Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:55:52 (1702182): wrapper (7.7.26015): starting
04:55:52 (1702182): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 04:55:52] Arguments: --nthreads 12
[2025-10-11 04:55:52] Threads: 12
[2025-10-11 04:55:52] Checking for CVMFS
[2025-10-11 04:55:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 04:55:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 04:55:52] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 04:55:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 04:55:53] 2.11.5.0 2869 29982 229780 151583 0 858 25836714 45568001 23509 130560 0 272237635 99.844 121517594 25807 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-11 04:55:53] CVMFS is ok
[2025-10-11 04:55:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 04:55:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 04:55:53] Further information can be found at the LHC@home message board.
[2025-10-11 04:55:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 04:55:53] Checking for apptainer binary...
[2025-10-11 04:55:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 04:55:53] Running /usr/bin/apptainer --version
[2025-10-11 04:55:53] apptainer version 1.4.1-1.el9
[2025-10-11 04:55:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 04:55:54] wns0048.triumf.lcg
[2025-10-11 04:55:54] apptainer works
[2025-10-11 04:55:54] Set ATHENA_PROC_NUMBER=12
[2025-10-11 04:55:54] Set ATHENA_CORE_NUMBER=12
[2025-10-11 04:55:54] Starting ATLAS job with PandaID=6838292497
[2025-10-11 04:55:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 05:01:29]  *** The last 200 lines of the pilot log: ***
[2025-10-11 05:01:29] 2025-10-11 12:00:55,016 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 05:01:29] 2025-10-11 12:00:55,016 | WARNING  | wrong length of table data, x=[1760183869.0], y=[667.0] (must be same and length>=4)
[2025-10-11 05:01:29] 2025-10-11 12:00:55,016 | INFO     | could have reported an average CPU frequency of 2598 MHz (4 samples)
[2025-10-11 05:01:29] 2025-10-11 12:00:55,016 | INFO     | ..............................
[2025-10-11 05:01:29] 2025-10-11 12:00:55,016 | INFO     | . Timing measurements:
[2025-10-11 05:01:29] 2025-10-11 12:00:55,017 | INFO     | . get job = 0 s
[2025-10-11 05:01:29] 2025-10-11 12:00:55,017 | INFO     | . initial setup = 4 s
[2025-10-11 05:01:29] 2025-10-11 12:00:55,017 | INFO     | . payload setup = 22 s
[2025-10-11 05:01:29] 2025-10-11 12:00:55,017 | INFO     | . stage-in = 0 s
[2025-10-11 05:01:29] 2025-10-11 12:00:55,017 | INFO     | . payload execution = 69 s
[2025-10-11 05:01:29] 2025-10-11 12:00:55,017 | INFO     | . stage-out = 1 s
[2025-10-11 05:01:29] 2025-10-11 12:00:55,017 | INFO     | . log creation = 0 s
[2025-10-11 05:01:29] 2025-10-11 12:00:55,017 | INFO     | ..............................
[2025-10-11 05:01:29] 2025-10-11 12:00:55,017 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 05:01:29] 2025-10-11 12:00:55,017 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838292497/pilotlog.txt
[2025-10-11 05:01:29] 2025-10-11 12:00:55,033 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-11 05:01:29] - Log from pilotlog.txt -
[2025-10-11 05:01:29] 2025-10-11 12:00:55,015 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6838292497/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 05:01:29] 2025-10-11 12:00:55,015 | INFO     | extracted standard info from prmon json
[2025-10-11 05:01:29] 2025-10-11 12:00:55,015 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 05:01:29] 2025-10-11 12:00:55,015 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 05:01:29] 2025-10-11 12:00:55,016 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 05:01:29] 2025-10-11 12:00:55,016 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 05:01:29] 2025-10-11 12:00:55,016 | WARNING  | wrong length of table data, x=[1760183869.0], y=[667.0] (must be same and length>=4)
[2025-10-11 05:01:29] 2025-10-11 12:00:55,016 | INFO     | could have reported an average CPU frequency of 2598 MHz (4 samples)
[2025-10-11 05:01:29] 2025-10-11 12:00:55,016 | INFO     | ..............................
