Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:15:31 (89125): wrapper (7.7.26015): starting
15:15:31 (89125): wrapper: running run_atlas (--nthreads 6)
[2025-10-14 15:15:31] Arguments: --nthreads 6
[2025-10-14 15:15:31] Threads: 6
[2025-10-14 15:15:31] Checking for CVMFS
[2025-10-14 15:15:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-14 15:15:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-14 15:15:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-14 15:15:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-14 15:15:32] 2.13.1.0 3910062 596 62020 151688 2 57 30790133 52428800 922 130560 0 1147167 99.994 26517 121 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-14 15:15:32] CVMFS is ok
[2025-10-14 15:15:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-14 15:15:32] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-14 15:15:32] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-14 15:15:32] Further information can be found at the LHC@home message board.
[2025-10-14 15:15:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 15:15:32] Checking for apptainer binary...
[2025-10-14 15:15:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-14 15:15:32] Running /usr/bin/apptainer --version
[2025-10-14 15:15:32] apptainer version 1.4.1-1.el9
[2025-10-14 15:15:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 15:15:32] Atto003
[2025-10-14 15:15:32] apptainer works
[2025-10-14 15:15:32] Set ATHENA_PROC_NUMBER=6
[2025-10-14 15:15:32] Set ATHENA_CORE_NUMBER=6
[2025-10-14 15:15:32] Starting ATLAS job with PandaID=6838119305
[2025-10-14 15:15:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 16:35:04]  *** The last 200 lines of the pilot log: ***
[2025-10-14 16:35:04]  workdir=None
[2025-10-14 16:35:04] ]
[2025-10-14 16:35:04] 2025-10-14 07:34:18,451 | INFO     | transferring file log.46676269._052693.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6838119305/log.46676269._052693.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-14 16:35:04] 2025-10-14 07:34:18,451 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6838119305/log.46676269._052693.job.log.tgz.1 /var/lib/boinc/slots/0/log.46676269._052693.job
[2025-10-14 16:35:04] 2025-10-14 07:34:18,459 | INFO     | adding to output.list: log.46676269._052693.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3b/8f/log.46676269._052693.job.log.tg
[2025-10-14 16:35:04] 2025-10-14 07:34:18,459 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-14 16:35:04] 2025-10-14 07:34:18,459 | INFO     | summary of transferred files:
[2025-10-14 16:35:04] 2025-10-14 07:34:18,459 | INFO     |  -- lfn=log.46676269._052693.job.log.tgz.1, status_code=0, status=transferred
[2025-10-14 16:35:04] 2025-10-14 07:34:18,459 | INFO     | stage-out finished correctly
[2025-10-14 16:35:04] 2025-10-14 07:34:19,117 | INFO     | time since job start (4719s) is within the limit (172800.0s)
[2025-10-14 16:35:04] 2025-10-14 07:34:20,807 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-14 16:35:04] 2025-10-14 07:34:20,839 | INFO     | job 6838119305 has state=finished
[2025-10-14 16:35:04] 2025-10-14 07:34:20,839 | INFO     | preparing for final server update for job 6838119305 in state='finished'
[2025-10-14 16:35:04] 2025-10-14 07:34:20,840 | INFO     | this job has now completed (state=finished)
[2025-10-14 16:35:04] 2025-10-14 07:34:20,840 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-14 16:35:04] 2025-10-14 07:34:20,840 | INFO     | log transfer has been attempted: DONE
[2025-10-14 16:35:04] 2025-10-14 07:34:20,840 | INFO     | job 6838119305 has finished - writing final server update
[2025-10-14 16:35:04] 2025-10-14 07:34:20,840 | INFO     | total number of processed events: 400 (read)
[2025-10-14 16:35:04] 2025-10-14 07:34:20,841 | INFO     | executing command: lscpu
