Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
23:04:17 (2011256): wrapper (7.7.26015): starting
23:04:17 (2011256): wrapper: running run_atlas (--nthreads 2)
[2025-10-11 23:04:17] Arguments: --nthreads 2
[2025-10-11 23:04:17] Threads: 2
[2025-10-11 23:04:17] Checking for CVMFS
[2025-10-11 23:04:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 23:04:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 23:04:18] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 23:04:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 23:04:18] 2.9.2.0 1267943 3230 58760 151595 1 57 31359679 36864001 0 130560 0 1963857 99.988 109031 1113 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-11 23:04:18] CVMFS is ok
[2025-10-11 23:04:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 23:04:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 23:04:18] Further information can be found at the LHC@home message board.
[2025-10-11 23:04:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 23:04:18] Checking for apptainer binary...
[2025-10-11 23:04:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 23:04:18] Running /usr/bin/apptainer --version
[2025-10-11 23:04:18] apptainer version 1.4.1-1.1
[2025-10-11 23:04:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 23:04:18] thA334a
[2025-10-11 23:04:18] apptainer works
[2025-10-11 23:04:18] Set ATHENA_PROC_NUMBER=2
[2025-10-11 23:04:18] Set ATHENA_CORE_NUMBER=2
[2025-10-11 23:04:18] Starting ATLAS job with PandaID=6838118431
[2025-10-11 23:04:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 01:09:46]  *** The last 200 lines of the pilot log: ***
[2025-10-12 01:09:46] 2025-10-11 23:09:21,234 | INFO     | zombie collector waiting for pid 2021370
[2025-10-12 01:09:46] 2025-10-11 23:09:21,234 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 01:09:46] 2025-10-11 23:09:21,235 | INFO     | collected zombie processes
[2025-10-12 01:09:46] 2025-10-11 23:09:21,235 | INFO     | will attempt to kill all subprocesses of pid=2021370
[2025-10-12 01:09:46] 2025-10-11 23:09:21,266 | INFO     | process IDs to be killed: [2021370] (in reverse order)
[2025-10-12 01:09:46] 2025-10-11 23:09:21,287 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 01:09:46] 2025-10-11 23:09:21,287 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 01:09:46] 2025-10-11 23:09:21,287 | INFO     | did not find any defunct processes belonging to 2021370
[2025-10-12 01:09:46] 2025-10-11 23:09:21,288 | INFO     | did not find any defunct processes belonging to 2021370
[2025-10-12 01:09:46] 2025-10-11 23:09:21,288 | INFO     | ready for new job
[2025-10-12 01:09:46] 2025-10-11 23:09:21,288 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 01:09:46] 2025-10-11 23:09:21,289 | INFO     | ***************************************
[2025-10-12 01:09:46] 2025-10-11 23:09:21,289 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 01:09:46] 2025-10-11 23:09:21,289 | INFO     | ***************************************
[2025-10-12 01:09:46] 2025-10-11 23:09:21,289 | INFO     | 
[2025-10-12 01:09:46] 2025-10-11 23:09:21,289 | INFO     | architecture information:
[2025-10-12 01:09:46] 2025-10-11 23:09:21,289 | INFO     | executing command: cat /etc/os-release
[2025-10-12 01:09:46] 2025-10-11 23:09:21,297 | INFO     | cat /etc/os-release:
[2025-10-12 01:09:46] NAME="CentOS Linux"
[2025-10-12 01:09:46] VERSION="7 (Core)"
[2025-10-12 01:09:46] ID="centos"
[2025-10-12 01:09:46] ID_LIKE="rhel fedora"
[2025-10-12 01:09:46] VERSION_ID="7"
[2025-10-12 01:09:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 01:09:46] ANSI_COLOR="0;31"
[2025-10-12 01:09:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 01:09:46] HOME_URL="https://www.centos.org/"
[2025-10-12 01:09:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 01:09:46] 
[2025-10-12 01:09:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 01:09:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 01:09:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 01:09:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 01:09:46] 
[2025-10-12 01:09:46] 2025-10-11 23:09:21,297 | INFO     | ***************************************
[2025-10-12 01:09:46] 2025-10-11 23:09:21,801 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 01:09:46] 2025-10-11 23:09:21,812 | INFO     | sufficient remaining disk space (492569624576 B)
