Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
07:22:26 (1299017): wrapper (7.7.26015): starting
07:22:26 (1299017): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 07:22:26] Arguments: --nthreads 4
[2025-10-11 07:22:26] Threads: 4
[2025-10-11 07:22:26] Checking for CVMFS
[2025-10-11 07:22:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 07:22:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 07:22:26] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 07:22:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 07:22:26] 2.13.2.0 1257088 73 45288 151587 2 56 3183321 4096001 0 130560 0 67015 99.983 5260 1226 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-11 07:22:26] CVMFS is ok
[2025-10-11 07:22:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 07:22:26] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-11 07:22:26] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-11 07:22:26] Further information can be found at the LHC@home message board.
[2025-10-11 07:22:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 07:22:26] Checking for apptainer binary...
[2025-10-11 07:22:26] apptainer is not installed, using version from CVMFS
[2025-10-11 07:22:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 07:22:26] WALKTOTHESUNMINT
[2025-10-11 07:22:26] apptainer works
[2025-10-11 07:22:26] Set ATHENA_PROC_NUMBER=4
[2025-10-11 07:22:26] Set ATHENA_CORE_NUMBER=4
[2025-10-11 07:22:26] Starting ATLAS job with PandaID=6838119304
[2025-10-11 07:22:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 08:36:48]  *** The last 200 lines of the pilot log: ***
[2025-10-11 08:36:48]  is_tar=False
[2025-10-11 08:36:48]  lfn=log.46676269._052692.job.log.tgz.1
[2025-10-11 08:36:48]  mtime=0
[2025-10-11 08:36:48]  protocol_id=None
[2025-10-11 08:36:48]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-11 08:36:48]  replicas=None
[2025-10-11 08:36:48]  scope=mc23_13p6TeV
[2025-10-11 08:36:48]  status=None
[2025-10-11 08:36:48]  status_code=0
[2025-10-11 08:36:48]  storage_token=
[2025-10-11 08:36:48]  surl=/var/lib/boinc/slots/5/PanDA_Pilot-6838119304/log.46676269._052692.job.log.tgz.1
[2025-10-11 08:36:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d2/0b/log.46676269._052692.job.log.tgz.1
[2025-10-11 08:36:48]  workdir=None
[2025-10-11 08:36:48] ]
[2025-10-11 08:36:48] 2025-10-11 15:35:46,262 | INFO     | transferring file log.46676269._052692.job.log.tgz.1 from /var/lib/boinc/slots/5/PanDA_Pilot-6838119304/log.46676269._052692.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-11 08:36:48] 2025-10-11 15:35:46,262 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/5/PanDA_Pilot-6838119304/log.46676269._052692.job.log.tgz.1 /var/lib/boinc/slots/5/log.46676269._052692.job
[2025-10-11 08:36:48] 2025-10-11 15:35:46,269 | INFO     | adding to output.list: log.46676269._052692.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d2/0b/log.46676269._052692.job.log.tg
[2025-10-11 08:36:48] 2025-10-11 15:35:46,270 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 08:36:48] 2025-10-11 15:35:46,270 | INFO     | summary of transferred files:
[2025-10-11 08:36:48] 2025-10-11 15:35:46,270 | INFO     |  -- lfn=log.46676269._052692.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 08:36:48] 2025-10-11 15:35:46,270 | INFO     | stage-out finished correctly
[2025-10-11 08:36:48] 2025-10-11 15:35:47,250 | INFO     | monitor loop #336: job 0:6838119304 is in state 'finished'
[2025-10-11 08:36:48] 2025-10-11 15:35:47,251 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 08:36:48] 2025-10-11 15:35:47,749 | INFO     | time since job start (4391s) is within the limit (172800.0s)
[2025-10-11 08:36:48] 2025-10-11 15:35:48,282 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 08:36:48] 2025-10-11 15:35:48,310 | INFO     | job 6838119304 has state=finished
