Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:40:03 (8609): wrapper (7.7.26015): starting
07:40:03 (8609): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 07:40:03] Arguments: --nthreads 8
[2025-10-11 07:40:03] Threads: 8
[2025-10-11 07:40:03] Checking for CVMFS
[2025-10-11 07:40:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 07:40:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 07:40:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 07:40:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 07:40:04] 2.11.2.0 2827 221393 89688 151583 1 57 13302152 20275201 1 130560 1 77588644 99.978 13276203 12161 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 07:40:04] CVMFS is ok
[2025-10-11 07:40:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 07:40:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 07:40:04] Further information can be found at the LHC@home message board.
[2025-10-11 07:40:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 07:40:04] Checking for apptainer binary...
[2025-10-11 07:40:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 07:40:04] Running /usr/bin/apptainer --version
[2025-10-11 07:40:04] apptainer version 1.3.2-1.el7
[2025-10-11 07:40:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 07:40:06] c-115-13.aglt2.org
[2025-10-11 07:40:06] apptainer works
[2025-10-11 07:40:06] Set ATHENA_PROC_NUMBER=8
[2025-10-11 07:40:06] Set ATHENA_CORE_NUMBER=8
[2025-10-11 07:40:06] Starting ATLAS job with PandaID=6838119447
[2025-10-11 07:40:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 09:35:40]  *** The last 200 lines of the pilot log: ***
[2025-10-11 09:35:40] 2025-10-11 13:34:41,894 | INFO     | number of running child processes to parent process 18812: 1
[2025-10-11 09:35:40] 2025-10-11 13:34:41,894 | INFO     | maximum number of monitored processes: 6
[2025-10-11 09:35:40] 2025-10-11 13:34:42,148 | INFO     | time since job start (6859s) is within the limit (172800.0s)
[2025-10-11 09:35:40] 2025-10-11 13:34:42,862 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-11 09:35:40] 2025-10-11 13:34:42,866 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-10-11 09:35:40] 2025-10-11 13:34:42,868 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838119447/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 09:35:40] 2025-10-11 13:34:42,868 | INFO     | extracted standard info from prmon json
[2025-10-11 09:35:40] 2025-10-11 13:34:42,869 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 09:35:40] 2025-10-11 13:34:42,869 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 09:35:40] 2025-10-11 13:34:42,869 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 09:35:40] 2025-10-11 13:34:42,869 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 09:35:40] 2025-10-11 13:34:42,872 | INFO     | fitting pss+swap vs Time
[2025-10-11 09:35:40] 2025-10-11 13:34:42,872 | INFO     | sum of square deviations: 435610028.0
[2025-10-11 09:35:40] 2025-10-11 13:34:42,873 | INFO     | sum of deviations: -307086840.50000024
[2025-10-11 09:35:40] 2025-10-11 13:34:42,873 | INFO     | mean x: 1760186238.5
[2025-10-11 09:35:40] 2025-10-11 13:34:42,873 | INFO     | mean y: 2531347.4553571427
[2025-10-11 09:35:40] 2025-10-11 13:34:42,873 | INFO     | -- intersect: 1243388986.004819
[2025-10-11 09:35:40] 2025-10-11 13:34:42,873 | INFO     | intersect: 1243388986.004819
[2025-10-11 09:35:40] 2025-10-11 13:34:42,874 | INFO     | chi2: 1.540110495630274
[2025-10-11 09:35:40] 2025-10-11 13:34:42,874 | INFO     | sum of square deviations: 379832238.0
[2025-10-11 09:35:40] 2025-10-11 13:34:42,875 | INFO     | sum of deviations: 70868396.99999759
[2025-10-11 09:35:40] 2025-10-11 13:34:42,875 | INFO     | mean x: 1760186086.0
[2025-10-11 09:35:40] 2025-10-11 13:34:42,875 | INFO     | mean y: 2532381.6822429905
