Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:38:32 (5161): wrapper (7.7.26015): starting
07:38:32 (5161): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 07:38:32] Arguments: --nthreads 8
[2025-10-11 07:38:32] Threads: 8
[2025-10-11 07:38:32] Checking for CVMFS
[2025-10-11 07:38:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 07:38:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 07:38:32] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 07:38:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 07:38:33] 2.11.2.0 28294 51407 130164 151583 1 188 9312543 18432001 1824 130560 0 45922119 99.973 2311171 33433 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 07:38:33] CVMFS is ok
[2025-10-11 07:38:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 07:38:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 07:38:33] Further information can be found at the LHC@home message board.
[2025-10-11 07:38:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 07:38:33] Checking for apptainer binary...
[2025-10-11 07:38:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 07:38:33] Running /usr/bin/apptainer --version
[2025-10-11 07:38:33] apptainer version 1.3.2-1.el7
[2025-10-11 07:38:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 07:38:33] c-206-25.aglt2.org
[2025-10-11 07:38:33] apptainer works
[2025-10-11 07:38:33] Set ATHENA_PROC_NUMBER=8
[2025-10-11 07:38:33] Set ATHENA_CORE_NUMBER=8
[2025-10-11 07:38:33] Starting ATLAS job with PandaID=6837875626
[2025-10-11 07:38:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 10:36:07]  *** The last 200 lines of the pilot log: ***
[2025-10-11 10:36:07] 2025-10-11 14:35:03,999 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 10:36:07] 2025-10-11 14:35:03,999 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 10:36:07] 2025-10-11 14:35:04,001 | INFO     | fitting pss+swap vs Time
[2025-10-11 10:36:07] 2025-10-11 14:35:04,002 | INFO     | sum of square deviations: 1605470102.0
[2025-10-11 10:36:07] 2025-10-11 14:35:04,002 | INFO     | sum of deviations: 14182225744.0
[2025-10-11 10:36:07] 2025-10-11 14:35:04,003 | INFO     | mean x: 1760187992.0
[2025-10-11 10:36:07] 2025-10-11 14:35:04,003 | INFO     | mean y: 2486563.0
[2025-10-11 10:36:07] 2025-10-11 14:35:04,003 | INFO     | -- intersect: -15546469112.552073
[2025-10-11 10:36:07] 2025-10-11 14:35:04,003 | INFO     | intersect: -15546469112.552073
[2025-10-11 10:36:07] 2025-10-11 14:35:04,003 | INFO     | chi2: 1.3162913701187604
[2025-10-11 10:36:07] 2025-10-11 14:35:04,003 | INFO     | sum of square deviations: 1470248962.0
[2025-10-11 10:36:07] 2025-10-11 14:35:04,004 | INFO     | sum of deviations: 13673394121.999998
[2025-10-11 10:36:07] 2025-10-11 14:35:04,004 | INFO     | mean x: 1760187839.5
[2025-10-11 10:36:07] 2025-10-11 14:35:04,004 | INFO     | mean y: 2485988.523809524
[2025-10-11 10:36:07] 2025-10-11 14:35:04,005 | INFO     | -- intersect: -16367355229.044876
[2025-10-11 10:36:07] 2025-10-11 14:35:04,005 | INFO     | intersect: -16367355229.044876
[2025-10-11 10:36:07] 2025-10-11 14:35:04,005 | INFO     | chi2: 1.3172828193347692
[2025-10-11 10:36:07] 2025-10-11 14:35:04,005 | INFO     | current chi2=1.3172828193347692 (change=-0.07532140972096076 %)
[2025-10-11 10:36:07] 2025-10-11 14:35:04,005 | INFO     | right removable region: 167
