Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
22:16:35 (2521211): wrapper (7.7.26015): starting
22:16:35 (2521211): wrapper: running run_atlas (--nthreads 3)
[2025-10-11 22:16:35] Arguments: --nthreads 3
[2025-10-11 22:16:35] Threads: 3
[2025-10-11 22:16:35] Checking for CVMFS
[2025-10-11 22:16:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 22:16:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 22:16:35] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 22:16:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 22:16:36] 2.9.2.0 1545274 3350 82268 151595 1 56 31116430 36864000 0 130560 0 2562184 99.991 113398 996 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-11 22:16:36] CVMFS is ok
[2025-10-11 22:16:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 22:16:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 22:16:36] Further information can be found at the LHC@home message board.
[2025-10-11 22:16:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 22:16:36] Checking for apptainer binary...
[2025-10-11 22:16:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 22:16:36] Running /usr/bin/apptainer --version
[2025-10-11 22:16:36] apptainer version 1.4.1-1.1
[2025-10-11 22:16:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 22:16:36] atlasA223
[2025-10-11 22:16:36] apptainer works
[2025-10-11 22:16:36] Set ATHENA_PROC_NUMBER=3
[2025-10-11 22:16:36] Set ATHENA_CORE_NUMBER=3
[2025-10-11 22:16:36] Starting ATLAS job with PandaID=6837932699
[2025-10-11 22:16:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 23:42:54]  *** The last 200 lines of the pilot log: ***
[2025-10-11 23:42:54] 2025-10-11 21:42:12,231 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 23:42:54] 2025-10-11 21:42:12,701 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 23:42:54] 2025-10-11 21:42:12,842 | INFO     | [payload] failed_post thread has finished
[2025-10-11 23:42:54] 2025-10-11 21:42:13,065 | INFO     | [data] copytool_in thread has finished
[2025-10-11 23:42:54] 2025-10-11 21:42:13,153 | INFO     | [payload] control thread has finished
[2025-10-11 23:42:54] 2025-10-11 21:42:13,314 | INFO     | [job] validate thread has finished
[2025-10-11 23:42:54] 2025-10-11 21:42:13,388 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 23:42:54] 2025-10-11 21:42:13,430 | INFO     | [payload] validate_post thread has finished
[2025-10-11 23:42:54] 2025-10-11 21:42:14,237 | INFO     | [data] copytool_out thread has finished
[2025-10-11 23:42:54] 2025-10-11 21:42:14,928 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 23:42:54] 2025-10-11 21:42:21,835 | INFO     | job.realtimelogging is not enabled
[2025-10-11 23:42:54] 2025-10-11 21:42:22,841 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 23:42:54] 2025-10-11 21:42:41,587 | INFO     | PID=2524925 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 23:42:54] 2025-10-11 21:42:41,587 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 23:42:54] 2025-10-11 21:42:41,587 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 23:42:54] 2025-10-11 21:42:41,587 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 23:42:54] 2025-10-11 21:42:47,992 | INFO     | [monitor] cgroup control has ended
[2025-10-11 23:42:54] 2025-10-11 21:42:49,685 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139723897808704)>', '<ExcThread(monitor, started 139723272091392)>']
[2025-10-11 23:42:54] 2025-10-11 21:42:50,636 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 23:42:54] 2025-10-11 21:42:50,636 | INFO     | [monitor] control thread has ended
[2025-10-11 23:42:54] 2025-10-11 21:42:54,711 | INFO     | all workflow threads have been joined
[2025-10-11 23:42:54] 2025-10-11 21:42:54,711 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 23:42:54] 2025-10-11 21:42:54,712 | INFO     | traces error code: 0
[2025-10-11 23:42:54] 2025-10-11 21:42:54,712 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 23:42:54] 2025-10-11 21:42:54,763 [wrapper] ==== pilot stdout END ====
[2025-10-11 23:42:54] 2025-10-11 21:42:54,766 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 23:42:54] 2025-10-11 21:42:54,768 [wrapper] pilotpid: 2524925
[2025-10-11 23:42:54] 2025-10-11 21:42:54,771 [wrapper] Pilot exit status: 0
[2025-10-11 23:42:54] 2025-10-11 21:42:54,779 [wrapper] pandaids: 6837932699
[2025-10-11 23:42:54] 2025-10-11 21:42:54,797 [wrapper] cleanup supervisor_pilot 2543624 2524926
[2025-10-11 23:42:54] 2025-10-11 21:42:54,800 [wrapper] Test setup, not cleaning
[2025-10-11 23:42:54] 2025-10-11 21:42:54,802 [wrapper] apfmon messages muted
[2025-10-11 23:42:54] 2025-10-11 21:42:54,805 [wrapper] ==== wrapper stdout END ====
[2025-10-11 23:42:54] 2025-10-11 21:42:54,808 [wrapper] ==== wrapper stderr END ====
[2025-10-11 23:42:54]  *** Error codes and diagnostics ***
[2025-10-11 23:42:54]     "exeErrorCode": 0,
[2025-10-11 23:42:54]     "exeErrorDiag": "",
[2025-10-11 23:42:54]     "pilotErrorCode": 0,
[2025-10-11 23:42:54]     "pilotErrorDiag": "",
[2025-10-11 23:42:54]  *** Listing of results directory ***
[2025-10-11 23:42:54] total 410180
[2025-10-11 23:42:54] -rw-r--r-- 1 boinc boinc    557409 Oct 11 03:35 pilot3.tar.gz
[2025-10-11 23:42:54] -rw-r--r-- 1 boinc boinc      5112 Oct 11 04:02 queuedata.json
[2025-10-11 23:42:54] -rwx------ 1 boinc boinc     36292 Oct 11 04:02 runpilot2-wrapper.sh
[2025-10-11 23:42:54] -rw-r--r-- 1 boinc boinc       100 Oct 11 22:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 23:42:54] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 22:16 run_atlas
[2025-10-11 23:42:54] -rw-r--r-- 1 boinc boinc       105 Oct 11 22:16 job.xml
[2025-10-11 23:42:54] -rw-r--r-- 2 boinc boinc 218571295 Oct 11 22:16 EVNT.46676267._001978.pool.root.1
[2025-10-11 23:42:54] drwxrwx--x 2 boinc boinc      4096 Oct 11 22:16 shared
[2025-10-11 23:42:54] -rw-r--r-- 2 boinc boinc    569678 Oct 11 22:16 input.tar.gz
[2025-10-11 23:42:54] -rw-r--r-- 2 boinc boinc     15120 Oct 11 22:16 start_atlas.sh
[2025-10-11 23:42:54] -rw-r--r-- 1 boinc boinc         0 Oct 11 22:16 boinc_setup_complete
[2025-10-11 23:42:54] -rw-r--r-- 1 boinc boinc      6448 Oct 11 22:16 init_data.xml
[2025-10-11 23:42:54] -rw-r--r-- 1 boinc boinc         0 Oct 11 22:16 boinc_lockfile
[2025-10-11 23:42:54] -rw-r--r-- 1 boinc boinc      2549 Oct 11 22:16 pandaJob.out
[2025-10-11 23:42:54] -rw------- 1 boinc boinc    975528 Oct 11 22:16 agis_schedconf.cvmfs.json
[2025-10-11 23:42:54] -rw------- 1 boinc boinc   1560580 Oct 11 22:16 agis_ddmendpoints.agis.ALL.json
[2025-10-11 23:42:54] drwx------ 5 boinc boinc      4096 Oct 11 22:16 pilot3
[2025-10-11 23:42:54] -rw------- 1 boinc boinc 195565411 Oct 11 23:41 HITS.46676269._049045.pool.root.1
[2025-10-11 23:42:54] -rw-r--r-- 1 boinc boinc       529 Oct 11 23:41 boinc_task_state.xml
[2025-10-11 23:42:54] -rw------- 1 boinc boinc      1018 Oct 11 23:41 memory_monitor_summary.json
[2025-10-11 23:42:54] -rw------- 1 boinc boinc    247092 Oct 11 23:42 log.46676269._049045.job.log.tgz.1
[2025-10-11 23:42:54] -rw------- 1 boinc boinc        95 Oct 11 23:42 pilot_heartbeat.json
[2025-10-11 23:42:54] -rw------- 1 boinc boinc      7760 Oct 11 23:42 heartbeat.json
[2025-10-11 23:42:54] -rw-r--r-- 1 boinc boinc        27 Oct 11 23:42 wrapper_checkpoint.txt
[2025-10-11 23:42:54] -rw-r--r-- 1 boinc boinc      8192 Oct 11 23:42 boinc_mmap_file
[2025-10-11 23:42:54] -rw------- 1 boinc boinc      4824 Oct 11 23:42 pilotlog.txt
[2025-10-11 23:42:54] -rw------- 1 boinc boinc    750021 Oct 11 23:42 log.46676269._049045.job.log.1
[2025-10-11 23:42:54] -rw------- 1 boinc boinc       357 Oct 11 23:42 output.list
[2025-10-11 23:42:54] -rw-r--r-- 1 boinc boinc       620 Oct 11 23:42 runtime_log
[2025-10-11 23:42:54] -rw------- 1 boinc boinc   1013760 Oct 11 23:42 result.tar.gz
[2025-10-11 23:42:54] -rw------- 1 boinc boinc       661 Oct 11 23:42 xw4LDmT7dR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmwxQMDmsTuPTn.diag
[2025-10-11 23:42:54] -rw-r--r-- 1 boinc boinc      8792 Oct 11 23:42 runtime_log.err
[2025-10-11 23:42:54] -rw-r--r-- 1 boinc boinc      5945 Oct 11 23:42 stderr.txt
[2025-10-11 23:42:54] HITS file was successfully produced:
[2025-10-11 23:42:54] -rw------- 1 boinc boinc 195565411 Oct 11 23:41 shared/HITS.pool.root.1
[2025-10-11 23:42:54]  *** Contents of shared directory: ***
[2025-10-11 23:42:54] total 406012
[2025-10-11 23:42:54] -rw-r--r-- 2 boinc boinc 218571295 Oct 11 22:16 ATLAS.root_0
[2025-10-11 23:42:54] -rw-r--r-- 2 boinc boinc    569678 Oct 11 22:16 input.tar.gz
[2025-10-11 23:42:54] -rw-r--r-- 2 boinc boinc     15120 Oct 11 22:16 start_atlas.sh
[2025-10-11 23:42:54] -rw------- 1 boinc boinc 195565411 Oct 11 23:41 HITS.pool.root.1
[2025-10-11 23:42:54] -rw------- 1 boinc boinc   1013760 Oct 11 23:42 result.tar.gz
23:42:56 (2521211): run_atlas exited; CPU time 14728.486199
23:42:56 (2521211): called boinc_finish(0)

</stderr_txt>
]]>

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