Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:00:44 (3011041): wrapper (7.7.26015): starting
03:00:44 (3011041): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 03:00:44] Arguments: --nthreads 4
[2025-10-13 03:00:44] Threads: 4
[2025-10-13 03:00:44] Checking for CVMFS
[2025-10-13 03:00:44] No cvmfs_config command found, will try listing directly
[2025-10-13 03:00:44] CVMFS is ok
[2025-10-13 03:00:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 03:00:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 03:00:44] Further information can be found at the LHC@home message board.
[2025-10-13 03:00:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 03:00:44] Checking for apptainer binary...
[2025-10-13 03:00:44] which: no apptainer in ((null))
[2025-10-13 03:00:44] apptainer is not installed, using version from CVMFS
[2025-10-13 03:00:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 03:00:44] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot128/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2025-10-13 03:00:44] apptainer works
[2025-10-13 03:00:44] Set ATHENA_PROC_NUMBER=4
[2025-10-13 03:00:44] Set ATHENA_CORE_NUMBER=4
[2025-10-13 03:00:44] Starting ATLAS job with PandaID=6838292549
[2025-10-13 03:00:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot128/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:31:04]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:31:04] 2025-10-13 03:25:40,455 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 05:31:04] 2025-10-13 03:25:40,474 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2722.4469531249997
[2025-10-13 05:31:04] 2025-10-13 03:25:40,497 | INFO     | using path: /scratch/boinc/var/slot128/slots/0/PanDA_Pilot-6838292549/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 05:31:04] 2025-10-13 03:25:40,498 | INFO     | extracted standard info from prmon json
[2025-10-13 05:31:04] 2025-10-13 03:25:40,498 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 05:31:04] 2025-10-13 03:25:40,498 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 05:31:04] 2025-10-13 03:25:40,498 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 05:31:04] 2025-10-13 03:25:40,499 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 05:31:04] 2025-10-13 03:25:40,501 | INFO     | fitting pss+swap vs Time
[2025-10-13 05:31:04] 2025-10-13 03:25:40,502 | INFO     | sum of square deviations: 887813855.5
[2025-10-13 05:31:04] 2025-10-13 03:25:40,503 | INFO     | sum of deviations: 18413429377.999996
[2025-10-13 05:31:04] 2025-10-13 03:25:40,503 | INFO     | mean x: 1760321592.5
[2025-10-13 05:31:04] 2025-10-13 03:25:40,503 | INFO     | mean y: 2302094.23943662
[2025-10-13 05:31:04] 2025-10-13 03:25:40,503 | INFO     | -- intersect: -36507104832.973404
[2025-10-13 05:31:04] 2025-10-13 03:25:40,503 | INFO     | intersect: -36507104832.973404
[2025-10-13 05:31:04] 2025-10-13 03:25:40,503 | INFO     | chi2: 1.3193130228394032
[2025-10-13 05:31:04] 2025-10-13 03:25:40,503 | INFO     | sum of square deviations: 797291228.0
[2025-10-13 05:31:04] 2025-10-13 03:25:40,504 | INFO     | sum of deviations: 17691809687.0
[2025-10-13 05:31:04] 2025-10-13 03:25:40,504 | INFO     | mean x: 1760321440.0
[2025-10-13 05:31:04] 2025-10-13 03:25:40,504 | INFO     | mean y: 2300878.197080292
[2025-10-13 05:31:04] 2025-10-13 03:25:40,504 | INFO     | -- intersect: -39059049367.11853
[2025-10-13 05:31:04] 2025-10-13 03:25:40,504 | INFO     | intersect: -39059049367.11853
[2025-10-13 05:31:04] 2025-10-13 03:25:40,505 | INFO     | chi2: 1.3205865943221393