[2025-10-14 16:35:04] 2025-10-14 07:34:20,850 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-14 16:35:04] 2025-10-14 07:34:21,122 | INFO     | time since job start (4721s) is within the limit (172800.0s)
[2025-10-14 16:35:04] 2025-10-14 07:34:23,128 | INFO     | time since job start (4723s) is within the limit (172800.0s)
[2025-10-14 16:35:04] 2025-10-14 07:34:23,339 | WARNING  | process 99675 can no longer be monitored (due to stat problems) - aborting
[2025-10-14 16:35:04] 2025-10-14 07:34:23,340 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6838119305/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 16:35:04] 2025-10-14 07:34:23,385 | INFO     | number of running child processes to parent process 99675: 1
[2025-10-14 16:35:04] 2025-10-14 07:34:23,385 | INFO     | maximum number of monitored processes: 6
[2025-10-14 16:35:04] 2025-10-14 07:34:25,133 | INFO     | time since job start (4725s) is within the limit (172800.0s)
[2025-10-14 16:35:04] 2025-10-14 07:34:25,888 | INFO     | monitor loop #360: job 0:6838119305 is in state 'finished'
[2025-10-14 16:35:04] 2025-10-14 07:34:25,888 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 16:35:04] 2025-10-14 07:34:27,138 | INFO     | time since job start (4727s) is within the limit (172800.0s)
[2025-10-14 16:35:04] 2025-10-14 07:34:28,390 | INFO     | monitor loop #361: job 0:6838119305 is in state 'finished'
[2025-10-14 16:35:04] 2025-10-14 07:34:28,390 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 16:35:04] 2025-10-14 07:34:29,143 | INFO     | time since job start (4729s) is within the limit (172800.0s)
[2025-10-14 16:35:04] 2025-10-14 07:34:30,893 | INFO     | monitor loop #362: job 0:6838119305 is in state 'finished'
[2025-10-14 16:35:04] 2025-10-14 07:34:30,893 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 16:35:04] 2025-10-14 07:34:31,148 | INFO     | time since job start (4731s) is within the limit (172800.0s)
[2025-10-14 16:35:04] 2025-10-14 07:34:32,673 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-14 16:35:04] 2025-10-14 07:34:32,675 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3900.0603125000002
[2025-10-14 16:35:04] 2025-10-14 07:34:32,677 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6838119305/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 16:35:04] 2025-10-14 07:34:32,677 | INFO     | extracted standard info from prmon json
[2025-10-14 16:35:04] 2025-10-14 07:34:32,677 | INFO     | extracted standard memory fields from prmon json
[2025-10-14 16:35:04] 2025-10-14 07:34:32,678 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 16:35:04] 2025-10-14 07:34:32,678 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 16:35:04] 2025-10-14 07:34:32,678 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 16:35:04] 2025-10-14 07:34:32,679 | INFO     | fitting pss+swap vs Time
[2025-10-14 16:35:04] 2025-10-14 07:34:32,679 | INFO     | sum of square deviations: 110960220.0
[2025-10-14 16:35:04] 2025-10-14 07:34:32,679 | INFO     | sum of deviations: -8283133635.999999
[2025-10-14 16:35:04] 2025-10-14 07:34:32,679 | INFO     | mean x: 1760424997.0
[2025-10-14 16:35:04] 2025-10-14 07:34:32,680 | INFO     | mean y: 2773036.352112676
[2025-10-14 16:35:04] 2025-10-14 07:34:32,680 | INFO     | -- intersect: 131417756769.31422
[2025-10-14 16:35:04] 2025-10-14 07:34:32,680 | INFO     | intersect: 131417756769.31422
[2025-10-14 16:35:04] 2025-10-14 07:34:32,680 | INFO     | chi2: 0.1715213914038326
[2025-10-14 16:35:04] 2025-10-14 07:34:32,680 | INFO     | -- intersect: 131417756769.31422
[2025-10-14 16:35:04] 2025-10-14 07:34:32,680 | INFO     | current memory leak: -74.65 B/s (using 71 data points, chi2=0.17)
[2025-10-14 16:35:04] 2025-10-14 07:34:32,680 | INFO     | could have reported an average CPU frequency of 3783 MHz (6 samples)
[2025-10-14 16:35:04] 2025-10-14 07:34:32,680 | INFO     | ..............................