[2025-10-11 10:36:07] 2025-10-11 14:35:04,005 | INFO     | sum of square deviations: 1470248962.0
[2025-10-11 10:36:07] 2025-10-11 14:35:04,006 | INFO     | sum of deviations: -9764848523.999996
[2025-10-11 10:36:07] 2025-10-11 14:35:04,006 | INFO     | mean x: 1760188144.5
[2025-10-11 10:36:07] 2025-10-11 14:35:04,006 | INFO     | mean y: 2513224.4285714286
[2025-10-11 10:36:07] 2025-10-11 14:35:04,006 | INFO     | -- intersect: 11693030306.244486
[2025-10-11 10:36:07] 2025-10-11 14:35:04,007 | INFO     | intersect: 11693030306.244486
[2025-10-11 10:36:07] 2025-10-11 14:35:04,007 | INFO     | chi2: 0.04983791309393044
[2025-10-11 10:36:07] 2025-10-11 14:35:04,007 | INFO     | current chi2=0.04983791309393044 (change=96.21376283205186 %)
[2025-10-11 10:36:07] 2025-10-11 14:35:04,007 | INFO     | sum of square deviations: 1342841922.0
[2025-10-11 10:36:07] 2025-10-11 14:35:04,008 | INFO     | sum of deviations: -10294551173.999996
[2025-10-11 10:36:07] 2025-10-11 14:35:04,008 | INFO     | mean x: 1760188297.0
[2025-10-11 10:36:07] 2025-10-11 14:35:04,008 | INFO     | mean y: 2513810.54601227
[2025-10-11 10:36:07] 2025-10-11 14:35:04,008 | INFO     | -- intersect: 13496543303.1272
[2025-10-11 10:36:07] 2025-10-11 14:35:04,008 | INFO     | intersect: 13496543303.1272
[2025-10-11 10:36:07] 2025-10-11 14:35:04,009 | INFO     | chi2: 0.036524534832378504
[2025-10-11 10:36:07] 2025-10-11 14:35:04,009 | INFO     | current chi2=0.036524534832378504 (change=26.71335422183502 %)
[2025-10-11 10:36:07] 2025-10-11 14:35:04,009 | INFO     | sum of square deviations: 1223016419.5
[2025-10-11 10:36:07] 2025-10-11 14:35:04,010 | INFO     | sum of deviations: -8348311983.500005
[2025-10-11 10:36:07] 2025-10-11 14:35:04,010 | INFO     | mean x: 1760188449.5
[2025-10-11 10:36:07] 2025-10-11 14:35:04,010 | INFO     | mean y: 2511330.246835443
[2025-10-11 10:36:07] 2025-10-11 14:35:04,010 | INFO     | -- intersect: 12017560426.796715
[2025-10-11 10:36:07] 2025-10-11 14:35:04,010 | INFO     | intersect: 12017560426.796715
[2025-10-11 10:36:07] 2025-10-11 14:35:04,010 | INFO     | chi2: 0.035062168605615326
[2025-10-11 10:36:07] 2025-10-11 14:35:04,010 | INFO     | current chi2=0.035062168605615326 (change=4.003791515687722 %)
[2025-10-11 10:36:07] 2025-10-11 14:35:04,011 | INFO     | left removable region: 30
[2025-10-11 10:36:07] 2025-10-11 14:35:04,011 | INFO     | sum of square deviations: 797291228.0
[2025-10-11 10:36:07] 2025-10-11 14:35:04,011 | INFO     | sum of deviations: -1353733532.9999995
[2025-10-11 10:36:07] 2025-10-11 14:35:04,011 | INFO     | mean x: 1760188724.0
[2025-10-11 10:36:07] 2025-10-11 14:35:04,012 | INFO     | mean y: 2500744.7664233577
[2025-10-11 10:36:07] 2025-10-11 14:35:04,012 | INFO     | -- intersect: 2991153342.970202
[2025-10-11 10:36:07] 2025-10-11 14:35:04,012 | INFO     | intersect: 2991153342.970202
[2025-10-11 10:36:07] 2025-10-11 14:35:04,012 | INFO     | chi2: 0.01857153149544278
[2025-10-11 10:36:07] 2025-10-11 14:35:04,012 | INFO     | -- intersect: 2991153342.970202
[2025-10-11 10:36:07] 2025-10-11 14:35:04,012 | INFO     | current memory leak: -1.70 B/s (using 137 data points, chi2=0.02)
[2025-10-11 10:36:07] 2025-10-11 14:35:04,013 | INFO     | could have reported an average CPU frequency of 2426 MHz (9 samples)
[2025-10-11 10:36:07] 2025-10-11 14:35:04,013 | INFO     | ..............................