[2025-10-11 09:35:40] 2025-10-11 13:34:42,875 | INFO     | -- intersect: -325879885.25261337
[2025-10-11 09:35:40] 2025-10-11 13:34:42,875 | INFO     | intersect: -325879885.25261337
[2025-10-11 09:35:40] 2025-10-11 13:34:42,875 | INFO     | chi2: 1.5418655893577355
[2025-10-11 09:35:40] 2025-10-11 13:34:42,876 | INFO     | current chi2=1.5418655893577355 (change=-0.11395894855864008 %)
[2025-10-11 09:35:40] 2025-10-11 13:34:42,876 | INFO     | right removable region: 106
[2025-10-11 09:35:40] 2025-10-11 13:34:42,876 | INFO     | sum of square deviations: 379832238.0
[2025-10-11 09:35:40] 2025-10-11 13:34:42,877 | INFO     | sum of deviations: -16395587320.0
[2025-10-11 09:35:40] 2025-10-11 13:34:42,877 | INFO     | mean x: 1760186391.0
[2025-10-11 09:35:40] 2025-10-11 13:34:42,877 | INFO     | mean y: 2574404.1588785048
[2025-10-11 09:35:40] 2025-10-11 13:34:42,877 | INFO     | -- intersect: 75981616691.54935
[2025-10-11 09:35:40] 2025-10-11 13:34:42,877 | INFO     | intersect: 75981616691.54935
[2025-10-11 09:35:40] 2025-10-11 13:34:42,877 | INFO     | chi2: 0.11536067056226383
[2025-10-11 09:35:40] 2025-10-11 13:34:42,878 | INFO     | current chi2=0.11536067056226383 (change=92.50958480644249 %)
[2025-10-11 09:35:40] 2025-10-11 13:34:42,878 | INFO     | sum of square deviations: 329031285.5
[2025-10-11 09:35:40] 2025-10-11 13:34:42,878 | INFO     | sum of deviations: -14922480508.000004
[2025-10-11 09:35:40] 2025-10-11 13:34:42,879 | INFO     | mean x: 1760186543.5
[2025-10-11 09:35:40] 2025-10-11 13:34:42,879 | INFO     | mean y: 2569852.9607843137
[2025-10-11 09:35:40] 2025-10-11 13:34:42,879 | INFO     | -- intersect: 79831906889.73521
[2025-10-11 09:35:40] 2025-10-11 13:34:42,879 | INFO     | intersect: 79831906889.73521
[2025-10-11 09:35:40] 2025-10-11 13:34:42,879 | INFO     | chi2: 0.10325606050343156
[2025-10-11 09:35:40] 2025-10-11 13:34:42,879 | INFO     | current chi2=0.10325606050343156 (change=10.492839543871263 %)
[2025-10-11 09:35:40] 2025-10-11 13:34:42,879 | INFO     | left removable region: 20
[2025-10-11 09:35:40] 2025-10-11 13:34:42,880 | INFO     | sum of square deviations: 197203697.5
[2025-10-11 09:35:40] 2025-10-11 13:34:42,880 | INFO     | sum of deviations: -7979453066.000001
[2025-10-11 09:35:40] 2025-10-11 13:34:42,880 | INFO     | mean x: 1760186665.5
[2025-10-11 09:35:40] 2025-10-11 13:34:42,880 | INFO     | mean y: 2550491.3255813955
[2025-10-11 09:35:40] 2025-10-11 13:34:42,880 | INFO     | -- intersect: 71224982234.80896
[2025-10-11 09:35:40] 2025-10-11 13:34:42,880 | INFO     | intersect: 71224982234.80896
[2025-10-11 09:35:40] 2025-10-11 13:34:42,881 | INFO     | chi2: 0.08736967381705667
[2025-10-11 09:35:40] 2025-10-11 13:34:42,881 | INFO     | -- intersect: 71224982234.80896
[2025-10-11 09:35:40] 2025-10-11 13:34:42,881 | INFO     | current memory leak: -40.46 B/s (using 86 data points, chi2=0.09)
[2025-10-11 09:35:40] 2025-10-11 13:34:42,881 | INFO     | could have reported an average CPU frequency of 2092 MHz (7 samples)
[2025-10-11 09:35:40] 2025-10-11 13:34:42,881 | INFO     | ..............................
[2025-10-11 09:35:40] 2025-10-11 13:34:42,882 | INFO     | . Timing measurements:
[2025-10-11 09:35:40] 2025-10-11 13:34:42,882 | INFO     | . get job = 0 s
[2025-10-11 09:35:40] 2025-10-11 13:34:42,882 | INFO     | . initial setup = 2 s
[2025-10-11 09:35:40] 2025-10-11 13:34:42,882 | INFO     | . payload setup = 7 s
[2025-10-11 09:35:40] 2025-10-11 13:34:42,882 | INFO     | . stage-in = 0 s
[2025-10-11 09:35:40] 2025-10-11 13:34:42,882 | INFO     | . payload execution = 6824 s
[2025-10-11 09:35:40] 2025-10-11 13:34:42,882 | INFO     | . stage-out = 0 s
[2025-10-11 09:35:40] 2025-10-11 13:34:42,882 | INFO     | . log creation = 0 s
[2025-10-11 09:35:40] 2025-10-11 13:34:42,882 | INFO     | ..............................