[2025-10-14 16:35:04] 2025-10-14 07:34:32,680 | INFO     | . Timing measurements:
[2025-10-14 16:35:04] 2025-10-14 07:34:32,680 | INFO     | . get job = 0 s
[2025-10-14 16:35:04] 2025-10-14 07:34:32,681 | INFO     | . initial setup = 4 s
[2025-10-14 16:35:04] 2025-10-14 07:34:32,681 | INFO     | . payload setup = 2 s
[2025-10-14 16:35:04] 2025-10-14 07:34:32,681 | INFO     | . stage-in = 0 s
[2025-10-14 16:35:04] 2025-10-14 07:34:32,681 | INFO     | . payload execution = 4699 s
[2025-10-14 16:35:04] 2025-10-14 07:34:32,681 | INFO     | . stage-out = 0 s
[2025-10-14 16:35:04] 2025-10-14 07:34:32,681 | INFO     | . log creation = 0 s
[2025-10-14 16:35:04] 2025-10-14 07:34:32,681 | INFO     | ..............................
[2025-10-14 16:35:04] 2025-10-14 07:34:32,735 | INFO     | 
[2025-10-14 16:35:04] 2025-10-14 07:34:32,735 | INFO     | job summary report
[2025-10-14 16:35:04] 2025-10-14 07:34:32,735 | INFO     | --------------------------------------------------
[2025-10-14 16:35:04] 2025-10-14 07:34:32,735 | INFO     | PanDA job id: 6838119305
[2025-10-14 16:35:04] 2025-10-14 07:34:32,735 | INFO     | task id: 46676269
[2025-10-14 16:35:04] 2025-10-14 07:34:32,735 | INFO     | errors: (none)
[2025-10-14 16:35:04] 2025-10-14 07:34:32,735 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 16:35:04] 2025-10-14 07:34:32,736 | INFO     | pilot state: finished 
[2025-10-14 16:35:04] 2025-10-14 07:34:32,736 | INFO     | transexitcode: 0
[2025-10-14 16:35:04] 2025-10-14 07:34:32,736 | INFO     | exeerrorcode: 0
[2025-10-14 16:35:04] 2025-10-14 07:34:32,736 | INFO     | exeerrordiag: 
[2025-10-14 16:35:04] 2025-10-14 07:34:32,736 | INFO     | exitcode: 0
[2025-10-14 16:35:04] 2025-10-14 07:34:32,736 | INFO     | exitmsg: OK
[2025-10-14 16:35:04] 2025-10-14 07:34:32,736 | INFO     | cpuconsumptiontime: 25887 s
[2025-10-14 16:35:04] 2025-10-14 07:34:32,736 | INFO     | nevents: 400
[2025-10-14 16:35:04] 2025-10-14 07:34:32,736 | INFO     | neventsw: 0
[2025-10-14 16:35:04] 2025-10-14 07:34:32,736 | INFO     | pid: 99675
[2025-10-14 16:35:04] 2025-10-14 07:34:32,736 | INFO     | pgrp: 99675
[2025-10-14 16:35:04] 2025-10-14 07:34:32,736 | INFO     | corecount: 6
[2025-10-14 16:35:04] 2025-10-14 07:34:32,736 | INFO     | event service: False
[2025-10-14 16:35:04] 2025-10-14 07:34:32,736 | INFO     | sizes: {0: 2348855, 2: 2349117, 11: 2349145, 4705: 2375424, 4706: 2384422, 4708: 2384478, 4720: 2384800}
[2025-10-14 16:35:04] 2025-10-14 07:34:32,736 | INFO     | --------------------------------------------------
[2025-10-14 16:35:04] 2025-10-14 07:34:32,736 | INFO     | 
[2025-10-14 16:35:04] 2025-10-14 07:34:32,736 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-14 16:35:04] 2025-10-14 07:34:32,744 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 16:35:04] 2025-10-14 07:34:32,745 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 16:35:04] 2025-10-14 07:34:32,745 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 16:35:04] 2025-10-14 07:34:32,745 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 16:35:04] 2025-10-14 07:34:32,745 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 16:35:04] 2025-10-14 07:34:32,745 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 16:35:04] 2025-10-14 