[2025-10-11 10:36:07] 2025-10-11 14:35:04,013 | INFO     | . Timing measurements:
[2025-10-11 10:36:07] 2025-10-11 14:35:04,013 | INFO     | . get job = 0 s
[2025-10-11 10:36:07] 2025-10-11 14:35:04,013 | INFO     | . initial setup = 2 s
[2025-10-11 10:36:07] 2025-10-11 14:35:04,013 | INFO     | . payload setup = 4 s
[2025-10-11 10:36:07] 2025-10-11 14:35:04,013 | INFO     | . stage-in = 0 s
[2025-10-11 10:36:07] 2025-10-11 14:35:04,013 | INFO     | . payload execution = 10554 s
[2025-10-11 10:36:07] 2025-10-11 14:35:04,013 | INFO     | . stage-out = 0 s
[2025-10-11 10:36:07] 2025-10-11 14:35:04,013 | INFO     | . log creation = 0 s
[2025-10-11 10:36:07] 2025-10-11 14:35:04,014 | INFO     | ..............................
[2025-10-11 10:36:07] 2025-10-11 14:35:04,112 | INFO     | 
[2025-10-11 10:36:07] 2025-10-11 14:35:04,112 | INFO     | job summary report
[2025-10-11 10:36:07] 2025-10-11 14:35:04,112 | INFO     | --------------------------------------------------
[2025-10-11 10:36:07] 2025-10-11 14:35:04,112 | INFO     | PanDA job id: 6837875626
[2025-10-11 10:36:07] 2025-10-11 14:35:04,113 | INFO     | task id: 46676269
[2025-10-11 10:36:07] 2025-10-11 14:35:04,113 | INFO     | errors: (none)
[2025-10-11 10:36:07] 2025-10-11 14:35:04,113 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 10:36:07] 2025-10-11 14:35:04,113 | INFO     | pilot state: finished 
[2025-10-11 10:36:07] 2025-10-11 14:35:04,113 | INFO     | transexitcode: 0
[2025-10-11 10:36:07] 2025-10-11 14:35:04,113 | INFO     | exeerrorcode: 0
[2025-10-11 10:36:07] 2025-10-11 14:35:04,113 | INFO     | exeerrordiag: 
[2025-10-11 10:36:07] 2025-10-11 14:35:04,113 | INFO     | exitcode: 0
[2025-10-11 10:36:07] 2025-10-11 14:35:04,113 | INFO     | exitmsg: OK
[2025-10-11 10:36:07] 2025-10-11 14:35:04,113 | INFO     | cpuconsumptiontime: 80001 s
[2025-10-11 10:36:07] 2025-10-11 14:35:04,113 | INFO     | nevents: 400
[2025-10-11 10:36:07] 2025-10-11 14:35:04,114 | INFO     | neventsw: 0
[2025-10-11 10:36:07] 2025-10-11 14:35:04,114 | INFO     | pid: 15293
[2025-10-11 10:36:07] 2025-10-11 14:35:04,114 | INFO     | pgrp: 15293
[2025-10-11 10:36:07] 2025-10-11 14:35:04,114 | INFO     | corecount: 8
[2025-10-11 10:36:07] 2025-10-11 14:35:04,114 | INFO     | event service: False
[2025-10-11 10:36:07] 2025-10-11 14:35:04,114 | INFO     | sizes: {0: 2348857, 3: 2349119, 11: 2349147, 10561: 2378034, 10562: 2387087, 10566: 2387289}
[2025-10-11 10:36:07] 2025-10-11 14:35:04,114 | INFO     | --------------------------------------------------
[2025-10-11 10:36:07] 2025-10-11 14:35:04,114 | INFO     | 
[2025-10-11 10:36:07] 2025-10-11 14:35:04,114 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-11 10:36:07] 2025-10-11 14:35:04,129 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 10:36:07] 2025-10-11 14:35:04,129 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 10:36:07] 2025-10-11 14:35:04,129 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 10:36:07] 2025-10-11 14:35:04,129 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 10:36:07] 2025-10-11 14:35:04,129 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 10:36:07] 2025-10-11 14:35:04,129 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 10:36:07] 2025-10-11 14:35:04,130 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 