[2025-10-11 08:36:48] 2025-10-11 15:35:48,310 | INFO     | preparing for final server update for job 6838119304 in state='finished'
[2025-10-11 08:36:48] 2025-10-11 15:35:48,310 | INFO     | this job has now completed (state=finished)
[2025-10-11 08:36:48] 2025-10-11 15:35:48,310 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 08:36:48] 2025-10-11 15:35:48,310 | INFO     | log transfer has been attempted: DONE
[2025-10-11 08:36:48] 2025-10-11 15:35:48,310 | INFO     | job 6838119304 has finished - writing final server update
[2025-10-11 08:36:48] 2025-10-11 15:35:48,310 | INFO     | total number of processed events: 400 (read)
[2025-10-11 08:36:48] 2025-10-11 15:35:48,312 | INFO     | executing command: lscpu
[2025-10-11 08:36:48] 2025-10-11 15:35:48,324 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 08:36:48] 2025-10-11 15:35:49,753 | INFO     | monitor loop #337: job 0:6838119304 is in state 'finished'
[2025-10-11 08:36:48] 2025-10-11 15:35:49,753 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 08:36:48] 2025-10-11 15:35:49,754 | INFO     | time since job start (4393s) is within the limit (172800.0s)
[2025-10-11 08:36:48] 2025-10-11 15:35:50,891 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 08:36:48] 2025-10-11 15:35:50,892 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4646.705875
[2025-10-11 08:36:48] 2025-10-11 15:35:50,894 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6838119304/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 08:36:48] 2025-10-11 15:35:50,894 | INFO     | extracted standard info from prmon json
[2025-10-11 08:36:48] 2025-10-11 15:35:50,894 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 08:36:48] 2025-10-11 15:35:50,894 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 08:36:48] 2025-10-11 15:35:50,894 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 08:36:48] 2025-10-11 15:35:50,894 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 08:36:48] 2025-10-11 15:35:50,895 | INFO     | fitting pss+swap vs Time
[2025-10-11 08:36:48] 2025-10-11 15:35:50,895 | INFO     | sum of square deviations: 85136480.0
[2025-10-11 08:36:48] 2025-10-11 15:35:50,895 | INFO     | sum of deviations: -11005940799.0
[2025-10-11 08:36:48] 2025-10-11 15:35:50,895 | INFO     | mean x: 1760194830.0
[2025-10-11 08:36:48] 2025-10-11 15:35:50,895 | INFO     | mean y: 2649886.3384615383
[2025-10-11 08:36:48] 2025-10-11 15:35:50,895 | INFO     | -- intersect: 227550231060.54102
[2025-10-11 08:36:48] 2025-10-11 15:35:50,895 | INFO     | intersect: 227550231060.54102
[2025-10-11 08:36:48] 2025-10-11 15:35:50,895 | INFO     | chi2: 0.13961549746907814
[2025-10-11 08:36:48] 2025-10-11 15:35:50,895 | INFO     | -- intersect: 227550231060.54102
[2025-10-11 08:36:48] 2025-10-11 15:35:50,895 | INFO     | current memory leak: -129.27 B/s (using 65 data points, chi2=0.14)
[2025-10-11 08:36:48] 2025-10-11 15:35:50,895 | INFO     | could have reported an average CPU frequency of 4617 MHz (6 samples)
[2025-10-11 08:36:48] 2025-10-11 15:35:50,895 | INFO     | ..............................
[2025-10-11 08:36:48] 2025-10-11 15:35:50,895 | INFO     | . Timing measurements:
[2025-10-11 08:36:48] 2025-10-11 15:35:50,895 | INFO     | . get job = 0 s
[2025-10-11 08:36:48] 2025-10-11 15:35:50,895 | INFO     | . initial setup = 6 s
[2025-10-11 08:36:48] 2025-10-11 15:35:50,895 | INFO     | . payload setup = 2 s
[2025-10-11 08:36:48] 2025-10-11 15:35:50,895 | INFO     | . stage-in = 0 s
[2025-10-11 08:36:48] 2025-10-11 15:35:50,895 | INFO     | . payload execution = 4370 s
[2025-10-11 08:36:48] 2025-10-11 15:35:50,895 | INFO     | . stage-out = 0 s
[2025-10-11 08:36:48] 2025-10-11 15:35:50,896 | INFO     | . log creation = 0 s
[2025-10-11 08:36:48] 2025-10-11 15:35:50,896 | INFO     | ..............................