07:34:32,745 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 16:35:04] 2025-10-14 07:34:32,745 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 16:35:04] 2025-10-14 07:34:32,745 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 16:35:04] 2025-10-14 07:34:32,745 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 16:35:04] 2025-10-14 07:34:32,745 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 16:35:04] 2025-10-14 07:34:32,745 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 16:35:04] 2025-10-14 07:34:32,745 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 16:35:04] 2025-10-14 07:34:32,745 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 16:35:04] 2025-10-14 07:34:32,745 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 16:35:04] 2025-10-14 07:34:32,745 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 16:35:04] 2025-10-14 07:34:32,745 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 16:35:04] 2025-10-14 07:34:32,746 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 16:35:04] 2025-10-14 07:34:32,746 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 16:35:04] 2025-10-14 07:34:32,746 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 16:35:04] 2025-10-14 07:34:32,746 | INFO     | job 6838119305 has completed (purged errors)
[2025-10-14 16:35:04] 2025-10-14 07:34:32,746 | INFO     | overall cleanup function is called
[2025-10-14 16:35:04] 2025-10-14 07:34:33,751 | INFO     | --- collectZombieJob: --- 10, [99675]
[2025-10-14 16:35:04] 2025-10-14 07:34:33,751 | INFO     | zombie collector waiting for pid 99675
[2025-10-14 16:35:04] 2025-10-14 07:34:33,751 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 16:35:04] 2025-10-14 07:34:33,751 | INFO     | collected zombie processes
[2025-10-14 16:35:04] 2025-10-14 07:34:33,751 | INFO     | will attempt to kill all subprocesses of pid=99675
[2025-10-14 16:35:04] 2025-10-14 07:34:33,817 | INFO     | process IDs to be killed: [99675] (in reverse order)
[2025-10-14 16:35:04] 2025-10-14 07:34:33,834 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 16:35:04] 2025-10-14 07:34:33,834 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 16:35:04] 2025-10-14 07:34:33,835 | INFO     | did not find any defunct processes belonging to 99675
[2025-10-14 16:35:04] 2025-10-14 07:34:33,836 | INFO     | did not find any defunct processes belonging to 99675
[2025-10-14 16:35:04] 2025-10-14 07:34:33,836 | INFO     | ready for new job
[2025-10-14 16:35:04] 2025-10-14 07:34:33,837 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 16:35:04] 2025-10-14 07:34:33,837 | INFO     | ***************************************
[2025-10-14 16:35:04] 2025-10-14 07:34:33,837 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 16:35:04] 2025-10-14 07:34:33,837 | INFO     | ***************************************
[2025-10-14 16:35:04] 2025-10-14 07:34:33,837 | INFO     | 
[2025-10-14 16:35:04] 2025-10-14 07:34:33,838 | INFO     | architecture information:
[2025-10-14 16:35:04] 2025-10-14 07:34:33,838 | INFO     | executing command: cat /etc/os-release
[2025-10-14 16:35:04] 2025-10-14 07:34:33,843 | INFO     | cat /etc/os-release:
[2025-10-14 16:35:04] NAME="CentOS Linux"
[2025-10-14 16:35:04] VERSION="7 (Core)"
