48:43] 2025-10-12 11:21:40,974 | INFO     | [monitor] cgroup control has ended
[2025-10-12 13:48:43] 2025-10-12 11:21:41,603 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22769240192832)>', '<ExcThread(monitor, started 22769001527040)>']
[2025-10-12 13:48:43] 2025-10-12 11:21:44,577 | INFO     | PID=2883220 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 13:48:43] 2025-10-12 11:21:44,577 | INFO     | .. there are 6 such processes running
[2025-10-12 13:48:43] 2025-10-12 11:21:44,578 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 13:48:43] 2025-10-12 11:21:44,578 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 13:48:43] 2025-10-12 11:21:44,578 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 13:48:43] 2025-10-12 11:21:44,579 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 13:48:43] 2025-10-12 11:21:44,579 | INFO     | [monitor] control thread has ended
[2025-10-12 13:48:43] 2025-10-12 11:21:46,629 | INFO     | all workflow threads have been joined
[2025-10-12 13:48:43] 2025-10-12 11:21:46,630 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 13:48:43] 2025-10-12 11:21:46,631 | INFO     | traces error code: 0
[2025-10-12 13:48:43] 2025-10-12 11:21:46,631 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 13:48:43] 2025-10-12 11:21:46,763 [wrapper] ==== pilot stdout END ====
[2025-10-12 13:48:43] 2025-10-12 11:21:46,766 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 13:48:43] 2025-10-12 11:21:46,769 [wrapper] pilotpid: 2883220
[2025-10-12 13:48:43] 2025-10-12 11:21:46,771 [wrapper] Pilot exit status: 0
[2025-10-12 13:48:43] 2025-10-12 11:21:46,781 [wrapper] pandaids: 6838119366
[2025-10-12 13:48:43] 2025-10-12 11:21:46,848 [wrapper] cleanup supervisor_pilot 3047890 2883221
[2025-10-12 13:48:43] 2025-10-12 11:21:46,851 [wrapper] Test setup, not cleaning
[2025-10-12 13:48:43] 2025-10-12 11:21:46,853 [wrapper] apfmon messages muted
[2025-10-12 13:48:43] 2025-10-12 11:21:46,856 [wrapper] ==== wrapper stdout END ====
[2025-10-12 13:48:43] 2025-10-12 11:21:46,858 [wrapper] ==== wrapper stderr END ====
[2025-10-12 13:48:43]  *** Error codes and diagnostics ***
[2025-10-12 13:48:43]     "exeErrorCode": 0,
[2025-10-12 13:48:43]     "exeErrorDiag": "",
[2025-10-12 13:48:43]     "pilotErrorCode": 0,
[2025-10-12 13:48:43]     "pilotErrorDiag": "",
[2025-10-12 13:48:43]  *** Listing of results directory ***
[2025-10-12 13:48:43] total 413052
[2025-10-12 13:48:43] -rw-r--r-- 1 boinc boinc    563267 Oct  7 09:02 pilot3.tar.gz
[2025-10-12 13:48:43] -rwx------ 1 boinc boinc     36292 Oct 11 08:38 runpilot2-wrapper.sh
[2025-10-12 13:48:43] -rw-r--r-- 1 boinc boinc      5112 Oct 11 08:38 queuedata.json
[2025-10-12 13:48:43] -rw-r--r-- 1 boinc boinc       100 Oct 12 10:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 13:48:43] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 10:29 run_atlas
[2025-10-12 13:48:43] -rw-r--r-- 1 boinc boinc       105 Oct 12 10:29 job.xml
[2025-10-12 13:48:43] -rw-r--r-- 1 boinc boinc      6634 Oct 12 10:29 init_data.xml