[2025-10-11 05:01:29] 2025-10-11 12:00:55,016 | INFO     | . Timing measurements:
[2025-10-11 05:01:29] 2025-10-11 12:00:55,017 | INFO     | . get job = 0 s
[2025-10-11 05:01:29] 2025-10-11 12:00:55,017 | INFO     | . initial setup = 4 s
[2025-10-11 05:01:29] 2025-10-11 12:00:55,017 | INFO     | . payload setup = 22 s
[2025-10-11 05:01:29] 2025-10-11 12:00:55,017 | INFO     | . stage-in = 0 s
[2025-10-11 05:01:29] 2025-10-11 12:00:55,017 | INFO     | . payload execution = 69 s
[2025-10-11 05:01:29] 2025-10-11 12:00:55,017 | INFO     | . stage-out = 1 s
[2025-10-11 05:01:29] 2025-10-11 12:00:55,017 | INFO     | . log creation = 0 s
[2025-10-11 05:01:29] 2025-10-11 12:00:55,017 | INFO     | ..............................
[2025-10-11 05:01:29] 2025-10-11 12:00:55,017 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 05:01:29] 2025-10-11 12:00:55,017 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838292497/pilotlog.txt
[2025-10-11 05:01:29] 2025-10-11 12:00:55,033 | WARNING  | 
[2025-10-11 05:01:29] [begin log extracts]
[2025-10-11 05:01:29] - Log from pilotlog.txt -
[2025-10-11 05:01:29] 2025-10-11 12:00:55,015 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6838292497/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 05:01:29] 2025-10-11 12:00:55,015 | INFO     | extracted standard info from prmon json
[2025-10-11 05:01:29] 2025-10-11 12:00:55,015 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 05:01:29] 2025-10-11 12:00:55,015 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 05:01:29] 2025-10-11 12:00:55,016 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 05:01:29] 2025-10-11 12:00:55,016 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 05:01:29] 2025-10-11 12:00:55,016 | WARNING  | wrong length of table data, x=[1760183869.0], y=[667.0] (must be same and length>=4)
[2025-10-11 05:01:29] 2025-10-11 12:00:55,016 | INFO     | could have reported an average CPU frequency of 2598 MHz (4 samples)
[2025-10-11 05:01:29] 2025-10-11 12:00:55,016 | INFO     | ..............................
[2025-10-11 05:01:29] 2025-10-11 12:00:55,016 | INFO     | . Timing measurements:
[2025-10-11 05:01:29] 2025-10-11 12:00:55,017 | INFO     | . get job = 0 s
[2025-10-11 05:01:29] 2025-10-11 12:00:55,017 | INFO     | . initial setup = 4 s
[2025-10-11 05:01:29] 2025-10-11 12:00:55,017 | INFO     | . payload setup = 22 s
[2025-10-11 05:01:29] 2025-10-11 12:00:55,017 | INFO     | . stage-in = 0 s
[2025-10-11 05:01:29] 2025-10-11 12:00:55,017 | INFO     | . payload execution = 69 s
[2025-10-11 05:01:29] 2025-10-11 12:00:55,017 | INFO     | . stage-out = 1 s
[2025-10-11 05:01:29] 2025-10-11 12:00:55,017 | INFO     | . log creation = 0 s
[2025-10-11 05:01:29] 2025-10-11 12:00:55,017 | INFO     | ..............................