[2025-10-11 09:35:40] 2025-10-11 13:34:43,146 | INFO     | 
[2025-10-11 09:35:40] 2025-10-11 13:34:43,147 | INFO     | job summary report
[2025-10-11 09:35:40] 2025-10-11 13:34:43,147 | INFO     | --------------------------------------------------
[2025-10-11 09:35:40] 2025-10-11 13:34:43,148 | INFO     | PanDA job id: 6838119447
[2025-10-11 09:35:40] 2025-10-11 13:34:43,148 | INFO     | task id: 46676269
[2025-10-11 09:35:40] 2025-10-11 13:34:43,148 | INFO     | errors: (none)
[2025-10-11 09:35:40] 2025-10-11 13:34:43,148 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 09:35:40] 2025-10-11 13:34:43,148 | INFO     | pilot state: finished 
[2025-10-11 09:35:40] 2025-10-11 13:34:43,149 | INFO     | transexitcode: 0
[2025-10-11 09:35:40] 2025-10-11 13:34:43,149 | INFO     | exeerrorcode: 0
[2025-10-11 09:35:40] 2025-10-11 13:34:43,149 | INFO     | exeerrordiag: 
[2025-10-11 09:35:40] 2025-10-11 13:34:43,149 | INFO     | exitcode: 0
[2025-10-11 09:35:40] 2025-10-11 13:34:43,149 | INFO     | exitmsg: OK
[2025-10-11 09:35:40] 2025-10-11 13:34:43,149 | INFO     | cpuconsumptiontime: 50736 s
[2025-10-11 09:35:40] 2025-10-11 13:34:43,149 | INFO     | nevents: 400
[2025-10-11 09:35:40] 2025-10-11 13:34:43,150 | INFO     | neventsw: 0
[2025-10-11 09:35:40] 2025-10-11 13:34:43,150 | INFO     | pid: 18812
[2025-10-11 09:35:40] 2025-10-11 13:34:43,150 | INFO     | pgrp: 18812
[2025-10-11 09:35:40] 2025-10-11 13:34:43,150 | INFO     | corecount: 8
[2025-10-11 09:35:40] 2025-10-11 13:34:43,150 | INFO     | event service: False
[2025-10-11 09:35:40] 2025-10-11 13:34:43,150 | INFO     | sizes: {0: 2348857, 6: 2349119, 11: 2349147, 6836: 2376317, 6837: 2385371, 6843: 2385509}
[2025-10-11 09:35:40] 2025-10-11 13:34:43,151 | INFO     | --------------------------------------------------
[2025-10-11 09:35:40] 2025-10-11 13:34:43,151 | INFO     | 
[2025-10-11 09:35:40] 2025-10-11 13:34:43,151 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 09:35:40] 2025-10-11 13:34:43,181 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 09:35:40] 2025-10-11 13:34:43,181 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 09:35:40] 2025-10-11 13:34:43,181 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 09:35:40] 2025-10-11 13:34:43,181 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 09:35:40] 2025-10-11 13:34:43,182 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 09:35:40] 2025-10-11 13:34:43,182 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 09:35:40] 2025-10-11 13:34:43,182 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 09:35:40] 2025-10-11 13:34:43,182 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 09:35:40] 2025-10-11 13:34:43,182 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 09:35:40] 2025-10-11 13:34:43,183 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 09:35:40] 2025-10-11 13:34:43,183 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 09:35:40] 2025-10-11 13:34:43,183 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 09:35:40] 2025-10-11 13:34:43,183 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 09:35:40] 2025-10-11 13:34:43,183 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 09:35:40] 2025-10-11 13:34:43,184 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 09:35:40] 2025-10-11 13:34:43,184 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 09:35:40] 2025-10-11 13:34:43,184 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 09:35:40] 2025-10-11 13:34:43,184 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 09:35:40] 2025-10-11 13:34:43,184 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 09:35:40] 2025-10-11 13:34:43,185 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 09:35:40] 2025-10-11 13:34:43,185 | INFO     | job 6838119447 has completed (purged errors)
[2025-10-11 09:35:40] 2025-10-11 13:34:43,185 | INFO     | overall cleanup function is called
[2025-10-11 09:35:40] 2025-10-11 13:34:44,193 | INFO     | --- collectZombieJob: --- 10, [18812]
[2025-10-11 09:35:40] 2025-10-11 13:34:44,193 | INFO     | zombie collector waiting for pid 18812
[2025-10-11 09:35:40] 2025-10-11 13:34:44,194 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 09:35:40] 2025-10-11 13:34:44,194 | INFO     | collected zombie processes
[2025-10-11 09:35:40] 2025-10-11 13:34:44,194 | INFO     | will attempt to kill all subprocesses of pid=18812
[2025-10-11 09:35:40] 2025-10-11 13:34:44,279 | INFO     | process IDs to be killed: [18812] (in reverse order)
[2025-10-11 09:35:40] 2025-10-11 13:34:44,336 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 09:35:40] 2025-10-11 13:34:44,336 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 09:35:40] 2025-10-11 13:34:44,340 | INFO     | did not find any defunct processes belonging to 18812
[2025-10-11 09:35:40] 2025-10-11 13:34:44,344 | INFO     | did not find any defunct processes belonging to 18812
[2025-10-11 09:35:40] 2025-10-11 13:34:44,344 | INFO     | ready for new job
[2025-10-11 09:35:40] 2025-10-11 13:34:44,344 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 09:35:40] 2025-10-11 13:34:44,346 | INFO     | ***************************************
[2025-10-11 09:35:40] 2025-10-11 13:34:44,346 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 09:35:40] 2025-10-11 13:34:44,347 | INFO     | ***************************************
[2025-10-11 09:35:40] 2025-10-11 13:34:44,347 | INFO     | 
[2025-10-11 09:35:40] 2025-10-11 13:34:44,347 | INFO     | architecture information:
[2025-10-11 09:35:40] 2025-10-11 13:34:44,348 | INFO     | executing command: cat /etc/os-release
[2025-10-11 09:35:40] 2025-10-11 13:34:44,367 | INFO     | cat /etc/os-release:
[2025-10-11 09:35:40] NAME="CentOS Linux"
[2025-10-11 09:35:40] VERSION="7 (Core)"
[2025-10-11 09:35:40] ID="centos"
[2025-10-11 09:35:40] ID_LIKE="rhel fedora"
[2025-10-11 09:35:40] VERSION_ID="7"
[2025-10-11 09:35:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 09:35:40] ANSI_COLOR="0;31"
[2025-10-11 09:35:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 09:35:40] HOME_URL="https://www.centos.org/"
[2025-10-11 09:35:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 09:35:40] 
[2025-10-11 09:35:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 09:35:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 09:35:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 09:35:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 09:35:40] 
[2025-10-11 09:35:40] 2025-10-11 13:34:44,367 | INFO     | ***************************************
[2025-10-11 09:35:40] 2025-10-11 13:34:44,870 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 09:35:40] 2025-10-11 13:34:44,890 | INFO     | sufficient remaining disk space (18591252480 B)
[2025-10-11 09:35:40] 2025-10-11 13:34:44,891 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 09:35:40] 2025-10-11 13:34:44,891 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 09:35:40] 2025-10-11 13:34:44,891 | INFO     | update_server=False
[2025-10-11 09:35:40] 2025-10-11 13:34:44,892 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 09:35:40] 2025-10-11 13:34:44,892 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 09:35:40] 2025-10-11 13:34:45,207 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 09:35:40] 2025-10-11 13:34:45,408 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 09:35:40] 2025-10-11 13:34:45,408 | INFO     | aborting loop
[2025-10-11 09:35:40] 2025-10-11 13:34:45,762 | INFO     | all payload control threads have been joined
[2025-10-11 09:35:40] 2025-10-11 13:34:45,896 | INFO     | all data control threads have been joined
[2025-10-11 09:35:40] 2025-10-11 13:34:45,897 | INFO     | [job] queue monitor thread has finished
[2025-10-11 09:35:40] 2025-10-11 13:34:45,897 | INFO     | [job] retrieve thread has finished
[2025-10-11 09:35:40] 2025-10-11 13:34:45,915 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 09:35:40] 2025-10-11 13:34:46,024 | INFO     | [job] validate thread has finished
[2025-10-11 09:35:40] 2025-10-11 13:34:46,141 | INFO     | [payload] failed_post thread has finished
[2025-10-11 09:35:40] 2025-10-11 13:34:46,156 | INFO     | [data] copytool_in thread has finished
[2025-10-11 09:35:40] 2025-10-11 13:34:46,219 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 09:35:40] 2025-10-11 13:34:46,220 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 09:35:40] 2025-10-11 13:34:46,414 | INFO     | [job] job monitor thread has finished
[2025-10-11 09:35:40] 2025-10-11 13:34:46,459 | INFO     | all job control threads have been joined
[2025-10-11 09:35:40] 2025-10-11 13:34:46,747 | INFO     | [payload] validate_post thread has finished
[2025-10-11 09:35:40] 2025-10-11 13:34:46,768 | INFO     | [payload] control thread has finished
[2025-10-11 09:35:40] 2025-10-11 13:34:46,899 | INFO     | [data] control thread has finished
[2025-10-11 09:35:40] 2025-10-11 13:34:47,213 | INFO     | [data] copytool_out thread has finished
[2025-10-11 09:35:40] 2025-10-11 13:34:47,463 | INFO     | [job] control thread has finished
[2025-10-11 09:35:40] 2025-10-11 13:34:47,788 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 09:35:40] 2025-10-11 13:34:51,795 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 09:35:40] 2025-10-11 13:34:55,488 | INFO     | job.realtimelogging is not enabled
[2025-10-11 09:35:40] 2025-10-11 13:34:56,490 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 09:35:40] 2025-10-11 13:35:15,354 | INFO     | PID=12275 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 09:35:40] 2025-10-11 13:35:15,355 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 09:35:40] 2025-10-11 13:35:15,355 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 09:35:40] 2025-10-11 13:35:15,355 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 09:35:40] 2025-10-11 13:35:34,005 | INFO     | [monitor] cgroup control has ended
[2025-10-11 09:35:40] 2025-10-11 13:35:34,708 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139633074677568)>', '<ExcThread(monitor, started 139632230508288)>']
[2025-10-11 09:35:40] 2025-10-11 13:35:35,449 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 09:35:40] 2025-10-11 13:35:35,449 | INFO     | [monitor] control thread has ended
[2025-10-11 09:35:40] 2025-10-11 13:35:39,733 | INFO     | all workflow threads have been joined
[2025-10-11 09:35:40] 2025-10-11 13:35:39,734 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 09:35:40] 2025-10-11 13:35:39,734 | INFO     | traces error code: 0
[2025-10-11 09:35:40] 2025-10-11 13:35:39,734 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 09:35:40] 2025-10-11 13:35:39,839 [wrapper] ==== pilot stdout END ====
[2025-10-11 09:35:40] 2025-10-11 13:35:39,843 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 09:35:40] 2025-10-11 13:35:39,848 [wrapper] pilotpid: 12275
[2025-10-11 09:35:40] 2025-10-11 13:35:39,853 [wrapper] Pilot exit status: 0
[2025-10-11 09:35:40] 2025-10-11 13:35:39,871 [wrapper] pandaids: 6838119447
[2025-10-11 09:35:40] 2025-10-11 13:35:39,918 [wrapper] cleanup supervisor_pilot 29132 12276
[2025-10-11 09:35:40] 2025-10-11 13:35:39,923 [wrapper] Test setup, not cleaning
[2025-10-11 09:35:40] 2025-10-11 13:35:39,928 [wrapper] apfmon messages muted
[2025-10-11 09:35:40] 2025-10-11 13:35:39,932 [wrapper] ==== wrapper stdout END ====
[2025-10-11 09:35:40] 2025-10-11 13:35:39,937 [wrapper] ==== wrapper stderr END ====
[2025-10-11 09:35:40]  *** Error codes and diagnostics ***
[2025-10-11 09:35:40]     "exeErrorCode": 0,
[2025-10-11 09:35:40]     "exeErrorDiag": "",
[2025-10-11 09:35:40]     "pilotErrorCode": 0,
[2025-10-11 09:35:40]     "pilotErrorDiag": "",
[2025-10-11 09:35:40]  *** Listing of results directory ***
[2025-10-11 09:35:40] total 409920
[2025-10-11 09:35:40] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 02:35 pilot3.tar.gz
[2025-10-11 09:35:40] -rwx------ 1 boincer umatlas     36292 Oct 11 02:40 runpilot2-wrapper.sh
[2025-10-11 09:35:40] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 02:40 queuedata.json
[2025-10-11 09:35:40] -rw-r--r-- 1 boincer umatlas       100 Oct 11 07:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 09:35:40] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 07:40 run_atlas
[2025-10-11 09:35:40] -rw-r--r-- 1 boincer umatlas       105 Oct 11 07:40 job.xml
[2025-10-11 09:35:40] -rw-r--r-- 2 boincer umatlas 222026653 Oct 11 07:40 EVNT.46676267._002122.pool.root.1
[2025-10-11 09:35:40] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 07:40 start_atlas.sh
[2025-10-11 09:35:40] drwxrwx--x 2 boincer umatlas      4096 Oct 11 07:40 shared
[2025-10-11 09:35:40] -rw-r--r-- 2 boincer umatlas    569681 Oct 11 07:40 input.tar.gz
[2025-10-11 09:35:40] -rw-r--r-- 1 boincer umatlas         0 Oct 11 07:40 boinc_lockfile
[2025-10-11 09:35:40] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 07:40 pandaJob.out
[2025-10-11 09:35:40] -rw------- 1 boincer umatlas    975509 Oct 11 07:40 agis_schedconf.cvmfs.json
[2025-10-11 09:35:40] -rw------- 1 boincer umatlas   1560580 Oct 11 07:40 agis_ddmendpoints.agis.ALL.json
[2025-10-11 09:35:40] drwx------ 5 boincer umatlas      4096 Oct 11 07:40 pilot3
[2025-10-11 09:35:40] -rw-r--r-- 1 boincer umatlas      5910 Oct 11 09:28 init_data.xml
[2025-10-11 09:35:40] -rw------- 1 boincer umatlas 191186721 Oct 11 09:34 HITS.46676269._052797.pool.root.1
[2025-10-11 09:35:40] -rw-r--r-- 1 boincer umatlas       529 Oct 11 09:34 boinc_task_state.xml
[2025-10-11 09:35:40] -rw------- 1 boincer umatlas      1051 Oct 11 09:34 memory_monitor_summary.json
[2025-10-11 09:35:40] -rw------- 1 boincer umatlas    349274 Oct 11 09:34 log.46676269._052797.job.log.tgz.1
[2025-10-11 09:35:40] -rw------- 1 boincer umatlas      7851 Oct 11 09:34 heartbeat.json
[2025-10-11 09:35:40] -rw-r--r-- 1 boincer umatlas        27 Oct 11 09:35 wrapper_checkpoint.txt
[2025-10-11 09:35:40] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 09:35 boinc_mmap_file
[2025-10-11 09:35:40] -rw------- 1 boincer umatlas        95 Oct 11 09:35 pilot_heartbeat.json
[2025-10-11 09:35:40] -rw------- 1 boincer umatlas      4818 Oct 11 09:35 pilotlog.txt
[2025-10-11 09:35:40] -rw------- 1 boincer umatlas    968901 Oct 11 09:35 log.46676269._052797.job.log.1
[2025-10-11 09:35:40] -rw------- 1 boincer umatlas       357 Oct 11 09:35 output.list
[2025-10-11 09:35:40] -rw-r--r-- 1 boincer umatlas       620 Oct 11 09:35 runtime_log
[2025-10-11 09:35:40] -rw------- 1 boincer umatlas   1341440 Oct 11 09:35 result.tar.gz
[2025-10-11 09:35:40] -rw-r--r-- 1 boincer umatlas      8703 Oct 11 09:35 runtime_log.err
[2025-10-11 09:35:40] -rw------- 1 boincer umatlas       658 Oct 11 09:35 57hKDmtSiR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7cfNDmwKRKGn.diag
[2025-10-11 09:35:40] -rw-r--r-- 1 boincer umatlas     21024 Oct 11 09:35 stderr.txt
[2025-10-11 09:35:40] HITS file was successfully produced:
[2025-10-11 09:35:40] -rw------- 1 boincer umatlas 191186721 Oct 11 09:34 shared/HITS.pool.root.1
[2025-10-11 09:35:40]  *** Contents of shared directory: ***
[2025-10-11 09:35:40] total 405424
[2025-10-11 09:35:40] -rw-r--r-- 2 boincer umatlas 222026653 Oct 11 07:40 ATLAS.root_0
[2025-10-11 09:35:40] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 07:40 start_atlas.sh
[2025-10-11 09:35:40] -rw-r--r-- 2 boincer umatlas    569681 Oct 11 07:40 input.tar.gz
[2025-10-11 09:35:40] -rw------- 1 boincer umatlas 191186721 Oct 11 09:34 HITS.pool.root.1
[2025-10-11 09:35:40] -rw------- 1 boincer umatlas   1341440 Oct 11 09:35 result.tar.gz
09:35:41 (8609): run_atlas exited; CPU time 50715.066461
09:35:41 (8609): called boinc_finish(0)

</stderr_txt>
]]>

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