[2025-10-12 13:48:43] -rw-r--r-- 2 boinc boinc 221821588 Oct 12 10:29 EVNT.46676267._002118.pool.root.1
[2025-10-12 13:48:43] -rw-r--r-- 2 boinc boinc     15120 Oct 12 10:29 start_atlas.sh
[2025-10-12 13:48:43] drwxrwx--x 2 boinc boinc      4096 Oct 12 10:29 shared
[2025-10-12 13:48:43] -rw-r--r-- 2 boinc boinc    576706 Oct 12 10:29 input.tar.gz
[2025-10-12 13:48:43] -rw-r--r-- 1 boinc boinc         0 Oct 12 10:29 boinc_lockfile
[2025-10-12 13:48:43] -rw-r--r-- 1 boinc boinc      2550 Oct 12 10:29 pandaJob.out
[2025-10-12 13:48:43] -rw------- 1 boinc boinc    975520 Oct 12 10:29 agis_schedconf.cvmfs.json
[2025-10-12 13:48:43] -rw------- 1 boinc boinc   1560580 Oct 12 10:29 agis_ddmendpoints.agis.ALL.json
[2025-10-12 13:48:43] drwx------ 4 boinc boinc      4096 Oct 12 10:29 pilot3
[2025-10-12 13:48:43] -rw------- 1 boinc boinc 193580313 Oct 12 13:20 HITS.46676269._052716.pool.root.1
[2025-10-12 13:48:43] -rw-r--r-- 1 boinc boinc       528 Oct 12 13:20 boinc_task_state.xml
[2025-10-12 13:48:43] -rw------- 1 boinc boinc      1039 Oct 12 13:21 memory_monitor_summary.json
[2025-10-12 13:48:43] -rw------- 1 boinc boinc    364010 Oct 12 13:21 log.46676269._052716.job.log.tgz.1
[2025-10-12 13:48:43] -rw------- 1 boinc boinc      7837 Oct 12 13:21 heartbeat.json
[2025-10-12 13:48:43] -rw------- 1 boinc boinc        95 Oct 12 13:21 pilot_heartbeat.json
[2025-10-12 13:48:43] -rw------- 1 boinc boinc      4833 Oct 12 13:21 pilotlog.txt
[2025-10-12 13:48:43] -rw------- 1 boinc boinc   1463996 Oct 12 13:21 log.46676269._052716.job.log.1
[2025-10-12 13:48:43] -rw------- 1 boinc boinc       357 Oct 12 13:21 output.list
[2025-10-12 13:48:43] -rw-r--r-- 1 boinc boinc       620 Oct 12 13:21 runtime_log
[2025-10-12 13:48:43] -rw------- 1 boinc boinc   1843200 Oct 12 13:21 result.tar.gz
[2025-10-12 13:48:43] -rw-r--r-- 1 boinc boinc      9070 Oct 12 13:21 runtime_log.err
[2025-10-12 13:48:43] -rw------- 1 boinc boinc       665 Oct 12 13:21 KmmMDmyQiR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmVORMDm5A4FEo.diag
[2025-10-12 13:48:43] -rw-r--r-- 1 boinc boinc        26 Oct 12 13:48 wrapper_checkpoint.txt
[2025-10-12 13:48:43] -rw-r--r-- 1 boinc boinc      8192 Oct 12 13:48 boinc_mmap_file
[2025-10-12 13:48:43] -rw-r--r-- 1 boinc boinc     20682 Oct 12 13:48 stderr.txt
[2025-10-12 13:48:43] HITS file was successfully produced:
[2025-10-12 13:48:43] -rw------- 1 boinc boinc 193580313 Oct 12 13:20 shared/HITS.pool.root.1
[2025-10-12 13:48:43]  *** Contents of shared directory: ***
[2025-10-12 13:48:43] total 408056
[2025-10-12 13:48:43] -rw-r--r-- 2 boinc boinc 221821588 Oct 12 10:29 ATLAS.root_0
[2025-10-12 13:48:43] -rw-r--r-- 2 boinc boinc     15120 Oct 12 10:29 start_atlas.sh
[2025-10-12 13:48:43] -rw-r--r-- 2 boinc boinc    576706 Oct 12 10:29 input.tar.gz
[2025-10-12 13:48:43] -rw------- 1 boinc boinc 193580313 Oct 12 13:20 HITS.pool.root.1
[2025-10-12 13:48:43] -rw------- 1 boinc boinc   1843200 Oct 12 13:21 result.tar.gz
13:48:45 (2879125): run_atlas exited; CPU time 39503.218152
13:48:45 (2879125): called boinc_finish(0)

</stderr_txt>
]]>

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