[2025-10-12 01:09:46] 2025-10-11 23:09:21,812 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 01:09:46] 2025-10-11 23:09:21,812 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 01:09:46] 2025-10-11 23:09:21,812 | INFO     | update_server=False
[2025-10-12 01:09:46] 2025-10-11 23:09:21,812 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 01:09:46] 2025-10-11 23:09:21,812 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 01:09:46] 2025-10-11 23:09:21,812 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-12 01:09:46] 2025-10-11 23:09:21,812 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 01:09:46] 2025-10-11 23:09:21,813 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 01:09:46] 2025-10-11 23:09:21,813 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 01:09:46] 2025-10-11 23:09:21,813 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 01:09:46] 2025-10-11 23:09:21,813 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 01:09:46] 2025-10-11 23:09:21,813 | INFO     | aborting loop
[2025-10-12 01:09:46] 2025-10-11 23:09:21,822 | INFO     | all job control threads have been joined
[2025-10-12 01:09:46] 2025-10-11 23:09:22,110 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 01:09:46] 2025-10-11 23:09:22,281 | INFO     | all data control threads have been joined
[2025-10-12 01:09:46] 2025-10-11 23:09:22,679 | INFO     | all payload control threads have been joined
[2025-10-12 01:09:46] 2025-10-11 23:09:22,818 | INFO     | [job] retrieve thread has finished
[2025-10-12 01:09:46] 2025-10-11 23:09:22,819 | INFO     | [job] job monitor thread has finished
[2025-10-12 01:09:46] 2025-10-11 23:09:22,820 | INFO     | [job] queue monitor thread has finished
[2025-10-12 01:09:46] 2025-10-11 23:09:22,827 | INFO     | [job] control thread has finished
[2025-10-12 01:09:46] 2025-10-11 23:09:23,138 | INFO     | [payload] failed_post thread has finished
[2025-10-12 01:09:46] 2025-10-11 23:09:23,286 | INFO     | [data] control thread has finished
[2025-10-12 01:09:46] 2025-10-11 23:09:23,304 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 01:09:46] 2025-10-11 23:09:23,681 | INFO     | [payload] control thread has finished
[2025-10-12 01:09:46] 2025-10-11 23:09:23,995 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 01:09:46] 2025-10-11 23:09:24,010 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 01:09:46] 2025-10-11 23:09:24,025 | INFO     | [job] validate thread has finished
[2025-10-12 01:09:46] 2025-10-11 23:09:24,116 | INFO     | [data] copytool_out thread has finished
[2025-10-12 01:09:46] 2025-10-11 23:09:24,162 | INFO     | [data] copytool_in thread has finished
[2025-10-12 01:09:46] 2025-10-11 23:09:24,238 | INFO     | [payload] validate_post thread has finished
[2025-10-12 01:09:46] 2025-10-11 23:09:25,816 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 01:09:46] 2025-10-11 23:09:32,639 | INFO     | job.realtimelogging is not enabled
[2025-10-12 01:09:46] 2025-10-11 23:09:33,645 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 01:09:46] 2025-10-11 23:09:40,183 | INFO     | [monitor] cgroup control has ended
[2025-10-12 01:09:46] 2025-10-11 23:09:41,620 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140504708876096)>', '<ExcThread(monitor, started 140504050153216)>']
[2025-10-12 01:09:46] 2025-10-11 23:09:41,914 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 01:09:46] 2025-10-11 23:09:41,915 | INFO     | [monitor] control thread has ended
[2025-10-12 01:09:46] 2025-10-11 23:09:46,646 | INFO     | all workflow threads have been joined
[2025-10-12 01:09:46] 2025-10-11 23:09:46,647 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 01:09:46] 2025-10-11 23:09:46,647 | INFO     | traces error code: 0
[2025-10-12 01:09:46] 2025-10-11 23:09:46,647 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 01:09:46] 2025-10-11 23:09:46,687 [wrapper] ==== pilot stdout END ====
[2025-10-12 01:09:46] 2025-10-11 23:09:46,690 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 01:09:46] 2025-10-11 23:09:46,692 [wrapper] pilotpid: 2014961
[2025-10-12 01:09:46] 2025-10-11 23:09:46,694 [wrapper] Pilot exit status: 0
[2025-10-12 01:09:46] 2025-10-11 23:09:46,700 [wrapper] pandaids: 6838118431
[2025-10-12 01:09:46] 2025-10-11 23:09:46,711 [wrapper] cleanup supervisor_pilot 2035779 2014962
[2025-10-12 01:09:46] 2025-10-11 23:09:46,714 [wrapper] Test setup, not cleaning