[2025-10-13 05:31:04] 2025-10-13 03:25:40,505 | INFO     | current chi2=1.3205865943221393 (change=-0.09653292741665986 %)
[2025-10-13 05:31:04] 2025-10-13 03:25:40,505 | INFO     | right removable region: 136
[2025-10-13 05:31:04] 2025-10-13 03:25:40,505 | INFO     | sum of square deviations: 797291228.0
[2025-10-13 05:31:04] 2025-10-13 03:25:40,506 | INFO     | sum of deviations: 816888453.9999998
[2025-10-13 05:31:04] 2025-10-13 03:25:40,506 | INFO     | mean x: 1760321745.0
[2025-10-13 05:31:04] 2025-10-13 03:25:40,506 | INFO     | mean y: 2331189.686131387
[2025-10-13 05:31:04] 2025-10-13 03:25:40,506 | INFO     | -- intersect: -1801258839.045041
[2025-10-13 05:31:04] 2025-10-13 03:25:40,506 | INFO     | intersect: -1801258839.045041
[2025-10-13 05:31:04] 2025-10-13 03:25:40,506 | INFO     | chi2: 0.003991159360883176
[2025-10-13 05:31:04] 2025-10-13 03:25:40,506 | INFO     | current chi2=0.003991159360883176 (change=99.69748200072387 %)
[2025-10-13 05:31:04] 2025-10-13 03:25:40,507 | INFO     | sum of square deviations: 713140813.0
[2025-10-13 05:31:04] 2025-10-13 03:25:40,507 | INFO     | sum of deviations: 1320521808.5000002
[2025-10-13 05:31:04] 2025-10-13 03:25:40,507 | INFO     | mean x: 1760321897.5
[2025-10-13 05:31:04] 2025-10-13 03:25:40,507 | INFO     | mean y: 2330270.053030303
[2025-10-13 05:31:04] 2025-10-13 03:25:40,508 | INFO     | -- intersect: -3257255232.913902
[2025-10-13 05:31:04] 2025-10-13 03:25:40,508 | INFO     | intersect: -3257255232.913902
[2025-10-13 05:31:04] 2025-10-13 03:25:40,508 | INFO     | chi2: 0.003064690822785011
[2025-10-13 05:31:04] 2025-10-13 03:25:40,508 | INFO     | current chi2=0.003064690822785011 (change=23.2130179310393 %)
[2025-10-13 05:31:04] 2025-10-13 03:25:40,508 | INFO     | left removable region: 20
[2025-10-13 05:31:04] 2025-10-13 03:25:40,508 | INFO     | sum of square deviations: 483971865.0
[2025-10-13 05:31:04] 2025-10-13 03:25:40,509 | INFO     | sum of deviations: 1468373303.5
[2025-10-13 05:31:04] 2025-10-13 03:25:40,509 | INFO     | mean x: 1760322019.5
[2025-10-13 05:31:04] 2025-10-13 03:25:40,509 | INFO     | mean y: 2329524.577586207
[2025-10-13 05:31:04] 2025-10-13 03:25:40,509 | INFO     | -- intersect: -5338497176.158429
[2025-10-13 05:31:04] 2025-10-13 03:25:40,509 | INFO     | intersect: -5338497176.158429
[2025-10-13 05:31:04] 2025-10-13 03:25:40,509 | INFO     | chi2: 0.00029496514299346533
[2025-10-13 05:31:04] 2025-10-13 03:25:40,509 | INFO     | -- intersect: -5338497176.158429
[2025-10-13 05:31:04] 2025-10-13 03:25:40,510 | INFO     | current memory leak: 3.03 B/s (using 116 data points, chi2=0.00)
[2025-10-13 05:31:04] 2025-10-13 03:25:40,510 | INFO     | could have reported an average CPU frequency of 2720 MHz (8 samples)
[2025-10-13 05:31:04] 2025-10-13 03:25:40,510 | INFO     | ..............................
[2025-10-13 05:31:04] 2025-10-13 03:25:40,510 | INFO     | . Timing measurements:
[2025-10-13 05:31:04] 2025-10-13 03:25:40,510 | INFO     | . get job = 0 s
[2025-10-13 05:31:04] 2025-10-13 03:25:40,510 | INFO     | . initial setup = 1 s
[2025-10-13 05:31:04] 2025-10-13 03:25:40,510 | INFO     | . payload setup = 8 s
[2025-10-13 05:31:04] 2025-10-13 03:25:40,511 | INFO     | . stage-in = 0 s
[2025-10-13 05:31:04] 2025-10-13 03:25:40,511 | INFO     | . payload execution = 8640 s
[2025-10-13 05:31:04] 2025-10-13 03:25:40,511 | INFO     | . stage-out = 0 s
[2025-10-13 05:31:04] 2025-10-13 03:25:40,511 | INFO     | . log creation = 0 s
[2025-10-13 05:31:04] 2025-10-13 03:25:40,511 | INFO     | ..............................