[2025-10-11 05:01:29] 2025-10-11 12:00:55,017 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 05:01:29] 2025-10-11 12:00:55,017 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6838292497/pilotlog.txt
[2025-10-11 05:01:29] [end log extracts]
[2025-10-11 05:01:29] 2025-10-11 12:00:55,033 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-11 05:01:29] 2025-10-11 12:00:55,034 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-11 05:01:29] 2025-10-11 12:00:55,114 | INFO     | 
[2025-10-11 05:01:29] 2025-10-11 12:00:55,114 | INFO     | job summary report
[2025-10-11 05:01:29] 2025-10-11 12:00:55,115 | INFO     | --------------------------------------------------
[2025-10-11 05:01:29] 2025-10-11 12:00:55,115 | INFO     | PanDA job id: 6838292497
[2025-10-11 05:01:29] 2025-10-11 12:00:55,115 | INFO     | task id: 46676269
[2025-10-11 05:01:29] 2025-10-11 12:00:55,115 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-11 04:58:31,094 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-11 05:01:29] 2025-10-11 12:00:55,115 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 05:01:29] 2025-10-11 12:00:55,115 | INFO     | pilot state: failed 
[2025-10-11 05:01:29] 2025-10-11 12:00:55,115 | INFO     | transexitcode: 65
[2025-10-11 05:01:29] 2025-10-11 12:00:55,115 | INFO     | exeerrorcode: 65
[2025-10-11 05:01:29] 2025-10-11 12:00:55,115 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 05:01:29] 2025-10-11 12:00:55,115 | INFO     | exitcode: 65
[2025-10-11 05:01:29] 2025-10-11 12:00:55,115 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 05:01:29] 2025-10-11 12:00:55,115 | INFO     | cpuconsumptiontime: 19 s
[2025-10-11 05:01:29] 2025-10-11 12:00:55,115 | INFO     | nevents: 0
[2025-10-11 05:01:29] 2025-10-11 12:00:55,115 | INFO     | neventsw: 0
[2025-10-11 05:01:29] 2025-10-11 12:00:55,115 | INFO     | pid: 1726869
[2025-10-11 05:01:29] 2025-10-11 12:00:55,115 | INFO     | pgrp: 1726869
[2025-10-11 05:01:29] 2025-10-11 12:00:55,115 | INFO     | corecount: 12
[2025-10-11 05:01:29] 2025-10-11 12:00:55,115 | INFO     | event service: False
[2025-10-11 05:01:29] 2025-10-11 12:00:55,115 | INFO     | sizes: {0: 2348627, 1: 2348711, 2: 2348882, 13: 2348910, 19: 2349228, 24: 2349256, 96: 2372710, 98: 2377002, 100: 2377030, 231: 2377196}
[2025-10-11 05:01:29] 2025-10-11 12:00:55,115 | INFO     | --------------------------------------------------
[2025-10-11 05:01:29] 2025-10-11 12:00:55,115 | INFO     | 
[2025-10-11 05:01:29] 2025-10-11 12:00:55,116 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-11 05:01:29] 2025-10-11 12:00:55,135 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 05:01:29] 2025-10-11 12:00:55,135 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 05:01:29] 2025-10-11 12:00:55,135 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 05:01:29] 2025-10-11 12:00:55,135 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 05:01:29] 2025-10-11 12:00:55,135 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 05:01:29] 2025-10-11 12:00:55,135 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 05:01:29] 2025-10-11 12:00:55,135 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 05:01:29] 2025-10-11 12:00:55,136 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 05:01:29] 2025-10-11 12:00:55,136 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 05:01:29] 2025-10-11 12:00:55,136 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 05:01:29] 2025-10-11 12:00:55,136 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 05:01:29] 2025-10-11 12:00:55,136 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 05:01:29] 2025-10-11 12:00:55,136 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 05:01:29] 2025-10-11 12:00:55,136 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 05:01:29] 2025-10-11 12:00:55,136 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 05:01:29] 2025-10-11 12:00:55,136 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 05:01:29] 2025-10-11 12:00:55,136 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 05:01:29] 2025-10-11 12:00:55,136 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 05:01:29] 2025-10-11 12:00:55,136 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 05:01:29] 2025-10-11 12:00:55,136 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 05:01:29] 2025-10-11 12:00:55,137 | INFO     | job 6838292497 has completed (purged errors)