[2025-10-11 08:36:48] 2025-10-11 15:35:50,925 | INFO     | 
[2025-10-11 08:36:48] 2025-10-11 15:35:50,925 | INFO     | job summary report
[2025-10-11 08:36:48] 2025-10-11 15:35:50,925 | INFO     | --------------------------------------------------
[2025-10-11 08:36:48] 2025-10-11 15:35:50,925 | INFO     | PanDA job id: 6838119304
[2025-10-11 08:36:48] 2025-10-11 15:35:50,925 | INFO     | task id: 46676269
[2025-10-11 08:36:48] 2025-10-11 15:35:50,925 | INFO     | errors: (none)
[2025-10-11 08:36:48] 2025-10-11 15:35:50,925 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 08:36:48] 2025-10-11 15:35:50,925 | INFO     | pilot state: finished 
[2025-10-11 08:36:48] 2025-10-11 15:35:50,925 | INFO     | transexitcode: 0
[2025-10-11 08:36:48] 2025-10-11 15:35:50,925 | INFO     | exeerrorcode: 0
[2025-10-11 08:36:48] 2025-10-11 15:35:50,925 | INFO     | exeerrordiag: 
[2025-10-11 08:36:48] 2025-10-11 15:35:50,925 | INFO     | exitcode: 0
[2025-10-11 08:36:48] 2025-10-11 15:35:50,925 | INFO     | exitmsg: OK
[2025-10-11 08:36:48] 2025-10-11 15:35:50,925 | INFO     | cpuconsumptiontime: 16923 s
[2025-10-11 08:36:48] 2025-10-11 15:35:50,925 | INFO     | nevents: 400
[2025-10-11 08:36:48] 2025-10-11 15:35:50,925 | INFO     | neventsw: 0
[2025-10-11 08:36:48] 2025-10-11 15:35:50,925 | INFO     | pid: 1309331
[2025-10-11 08:36:48] 2025-10-11 15:35:50,925 | INFO     | pgrp: 1309331
[2025-10-11 08:36:48] 2025-10-11 15:35:50,925 | INFO     | corecount: 4
[2025-10-11 08:36:48] 2025-10-11 15:35:50,925 | INFO     | event service: False
[2025-10-11 08:36:48] 2025-10-11 15:35:50,925 | INFO     | sizes: {0: 2348851, 1: 2349113, 10: 2349141, 4376: 2375306, 4378: 2384304, 4380: 2384360, 4382: 2384682}
[2025-10-11 08:36:48] 2025-10-11 15:35:50,925 | INFO     | --------------------------------------------------
[2025-10-11 08:36:48] 2025-10-11 15:35:50,925 | INFO     | 
[2025-10-11 08:36:48] 2025-10-11 15:35:50,925 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-10-11 08:36:48] 2025-10-11 15:35:50,936 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 08:36:48] 2025-10-11 15:35:50,937 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 08:36:48] 2025-10-11 15:35:50,937 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 08:36:48] 2025-10-11 15:35:50,937 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 08:36:48] 2025-10-11 15:35:50,937 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 08:36:48] 2025-10-11 15:35:50,937 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 08:36:48] 2025-10-11 15:35:50,937 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 08:36:48] 2025-10-11 15:35:50,937 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 08:36:48] 2025-10-11 15:35:50,937 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 08:36:48] 2025-10-11 15:35:50,937 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 08:36:48] 2025-10-11 15:35:50,937 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 08:36:48] 2025-10-11 15:35:50,937 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 08:36:48] 2025-10-11 15:35:50,937 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 08:36:48] 2025-10-11 15:35:50,937 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 08:36:48] 2025-10-11 15:35:50,937 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 08:36:48] 2025-10-11 15:35:50,937 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 08:36:48] 2025-10-11 15:35:50,937 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 08:36:48] 2025-10-11 15:35:50,937 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 08:36:48] 2025-10-11 15:35:50,937 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 08:36:48] 2025-10-11 15:35:50,937 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 08:36:48] 2025-10-11 15:35:50,937 | INFO     | job 6838119304 has completed (purged errors)
[2025-10-11 08:36:48] 2025-10-11 15:35:50,937 | INFO     | overall cleanup function is called