[2025-10-13 05:31:04] 2025-10-13 03:25:40,609 | INFO     | 
[2025-10-13 05:31:04] 2025-10-13 03:25:40,609 | INFO     | job summary report
[2025-10-13 05:31:04] 2025-10-13 03:25:40,609 | INFO     | --------------------------------------------------
[2025-10-13 05:31:04] 2025-10-13 03:25:40,609 | INFO     | PanDA job id: 6838292549
[2025-10-13 05:31:04] 2025-10-13 03:25:40,610 | INFO     | task id: 46676269
[2025-10-13 05:31:04] 2025-10-13 03:25:40,610 | INFO     | errors: (none)
[2025-10-13 05:31:04] 2025-10-13 03:25:40,610 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:31:04] 2025-10-13 03:25:40,610 | INFO     | pilot state: finished 
[2025-10-13 05:31:04] 2025-10-13 03:25:40,610 | INFO     | transexitcode: 0
[2025-10-13 05:31:04] 2025-10-13 03:25:40,610 | INFO     | exeerrorcode: 0
[2025-10-13 05:31:04] 2025-10-13 03:25:40,610 | INFO     | exeerrordiag: 
[2025-10-13 05:31:04] 2025-10-13 03:25:40,610 | INFO     | exitcode: 0
[2025-10-13 05:31:04] 2025-10-13 03:25:40,610 | INFO     | exitmsg: OK
[2025-10-13 05:31:04] 2025-10-13 03:25:40,610 | INFO     | cpuconsumptiontime: 33159 s
[2025-10-13 05:31:04] 2025-10-13 03:25:40,610 | INFO     | nevents: 400
[2025-10-13 05:31:04] 2025-10-13 03:25:40,610 | INFO     | neventsw: 0
[2025-10-13 05:31:04] 2025-10-13 03:25:40,611 | INFO     | pid: 3022406
[2025-10-13 05:31:04] 2025-10-13 03:25:40,611 | INFO     | pgrp: 3022406
[2025-10-13 05:31:04] 2025-10-13 03:25:40,611 | INFO     | corecount: 4
[2025-10-13 05:31:04] 2025-10-13 03:25:40,611 | INFO     | event service: False
[2025-10-13 05:31:04] 2025-10-13 03:25:40,611 | INFO     | sizes: {0: 2348755, 1: 2348897, 7: 2349159, 11: 2349187, 8653: 2377607, 8654: 2386629, 8655: 2386813, 8664: 2387007}
[2025-10-13 05:31:04] 2025-10-13 03:25:40,611 | INFO     | --------------------------------------------------
[2025-10-13 05:31:04] 2025-10-13 03:25:40,611 | INFO     | 
[2025-10-13 05:31:04] 2025-10-13 03:25:40,611 | INFO     | executing command: ls -lF /scratch/boinc/var/slot128/slots/0
[2025-10-13 05:31:04] 2025-10-13 03:25:40,640 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:31:04] 2025-10-13 03:25:40,641 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:31:04] 2025-10-13 03:25:40,641 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:31:04] 2025-10-13 03:25:40,641 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:31:04] 2025-10-13 03:25:40,641 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:31:04] 2025-10-13 03:25:40,641 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:31:04] 2025-10-13 03:25:40,641 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:31:04] 2025-10-13 03:25:40,641 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:31:04] 2025-10-13 03:25:40,641 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:31:04] 2025-10-13 03:25:40,642 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:31:04] 2025-10-13 03:25:40,642 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:31:04] 2025-10-13 03:25:40,642 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:31:04] 2025-10-13 03:25:40,642 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:31:04] 2025-10-13 03:25:40,642 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:31:04] 2025-10-13 03:25:40,642 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:31:04] 2025-10-13 03:25:40,642 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:31:04] 2025-10-13 03:25:40,642 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:31:04] 2025-10-13 03:25:40,642 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:31:04] 2025-10-13 03:25:40,642 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:31:04] 2025-10-13 03:25:40,642 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:31:04] 2025-10-13 03:25:40,643 | INFO     | job 6838292549 has completed (purged errors)
[2025-10-13 05:31:04] 2025-10-13 03:25:40,643 | INFO     | overall cleanup function is called