[2025-10-11 05:01:29] 2025-10-11 12:00:55,137 | INFO     | overall cleanup function is called
[2025-10-11 05:01:29] 2025-10-11 12:00:55,917 | INFO     | PID=1705913 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 05:01:29] 2025-10-11 12:00:55,917 | INFO     | .. there are 35 such processes running
[2025-10-11 05:01:29] 2025-10-11 12:00:56,143 | INFO     | --- collectZombieJob: --- 10, [1726869]
[2025-10-11 05:01:29] 2025-10-11 12:00:56,144 | INFO     | zombie collector waiting for pid 1726869
[2025-10-11 05:01:29] 2025-10-11 12:00:56,144 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 05:01:29] 2025-10-11 12:00:56,144 | INFO     | collected zombie processes
[2025-10-11 05:01:29] 2025-10-11 12:00:56,144 | INFO     | will attempt to kill all subprocesses of pid=1726869
[2025-10-11 05:01:29] 2025-10-11 12:00:56,599 | INFO     | process IDs to be killed: [1726869] (in reverse order)
[2025-10-11 05:01:29] 2025-10-11 12:00:56,746 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 05:01:29] 2025-10-11 12:00:56,747 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 05:01:29] 2025-10-11 12:00:56,757 | INFO     | did not find any defunct processes belonging to 1726869
[2025-10-11 05:01:29] 2025-10-11 12:00:56,830 | INFO     | did not find any defunct processes belonging to 1726869
[2025-10-11 05:01:29] 2025-10-11 12:00:56,831 | INFO     | ready for new job
[2025-10-11 05:01:29] 2025-10-11 12:00:56,832 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 05:01:29] 2025-10-11 12:00:56,833 | INFO     | ***************************************
[2025-10-11 05:01:29] 2025-10-11 12:00:56,833 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 05:01:29] 2025-10-11 12:00:56,833 | INFO     | ***************************************
[2025-10-11 05:01:29] 2025-10-11 12:00:56,833 | INFO     | 
[2025-10-11 05:01:29] 2025-10-11 12:00:56,835 | INFO     | architecture information:
[2025-10-11 05:01:29] 2025-10-11 12:00:56,836 | INFO     | executing command: cat /etc/os-release
[2025-10-11 05:01:29] 2025-10-11 12:00:56,865 | INFO     | cat /etc/os-release:
[2025-10-11 05:01:29] NAME="CentOS Linux"
[2025-10-11 05:01:29] VERSION="7 (Core)"
[2025-10-11 05:01:29] ID="centos"
[2025-10-11 05:01:29] ID_LIKE="rhel fedora"
[2025-10-11 05:01:29] VERSION_ID="7"
[2025-10-11 05:01:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 05:01:29] ANSI_COLOR="0;31"
[2025-10-11 05:01:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 05:01:29] HOME_URL="https://www.centos.org/"
[2025-10-11 05:01:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 05:01:29] 
[2025-10-11 05:01:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 05:01:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 05:01:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 05:01:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 05:01:29] 
[2025-10-11 05:01:29] 2025-10-11 12:00:56,865 | INFO     | ***************************************
[2025-10-11 05:01:29] 2025-10-11 12:00:57,368 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-11 05:01:29] 2025-10-11 12:00:57,390 | INFO     | sufficient remaining disk space (1813739732992 B)
[2025-10-11 05:01:29] 2025-10-11 12:00:57,390 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 05:01:29] 2025-10-11 12:00:57,390 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 05:01:29] 2025-10-11 12:00:57,390 | INFO     | update_server=False
[2025-10-11 05:01:29] 2025-10-11 12:00:57,390 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 05:01:29] 2025-10-11 12:00:57,393 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 05:01:29] 2025-10-11 12:00:57,393 | INFO     | aborting loop