10:36:07] 2025-10-11 14:35:04,130 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 10:36:07] 2025-10-11 14:35:04,130 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 10:36:07] 2025-10-11 14:35:04,130 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 10:36:07] 2025-10-11 14:35:04,130 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 10:36:07] 2025-10-11 14:35:04,130 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 10:36:07] 2025-10-11 14:35:04,130 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 10:36:07] 2025-10-11 14:35:04,130 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 10:36:07] 2025-10-11 14:35:04,130 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 10:36:07] 2025-10-11 14:35:04,131 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 10:36:07] 2025-10-11 14:35:04,131 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 10:36:07] 2025-10-11 14:35:04,131 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 10:36:07] 2025-10-11 14:35:04,131 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 10:36:07] 2025-10-11 14:35:04,131 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 10:36:07] 2025-10-11 14:35:04,131 | INFO     | job 6837875626 has completed (purged errors)
[2025-10-11 10:36:07] 2025-10-11 14:35:04,131 | INFO     | overall cleanup function is called
[2025-10-11 10:36:07] 2025-10-11 14:35:05,138 | INFO     | --- collectZombieJob: --- 10, [15293]
[2025-10-11 10:36:07] 2025-10-11 14:35:05,139 | INFO     | zombie collector waiting for pid 15293
[2025-10-11 10:36:07] 2025-10-11 14:35:05,139 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 10:36:07] 2025-10-11 14:35:05,139 | INFO     | collected zombie processes
[2025-10-11 10:36:07] 2025-10-11 14:35:05,139 | INFO     | will attempt to kill all subprocesses of pid=15293
[2025-10-11 10:36:07] 2025-10-11 14:35:05,257 | INFO     | process IDs to be killed: [15293] (in reverse order)
[2025-10-11 10:36:07] 2025-10-11 14:35:05,295 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 10:36:07] 2025-10-11 14:35:05,295 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 10:36:07] 2025-10-11 14:35:05,297 | INFO     | did not find any defunct processes belonging to 15293
[2025-10-11 10:36:07] 2025-10-11 14:35:05,300 | INFO     | did not find any defunct processes belonging to 15293
[2025-10-11 10:36:07] 2025-10-11 14:35:05,300 | INFO     | ready for new job
[2025-10-11 10:36:07] 2025-10-11 14:35:05,300 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 10:36:07] 2025-10-11 14:35:05,301 | INFO     | ***************************************
[2025-10-11 10:36:07] 2025-10-11 14:35:05,301 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 10:36:07] 2025-10-11 14:35:05,302 | INFO     | ***************************************
[2025-10-11 10:36:07] 2025-10-11 14:35:05,302 | INFO     | 
[2025-10-11 10:36:07] 2025-10-11 14:35:05,303 | INFO     | architecture information:
[2025-10-11 10:36:07] 2025-10-11 14:35:05,303 | INFO     | executing command: cat /etc/os-release
[2025-10-11 10:36:07] 2025-10-11 14:35:05,314 | INFO     | cat /etc/os-release:
[2025-10-11 10:36:07] NAME="CentOS Linux"
[2025-10-11 10:36:07] VERSION="7 (Core)"
[2025-10-11 10:36:07] ID="centos"
[2025-10-11 10:36:07] ID_LIKE="rhel fedora"