[2025-10-13 05:31:04] 2025-10-13 03:25:41,648 | INFO     | --- collectZombieJob: --- 10, [3022406]
[2025-10-13 05:31:04] 2025-10-13 03:25:41,648 | INFO     | zombie collector waiting for pid 3022406
[2025-10-13 05:31:04] 2025-10-13 03:25:41,648 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:31:04] 2025-10-13 03:25:41,648 | INFO     | collected zombie processes
[2025-10-13 05:31:04] 2025-10-13 03:25:41,649 | INFO     | will attempt to kill all subprocesses of pid=3022406
[2025-10-13 05:31:04] 2025-10-13 03:25:42,368 | INFO     | process IDs to be killed: [3022406] (in reverse order)
[2025-10-13 05:31:04] 2025-10-13 03:25:42,598 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:31:04] 2025-10-13 03:25:42,599 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:31:04] 2025-10-13 03:25:42,626 | INFO     | did not find any defunct processes belonging to 3022406
[2025-10-13 05:31:04] 2025-10-13 03:25:42,650 | INFO     | did not find any defunct processes belonging to 3022406
[2025-10-13 05:31:04] 2025-10-13 03:25:42,651 | INFO     | ready for new job
[2025-10-13 05:31:04] 2025-10-13 03:25:42,651 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:31:04] 2025-10-13 03:25:42,653 | INFO     | ***************************************
[2025-10-13 05:31:04] 2025-10-13 03:25:42,653 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:31:04] 2025-10-13 03:25:42,653 | INFO     | ***************************************
[2025-10-13 05:31:04] 2025-10-13 03:25:42,653 | INFO     | 
[2025-10-13 05:31:04] 2025-10-13 03:25:42,661 | INFO     | architecture information:
[2025-10-13 05:31:04] 2025-10-13 03:25:42,662 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:31:04] 2025-10-13 03:25:42,686 | INFO     | cat /etc/os-release:
[2025-10-13 05:31:04] NAME="CentOS Linux"
[2025-10-13 05:31:04] VERSION="7 (Core)"
[2025-10-13 05:31:04] ID="centos"
[2025-10-13 05:31:04] ID_LIKE="rhel fedora"
[2025-10-13 05:31:04] VERSION_ID="7"
[2025-10-13 05:31:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:31:04] ANSI_COLOR="0;31"
[2025-10-13 05:31:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:31:04] HOME_URL="https://www.centos.org/"
[2025-10-13 05:31:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:31:04] 
[2025-10-13 05:31:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:31:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:31:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:31:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:31:04] 
[2025-10-13 05:31:04] 2025-10-13 03:25:42,686 | INFO     | ***************************************
[2025-10-13 05:31:04] 2025-10-13 03:25:43,189 | INFO     | executing command: df -mP /scratch/boinc/var/slot128/slots/0
[2025-10-13 05:31:04] 2025-10-13 03:25:43,213 | INFO     | sufficient remaining disk space (3335634550784 B)
[2025-10-13 05:31:04] 2025-10-13 03:25:43,213 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:31:04] 2025-10-13 03:25:43,214 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:31:04] 2025-10-13 03:25:43,214 | INFO     | update_server=False
[2025-10-13 05:31:04] 2025-10-13 03:25:43,214 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:31:04] 2025-10-13 03:25:43,259 | INFO     | all job control threads have been joined
[2025-10-13 05:31:04] 2025-10-13 03:25:43,434 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 05:31:04] 2025-10-13 03:25:43,437 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 05:31:04] 2025-10-13 03:25:43,437 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:31:04] 2025-10-13 03:25:43,437 | INFO     | will abort loop
[2025-10-13 05:31:04] 2025-10-13 03:25:43,491 | INFO     | all payload control threads have been joined
[2025-10-13 05:31:04] 2025-10-13 03:25:43,660 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:31:04] 2025-10-13 03:25:43,674 | INFO     | all data control threads have been joined