[2025-10-11 05:01:29] 2025-10-11 12:00:57,516 | INFO     | all data control threads have been joined
[2025-10-11 05:01:29] 2025-10-11 12:00:58,160 | INFO     | all job control threads have been joined
[2025-10-11 05:01:29] 2025-10-11 12:00:58,165 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 05:01:29] 2025-10-11 12:00:58,396 | INFO     | [job] retrieve thread has finished
[2025-10-11 05:01:29] 2025-10-11 12:00:58,399 | INFO     | [job] job monitor thread has finished
[2025-10-11 05:01:29] 2025-10-11 12:00:58,446 | INFO     | [data] copytool_in thread has finished
[2025-10-11 05:01:29] 2025-10-11 12:00:58,522 | INFO     | [data] control thread has finished
[2025-10-11 05:01:29] 2025-10-11 12:00:58,683 | INFO     | all payload control threads have been joined
[2025-10-11 05:01:29] 2025-10-11 12:00:58,770 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 05:01:29] 2025-10-11 12:00:58,773 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 05:01:29] 2025-10-11 12:00:59,002 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 05:01:29] 2025-10-11 12:00:59,170 | INFO     | [job] control thread has finished
[2025-10-11 05:01:29] 2025-10-11 12:00:59,451 | INFO     | [job] validate thread has finished
[2025-10-11 05:01:29] 2025-10-11 12:00:59,619 | INFO     | [payload] validate_post thread has finished
[2025-10-11 05:01:29] 2025-10-11 12:00:59,623 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 05:01:29] 2025-10-11 12:00:59,688 | INFO     | [payload] control thread has finished
[2025-10-11 05:01:29] 2025-10-11 12:00:59,961 | INFO     | [payload] failed_post thread has finished
[2025-10-11 05:01:29] 2025-10-11 12:01:00,129 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 05:01:29] 2025-10-11 12:01:00,172 | INFO     | [data] copytool_out thread has finished
[2025-10-11 05:01:29] 2025-10-11 12:01:00,788 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 05:01:29] 2025-10-11 12:01:01,135 | INFO     | [job] queue monitor thread has finished
[2025-10-11 05:01:29] 2025-10-11 12:01:04,796 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 05:01:29] 2025-10-11 12:01:21,413 | INFO     | [monitor] cgroup control has ended
[2025-10-11 05:01:29] 2025-10-11 12:01:22,820 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140681191987008)>', '<ExcThread(monitor, started 140680353531648)>']
[2025-10-11 05:01:29] 2025-10-11 12:01:27,846 | INFO     | all workflow threads have been joined
[2025-10-11 05:01:29] 2025-10-11 12:01:27,847 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 05:01:29] 2025-10-11 12:01:27,847 | INFO     | traces error code: 0
[2025-10-11 05:01:29] 2025-10-11 12:01:27,847 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 05:01:29] 2025-10-11 12:01:28,287 | INFO     | PID=1705913 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 05:01:29] 2025-10-11 12:01:28,287 | INFO     | .. there are 35 such processes running
[2025-10-11 05:01:29] 2025-10-11 12:01:28,288 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 05:01:29] 2025-10-11 12:01:28,288 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 05:01:29] 2025-10-11 12:01:28,288 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 05:01:29] 2025-10-11 12:01:28,288 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 05:01:29] 2025-10-11 12:01:28,288 | INFO     | [monitor] control thread has ended
[2025-10-11 05:01:29] 2025-10-11 12:01:28,726 [wrapper] ==== pilot stdout END ====
[2025-10-11 05:01:29] 2025-10-11 12:01:28,728 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 05:01:29] 2025-10-11 12:01:28,730 [wrapper] pilotpid: 1705913
[2025-10-11 05:01:29] 2025-10-11 12:01:28,732 [wrapper] Pilot exit status: 0
[2025-10-11 05:01:29] 2025-10-11 12:01:28,806 [wrapper] pandaids: 6838292497
[2025-10-11 05:01:29] 2025-10-11 12:01:29,096 [wrapper] cleanup supervisor_pilot 1705919 1705914
[2025-10-11 05:01:29] 2025-10-11 12:01:29,122 [wrapper] Test setup, not cleaning
[2025-10-11 05:01:29] 2025-10-11 12:01:29,132 [wrapper] apfmon messages muted