[2025-10-11 10:36:07] VERSION_ID="7"
[2025-10-11 10:36:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 10:36:07] ANSI_COLOR="0;31"
[2025-10-11 10:36:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 10:36:07] HOME_URL="https://www.centos.org/"
[2025-10-11 10:36:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 10:36:07] 
[2025-10-11 10:36:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 10:36:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 10:36:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 10:36:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 10:36:07] 
[2025-10-11 10:36:07] 2025-10-11 14:35:05,314 | INFO     | ***************************************
[2025-10-11 10:36:07] 2025-10-11 14:35:05,817 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-11 10:36:07] 2025-10-11 14:35:05,830 | INFO     | sufficient remaining disk space (28308406272 B)
[2025-10-11 10:36:07] 2025-10-11 14:35:05,830 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 10:36:07] 2025-10-11 14:35:05,830 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 10:36:07] 2025-10-11 14:35:05,831 | INFO     | update_server=False
[2025-10-11 10:36:07] 2025-10-11 14:35:05,831 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 10:36:07] 2025-10-11 14:35:05,831 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 10:36:07] 2025-10-11 14:35:05,831 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 10:36:07] 2025-10-11 14:35:05,888 | INFO     | all payload control threads have been joined
[2025-10-11 10:36:07] 2025-10-11 14:35:06,122 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 10:36:07] 2025-10-11 14:35:06,122 | INFO     | aborting loop
[2025-10-11 10:36:07] 2025-10-11 14:35:06,284 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 10:36:07] 2025-10-11 14:35:06,381 | INFO     | all data control threads have been joined
[2025-10-11 10:36:07] 2025-10-11 14:35:06,642 | INFO     | all job control threads have been joined
[2025-10-11 10:36:07] 2025-10-11 14:35:06,836 | INFO     | [job] retrieve thread has finished
[2025-10-11 10:36:07] 2025-10-11 14:35:06,836 | INFO     | [job] queue monitor thread has finished
[2025-10-11 10:36:07] 2025-10-11 14:35:06,847 | INFO     | [payload] validate_post thread has finished
[2025-10-11 10:36:07] 2025-10-11 14:35:06,893 | INFO     | [payload] control thread has finished
[2025-10-11 10:36:07] 2025-10-11 14:35:07,016 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 10:36:07] 2025-10-11 14:35:07,127 | INFO     | [job] job monitor thread has finished
[2025-10-11 10:36:07] 2025-10-11 14:35:07,203 | INFO     | [payload] failed_post thread has finished
[2025-10-11 10:36:07] 2025-10-11 14:35:07,386 | INFO     | [data] control thread has finished
[2025-10-11 10:36:07] 2025-10-11 14:35:07,585 | INFO     | [job] validate thread has finished
[2025-10-11 10:36:07] 2025-10-11 14:35:07,647 | INFO     | [job] control thread has finished
[2025-10-11 10:36:07] 2025-10-11 14:35:07,741 | INFO     | [data] copytool_in thread has finished
[2025-10-11 10:36:07] 2025-10-11 14:35:07,837 | INFO     | [data] copytool_out thread has finished