[2025-10-13 05:31:04] 2025-10-13 03:25:44,219 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:31:04] 2025-10-13 03:25:44,269 | INFO     | [job] control thread has finished
[2025-10-13 05:31:04] 2025-10-13 03:25:44,439 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:31:04] 2025-10-13 03:25:44,497 | INFO     | [payload] control thread has finished
[2025-10-13 05:31:04] 2025-10-13 03:25:44,630 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:31:04] 2025-10-13 03:25:44,679 | INFO     | [data] control thread has finished
[2025-10-13 05:31:04] 2025-10-13 03:25:45,086 | INFO     | [job] validate thread has finished
[2025-10-13 05:31:04] 2025-10-13 03:25:45,182 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:31:04] 2025-10-13 03:25:45,189 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:31:04] 2025-10-13 03:25:45,328 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:31:04] 2025-10-13 03:25:45,433 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:31:04] 2025-10-13 03:25:45,619 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:31:04] 2025-10-13 03:25:45,665 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:31:04] 2025-10-13 03:25:45,688 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:31:04] 2025-10-13 03:25:46,494 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:31:04] 2025-10-13 03:25:46,624 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:31:04] 2025-10-13 03:25:50,500 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:31:04] 2025-10-13 03:25:53,525 | INFO     | job.realtimelogging is not enabled
[2025-10-13 05:31:04] 2025-10-13 03:25:54,531 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:31:04] 2025-10-13 03:26:11,687 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:31:04] 2025-10-13 03:26:11,972 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22820130465600)>', '<ExcThread(monitor, started 22819823924992)>']
[2025-10-13 05:31:04] 2025-10-13 03:26:12,683 | INFO     | PID=3015026 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 05:31:04] 2025-10-13 03:26:12,684 | INFO     | .. there are 8 such processes running
[2025-10-13 05:31:04] 2025-10-13 03:26:12,684 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:31:04] 2025-10-13 03:26:12,684 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:31:04] 2025-10-13 03:26:12,684 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:31:04] 2025-10-13 03:26:12,684 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:31:04] 2025-10-13 03:26:12,684 | INFO     | [monitor] control thread has ended
[2025-10-13 05:31:04] 2025-10-13 03:26:16,999 | INFO     | all workflow threads have been joined
[2025-10-13 05:31:04] 2025-10-13 03:26:16,999 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:31:04] 2025-10-13 03:26:17,000 | INFO     | traces error code: 0
[2025-10-13 05:31:04] 2025-10-13 03:26:17,000 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:31:04] 2025-10-13 03:26:17,145 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:31:04] 2025-10-13 03:26:17,148 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:31:04] 2025-10-13 03:26:17,151 [wrapper] pilotpid: 3015026
[2025-10-13 05:31:04] 2025-10-13 03:26:17,153 [wrapper] Pilot exit status: 0
[2025-10-13 05:31:04] 2025-10-13 03:26:17,165 [wrapper] pandaids: 6838292549
[2025-10-13 05:31:04] 2025-10-13 03:26:17,329 [wrapper] cleanup supervisor_pilot 3342779 3015027
[2025-10-13 05:31:04] 2025-10-13 03:26:17,334 [wrapper] Test setup, not cleaning
[2025-10-13 05:31:04] 2025-10-13 03:26:17,337 [wrapper] apfmon messages muted
[2025-10-13 05:31:04] 2025-10-13 03:26:17,340 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:31:04] 2025-10-13 03:26:17,342 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:31:04]  *** Error codes and diagnostics ***
[2025-10-13 05:31:04]     "exeErrorCode": 0,
[2025-10-13 05:31:04]     "exeErrorDiag": "",
[2025-10-13 05:31:04]     "pilotErrorCode": 0,