[2025-10-11 08:36:48] 2025-10-11 15:35:51,943 | INFO     | --- collectZombieJob: --- 10, [1309331]
[2025-10-11 08:36:48] 2025-10-11 15:35:51,943 | INFO     | zombie collector waiting for pid 1309331
[2025-10-11 08:36:48] 2025-10-11 15:35:51,943 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 08:36:48] 2025-10-11 15:35:51,943 | INFO     | collected zombie processes
[2025-10-11 08:36:48] 2025-10-11 15:35:51,943 | INFO     | will attempt to kill all subprocesses of pid=1309331
[2025-10-11 08:36:48] 2025-10-11 15:35:51,996 | INFO     | process IDs to be killed: [1309331] (in reverse order)
[2025-10-11 08:36:48] 2025-10-11 15:35:52,024 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 08:36:48] 2025-10-11 15:35:52,024 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 08:36:48] 2025-10-11 15:35:52,026 | INFO     | did not find any defunct processes belonging to 1309331
[2025-10-11 08:36:48] 2025-10-11 15:35:52,027 | INFO     | did not find any defunct processes belonging to 1309331
[2025-10-11 08:36:48] 2025-10-11 15:35:52,027 | INFO     | ready for new job
[2025-10-11 08:36:48] 2025-10-11 15:35:52,027 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 08:36:48] 2025-10-11 15:35:52,028 | INFO     | ***************************************
[2025-10-11 08:36:48] 2025-10-11 15:35:52,028 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 08:36:48] 2025-10-11 15:35:52,028 | INFO     | ***************************************
[2025-10-11 08:36:48] 2025-10-11 15:35:52,028 | INFO     | 
[2025-10-11 08:36:48] 2025-10-11 15:35:52,028 | INFO     | architecture information:
[2025-10-11 08:36:48] 2025-10-11 15:35:52,029 | INFO     | executing command: cat /etc/os-release
[2025-10-11 08:36:48] 2025-10-11 15:35:52,036 | INFO     | cat /etc/os-release:
[2025-10-11 08:36:48] NAME="CentOS Linux"
[2025-10-11 08:36:48] VERSION="7 (Core)"
[2025-10-11 08:36:48] ID="centos"
[2025-10-11 08:36:48] ID_LIKE="rhel fedora"
[2025-10-11 08:36:48] VERSION_ID="7"
[2025-10-11 08:36:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 08:36:48] ANSI_COLOR="0;31"
[2025-10-11 08:36:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 08:36:48] HOME_URL="https://www.centos.org/"
[2025-10-11 08:36:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 08:36:48] 
[2025-10-11 08:36:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 08:36:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 08:36:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 08:36:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 08:36:48] 
[2025-10-11 08:36:48] 2025-10-11 15:35:52,037 | INFO     | ***************************************
[2025-10-11 08:36:48] 2025-10-11 15:35:52,538 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-10-11 08:36:48] 2025-10-11 15:35:52,549 | INFO     | sufficient remaining disk space (707619979264 B)
[2025-10-11 08:36:48] 2025-10-11 15:35:52,549 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 08:36:48] 2025-10-11 15:35:52,549 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 08:36:48] 2025-10-11 15:35:52,549 | INFO     | update_server=False
[2025-10-11 08:36:48] 2025-10-11 15:35:52,549 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 08:36:48] 2025-10-11 15:35:52,549 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 08:36:48] 2025-10-11 15:35:52,549 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 08:36:48] 2025-10-11 15:35:52,902 | INFO     | all data control threads have been joined
[2025-10-11 08:36:48] 2025-10-11 15:35:53,261 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 08:36:48] 2025-10-11 15:35:53,261 | INFO     | aborting loop
[2025-10-11 08:36:48] 2025-10-11 15:35:53,450 | INFO     | all payload control threads have been joined
[2025-10-11 08:36:48] 2025-10-11 15:35:53,553 | INFO     | [job] retrieve thread has finished