[2025-10-11 05:01:29] 2025-10-11 12:01:29,134 [wrapper] ==== wrapper stdout END ====
[2025-10-11 05:01:29] 2025-10-11 12:01:29,136 [wrapper] ==== wrapper stderr END ====
[2025-10-11 05:01:29]  *** Error codes and diagnostics ***
[2025-10-11 05:01:29]     "exeErrorCode": 65,
[2025-10-11 05:01:29]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 05:01:29]     "pilotErrorCode": 1305,
[2025-10-11 05:01:29]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 05:01:29]  *** Listing of results directory ***
[2025-10-11 05:01:29] total 218036
[2025-10-11 05:01:29] -rw-r--r--. 1 boinc boinc    557409 Oct 11 02:03 pilot3.tar.gz
[2025-10-11 05:01:29] -rw-r--r--. 1 boinc boinc      5112 Oct 11 02:08 queuedata.json
[2025-10-11 05:01:29] -rwx------. 1 boinc boinc     36292 Oct 11 02:10 runpilot2-wrapper.sh
[2025-10-11 05:01:29] -rw-r--r--. 1 boinc boinc       100 Oct 11 04:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 05:01:29] -rwxr-xr-x. 1 boinc boinc      7986 Oct 11 04:55 run_atlas
[2025-10-11 05:01:29] -rw-r--r--. 1 boinc boinc       105 Oct 11 04:55 job.xml
[2025-10-11 05:01:29] -rw-r--r--. 2 boinc boinc 219133801 Oct 11 04:55 EVNT.46676267._002203.pool.root.1
[2025-10-11 05:01:29] -rw-r--r--. 1 boinc boinc      6594 Oct 11 04:55 init_data.xml
[2025-10-11 05:01:29] -rw-r--r--. 2 boinc boinc     15120 Oct 11 04:55 start_atlas.sh
[2025-10-11 05:01:29] drwxrwx--x. 2 boinc boinc      4096 Oct 11 04:55 shared
[2025-10-11 05:01:29] -rw-r--r--. 2 boinc boinc    569682 Oct 11 04:55 input.tar.gz
[2025-10-11 05:01:29] -rw-r--r--. 1 boinc boinc         0 Oct 11 04:55 boinc_lockfile
[2025-10-11 05:01:29] -rw-r--r--. 1 boinc boinc      2550 Oct 11 04:55 pandaJob.out
[2025-10-11 05:01:29] -rw-------. 1 boinc boinc    975509 Oct 11 04:56 agis_schedconf.cvmfs.json
[2025-10-11 05:01:29] -rw-------. 1 boinc boinc   1560580 Oct 11 04:56 agis_ddmendpoints.agis.ALL.json
[2025-10-11 05:01:29] drwx------. 5 boinc boinc      4096 Oct 11 04:56 pilot3
[2025-10-11 05:01:29] -rw-r--r--. 1 boinc boinc       525 Oct 11 04:58 boinc_task_state.xml
[2025-10-11 05:01:29] -rw-------. 1 boinc boinc       962 Oct 11 04:58 memory_monitor_summary.json
[2025-10-11 05:01:29] -rw-------. 1 boinc boinc     22629 Oct 11 04:58 log.46676269._054936.job.log.tgz.1
[2025-10-11 05:01:29] -rw-------. 1 boinc boinc      8416 Oct 11 05:00 heartbeat.json
[2025-10-11 05:01:29] -rw-------. 1 boinc boinc       823 Oct 11 05:01 pilotlog.txt
[2025-10-11 05:01:29] -rw-------. 1 boinc boinc        95 Oct 11 05:01 pilot_heartbeat.json
[2025-10-11 05:01:29] -rw-r--r--. 1 boinc boinc      8192 Oct 11 05:01 boinc_mmap_file
[2025-10-11 05:01:29] -rw-------. 1 boinc boinc     94699 Oct 11 05:01 log.46676269._054936.job.log.1
[2025-10-11 05:01:29] -rw-------. 1 boinc boinc       188 Oct 11 05:01 output.list
[2025-10-11 05:01:29] -rw-r--r--. 1 boinc boinc       620 Oct 11 05:01 runtime_log
[2025-10-11 05:01:29] -rw-------. 1 boinc boinc    133120 Oct 11 05:01 result.tar.gz
[2025-10-11 05:01:29] -rw-r--r--. 1 boinc boinc      8528 Oct 11 05:01 runtime_log.err
[2025-10-11 05:01:29] -rw-------. 1 boinc boinc       645 Oct 11 05:01 OZTMDmAnkR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKzfNDmzoDPIo.diag
[2025-10-11 05:01:29] -rw-r--r--. 1 boinc boinc        23 Oct 11 05:01 wrapper_checkpoint.txt
[2025-10-11 05:01:29] -rw-r--r--. 1 boinc boinc     21934 Oct 11 05:01 stderr.txt
[2025-10-11 05:01:29] No HITS result produced
[2025-10-11 05:01:29]  *** Contents of shared directory: ***
[2025-10-11 05:01:29] total 214712
[2025-10-11 05:01:29] -rw-r--r--. 2 boinc boinc 219133801 Oct 11 04:55 ATLAS.root_0
[2025-10-11 05:01:29] -rw-r--r--. 2 boinc boinc     15120 Oct 11 04:55 start_atlas.sh
[2025-10-11 05:01:29] -rw-r--r--. 2 boinc boinc    569682 Oct 11 04:55 input.tar.gz
[2025-10-11 05:01:29] -rw-------. 1 boinc boinc    133120 Oct 11 05:01 result.tar.gz
05:01:31 (1702182): run_atlas exited; CPU time 28.846847
05:01:31 (1702182): called boinc_finish(0)

</stderr_txt>
]]>

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