[2025-10-12 01:09:46] 2025-10-11 23:09:46,716 [wrapper] apfmon messages muted
[2025-10-12 01:09:46] 2025-10-11 23:09:46,718 [wrapper] ==== wrapper stdout END ====
[2025-10-12 01:09:46] 2025-10-11 23:09:46,720 [wrapper] ==== wrapper stderr END ====
[2025-10-12 01:09:46]  *** Error codes and diagnostics ***
[2025-10-12 01:09:46]     "exeErrorCode": 0,
[2025-10-12 01:09:46]     "exeErrorDiag": "",
[2025-10-12 01:09:46]     "pilotErrorCode": 0,
[2025-10-12 01:09:46]     "pilotErrorDiag": "",
[2025-10-12 01:09:46]  *** Listing of results directory ***
[2025-10-12 01:09:46] total 413808
[2025-10-12 01:09:46] -rw-r--r-- 1 boinc boinc    557409 Oct 11 07:36 pilot3.tar.gz
[2025-10-12 01:09:46] -rwx------ 1 boinc boinc     36292 Oct 11 07:57 runpilot2-wrapper.sh
[2025-10-12 01:09:46] -rw-r--r-- 1 boinc boinc      5112 Oct 11 07:57 queuedata.json
[2025-10-12 01:09:46] -rw-r--r-- 1 boinc boinc       100 Oct 11 23:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 01:09:46] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 23:04 run_atlas
[2025-10-12 01:09:46] -rw-r--r-- 1 boinc boinc       105 Oct 11 23:04 job.xml
[2025-10-12 01:09:46] -rw-r--r-- 2 boinc boinc 224519104 Oct 11 23:04 EVNT.46676267._002103.pool.root.1
[2025-10-12 01:09:46] -rw-r--r-- 2 boinc boinc    569677 Oct 11 23:04 input.tar.gz
[2025-10-12 01:09:46] -rw-r--r-- 2 boinc boinc     15120 Oct 11 23:04 start_atlas.sh
[2025-10-12 01:09:46] drwxrwx--x 2 boinc boinc      4096 Oct 11 23:04 shared
[2025-10-12 01:09:46] -rw-r--r-- 1 boinc boinc         0 Oct 11 23:04 boinc_setup_complete
[2025-10-12 01:09:46] -rw-r--r-- 1 boinc boinc      6207 Oct 11 23:04 init_data.xml
[2025-10-12 01:09:46] -rw-r--r-- 1 boinc boinc         0 Oct 11 23:04 boinc_lockfile
[2025-10-12 01:09:46] -rw-r--r-- 1 boinc boinc      2548 Oct 11 23:04 pandaJob.out
[2025-10-12 01:09:46] -rw------- 1 boinc boinc    975528 Oct 11 23:04 agis_schedconf.cvmfs.json
[2025-10-12 01:09:46] -rw------- 1 boinc boinc   1560580 Oct 11 23:04 agis_ddmendpoints.agis.ALL.json
[2025-10-12 01:09:46] drwx------ 5 boinc boinc      4096 Oct 11 23:04 pilot3
[2025-10-12 01:09:46] -rw-r--r-- 1 boinc boinc       529 Oct 12 01:08 boinc_task_state.xml
[2025-10-12 01:09:46] -rw------- 1 boinc boinc 192636757 Oct 12 01:08 HITS.46676269._052318.pool.root.1
[2025-10-12 01:09:46] -rw------- 1 boinc boinc        95 Oct 12 01:09 pilot_heartbeat.json
[2025-10-12 01:09:46] -rw------- 1 boinc boinc      1015 Oct 12 01:09 memory_monitor_summary.json
[2025-10-12 01:09:46] -rw------- 1 boinc boinc    259886 Oct 12 01:09 log.46676269._052318.job.log.tgz.1
[2025-10-12 01:09:46] -rw------- 1 boinc boinc      7751 Oct 12 01:09 heartbeat.json
[2025-10-12 01:09:46] -rw-r--r-- 1 boinc boinc      8192 Oct 12 01:09 boinc_mmap_file
[2025-10-12 01:09:46] -rw-r--r-- 1 boinc boinc        27 Oct 12 01:09 wrapper_checkpoint.txt
[2025-10-12 01:09:46] -rw------- 1 boinc boinc      4628 Oct 12 01:09 pilotlog.txt
[2025-10-12 01:09:46] -rw------- 1 boinc boinc   1081348 Oct 12 01:09 log.46676269._052318.job.log.1
[2025-10-12 01:09:46] -rw------- 1 boinc boinc       357 Oct 12 01:09 output.list
[2025-10-12 01:09:46] -rw-r--r-- 1 boinc boinc       620 Oct 12 01:09 runtime_log
[2025-10-12 01:09:46] -rw------- 1 boinc boinc   1361920 Oct 12 01:09 result.tar.gz
[2025-10-12 01:09:46] -rw------- 1 boinc boinc       660 Oct 12 01:09 rypNDmumhR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmgLRMDm1ofiIo.diag
[2025-10-12 01:09:46] -rw-r--r-- 1 boinc boinc      8782 Oct 12 01:09 runtime_log.err
[2025-10-12 01:09:46] -rw-r--r-- 1 boinc boinc     10532 Oct 12 01:09 stderr.txt
[2025-10-12 01:09:46] HITS file was successfully produced:
[2025-10-12 01:09:46] -rw------- 1 boinc boinc 192636757 Oct 12 01:08 shared/HITS.pool.root.1
[2025-10-12 01:09:46]  *** Contents of shared directory: ***
[2025-10-12 01:09:46] total 409300
[2025-10-12 01:09:46] -rw-r--r-- 2 boinc boinc 224519104 Oct 11 23:04 ATLAS.root_0
[2025-10-12 01:09:46] -rw-r--r-- 2 boinc boinc    569677 Oct 11 23:04 input.tar.gz
[2025-10-12 01:09:46] -rw-r--r-- 2 boinc boinc     15120 Oct 11 23:04 start_atlas.sh
[2025-10-12 01:09:46] -rw------- 1 boinc boinc 192636757 Oct 12 01:08 HITS.pool.root.1
[2025-10-12 01:09:46] -rw------- 1 boinc boinc   1361920 Oct 12 01:09 result.tar.gz
01:09:47 (2011256): run_atlas exited; CPU time 14573.624690
01:09:47 (2011256): called boinc_finish(0)

</stderr_txt>
]]>

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