[2025-10-11 08:36:48] 2025-10-11 15:35:53,554 | INFO     | [job] queue monitor thread has finished
[2025-10-11 08:36:48] 2025-10-11 15:35:53,632 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 08:36:48] 2025-10-11 15:35:53,637 | INFO     | [payload] failed_post thread has finished
[2025-10-11 08:36:48] 2025-10-11 15:35:53,790 | INFO     | all job control threads have been joined
[2025-10-11 08:36:48] 2025-10-11 15:35:53,907 | INFO     | [data] control thread has finished
[2025-10-11 08:36:48] 2025-10-11 15:35:54,003 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 08:36:48] 2025-10-11 15:35:54,013 | INFO     | [job] validate thread has finished
[2025-10-11 08:36:48] 2025-10-11 15:35:54,155 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 08:36:48] 2025-10-11 15:35:54,156 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 08:36:48] 2025-10-11 15:35:54,209 | INFO     | [payload] validate_post thread has finished
[2025-10-11 08:36:48] 2025-10-11 15:35:54,256 | INFO     | [data] copytool_in thread has finished
[2025-10-11 08:36:48] 2025-10-11 15:35:54,266 | INFO     | [job] job monitor thread has finished
[2025-10-11 08:36:48] 2025-10-11 15:35:54,314 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 08:36:48] 2025-10-11 15:35:54,455 | INFO     | [payload] control thread has finished
[2025-10-11 08:36:48] 2025-10-11 15:35:54,555 | INFO     | [data] copytool_out thread has finished
[2025-10-11 08:36:48] 2025-10-11 15:35:54,794 | INFO     | [job] control thread has finished
[2025-10-11 08:36:48] 2025-10-11 15:35:58,319 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 08:36:48] 2025-10-11 15:36:22,882 | INFO     | PID=1302793 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 08:36:48] 2025-10-11 15:36:22,883 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 08:36:48] 2025-10-11 15:36:22,883 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 08:36:48] 2025-10-11 15:36:22,883 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 08:36:48] 2025-10-11 15:36:42,777 | INFO     | [monitor] cgroup control has ended
[2025-10-11 08:36:48] 2025-10-11 15:36:43,345 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127815021041472)>', '<ExcThread(monitor, started 127814619600640)>']
[2025-10-11 08:36:48] 2025-10-11 15:36:43,985 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 08:36:48] 2025-10-11 15:36:43,985 | INFO     | [monitor] control thread has ended
[2025-10-11 08:36:48] 2025-10-11 15:36:48,369 | INFO     | all workflow threads have been joined
[2025-10-11 08:36:48] 2025-10-11 15:36:48,369 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 08:36:48] 2025-10-11 15:36:48,369 | INFO     | traces error code: 0
[2025-10-11 08:36:48] 2025-10-11 15:36:48,370 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 08:36:48] 2025-10-11 15:36:48,411 [wrapper] ==== pilot stdout END ====
[2025-10-11 08:36:48] 2025-10-11 15:36:48,412 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 08:36:48] 2025-10-11 15:36:48,413 [wrapper] pilotpid: 1302793
[2025-10-11 08:36:48] 2025-10-11 15:36:48,414 [wrapper] Pilot exit status: 0
[2025-10-11 08:36:48] 2025-10-11 15:36:48,418 [wrapper] pandaids: 6838119304
[2025-10-11 08:36:48] 2025-10-11 15:36:48,432 [wrapper] cleanup supervisor_pilot 1331810 1302794
[2025-10-11 08:36:48] 2025-10-11 15:36:48,433 [wrapper] Test setup, not cleaning
[2025-10-11 08:36:48] 2025-10-11 15:36:48,434 [wrapper] apfmon messages muted
[2025-10-11 08:36:48] 2025-10-11 15:36:48,436 [wrapper] ==== wrapper stdout END ====
[2025-10-11 08:36:48] 2025-10-11 15:36:48,437 [wrapper] ==== wrapper stderr END ====
[2025-10-11 08:36:48]  *** Error codes and diagnostics ***
[2025-10-11 08:36:48]     "exeErrorCode": 0,
[2025-10-11 08:36:48]     "exeErrorDiag": "",
[2025-10-11 08:36:48]     "pilotErrorCode": 0,
[2025-10-11 08:36:48]     "pilotErrorDiag": "",
[2025-10-11 08:36:48]  *** Listing of results directory ***