[2025-10-11 10:36:07] 2025-10-11 14:35:07,876 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 10:36:07] 2025-10-11 14:35:07,909 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 10:36:07] 2025-10-11 14:35:10,290 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 10:36:07] 2025-10-11 14:35:16,269 | INFO     | job.realtimelogging is not enabled
[2025-10-11 10:36:07] 2025-10-11 14:35:17,274 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 10:36:07] 2025-10-11 14:35:35,811 | INFO     | PID=8932 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-11 10:36:07] 2025-10-11 14:35:35,811 | INFO     | .. there are 3 such processes running
[2025-10-11 10:36:07] 2025-10-11 14:35:35,812 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 10:36:07] 2025-10-11 14:35:35,812 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 10:36:07] 2025-10-11 14:35:35,812 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 10:36:07] 2025-10-11 14:36:00,190 | INFO     | [monitor] cgroup control has ended
[2025-10-11 10:36:07] 2025-10-11 14:36:01,887 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140497363507008)>', '<ExcThread(monitor, started 140496550745856)>']
[2025-10-11 10:36:07] 2025-10-11 14:36:01,939 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 10:36:07] 2025-10-11 14:36:01,940 | INFO     | [monitor] control thread has ended
[2025-10-11 10:36:07] 2025-10-11 14:36:06,912 | INFO     | all workflow threads have been joined
[2025-10-11 10:36:07] 2025-10-11 14:36:06,912 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 10:36:07] 2025-10-11 14:36:06,912 | INFO     | traces error code: 0
[2025-10-11 10:36:07] 2025-10-11 14:36:06,912 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 10:36:07] 2025-10-11 14:36:07,001 [wrapper] ==== pilot stdout END ====
[2025-10-11 10:36:07] 2025-10-11 14:36:07,003 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 10:36:07] 2025-10-11 14:36:07,005 [wrapper] pilotpid: 8932
[2025-10-11 10:36:07] 2025-10-11 14:36:07,007 [wrapper] Pilot exit status: 0
[2025-10-11 10:36:07] 2025-10-11 14:36:07,015 [wrapper] pandaids: 6837875626
[2025-10-11 10:36:07] 2025-10-11 14:36:07,043 [wrapper] cleanup supervisor_pilot  5768 8933
[2025-10-11 10:36:07] 2025-10-11 14:36:07,046 [wrapper] Test setup, not cleaning
[2025-10-11 10:36:07] 2025-10-11 14:36:07,048 [wrapper] apfmon messages muted
[2025-10-11 10:36:07] 2025-10-11 14:36:07,049 [wrapper] ==== wrapper stdout END ====
[2025-10-11 10:36:07] 2025-10-11 14:36:07,051 [wrapper] ==== wrapper stderr END ====
[2025-10-11 10:36:07]  *** Error codes and diagnostics ***
[2025-10-11 10:36:07]     "exeErrorCode": 0,
[2025-10-11 10:36:07]     "exeErrorDiag": "",
[2025-10-11 10:36:07]     "pilotErrorCode": 0,
[2025-10-11 10:36:07]     "pilotErrorDiag": "",
[2025-10-11 10:36:07]  *** Listing of results directory ***
[2025-10-11 10:36:07] total 411716
[2025-10-11 10:36:07] -rw-r--r-- 1 boincer umatlas    557409 Oct 10 20:00 pilot3.tar.gz
[2025-10-11 10:36:07] -rw-r--r-- 1 boincer umatlas      5112 Oct 10 20:13 queuedata.json
[2025-10-11 10:36:07] -rwx------ 1 boincer umatlas     36292 Oct 10 20:14 runpilot2-wrapper.sh
[2025-10-11 10:36:07] -rw-r--r-- 1 boincer umatlas       100 Oct 11 07:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 10:36:07] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 07:38 run_atlas
[2025-10-11 10:36:07] -rw-r--r-- 1 boincer umatlas       105 Oct 11 07:38 job.xml