[2025-10-13 05:31:04]     "pilotErrorDiag": "",
[2025-10-13 05:31:04]  *** Listing of results directory ***
[2025-10-13 05:31:04] total 415300
[2025-10-13 05:31:04] -rw-r--r-- 1 boinc boinc    557409 Oct 11 11:03 pilot3.tar.gz
[2025-10-13 05:31:04] -rwx------ 1 boinc boinc     36292 Oct 11 11:11 runpilot2-wrapper.sh
[2025-10-13 05:31:04] -rw-r--r-- 1 boinc boinc      5112 Oct 11 11:11 queuedata.json
[2025-10-13 05:31:04] -rw-r--r-- 1 boinc boinc       100 Oct 13 03:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:31:04] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 03:00 run_atlas
[2025-10-13 05:31:04] -rw-r--r-- 1 boinc boinc       105 Oct 13 03:00 job.xml
[2025-10-13 05:31:04] -rw-r--r-- 1 boinc boinc      6688 Oct 13 03:00 init_data.xml
[2025-10-13 05:31:04] -rw-r--r-- 2 boinc boinc 222212920 Oct 13 03:00 EVNT.46676267._002205.pool.root.1
[2025-10-13 05:31:04] -rw-r--r-- 2 boinc boinc     15120 Oct 13 03:00 start_atlas.sh
[2025-10-13 05:31:04] drwxrwx--x 2 boinc boinc      4096 Oct 13 03:00 shared
[2025-10-13 05:31:04] -rw-r--r-- 2 boinc boinc    569675 Oct 13 03:00 input.tar.gz
[2025-10-13 05:31:04] -rw-r--r-- 1 boinc boinc         0 Oct 13 03:00 boinc_lockfile
[2025-10-13 05:31:04] -rw-r--r-- 1 boinc boinc      2550 Oct 13 03:00 pandaJob.out
[2025-10-13 05:31:04] -rw------- 1 boinc boinc    975603 Oct 13 03:00 agis_schedconf.cvmfs.json
[2025-10-13 05:31:04] -rw------- 1 boinc boinc   1560580 Oct 13 03:00 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:31:04] drwx------ 5 boinc boinc      4096 Oct 13 03:00 pilot3
[2025-10-13 05:31:04] -rw------- 1 boinc boinc 196049390 Oct 13 05:24 HITS.46676269._054988.pool.root.1
[2025-10-13 05:31:04] -rw-r--r-- 1 boinc boinc       528 Oct 13 05:25 boinc_task_state.xml
[2025-10-13 05:31:04] -rw------- 1 boinc boinc        95 Oct 13 05:25 pilot_heartbeat.json
[2025-10-13 05:31:04] -rw------- 1 boinc boinc      1024 Oct 13 05:25 memory_monitor_summary.json
[2025-10-13 05:31:04] -rw------- 1 boinc boinc    321777 Oct 13 05:25 log.46676269._054988.job.log.tgz.1
[2025-10-13 05:31:04] -rw------- 1 boinc boinc      7780 Oct 13 05:25 heartbeat.json
[2025-10-13 05:31:04] -rw------- 1 boinc boinc      5093 Oct 13 05:26 pilotlog.txt
[2025-10-13 05:31:04] -rw------- 1 boinc boinc   1224842 Oct 13 05:26 log.46676269._054988.job.log.1
[2025-10-13 05:31:04] -rw------- 1 boinc boinc       357 Oct 13 05:26 output.list
[2025-10-13 05:31:04] -rw-r--r-- 1 boinc boinc       620 Oct 13 05:26 runtime_log
[2025-10-13 05:31:04] -rw------- 1 boinc boinc   1566720 Oct 13 05:26 result.tar.gz
[2025-10-13 05:31:04] -rw-r--r-- 1 boinc boinc      9084 Oct 13 05:26 runtime_log.err
[2025-10-13 05:31:04] -rw------- 1 boinc boinc       662 Oct 13 05:26 dyPKDm9nkR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6zfNDmzqbEIn.diag
[2025-10-13 05:31:04] -rw-r--r-- 1 boinc boinc        26 Oct 13 05:30 wrapper_checkpoint.txt
[2025-10-13 05:31:04] -rw-r--r-- 1 boinc boinc      8192 Oct 13 05:31 boinc_mmap_file
[2025-10-13 05:31:04] -rw-r--r-- 1 boinc boinc     20876 Oct 13 05:31 stderr.txt
[2025-10-13 05:31:04] HITS file was successfully produced:
[2025-10-13 05:31:04] -rw------- 1 boinc boinc 196049390 Oct 13 05:24 shared/HITS.pool.root.1
[2025-10-13 05:31:04]  *** Contents of shared directory: ***
[2025-10-13 05:31:04] total 410580
[2025-10-13 05:31:04] -rw-r--r-- 2 boinc boinc 222212920 Oct 13 03:00 ATLAS.root_0
[2025-10-13 05:31:04] -rw-r--r-- 2 boinc boinc     15120 Oct 13 03:00 start_atlas.sh
[2025-10-13 05:31:04] -rw-r--r-- 2 boinc boinc    569675 Oct 13 03:00 input.tar.gz
[2025-10-13 05:31:04] -rw------- 1 boinc boinc 196049390 Oct 13 05:24 HITS.pool.root.1
[2025-10-13 05:31:04] -rw------- 1 boinc boinc   1566720 Oct 13 05:26 result.tar.gz
05:31:05 (3011041): run_atlas exited; CPU time 33744.034411
05:31:05 (3011041): called boinc_finish(0)

</stderr_txt>
]]>

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