[2025-10-11 08:36:48] total 413052
[2025-10-11 08:36:48] -rw-r--r-- 1 boinc boinc      5112 Oct 10 23:35 queuedata.json
[2025-10-11 08:36:48] -rw-r--r-- 1 boinc boinc    557409 Oct 10 23:35 pilot3.tar.gz
[2025-10-11 08:36:48] -rwx------ 1 boinc boinc     36292 Oct 10 23:35 runpilot2-wrapper.sh
[2025-10-11 08:36:48] -rw-r--r-- 1 boinc boinc       100 Oct 11 07:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 08:36:48] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 07:22 run_atlas
[2025-10-11 08:36:48] -rw-r--r-- 1 boinc boinc       105 Oct 11 07:22 job.xml
[2025-10-11 08:36:48] -rw-r--r-- 2 boinc boinc 221821588 Oct 11 07:22 EVNT.46676267._002118.pool.root.1
[2025-10-11 08:36:48] -rw-r--r-- 2 boinc boinc    569682 Oct 11 07:22 input.tar.gz
[2025-10-11 08:36:48] -rw-r--r-- 2 boinc boinc     15120 Oct 11 07:22 start_atlas.sh
[2025-10-11 08:36:48] drwxrwx--x 2 boinc boinc      4096 Oct 11 07:22 shared
[2025-10-11 08:36:48] -rw-r--r-- 1 boinc boinc         0 Oct 11 07:22 boinc_setup_complete
[2025-10-11 08:36:48] -rw-r--r-- 1 boinc boinc      9041 Oct 11 07:22 init_data.xml
[2025-10-11 08:36:48] -rw-r--r-- 1 boinc boinc         0 Oct 11 07:22 boinc_lockfile
[2025-10-11 08:36:48] -rw-r--r-- 1 boinc boinc      2547 Oct 11 07:22 pandaJob.out
[2025-10-11 08:36:48] -rw------- 1 boinc boinc    975536 Oct 11 07:22 agis_schedconf.cvmfs.json
[2025-10-11 08:36:48] -rw------- 1 boinc boinc   1560580 Oct 11 07:22 agis_ddmendpoints.agis.ALL.json
[2025-10-11 08:36:48] drwx------ 5 boinc boinc      4096 Oct 11 07:22 pilot3
[2025-10-11 08:36:48] -rw------- 1 boinc boinc 195441980 Oct 11 08:35 HITS.46676269._052692.pool.root.1
[2025-10-11 08:36:48] -rw-r--r-- 1 boinc boinc       529 Oct 11 08:35 boinc_task_state.xml
[2025-10-11 08:36:48] -rw------- 1 boinc boinc      1022 Oct 11 08:35 memory_monitor_summary.json
[2025-10-11 08:36:48] -rw------- 1 boinc boinc    248564 Oct 11 08:35 log.46676269._052692.job.log.tgz.1
[2025-10-11 08:36:48] -rw------- 1 boinc boinc      7781 Oct 11 08:35 heartbeat.json
[2025-10-11 08:36:48] -rw------- 1 boinc boinc        95 Oct 11 08:36 pilot_heartbeat.json
[2025-10-11 08:36:48] -rw-r--r-- 1 boinc boinc      8192 Oct 11 08:36 boinc_mmap_file
[2025-10-11 08:36:48] -rw-r--r-- 1 boinc boinc        27 Oct 11 08:36 wrapper_checkpoint.txt
[2025-10-11 08:36:48] -rw------- 1 boinc boinc      4749 Oct 11 08:36 pilotlog.txt
[2025-10-11 08:36:48] -rw------- 1 boinc boinc    647506 Oct 11 08:36 log.46676269._052692.job.log.1
[2025-10-11 08:36:48] -rw------- 1 boinc boinc       357 Oct 11 08:36 output.list
[2025-10-11 08:36:48] -rw-r--r-- 1 boinc boinc       620 Oct 11 08:36 runtime_log
[2025-10-11 08:36:48] -rw------- 1 boinc boinc    911360 Oct 11 08:36 result.tar.gz
[2025-10-11 08:36:48] -rw------- 1 boinc boinc       647 Oct 11 08:36 xtLODmtNiR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDcfNDmTj6CNm.diag
[2025-10-11 08:36:48] -rw-r--r-- 1 boinc boinc      8693 Oct 11 08:36 runtime_log.err
[2025-10-11 08:36:48] -rw-r--r-- 1 boinc boinc     21640 Oct 11 08:36 stderr.txt
[2025-10-11 08:36:48] HITS file was successfully produced:
[2025-10-11 08:36:48] -rw------- 1 boinc boinc 195441980 Oct 11 08:35 shared/HITS.pool.root.1
[2025-10-11 08:36:48]  *** Contents of shared directory: ***
[2025-10-11 08:36:48] total 408964
[2025-10-11 08:36:48] -rw-r--r-- 2 boinc boinc 221821588 Oct 11 07:22 ATLAS.root_0
[2025-10-11 08:36:48] -rw-r--r-- 2 boinc boinc    569682 Oct 11 07:22 input.tar.gz
[2025-10-11 08:36:48] -rw-r--r-- 2 boinc boinc     15120 Oct 11 07:22 start_atlas.sh
[2025-10-11 08:36:48] -rw------- 1 boinc boinc 195441980 Oct 11 08:35 HITS.pool.root.1
[2025-10-11 08:36:48] -rw------- 1 boinc boinc    911360 Oct 11 08:36 result.tar.gz
08:36:49 (1299017): run_atlas exited; CPU time 16950.652446
08:36:49 (1299017): called boinc_finish(0)

</stderr_txt>
]]>

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