[2025-10-11 10:36:07] -rw-r--r-- 2 boincer umatlas 222375524 Oct 11 07:38 EVNT.46676267._001921.pool.root.1
[2025-10-11 10:36:07] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 07:38 start_atlas.sh
[2025-10-11 10:36:07] drwxrwx--x 2 boincer umatlas      4096 Oct 11 07:38 shared
[2025-10-11 10:36:07] -rw-r--r-- 2 boincer umatlas    569684 Oct 11 07:38 input.tar.gz
[2025-10-11 10:36:07] -rw-r--r-- 1 boincer umatlas         0 Oct 11 07:38 boinc_lockfile
[2025-10-11 10:36:07] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 07:38 pandaJob.out
[2025-10-11 10:36:07] -rw------- 1 boincer umatlas    975509 Oct 11 07:38 agis_schedconf.cvmfs.json
[2025-10-11 10:36:07] -rw------- 1 boincer umatlas   1560580 Oct 11 07:38 agis_ddmendpoints.agis.ALL.json
[2025-10-11 10:36:07] drwx------ 5 boincer umatlas      4096 Oct 11 07:38 pilot3
[2025-10-11 10:36:07] -rw-r--r-- 1 boincer umatlas      5951 Oct 11 10:28 init_data.xml
[2025-10-11 10:36:07] -rw------- 1 boincer umatlas 191509778 Oct 11 10:34 HITS.46676269._047580.pool.root.1
[2025-10-11 10:36:07] -rw-r--r-- 1 boincer umatlas       531 Oct 11 10:34 boinc_task_state.xml
[2025-10-11 10:36:07] -rw------- 1 boincer umatlas      1054 Oct 11 10:34 memory_monitor_summary.json
[2025-10-11 10:36:07] -rw------- 1 boincer umatlas    421573 Oct 11 10:34 log.46676269._047580.job.log.tgz.1
[2025-10-11 10:36:07] -rw------- 1 boincer umatlas      7858 Oct 11 10:35 heartbeat.json
[2025-10-11 10:36:07] -rw------- 1 boincer umatlas        95 Oct 11 10:35 pilot_heartbeat.json
[2025-10-11 10:36:07] -rw-r--r-- 1 boincer umatlas        28 Oct 11 10:35 wrapper_checkpoint.txt
[2025-10-11 10:36:07] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 10:35 boinc_mmap_file
[2025-10-11 10:36:07] -rw------- 1 boincer umatlas      4892 Oct 11 10:36 pilotlog.txt
[2025-10-11 10:36:07] -rw------- 1 boincer umatlas   1486645 Oct 11 10:36 log.46676269._047580.job.log.1
[2025-10-11 10:36:07] -rw------- 1 boincer umatlas       357 Oct 11 10:36 output.list
[2025-10-11 10:36:07] -rw-r--r-- 1 boincer umatlas       620 Oct 11 10:36 runtime_log
[2025-10-11 10:36:07] -rw------- 1 boincer umatlas   1925120 Oct 11 10:36 result.tar.gz
[2025-10-11 10:36:07] -rw-r--r-- 1 boincer umatlas      8704 Oct 11 10:36 runtime_log.err
[2025-10-11 10:36:07] -rw------- 1 boincer umatlas       660 Oct 11 10:36 6MGMDmwQcR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCqeNDmcMvh0n.diag
[2025-10-11 10:36:07] -rw-r--r-- 1 boincer umatlas     20845 Oct 11 10:36 stderr.txt
[2025-10-11 10:36:07] HITS file was successfully produced:
[2025-10-11 10:36:07] -rw------- 1 boincer umatlas 191509778 Oct 11 10:34 shared/HITS.pool.root.1
[2025-10-11 10:36:07]  *** Contents of shared directory: ***
[2025-10-11 10:36:07] total 406648
[2025-10-11 10:36:07] -rw-r--r-- 2 boincer umatlas 222375524 Oct 11 07:38 ATLAS.root_0
[2025-10-11 10:36:07] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 07:38 start_atlas.sh
[2025-10-11 10:36:07] -rw-r--r-- 2 boincer umatlas    569684 Oct 11 07:38 input.tar.gz
[2025-10-11 10:36:07] -rw------- 1 boincer umatlas 191509778 Oct 11 10:34 HITS.pool.root.1
[2025-10-11 10:36:07] -rw------- 1 boincer umatlas   1925120 Oct 11 10:36 result.tar.gz
10:36:08 (5161): run_atlas exited; CPU time 80112.698651
10:36:08 (5161): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN