Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:38:19 (3818445): wrapper (7.7.26015): starting
16:38:19 (3818445): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 16:38:19] Arguments: --nthreads 4
[2025-10-12 16:38:19] Threads: 4
[2025-10-12 16:38:19] Checking for CVMFS
[2025-10-12 16:38:19] No cvmfs_config command found, will try listing directly
[2025-10-12 16:38:19] CVMFS is ok
[2025-10-12 16:38:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 16:38:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 16:38:19] Further information can be found at the LHC@home message board.
[2025-10-12 16:38:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:38:19] Checking for apptainer binary...
[2025-10-12 16:38:19] which: no apptainer in ((null))
[2025-10-12 16:38:19] apptainer is not installed, using version from CVMFS
[2025-10-12 16:38:19] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:38:19] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot104/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2025-10-12 16:38:19] apptainer works
[2025-10-12 16:38:19] Set ATHENA_PROC_NUMBER=4
[2025-10-12 16:38:19] Set ATHENA_CORE_NUMBER=4
[2025-10-12 16:38:19] Starting ATLAS job with PandaID=6838000549
[2025-10-12 16:38:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot104/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 20:07:58]  *** The last 200 lines of the pilot log: ***
[2025-10-12 20:07:58] 2025-10-12 17:13:17,493 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 20:07:58] 2025-10-12 17:13:17,512 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2694.5495703125016
[2025-10-12 20:07:58] 2025-10-12 17:13:17,534 | INFO     | using path: /scratch/boinc/var/slot104/slots/0/PanDA_Pilot-6838000549/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 20:07:58] 2025-10-12 17:13:17,535 | INFO     | extracted standard info from prmon json
[2025-10-12 20:07:58] 2025-10-12 17:13:17,535 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 20:07:58] 2025-10-12 17:13:17,535 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 20:07:58] 2025-10-12 17:13:17,536 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 20:07:58] 2025-10-12 17:13:17,536 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 20:07:58] 2025-10-12 17:13:17,539 | INFO     | fitting pss+swap vs Time
[2025-10-12 20:07:58] 2025-10-12 17:13:17,539 | INFO     | sum of square deviations: 1088905998.0
[2025-10-12 20:07:58] 2025-10-12 17:13:17,540 | INFO     | sum of deviations: 17693048475.000008
[2025-10-12 20:07:58] 2025-10-12 17:13:17,540 | INFO     | mean x: 1760284552.5
[2025-10-12 20:07:58] 2025-10-12 17:13:17,540 | INFO     | mean y: 2304804.1315789474
[2025-10-12 20:07:58] 2025-10-12 17:13:17,540 | INFO     | -- intersect: -28599613060.56935
[2025-10-12 20:07:58] 2025-10-12 17:13:17,540 | INFO     | intersect: -28599613060.56935
[2025-10-12 20:07:58] 2025-10-12 17:13:17,540 | INFO     | chi2: 1.2392956889848403
[2025-10-12 20:07:58] 2025-10-12 17:13:17,541 | INFO     | sum of square deviations: 984941258.0
[2025-10-12 20:07:58] 2025-10-12 17:13:17,541 | INFO     | sum of deviations: 16557069509.0
[2025-10-12 20:07:58] 2025-10-12 17:13:17,542 | INFO     | mean x: 1760284400.0
[2025-10-12 20:07:58] 2025-10-12 17:13:17,542 | INFO     | mean y: 2303155.768707483
[2025-10-12 20:07:58] 2025-10-12 17:13:17,542 | INFO     | -- intersect: -29588447490.203686
[2025-10-12 20:07:58] 2025-10-12 17:13:17,542 | INFO     | intersect: -29588447490.203686
[2025-10-12 20:07:58] 2025-10-12 17:13:17,542 | INFO     | chi2: 1.2388911906260605
[2025-10-12 20:07:58] 2025-10-12 17:13:17,542 | INFO     | current chi2=1.2388911906260605 (change=0.03263937431358386 %)
[2025-10-12 20:07:58] 2025-10-12 17:13:17,542 | INFO     | right removable region: 146
[2025-10-12 20:07:58] 2025-10-12 17:13:17,543 | INFO     | sum of square deviations: 984941258.0
[2025-10-12 20:07:58] 2025-10-12 17:13:17,543 | INFO     | sum of deviations: -563934325.0
[2025-10-12 20:07:58] 2025-10-12 17:13:17,544 | INFO     | mean x: 1760284705.0
[2025-10-12 20:07:58] 2025-10-12 17:13:17,544 | INFO     | mean y: 2331133.129251701
[2025-10-12 20:07:58] 2025-10-12 17:13:17,544 | INFO     | -- intersect: 1010193235.4212437
[2025-10-12 20:07:58] 2025-10-12 17:13:17,544 | INFO     | intersect: 1010193235.4212437
[2025-10-12 20:07:58] 2025-10-12 17:13:17,544 | INFO     | chi2: 0.004007669155017208
[2025-10-12 20:07:58] 2025-10-12 17:13:17,544 | INFO     | current chi2=0.004007669155017208 (change=99.67661719550561 %)
[2025-10-12 20:07:58] 2025-10-12 17:13:17,544 | INFO     | sum of square deviations: 887813855.5
[2025-10-12 20:07:58] 2025-10-12 17:13:17,545 | INFO     | sum of deviations: -785521308.5000002
[2025-10-12 20:07:58] 2025-10-12 17:13:17,545 | INFO     | mean x: 1760284857.5
[2025-10-12 20:07:58] 2025-10-12 17:13:17,545 | INFO     | mean y: 2331475.4577464787
[2025-10-12 20:07:58] 2025-10-12 17:13:17,545 | INFO     | -- intersect: 1559799018.941175
[2025-10-12 20:07:58] 2025-10-12 17:13:17,546 | INFO     | intersect: 1559799018.941175
[2025-10-12 20:07:58] 2025-10-12 17:13:17,546 | INFO     | chi2: 0.00377786096716964
[2025-10-12 20:07:58] 2025-10-12 17:13:17,546 | INFO     | current chi2=0.00377786096716964 (change=5.73421055877008 %)
[2025-10-12 20:07:58] 2025-10-12 17:13:17,546 | INFO     | left removable region: 20
[2025-10-12 20:07:58] 2025-10-12 17:13:17,546 | INFO     | sum of square deviations: 620244187.5
[2025-10-12 20:07:58] 2025-10-12 17:13:17,547 | INFO     | sum of deviations: -835743706.5
[2025-10-12 20:07:58] 2025-10-12 17:13:17,547 | INFO     | mean x: 1760284979.5
[2025-10-12 20:07:58] 2025-10-12 17:13:17,547 | INFO     | mean y: 2329809.753968254
[2025-10-12 20:07:58] 2025-10-12 17:13:17,547 | INFO     | -- intersect: 2374213533.7971
[2025-10-12 20:07:58] 2025-10-12 17:13:17,547 | INFO     | intersect: 2374213533.7971
[2025-10-12 20:07:58] 2025-10-12 17:13:17,547 | INFO     | chi2: 0.0014397706607814757
[2025-10-12 20:07:58] 2025-10-12 17:13:17,547 | INFO     | -- intersect: 2374213533.7971
[2025-10-12 20:07:58] 2025-10-12 17:13:17,548 | INFO     | current memory leak: -1.35 B/s (using 126 data points, chi2=0.00)
[2025-10-12 20:07:58] 2025-10-12 17:13:17,548 | INFO     | could have reported an average CPU frequency of 2708 MHz (9 samples)
[2025-10-12 20:07:58] 2025-10-12 17:13:17,548 | INFO     | ..............................
[2025-10-12 20:07:58] 2025-10-12 17:13:17,548 | INFO     | . Timing measurements:
[2025-10-12 20:07:58] 2025-10-12 17:13:17,548 | INFO     | . get job = 0 s
[2025-10-12 20:07:58] 2025-10-12 17:13:17,548 | INFO     | . initial setup = 1 s
[2025-10-12 20:07:58] 2025-10-12 17:13:17,548 | INFO     | . payload setup = 8 s
[2025-10-12 20:07:58] 2025-10-12 17:13:17,549 | INFO     | . stage-in = 0 s
[2025-10-12 20:07:58] 2025-10-12 17:13:17,549 | INFO     | . payload execution = 9247 s
[2025-10-12 20:07:58] 2025-10-12 17:13:17,549 | INFO     | . stage-out = 0 s
[2025-10-12 20:07:58] 2025-10-12 17:13:17,549 | INFO     | . log creation = 0 s
[2025-10-12 20:07:58] 2025-10-12 17:13:17,549 | INFO     | ..............................
[2025-10-12 20:07:58] 2025-10-12 17:13:17,677 | INFO     | 
[2025-10-12 20:07:58] 2025-10-12 17:13:17,677 | INFO     | job summary report
[2025-10-12 20:07:58] 2025-10-12 17:13:17,677 | INFO     | --------------------------------------------------
[2025-10-12 20:07:58] 2025-10-12 17:13:17,678 | INFO     | PanDA job id: 6838000549
[2025-10-12 20:07:58] 2025-10-12 17:13:17,678 | INFO     | task id: 46676269
[2025-10-12 20:07:58] 2025-10-12 17:13:17,678 | INFO     | errors: (none)
[2025-10-12 20:07:58] 2025-10-12 17:13:17,678 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 20:07:58] 2025-10-12 17:13:17,678 | INFO     | pilot state: finished 
[2025-10-12 20:07:58] 2025-10-12 17:13:17,678 | INFO     | transexitcode: 0
[2025-10-12 20:07:58] 2025-10-12 17:13:17,678 | INFO     | exeerrorcode: 0
[2025-10-12 20:07:58] 2025-10-12 17:13:17,678 | INFO     | exeerrordiag: 
[2025-10-12 20:07:58] 2025-10-12 17:13:17,678 | INFO     | exitcode: 0
[2025-10-12 20:07:58] 2025-10-12 17:13:17,678 | INFO     | exitmsg: OK
[2025-10-12 20:07:58] 2025-10-12 17:13:17,678 | INFO     | cpuconsumptiontime: 35328 s
[2025-10-12 20:07:58] 2025-10-12 17:13:17,678 | INFO     | nevents: 400
[2025-10-12 20:07:58] 2025-10-12 17:13:17,678 | INFO     | neventsw: 0
[2025-10-12 20:07:58] 2025-10-12 17:13:17,679 | INFO     | pid: 3854435
[2025-10-12 20:07:58] 2025-10-12 17:13:17,679 | INFO     | pgrp: 3854435
[2025-10-12 20:07:58] 2025-10-12 17:13:17,679 | INFO     | corecount: 4
[2025-10-12 20:07:58] 2025-10-12 17:13:17,679 | INFO     | event service: False
[2025-10-12 20:07:58] 2025-10-12 17:13:17,679 | INFO     | sizes: {0: 2348590, 1: 2348845, 7: 2349107, 12: 2349135, 9259: 2377830, 9260: 2387036, 9267: 2387238}
[2025-10-12 20:07:58] 2025-10-12 17:13:17,679 | INFO     | --------------------------------------------------
[2025-10-12 20:07:58] 2025-10-12 17:13:17,679 | INFO     | 
[2025-10-12 20:07:58] 2025-10-12 17:13:17,679 | INFO     | executing command: ls -lF /scratch/boinc/var/slot104/slots/0
[2025-10-12 20:07:58] 2025-10-12 17:13:17,707 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 20:07:58] 2025-10-12 17:13:17,707 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 20:07:58] 2025-10-12 17:13:17,707 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 20:07:58] 2025-10-12 17:13:17,707 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 20:07:58] 2025-10-12 17:13:17,707 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 20:07:58] 2025-10-12 17:13:17,707 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 20:07:58] 2025-10-12 17:13:17,707 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 20:07:58] 2025-10-12 17:13:17,708 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 20:07:58] 2025-10-12 17:13:17,708 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 20:07:58] 2025-10-12 17:13:17,708 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 20:07:58] 2025-10-12 17:13:17,708 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 20:07:58] 2025-10-12 17:13:17,708 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 20:07:58] 2025-10-12 17:13:17,708 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 20:07:58] 2025-10-12 17:13:17,708 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 20:07:58] 2025-10-12 17:13:17,708 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 20:07:58] 2025-10-12 17:13:17,708 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 20:07:58] 2025-10-12 17:13:17,708 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 20:07:58] 2025-10-12 17:13:17,708 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 20:07:58] 2025-10-12 17:13:17,708 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 20:07:58] 2025-10-12 17:13:17,709 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 20:07:58] 2025-10-12 17:13:17,709 | INFO     | job 6838000549 has completed (purged errors)
[2025-10-12 20:07:58] 2025-10-12 17:13:17,709 | INFO     | overall cleanup function is called
[2025-10-12 20:07:58] 2025-10-12 17:13:18,715 | INFO     | --- collectZombieJob: --- 10, [3854435]
[2025-10-12 20:07:58] 2025-10-12 17:13:18,715 | INFO     | zombie collector waiting for pid 3854435
[2025-10-12 20:07:58] 2025-10-12 17:13:18,715 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 20:07:58] 2025-10-12 17:13:18,715 | INFO     | collected zombie processes
[2025-10-12 20:07:58] 2025-10-12 17:13:18,715 | INFO     | will attempt to kill all subprocesses of pid=3854435
[2025-10-12 20:07:58] 2025-10-12 17:13:19,481 | INFO     | process IDs to be killed: [3854435] (in reverse order)
[2025-10-12 20:07:58] 2025-10-12 17:13:19,743 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 20:07:58] 2025-10-12 17:13:19,744 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 20:07:58] 2025-10-12 17:13:19,775 | INFO     | did not find any defunct processes belonging to 3854435
[2025-10-12 20:07:58] 2025-10-12 17:13:19,807 | INFO     | did not find any defunct processes belonging to 3854435
[2025-10-12 20:07:58] 2025-10-12 17:13:19,807 | INFO     | ready for new job
[2025-10-12 20:07:58] 2025-10-12 17:13:19,808 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 20:07:58] 2025-10-12 17:13:19,810 | INFO     | ***************************************
[2025-10-12 20:07:58] 2025-10-12 17:13:19,810 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 20:07:58] 2025-10-12 17:13:19,810 | INFO     | ***************************************
[2025-10-12 20:07:58] 2025-10-12 17:13:19,810 | INFO     | 
[2025-10-12 20:07:58] 2025-10-12 17:13:19,818 | INFO     | architecture information:
[2025-10-12 20:07:58] 2025-10-12 17:13:19,819 | INFO     | executing command: cat /etc/os-release
[2025-10-12 20:07:58] 2025-10-12 17:13:19,840 | INFO     | cat /etc/os-release:
[2025-10-12 20:07:58] NAME="CentOS Linux"
[2025-10-12 20:07:58] VERSION="7 (Core)"
[2025-10-12 20:07:58] ID="centos"
[2025-10-12 20:07:58] ID_LIKE="rhel fedora"
[2025-10-12 20:07:58] VERSION_ID="7"
[2025-10-12 20:07:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 20:07:58] ANSI_COLOR="0;31"
[2025-10-12 20:07:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 20:07:58] HOME_URL="https://www.centos.org/"
[2025-10-12 20:07:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 20:07:58] 
[2025-10-12 20:07:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 20:07:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 20:07:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 20:07:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 20:07:58] 
[2025-10-12 20:07:58] 2025-10-12 17:13:19,840 | INFO     | ***************************************
[2025-10-12 20:07:58] 2025-10-12 17:13:20,343 | INFO     | executing command: df -mP /scratch/boinc/var/slot104/slots/0
[2025-10-12 20:07:58] 2025-10-12 17:13:20,366 | INFO     | sufficient remaining disk space (3341178372096 B)
[2025-10-12 20:07:58] 2025-10-12 17:13:20,366 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 20:07:58] 2025-10-12 17:13:20,366 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 20:07:58] 2025-10-12 17:13:20,366 | INFO     | update_server=False
[2025-10-12 20:07:58] 2025-10-12 17:13:20,366 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 20:07:58] 2025-10-12 17:13:20,453 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 20:07:58] 2025-10-12 17:13:20,454 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 20:07:58] 2025-10-12 17:13:20,454 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:07:58] 2025-10-12 17:13:20,454 | INFO     | will abort loop
[2025-10-12 20:07:58] 2025-10-12 17:13:20,500 | INFO     | all job control threads have been joined
[2025-10-12 20:07:58] 2025-10-12 17:13:20,853 | INFO     | all data control threads have been joined
[2025-10-12 20:07:58] 2025-10-12 17:13:21,365 | INFO     | all payload control threads have been joined
[2025-10-12 20:07:58] 2025-10-12 17:13:21,372 | INFO     | [job] retrieve thread has finished
[2025-10-12 20:07:58] 2025-10-12 17:13:21,458 | INFO     | [job] job monitor thread has finished
[2025-10-12 20:07:58] 2025-10-12 17:13:21,505 | INFO     | [job] control thread has finished
[2025-10-12 20:07:58] 2025-10-12 17:13:21,557 | INFO     | [data] copytool_in thread has finished
[2025-10-12 20:07:58] 2025-10-12 17:13:21,568 | INFO     | [job] validate thread has finished
[2025-10-12 20:07:58] 2025-10-12 17:13:21,613 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 20:07:58] 2025-10-12 17:13:21,640 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 20:07:58] 2025-10-12 17:13:21,692 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 20:07:58] 2025-10-12 17:13:21,858 | INFO     | [data] control thread has finished
[2025-10-12 20:07:58] 2025-10-12 17:13:22,101 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 20:07:58] 2025-10-12 17:13:22,370 | INFO     | [payload] control thread has finished
[2025-10-12 20:07:58] 2025-10-12 17:13:22,434 | INFO     | [payload] validate_post thread has finished
[2025-10-12 20:07:58] 2025-10-12 17:13:22,591 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 20:07:58] 2025-10-12 17:13:22,656 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:07:58] 2025-10-12 17:13:22,909 | INFO     | [payload] failed_post thread has finished
[2025-10-12 20:07:58] 2025-10-12 17:13:23,626 | INFO     | [data] copytool_out thread has finished
[2025-10-12 20:07:58] 2025-10-12 17:13:23,661 | INFO     | [job] queue monitor thread has finished
[2025-10-12 20:07:58] 2025-10-12 17:13:25,699 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 20:07:58] 2025-10-12 17:13:31,156 | INFO     | job.realtimelogging is not enabled
[2025-10-12 20:07:58] 2025-10-12 17:13:32,162 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 20:07:58] 2025-10-12 17:13:47,329 | INFO     | [monitor] cgroup control has ended
[2025-10-12 20:07:58] 2025-10-12 17:13:49,068 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22895895615296)>', '<ExcThread(monitor, started 22895455614720)>']
[2025-10-12 20:07:58] 2025-10-12 17:13:50,870 | INFO     | PID=3828958 has CPU usage=9.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 20:07:58] 2025-10-12 17:13:50,873 | INFO     | .. there are 10 such processes running
[2025-10-12 20:07:58] 2025-10-12 17:13:50,874 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 20:07:58] 2025-10-12 17:13:50,874 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 20:07:58] 2025-10-12 17:13:50,874 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 20:07:58] 2025-10-12 17:13:50,874 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 20:07:58] 2025-10-12 17:13:50,874 | INFO     | [monitor] control thread has ended
[2025-10-12 20:07:58] 2025-10-12 17:13:54,072 | INFO     | all workflow threads have been joined
[2025-10-12 20:07:58] 2025-10-12 17:13:54,073 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 20:07:58] 2025-10-12 17:13:54,073 | INFO     | traces error code: 0
[2025-10-12 20:07:58] 2025-10-12 17:13:54,073 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 20:07:58] 2025-10-12 17:13:54,219 [wrapper] ==== pilot stdout END ====
[2025-10-12 20:07:58] 2025-10-12 17:13:54,223 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 20:07:58] 2025-10-12 17:13:54,227 [wrapper] pilotpid: 3828958
[2025-10-12 20:07:58] 2025-10-12 17:13:54,230 [wrapper] Pilot exit status: 0
[2025-10-12 20:07:58] 2025-10-12 17:13:54,246 [wrapper] pandaids: 6838000549
[2025-10-12 20:07:58] 2025-10-12 17:13:54,423 [wrapper] cleanup supervisor_pilot 4145455 3828959
[2025-10-12 20:07:58] 2025-10-12 17:13:54,431 [wrapper] Test setup, not cleaning
[2025-10-12 20:07:58] 2025-10-12 17:13:54,434 [wrapper] apfmon messages muted
[2025-10-12 20:07:58] 2025-10-12 17:13:54,438 [wrapper] ==== wrapper stdout END ====
[2025-10-12 20:07:58] 2025-10-12 17:13:54,443 [wrapper] ==== wrapper stderr END ====
[2025-10-12 20:07:58]  *** Error codes and diagnostics ***
[2025-10-12 20:07:58]     "exeErrorCode": 0,
[2025-10-12 20:07:58]     "exeErrorDiag": "",
[2025-10-12 20:07:58]     "pilotErrorCode": 0,
[2025-10-12 20:07:58]     "pilotErrorDiag": "",
[2025-10-12 20:07:58]  *** Listing of results directory ***
[2025-10-12 20:07:58] total 404804
[2025-10-12 20:07:58] -rw-r--r-- 1 boinc boinc    557409 Oct 11 04:50 pilot3.tar.gz
[2025-10-12 20:07:58] -rw-r--r-- 1 boinc boinc      5112 Oct 11 05:00 queuedata.json
[2025-10-12 20:07:58] -rwx------ 1 boinc boinc     36292 Oct 11 05:01 runpilot2-wrapper.sh
[2025-10-12 20:07:58] -rw-r--r-- 1 boinc boinc       100 Oct 12 16:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 20:07:58] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 16:38 run_atlas
[2025-10-12 20:07:58] -rw-r--r-- 1 boinc boinc       105 Oct 12 16:38 job.xml
[2025-10-12 20:07:58] -rw-r--r-- 2 boinc boinc 222394011 Oct 12 16:38 EVNT.46676267._000620.pool.root.1
[2025-10-12 20:07:58] -rw-r--r-- 1 boinc boinc      6688 Oct 12 16:38 init_data.xml
[2025-10-12 20:07:58] -rw-r--r-- 2 boinc boinc     15120 Oct 12 16:38 start_atlas.sh
[2025-10-12 20:07:58] drwxrwx--x 2 boinc boinc      4096 Oct 12 16:38 shared
[2025-10-12 20:07:58] -rw-r--r-- 2 boinc boinc    569683 Oct 12 16:38 input.tar.gz
[2025-10-12 20:07:58] -rw-r--r-- 1 boinc boinc         0 Oct 12 16:38 boinc_lockfile
[2025-10-12 20:07:58] -rw-r--r-- 1 boinc boinc      2549 Oct 12 16:38 pandaJob.out
[2025-10-12 20:07:58] -rw------- 1 boinc boinc    975528 Oct 12 16:38 agis_schedconf.cvmfs.json
[2025-10-12 20:07:58] -rw------- 1 boinc boinc   1560580 Oct 12 16:38 agis_ddmendpoints.agis.ALL.json
[2025-10-12 20:07:58] drwx------ 5 boinc boinc      4096 Oct 12 16:38 pilot3
[2025-10-12 20:07:58] -rw-r--r-- 1 boinc boinc       528 Oct 12 19:12 boinc_task_state.xml
[2025-10-12 20:07:58] -rw------- 1 boinc boinc 184936828 Oct 12 19:12 HITS.46676269._049921.pool.root.1
[2025-10-12 20:07:58] -rw------- 1 boinc boinc      1024 Oct 12 19:13 memory_monitor_summary.json
[2025-10-12 20:07:58] -rw------- 1 boinc boinc    332443 Oct 12 19:13 log.46676269._049921.job.log.tgz.1
[2025-10-12 20:07:58] -rw------- 1 boinc boinc      7774 Oct 12 19:13 heartbeat.json
[2025-10-12 20:07:58] -rw------- 1 boinc boinc        95 Oct 12 19:13 pilot_heartbeat.json
[2025-10-12 20:07:58] -rw------- 1 boinc boinc      5094 Oct 12 19:13 pilotlog.txt
[2025-10-12 20:07:58] -rw------- 1 boinc boinc   1308205 Oct 12 19:13 log.46676269._049921.job.log.1
[2025-10-12 20:07:58] -rw------- 1 boinc boinc       357 Oct 12 19:13 output.list
[2025-10-12 20:07:58] -rw-r--r-- 1 boinc boinc       620 Oct 12 19:13 runtime_log
[2025-10-12 20:07:58] -rw------- 1 boinc boinc   1658880 Oct 12 19:13 result.tar.gz
[2025-10-12 20:07:58] -rw-r--r-- 1 boinc boinc      9084 Oct 12 19:13 runtime_log.err
[2025-10-12 20:07:58] -rw------- 1 boinc boinc       663 Oct 12 19:13 KDrMDmz2eR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmoFfNDm1MQOym.diag
[2025-10-12 20:07:58] -rw-r--r-- 1 boinc boinc        26 Oct 12 20:07 wrapper_checkpoint.txt
[2025-10-12 20:07:58] -rw-r--r-- 1 boinc boinc      8192 Oct 12 20:07 boinc_mmap_file
[2025-10-12 20:07:58] -rw-r--r-- 1 boinc boinc     20847 Oct 12 20:07 stderr.txt
[2025-10-12 20:07:58] HITS file was successfully produced:
[2025-10-12 20:07:58] -rw------- 1 boinc boinc 184936828 Oct 12 19:12 shared/HITS.pool.root.1
[2025-10-12 20:07:58]  *** Contents of shared directory: ***
[2025-10-12 20:07:58] total 399992
[2025-10-12 20:07:58] -rw-r--r-- 2 boinc boinc 222394011 Oct 12 16:38 ATLAS.root_0
[2025-10-12 20:07:58] -rw-r--r-- 2 boinc boinc     15120 Oct 12 16:38 start_atlas.sh
[2025-10-12 20:07:58] -rw-r--r-- 2 boinc boinc    569683 Oct 12 16:38 input.tar.gz
[2025-10-12 20:07:58] -rw------- 1 boinc boinc 184936828 Oct 12 19:12 HITS.pool.root.1
[2025-10-12 20:07:58] -rw------- 1 boinc boinc   1658880 Oct 12 19:13 result.tar.gz
20:07:59 (3818445): run_atlas exited; CPU time 35920.125439
20:07:59 (3818445): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN