Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:14:04 (4102129): wrapper (7.7.26015): starting
21:14:04 (4102129): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 21:14:04] Arguments: --nthreads 4
[2025-10-12 21:14:04] Threads: 4
[2025-10-12 21:14:04] Checking for CVMFS
[2025-10-12 21:14:04] No cvmfs_config command found, will try listing directly
[2025-10-12 21:14:04] CVMFS is ok
[2025-10-12 21:14:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 21:14:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 21:14:04] Further information can be found at the LHC@home message board.
[2025-10-12 21:14:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 21:14:04] Checking for apptainer binary...
[2025-10-12 21:14:04] which: no apptainer in ((null))
[2025-10-12 21:14:04] apptainer is not installed, using version from CVMFS
[2025-10-12 21:14:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 21:14:04] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2025-10-12 21:14:04] apptainer works
[2025-10-12 21:14:04] Set ATHENA_PROC_NUMBER=4
[2025-10-12 21:14:04] Set ATHENA_CORE_NUMBER=4
[2025-10-12 21:14:04] Starting ATLAS job with PandaID=6838001277
[2025-10-12 21:14:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 00:13:59]  *** The last 200 lines of the pilot log: ***
[2025-10-13 00:13:59] 2025-10-12 22:13:00,982 | INFO     | fitting pss+swap vs Time
[2025-10-13 00:13:59] 2025-10-12 22:13:00,983 | INFO     | sum of square deviations: 1690450300.0
[2025-10-13 00:13:59] 2025-10-12 22:13:00,984 | INFO     | sum of deviations: 9656512768.0
[2025-10-13 00:13:59] 2025-10-12 22:13:00,984 | INFO     | mean x: 1760301819.5
[2025-10-13 00:13:59] 2025-10-12 22:13:00,984 | INFO     | mean y: 2310695.0454545454
[2025-10-13 00:13:59] 2025-10-12 22:13:00,984 | INFO     | -- intersect: -10053221251.404188
[2025-10-13 00:13:59] 2025-10-12 22:13:00,984 | INFO     | intersect: -10053221251.404188
[2025-10-13 00:13:59] 2025-10-12 22:13:00,984 | INFO     | chi2: 1.8559678469748708
[2025-10-13 00:13:59] 2025-10-12 22:13:00,985 | INFO     | sum of square deviations: 1550429070.0
[2025-10-13 00:13:59] 2025-10-12 22:13:00,986 | INFO     | sum of deviations: 19120565046.000004
[2025-10-13 00:13:59] 2025-10-12 22:13:00,986 | INFO     | mean x: 1760301667.0
[2025-10-13 00:13:59] 2025-10-12 22:13:00,986 | INFO     | mean y: 2320749.730994152
[2025-10-13 00:13:59] 2025-10-12 22:13:00,986 | INFO     | -- intersect: -21706484364.749825
[2025-10-13 00:13:59] 2025-10-12 22:13:00,986 | INFO     | intersect: -21706484364.749825
[2025-10-13 00:13:59] 2025-10-12 22:13:00,986 | INFO     | chi2: 1.1953249334343174
[2025-10-13 00:13:59] 2025-10-12 22:13:00,986 | INFO     | current chi2=1.1953249334343174 (change=35.59560121784256 %)
[2025-10-13 00:13:59] 2025-10-12 22:13:00,987 | INFO     | sum of square deviations: 1418361477.5
[2025-10-13 00:13:59] 2025-10-12 22:13:00,988 | INFO     | sum of deviations: 18209123145.5
[2025-10-13 00:13:59] 2025-10-12 22:13:00,988 | INFO     | mean x: 1760301514.5
[2025-10-13 00:13:59] 2025-10-12 22:13:00,988 | INFO     | mean y: 2319697.138554217
[2025-10-13 00:13:59] 2025-10-12 22:13:00,988 | INFO     | -- intersect: -22596677497.312996
[2025-10-13 00:13:59] 2025-10-12 22:13:00,988 | INFO     | intersect: -22596677497.312996
[2025-10-13 00:13:59] 2025-10-12 22:13:00,988 | INFO     | chi2: 1.1961695887868378
[2025-10-13 00:13:59] 2025-10-12 22:13:00,988 | INFO     | current chi2=1.1961695887868378 (change=-0.07066324217746535 %)
[2025-10-13 00:13:59] 2025-10-12 22:13:00,988 | INFO     | right removable region: 165
[2025-10-13 00:13:59] 2025-10-12 22:13:00,989 | INFO     | sum of square deviations: 1550429070.0
[2025-10-13 00:13:59] 2025-10-12 22:13:00,990 | INFO     | sum of deviations: -6297008162.0
[2025-10-13 00:13:59] 2025-10-12 22:13:00,990 | INFO     | mean x: 1760301972.0
[2025-10-13 00:13:59] 2025-10-12 22:13:00,990 | INFO     | mean y: 2327674.7192982454
[2025-10-13 00:13:59] 2025-10-12 22:13:00,990 | INFO     | -- intersect: 7151726573.224662
[2025-10-13 00:13:59] 2025-10-12 22:13:00,990 | INFO     | intersect: 7151726573.224662
[2025-10-13 00:13:59] 2025-10-12 22:13:00,990 | INFO     | chi2: 0.6996066136819884
[2025-10-13 00:13:59] 2025-10-12 22:13:00,991 | INFO     | current chi2=0.6996066136819884 (change=62.30502512086563 %)
[2025-10-13 00:13:59] 2025-10-12 22:13:00,991 | INFO     | sum of square deviations: 1418361477.5
[2025-10-13 00:13:59] 2025-10-12 22:13:00,992 | INFO     | sum of deviations: -4544726584.5
[2025-10-13 00:13:59] 2025-10-12 22:13:00,992 | INFO     | mean x: 1760302124.5
[2025-10-13 00:13:59] 2025-10-12 22:13:00,992 | INFO     | mean y: 2325704.234939759
[2025-10-13 00:13:59] 2025-10-12 22:13:00,992 | INFO     | -- intersect: 5642701580.818896
[2025-10-13 00:13:59] 2025-10-12 22:13:00,992 | INFO     | intersect: 5642701580.818896
[2025-10-13 00:13:59] 2025-10-12 22:13:00,992 | INFO     | chi2: 0.6806098757143355
[2025-10-13 00:13:59] 2025-10-12 22:13:00,993 | INFO     | current chi2=0.6806098757143355 (change=2.7153456808640177 %)
[2025-10-13 00:13:59] 2025-10-12 22:13:00,993 | INFO     | left removable region: 20
[2025-10-13 00:13:59] 2025-10-12 22:13:00,993 | INFO     | sum of square deviations: 945282840.0
[2025-10-13 00:13:59] 2025-10-12 22:13:00,994 | INFO     | sum of deviations: 3009904578.0
[2025-10-13 00:13:59] 2025-10-12 22:13:00,994 | INFO     | mean x: 1760302094.0
[2025-10-13 00:13:59] 2025-10-12 22:13:00,994 | INFO     | mean y: 2337929.3034482757
[2025-10-13 00:13:59] 2025-10-12 22:13:00,994 | INFO     | -- intersect: -5602694879.071224
[2025-10-13 00:13:59] 2025-10-12 22:13:00,994 | INFO     | intersect: -5602694879.071224
[2025-10-13 00:13:59] 2025-10-12 22:13:00,994 | INFO     | chi2: 0.0007633210840159154
[2025-10-13 00:13:59] 2025-10-12 22:13:00,994 | INFO     | -- intersect: -5602694879.071224
[2025-10-13 00:13:59] 2025-10-12 22:13:00,995 | INFO     | current memory leak: 3.18 B/s (using 145 data points, chi2=0.00)
[2025-10-13 00:13:59] 2025-10-12 22:13:00,995 | INFO     | could have reported an average CPU frequency of 2678 MHz (9 samples)
[2025-10-13 00:13:59] 2025-10-12 22:13:00,995 | INFO     | ..............................
[2025-10-13 00:13:59] 2025-10-12 22:13:00,995 | INFO     | . Timing measurements:
[2025-10-13 00:13:59] 2025-10-12 22:13:00,996 | INFO     | . get job = 0 s
[2025-10-13 00:13:59] 2025-10-12 22:13:00,996 | INFO     | . initial setup = 1 s
[2025-10-13 00:13:59] 2025-10-12 22:13:00,996 | INFO     | . payload setup = 5 s
[2025-10-13 00:13:59] 2025-10-12 22:13:00,996 | INFO     | . stage-in = 0 s
[2025-10-13 00:13:59] 2025-10-12 22:13:00,996 | INFO     | . payload execution = 10693 s
[2025-10-13 00:13:59] 2025-10-12 22:13:00,996 | INFO     | . stage-out = 0 s
[2025-10-13 00:13:59] 2025-10-12 22:13:00,996 | INFO     | . log creation = 0 s
[2025-10-13 00:13:59] 2025-10-12 22:13:00,996 | INFO     | ..............................
[2025-10-13 00:13:59] 2025-10-12 22:13:01,461 | INFO     | 
[2025-10-13 00:13:59] 2025-10-12 22:13:01,461 | INFO     | job summary report
[2025-10-13 00:13:59] 2025-10-12 22:13:01,461 | INFO     | --------------------------------------------------
[2025-10-13 00:13:59] 2025-10-12 22:13:01,461 | INFO     | PanDA job id: 6838001277
[2025-10-13 00:13:59] 2025-10-12 22:13:01,461 | INFO     | task id: 46676269
[2025-10-13 00:13:59] 2025-10-12 22:13:01,461 | INFO     | errors: (none)
[2025-10-13 00:13:59] 2025-10-12 22:13:01,461 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 00:13:59] 2025-10-12 22:13:01,462 | INFO     | pilot state: finished 
[2025-10-13 00:13:59] 2025-10-12 22:13:01,462 | INFO     | transexitcode: 0
[2025-10-13 00:13:59] 2025-10-12 22:13:01,462 | INFO     | exeerrorcode: 0
[2025-10-13 00:13:59] 2025-10-12 22:13:01,462 | INFO     | exeerrordiag: 
[2025-10-13 00:13:59] 2025-10-12 22:13:01,462 | INFO     | exitcode: 0
[2025-10-13 00:13:59] 2025-10-12 22:13:01,462 | INFO     | exitmsg: OK
[2025-10-13 00:13:59] 2025-10-12 22:13:01,462 | INFO     | cpuconsumptiontime: 41129 s
[2025-10-13 00:13:59] 2025-10-12 22:13:01,462 | INFO     | nevents: 400
[2025-10-13 00:13:59] 2025-10-12 22:13:01,462 | INFO     | neventsw: 0
[2025-10-13 00:13:59] 2025-10-12 22:13:01,463 | INFO     | pid: 4113163
[2025-10-13 00:13:59] 2025-10-12 22:13:01,463 | INFO     | pgrp: 4113163
[2025-10-13 00:13:59] 2025-10-12 22:13:01,463 | INFO     | corecount: 4
[2025-10-13 00:13:59] 2025-10-12 22:13:01,463 | INFO     | event service: False
[2025-10-13 00:13:59] 2025-10-12 22:13:01,463 | INFO     | sizes: {0: 2348646, 1: 2348845, 5: 2349107, 11: 2349163, 10702: 2378241, 10703: 2387445, 10708: 2387647}
[2025-10-13 00:13:59] 2025-10-12 22:13:01,463 | INFO     | --------------------------------------------------
[2025-10-13 00:13:59] 2025-10-12 22:13:01,463 | INFO     | 
[2025-10-13 00:13:59] 2025-10-12 22:13:01,463 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2025-10-13 00:13:59] 2025-10-12 22:13:01,489 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 00:13:59] 2025-10-12 22:13:01,489 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 00:13:59] 2025-10-12 22:13:01,489 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 00:13:59] 2025-10-12 22:13:01,489 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 00:13:59] 2025-10-12 22:13:01,490 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 00:13:59] 2025-10-12 22:13:01,490 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 00:13:59] 2025-10-12 22:13:01,490 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 00:13:59] 2025-10-12 22:13:01,490 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 00:13:59] 2025-10-12 22:13:01,490 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 00:13:59] 2025-10-12 22:13:01,490 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 00:13:59] 2025-10-12 22:13:01,490 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 00:13:59] 2025-10-12 22:13:01,490 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 00:13:59] 2025-10-12 22:13:01,490 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 00:13:59] 2025-10-12 22:13:01,490 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 00:13:59] 2025-10-12 22:13:01,490 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 00:13:59] 2025-10-12 22:13:01,491 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 00:13:59] 2025-10-12 22:13:01,491 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 00:13:59] 2025-10-12 22:13:01,491 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 00:13:59] 2025-10-12 22:13:01,491 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 00:13:59] 2025-10-12 22:13:01,491 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 00:13:59] 2025-10-12 22:13:01,491 | INFO     | job 6838001277 has completed (purged errors)
[2025-10-13 00:13:59] 2025-10-12 22:13:01,491 | INFO     | overall cleanup function is called
[2025-10-13 00:13:59] 2025-10-12 22:13:01,704 | INFO     | PID=4106230 has CPU usage=14.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-13 00:13:59] 2025-10-12 22:13:01,704 | INFO     | .. there are 5 such processes running
[2025-10-13 00:13:59] 2025-10-12 22:13:02,501 | INFO     | --- collectZombieJob: --- 10, [4113163]
[2025-10-13 00:13:59] 2025-10-12 22:13:02,501 | INFO     | zombie collector waiting for pid 4113163
[2025-10-13 00:13:59] 2025-10-12 22:13:02,501 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 00:13:59] 2025-10-12 22:13:02,501 | INFO     | collected zombie processes
[2025-10-13 00:13:59] 2025-10-12 22:13:02,501 | INFO     | will attempt to kill all subprocesses of pid=4113163
[2025-10-13 00:13:59] 2025-10-12 22:13:02,852 | INFO     | process IDs to be killed: [4113163] (in reverse order)
[2025-10-13 00:13:59] 2025-10-12 22:13:02,966 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 00:13:59] 2025-10-12 22:13:02,966 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 00:13:59] 2025-10-12 22:13:02,979 | INFO     | did not find any defunct processes belonging to 4113163
[2025-10-13 00:13:59] 2025-10-12 22:13:02,991 | INFO     | did not find any defunct processes belonging to 4113163
[2025-10-13 00:13:59] 2025-10-12 22:13:02,991 | INFO     | ready for new job
[2025-10-13 00:13:59] 2025-10-12 22:13:02,992 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 00:13:59] 2025-10-12 22:13:02,994 | INFO     | ***************************************
[2025-10-13 00:13:59] 2025-10-12 22:13:02,994 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 00:13:59] 2025-10-12 22:13:02,994 | INFO     | ***************************************
[2025-10-13 00:13:59] 2025-10-12 22:13:02,994 | INFO     | 
[2025-10-13 00:13:59] 2025-10-12 22:13:02,998 | INFO     | architecture information:
[2025-10-13 00:13:59] 2025-10-12 22:13:02,999 | INFO     | executing command: cat /etc/os-release
[2025-10-13 00:13:59] 2025-10-12 22:13:03,016 | INFO     | cat /etc/os-release:
[2025-10-13 00:13:59] NAME="CentOS Linux"
[2025-10-13 00:13:59] VERSION="7 (Core)"
[2025-10-13 00:13:59] ID="centos"
[2025-10-13 00:13:59] ID_LIKE="rhel fedora"
[2025-10-13 00:13:59] VERSION_ID="7"
[2025-10-13 00:13:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 00:13:59] ANSI_COLOR="0;31"
[2025-10-13 00:13:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 00:13:59] HOME_URL="https://www.centos.org/"
[2025-10-13 00:13:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 00:13:59] 
[2025-10-13 00:13:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 00:13:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 00:13:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 00:13:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 00:13:59] 
[2025-10-13 00:13:59] 2025-10-12 22:13:03,016 | INFO     | ***************************************
[2025-10-13 00:13:59] 2025-10-12 22:13:03,519 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2025-10-13 00:13:59] 2025-10-12 22:13:03,537 | INFO     | sufficient remaining disk space (695020290048 B)
[2025-10-13 00:13:59] 2025-10-12 22:13:03,537 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 00:13:59] 2025-10-12 22:13:03,538 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 00:13:59] 2025-10-12 22:13:03,538 | INFO     | update_server=False
[2025-10-13 00:13:59] 2025-10-12 22:13:03,538 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 00:13:59] 2025-10-12 22:13:03,538 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:13:59] 2025-10-12 22:13:03,538 | INFO     | aborting loop
[2025-10-13 00:13:59] 2025-10-12 22:13:03,897 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 00:13:59] 2025-10-12 22:13:04,290 | INFO     | all payload control threads have been joined
[2025-10-13 00:13:59] 2025-10-12 22:13:04,510 | INFO     | all data control threads have been joined
[2025-10-13 00:13:59] 2025-10-12 22:13:04,543 | INFO     | [job] job monitor thread has finished
[2025-10-13 00:13:59] 2025-10-12 22:13:04,543 | INFO     | [job] retrieve thread has finished
[2025-10-13 00:13:59] 2025-10-12 22:13:04,591 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 00:13:59] 2025-10-12 22:13:04,759 | INFO     | [payload] failed_post thread has finished
[2025-10-13 00:13:59] 2025-10-12 22:13:04,777 | INFO     | all job control threads have been joined
[2025-10-13 00:13:59] 2025-10-12 22:13:04,854 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 00:13:59] 2025-10-12 22:13:05,296 | INFO     | [payload] control thread has finished
[2025-10-13 00:13:59] 2025-10-12 22:13:05,438 | INFO     | [job] validate thread has finished
[2025-10-13 00:13:59] 2025-10-12 22:13:05,499 | INFO     | [payload] validate_post thread has finished
[2025-10-13 00:13:59] 2025-10-12 22:13:05,516 | INFO     | [data] control thread has finished
[2025-10-13 00:13:59] 2025-10-12 22:13:05,778 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 00:13:59] 2025-10-12 22:13:05,783 | INFO     | [job] control thread has finished
[2025-10-13 00:13:59] 2025-10-12 22:13:05,821 | INFO     | [data] copytool_in thread has finished
[2025-10-13 00:13:59] 2025-10-12 22:13:05,902 | INFO     | [data] copytool_out thread has finished
[2025-10-13 00:13:59] 2025-10-12 22:13:06,107 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:13:59] 2025-10-12 22:13:06,674 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 00:13:59] 2025-10-12 22:13:07,110 | INFO     | [job] queue monitor thread has finished
[2025-10-13 00:13:59] 2025-10-12 22:13:10,680 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 00:13:59] 2025-10-12 22:13:13,899 | INFO     | job.realtimelogging is not enabled
[2025-10-13 00:13:59] 2025-10-12 22:13:14,905 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 00:13:59] 2025-10-12 22:13:33,173 | INFO     | [monitor] cgroup control has ended
[2025-10-13 00:13:59] 2025-10-12 22:13:33,346 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23170937169728)>', '<ExcThread(monitor, started 23170698409728)>']
[2025-10-13 00:13:59] 2025-10-12 22:13:34,257 | INFO     | PID=4106230 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 00:13:59] 2025-10-12 22:13:34,257 | INFO     | .. there are 5 such processes running
[2025-10-13 00:13:59] 2025-10-12 22:13:34,258 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 00:13:59] 2025-10-12 22:13:34,258 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 00:13:59] 2025-10-12 22:13:34,258 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 00:13:59] 2025-10-12 22:13:34,258 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 00:13:59] 2025-10-12 22:13:34,258 | INFO     | [monitor] control thread has ended
[2025-10-13 00:13:59] 2025-10-12 22:13:38,372 | INFO     | all workflow threads have been joined
[2025-10-13 00:13:59] 2025-10-12 22:13:38,372 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 00:13:59] 2025-10-12 22:13:38,372 | INFO     | traces error code: 0
[2025-10-13 00:13:59] 2025-10-12 22:13:38,373 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 00:13:59] 2025-10-12 22:13:38,564 [wrapper] ==== pilot stdout END ====
[2025-10-13 00:13:59] 2025-10-12 22:13:38,567 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 00:13:59] 2025-10-12 22:13:38,570 [wrapper] pilotpid: 4106230
[2025-10-13 00:13:59] 2025-10-12 22:13:38,573 [wrapper] Pilot exit status: 0
[2025-10-13 00:13:59] 2025-10-12 22:13:38,583 [wrapper] pandaids: 6838001277
[2025-10-13 00:13:59] 2025-10-12 22:13:38,661 [wrapper] cleanup supervisor_pilot  144886 4106231
[2025-10-13 00:13:59] 2025-10-12 22:13:38,665 [wrapper] Test setup, not cleaning
[2025-10-13 00:13:59] 2025-10-12 22:13:38,668 [wrapper] apfmon messages muted
[2025-10-13 00:13:59] 2025-10-12 22:13:38,671 [wrapper] ==== wrapper stdout END ====
[2025-10-13 00:13:59] 2025-10-12 22:13:38,673 [wrapper] ==== wrapper stderr END ====
[2025-10-13 00:13:59]  *** Error codes and diagnostics ***
[2025-10-13 00:13:59]     "exeErrorCode": 0,
[2025-10-13 00:13:59]     "exeErrorDiag": "",
[2025-10-13 00:13:59]     "pilotErrorCode": 0,
[2025-10-13 00:13:59]     "pilotErrorDiag": "",
[2025-10-13 00:13:59]  *** Listing of results directory ***
[2025-10-13 00:13:59] total 417260
[2025-10-13 00:13:59] -rw-r--r-- 1 boinc boinc    557409 Oct 11 05:26 pilot3.tar.gz
[2025-10-13 00:13:59] -rwx------ 1 boinc boinc     36292 Oct 11 05:39 runpilot2-wrapper.sh
[2025-10-13 00:13:59] -rw-r--r-- 1 boinc boinc      5112 Oct 11 05:39 queuedata.json
[2025-10-13 00:13:59] -rw-r--r-- 1 boinc boinc       100 Oct 12 21:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 00:13:59] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 21:13 run_atlas
[2025-10-13 00:13:59] -rw-r--r-- 1 boinc boinc       105 Oct 12 21:13 job.xml
[2025-10-13 00:13:59] -rw-r--r-- 1 boinc boinc      6635 Oct 12 21:14 init_data.xml
[2025-10-13 00:13:59] -rw-r--r-- 2 boinc boinc 220679016 Oct 12 21:14 EVNT.46676267._002028.pool.root.1
[2025-10-13 00:13:59] -rw-r--r-- 2 boinc boinc     15120 Oct 12 21:14 start_atlas.sh
[2025-10-13 00:13:59] drwxrwx--x 2 boinc boinc      4096 Oct 12 21:14 shared
[2025-10-13 00:13:59] -rw-r--r-- 2 boinc boinc    569677 Oct 12 21:14 input.tar.gz
[2025-10-13 00:13:59] -rw-r--r-- 1 boinc boinc         0 Oct 12 21:14 boinc_lockfile
[2025-10-13 00:13:59] -rw-r--r-- 1 boinc boinc      2549 Oct 12 21:14 pandaJob.out
[2025-10-13 00:13:59] -rw------- 1 boinc boinc    975528 Oct 12 21:14 agis_schedconf.cvmfs.json
[2025-10-13 00:13:59] -rw------- 1 boinc boinc   1560580 Oct 12 21:14 agis_ddmendpoints.agis.ALL.json
[2025-10-13 00:13:59] drwx------ 5 boinc boinc      4096 Oct 12 21:14 pilot3
[2025-10-13 00:13:59] -rw------- 1 boinc boinc 198893586 Oct 13 00:12 HITS.46676269._050389.pool.root.1
[2025-10-13 00:13:59] -rw-r--r-- 1 boinc boinc       528 Oct 13 00:12 boinc_task_state.xml
[2025-10-13 00:13:59] -rw------- 1 boinc boinc      1032 Oct 13 00:12 memory_monitor_summary.json
[2025-10-13 00:13:59] -rw------- 1 boinc boinc    367802 Oct 13 00:12 log.46676269._050389.job.log.tgz.1
[2025-10-13 00:13:59] -rw------- 1 boinc boinc      7828 Oct 13 00:13 heartbeat.json
[2025-10-13 00:13:59] -rw------- 1 boinc boinc        95 Oct 13 00:13 pilot_heartbeat.json
[2025-10-13 00:13:59] -rw-r--r-- 1 boinc boinc        27 Oct 13 00:13 wrapper_checkpoint.txt
[2025-10-13 00:13:59] -rw------- 1 boinc boinc      4905 Oct 13 00:13 pilotlog.txt
[2025-10-13 00:13:59] -rw------- 1 boinc boinc   1529377 Oct 13 00:13 log.46676269._050389.job.log.1
[2025-10-13 00:13:59] -rw------- 1 boinc boinc       357 Oct 13 00:13 output.list
[2025-10-13 00:13:59] -rw-r--r-- 1 boinc boinc       620 Oct 13 00:13 runtime_log
[2025-10-13 00:13:59] -rw------- 1 boinc boinc   1914880 Oct 13 00:13 result.tar.gz
[2025-10-13 00:13:59] -rw-r--r-- 1 boinc boinc      9070 Oct 13 00:13 runtime_log.err
[2025-10-13 00:13:59] -rw------- 1 boinc boinc       665 Oct 13 00:13 25SLDmycfR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNKfNDmH80XTn.diag
[2025-10-13 00:13:59] -rw-r--r-- 1 boinc boinc      8192 Oct 13 00:13 boinc_mmap_file
[2025-10-13 00:13:59] -rw-r--r-- 1 boinc boinc     20765 Oct 13 00:13 stderr.txt
[2025-10-13 00:13:59] HITS file was successfully produced:
[2025-10-13 00:13:59] -rw------- 1 boinc boinc 198893586 Oct 13 00:12 shared/HITS.pool.root.1
[2025-10-13 00:13:59]  *** Contents of shared directory: ***
[2025-10-13 00:13:59] total 412200
[2025-10-13 00:13:59] -rw-r--r-- 2 boinc boinc 220679016 Oct 12 21:14 ATLAS.root_0
[2025-10-13 00:13:59] -rw-r--r-- 2 boinc boinc     15120 Oct 12 21:14 start_atlas.sh
[2025-10-13 00:13:59] -rw-r--r-- 2 boinc boinc    569677 Oct 12 21:14 input.tar.gz
[2025-10-13 00:13:59] -rw------- 1 boinc boinc 198893586 Oct 13 00:12 HITS.pool.root.1
[2025-10-13 00:13:59] -rw------- 1 boinc boinc   1914880 Oct 13 00:13 result.tar.gz
00:14:01 (4102129): run_atlas exited; CPU time 41580.930990
00:14:01 (4102129): called boinc_finish(0)

</stderr_txt>
]]>

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