[2025-10-14 16:35:04] ID="centos"
[2025-10-14 16:35:04] ID_LIKE="rhel fedora"
[2025-10-14 16:35:04] VERSION_ID="7"
[2025-10-14 16:35:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 16:35:04] ANSI_COLOR="0;31"
[2025-10-14 16:35:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 16:35:04] HOME_URL="https://www.centos.org/"
[2025-10-14 16:35:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 16:35:04] 
[2025-10-14 16:35:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 16:35:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 16:35:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 16:35:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 16:35:04] 
[2025-10-14 16:35:04] 2025-10-14 07:34:33,843 | INFO     | ***************************************
[2025-10-14 16:35:04] 2025-10-14 07:34:34,346 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-14 16:35:04] 2025-10-14 07:34:34,353 | INFO     | sufficient remaining disk space (111843213312 B)
[2025-10-14 16:35:04] 2025-10-14 07:34:34,353 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 16:35:04] 2025-10-14 07:34:34,353 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 16:35:04] 2025-10-14 07:34:34,353 | INFO     | update_server=False
[2025-10-14 16:35:04] 2025-10-14 07:34:34,353 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 16:35:04] 2025-10-14 07:34:34,354 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 16:35:04] 2025-10-14 07:34:34,354 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 16:35:04] 2025-10-14 07:34:34,401 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 16:35:04] 2025-10-14 07:34:34,401 | INFO     | aborting loop
[2025-10-14 16:35:04] 2025-10-14 07:34:34,735 | INFO     | all job control threads have been joined
[2025-10-14 16:35:04] 2025-10-14 07:34:35,303 | INFO     | all payload control threads have been joined
[2025-10-14 16:35:04] 2025-10-14 07:34:35,339 | INFO     | all data control threads have been joined
[2025-10-14 16:35:04] 2025-10-14 07:34:35,356 | INFO     | [job] retrieve thread has finished
[2025-10-14 16:35:04] 2025-10-14 07:34:35,358 | INFO     | [job] queue monitor thread has finished
[2025-10-14 16:35:04] 2025-10-14 07:34:35,406 | INFO     | [job] job monitor thread has finished
[2025-10-14 16:35:04] 2025-10-14 07:34:35,701 | INFO     | [data] copytool_in thread has finished
[2025-10-14 16:35:04] 2025-10-14 07:34:35,740 | INFO     | [job] control thread has finished
[2025-10-14 16:35:04] 2025-10-14 07:34:35,806 | INFO     | [payload] failed_post thread has finished
[2025-10-14 16:35:04] 2025-10-14 07:34:35,851 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 16:35:04] 2025-10-14 07:34:35,896 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 16:35:04] 2025-10-14 07:34:36,308 | INFO     | [payload] control thread has finished
[2025-10-14 16:35:04] 2025-10-14 07:34:36,344 | INFO     | [data] control thread has finished
[2025-10-14 16:35:04] 2025-10-14 07:34:36,345 | INFO     | [payload] validate_post thread has finished
[2025-10-14 16:35:04] 2025-10-14 07:34:36,359 | INFO     | [data] copytool_out thread has finished
[2025-10-14 16:35:04] 2025-10-14 07:34:36,607 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 16:35:04] 2025-10-14 07:34:36,622 | INFO     | [job] validate thread has finished
[2025-10-14 16:35:04] 2025-10-14 07:34:36,756 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 16:35:04] 2025-10-14 07:34:36,790 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 16:35:04] 2025-10-14 07:34:39,856 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 16:35:04] 2025-10-14 07:34:46,246 | INFO     | [monitor] cgroup control has ended
[2025-10-14 16:35:04] 2025-10-14 07:34:48,097 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140591250646848)>', '<ExcThread(monitor, started 140590746412800)>']
[2025-10-14 16:35:04] 2025-10-14 07:34:53,122 | INFO     | all workflow threads have been joined
[2025-10-14 16:35:04] 2025-10-14 07:34:53,122 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 16:35:04] 2025-10-14 07:34:53,122 | INFO     | traces error code: 0
[2025-10-14 16:35:04] 2025-10-14 07:34:53,122 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 16:35:04] 2025-10-14 07:35:04,278 | INFO     | PID=92914 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-14 16:35:04] 2025-10-14 07:35:04,278 | INFO     | .. there are 2 such processes running
[2025-10-14 16:35:04] 2025-10-14 07:35:04,278 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 16:35:04] 2025-10-14 07:35:04,278 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 16:35:04] 2025-10-14 07:35:04,278 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 16:35:04] 2025-10-14 07:35:04,278 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 16:35:04] 2025-10-14 07:35:04,278 | INFO     | [monitor] control thread has ended
[2025-10-14 16:35:04] 2025-10-14 07:35:04,321 [wrapper] ==== pilot stdout END ====
[2025-10-14 16:35:04] 2025-10-14 07:35:04,322 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 16:35:04] 2025-10-14 07:35:04,323 [wrapper] pilotpid: 92914
[2025-10-14 16:35:04] 2025-10-14 07:35:04,324 [wrapper] Pilot exit status: 0
[2025-10-14 16:35:04] 2025-10-14 07:35:04,328 [wrapper] pandaids: 6838119305
[2025-10-14 16:35:04] 2025-10-14 07:35:04,339 [wrapper] cleanup supervisor_pilot  137613 92915
[2025-10-14 16:35:04] 2025-10-14 07:35:04,340 [wrapper] Test setup, not cleaning
[2025-10-14 16:35:04] 2025-10-14 07:35:04,341 [wrapper] apfmon messages muted
[2025-10-14 16:35:04] 2025-10-14 07:35:04,342 [wrapper] ==== wrapper stdout END ====
[2025-10-14 16:35:04] 2025-10-14 07:35:04,343 [wrapper] ==== wrapper stderr END ====
[2025-10-14 16:35:04]  *** Error codes and diagnostics ***
[2025-10-14 16:35:04]     "exeErrorCode": 0,
[2025-10-14 16:35:04]     "exeErrorDiag": "",
[2025-10-14 16:35:04]     "pilotErrorCode": 0,
[2025-10-14 16:35:04]     "pilotErrorDiag": "",
[2025-10-14 16:35:04]  *** Listing of results directory ***
[2025-10-14 16:35:04] total 416704
[2025-10-14 16:35:04] -rw-r--r--. 1 boinc boinc    557409 Oct 11 15:35 pilot3.tar.gz
[2025-10-14 16:35:04] -rwx------. 1 boinc boinc     36292 Oct 11 15:38 runpilot2-wrapper.sh
[2025-10-14 16:35:04] -rw-r--r--. 1 boinc boinc      5112 Oct 11 15:38 queuedata.json
[2025-10-14 16:35:04] -rw-r--r--. 1 boinc boinc       100 Oct 14 15:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 16:35:04] -rwxr-xr-x. 1 boinc boinc      7986 Oct 14 15:15 run_atlas
[2025-10-14 16:35:04] -rw-r--r--. 1 boinc boinc       105 Oct 14 15:15 job.xml
[2025-10-14 16:35:04] -rw-r--r--. 2 boinc boinc     15120 Oct 14 15:15 start_atlas.sh
[2025-10-14 16:35:04] drwxrwx--x. 2 boinc boinc        68 Oct 14 15:15 shared
[2025-10-14 16:35:04] -rw-r--r--. 2 boinc boinc    569668 Oct 14 15:15 input.tar.gz
[2025-10-14 16:35:04] -rw-r--r--. 1 boinc boinc      9345 Oct 14 15:15 init_data.xml
[2025-10-14 16:35:04] -rw-r--r--. 2 boinc boinc 221821588 Oct 14 15:15 EVNT.46676267._002118.pool.root.1
[2025-10-14 16:35:04] -rw-r--r--. 1 boinc boinc         0 Oct 14 15:15 boinc_lockfile
[2025-10-14 16:35:04] -rw-r--r--. 1 boinc boinc      2549 Oct 14 15:15 pandaJob.out
[2025-10-14 16:35:04] -rw-------. 1 boinc boinc    972807 Oct 14 15:15 agis_schedconf.cvmfs.json
[2025-10-14 16:35:04] -rw-------. 1 boinc boinc   1560580 Oct 14 15:15 agis_ddmendpoints.agis.ALL.json
[2025-10-14 16:35:04] drwx------. 5 boinc boinc      4096 Oct 14 15:15 pilot3
[2025-10-14 16:35:04] -rw-------. 1 boinc boinc 199028151 Oct 14 16:33 HITS.46676269._052693.pool.root.1
[2025-10-14 16:35:04] -rw-------. 1 boinc boinc        95 Oct 14 16:34 pilot_heartbeat.json
[2025-10-14 16:35:04] -rw-------. 1 boinc boinc      1016 Oct 14 16:34 memory_monitor_summary.json
[2025-10-14 16:35:04] -rw-r--r--. 1 boinc boinc       529 Oct 14 16:34 boinc_task_state.xml
[2025-10-14 16:35:04] -rw-------. 1 boinc boinc    281252 Oct 14 16:34 log.46676269._052693.job.log.tgz.1
[2025-10-14 16:35:04] -rw-------. 1 boinc boinc      7766 Oct 14 16:34 heartbeat.json
[2025-10-14 16:35:04] -rw-r--r--. 1 boinc boinc        27 Oct 14 16:34 wrapper_checkpoint.txt
[2025-10-14 16:35:04] -rw-r--r--. 1 boinc boinc      8192 Oct 14 16:34 boinc_mmap_file
[2025-10-14 16:35:04] -rw-------. 1 boinc boinc       820 Oct 14 16:35 pilotlog.txt
[2025-10-14 16:35:04] -rw-------. 1 boinc boinc    705836 Oct 14 16:35 log.46676269._052693.job.log.1
[2025-10-14 16:35:04] -rw-------. 1 boinc boinc       357 Oct 14 16:35 output.list
[2025-10-14 16:35:04] -rw-r--r--. 1 boinc boinc       620 Oct 14 16:35 runtime_log
[2025-10-14 16:35:04] -rw-------. 1 boinc boinc   1003520 Oct 14 16:35 result.tar.gz
[2025-10-14 16:35:04] -rw-r--r--. 1 boinc boinc      8651 Oct 14 16:35 runtime_log.err
[2025-10-14 16:35:04] -rw-------. 1 boinc boinc       638 Oct 14 16:35 o8dLDmyQiR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm8NRMDmAKx3in.diag
[2025-10-14 16:35:04] -rw-r--r--. 1 boinc boinc     22320 Oct 14 16:35 stderr.txt
[2025-10-14 16:35:04] HITS file was successfully produced:
[2025-10-14 16:35:04] -rw-------. 1 boinc boinc 199028151 Oct 14 16:33 shared/HITS.pool.root.1
[2025-10-14 16:35:04]  *** Contents of shared directory: ***
[2025-10-14 16:35:04] total 412544
[2025-10-14 16:35:04] -rw-r--r--. 2 boinc boinc     15120 Oct 14 15:15 start_atlas.sh
[2025-10-14 16:35:04] -rw-r--r--. 2 boinc boinc    569668 Oct 14 15:15 input.tar.gz
[2025-10-14 16:35:04] -rw-r--r--. 2 boinc boinc 221821588 Oct 14 15:15 ATLAS.root_0
[2025-10-14 16:35:04] -rw-------. 1 boinc boinc 199028151 Oct 14 16:33 HITS.pool.root.1
[2025-10-14 16:35:04] -rw-------. 1 boinc boinc   1003520 Oct 14 16:35 result.tar.gz
16:35:05 (89125): run_atlas exited; CPU time 25937.991278
16:35:05 (89125): called boinc_finish(0)

</stderr_txt>
]]>

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