Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-11 13:52:06 (30392): vboxwrapper version 26210
2025-10-11 13:52:06 (30392): BOINC client version: 8.2.4
2025-10-11 13:52:07 (30392): Detected: VirtualBox VboxManage Interface (Version: 7.1.10)
2025-10-11 13:52:07 (30392): Successfully copied 'init_data.xml' to the shared directory.
2025-10-11 13:52:07 (30392): Create VM. (boinc_52327f44ce02d2dd, slot#0)
2025-10-11 13:52:08 (30392): Setting Memory Size for VM. (4000MB)
2025-10-11 13:52:08 (30392): Setting CPU Count for VM. (4)
2025-10-11 13:52:08 (30392): Setting Chipset Options for VM.
2025-10-11 13:52:09 (30392): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-11 13:52:09 (30392): Setting Boot Options for VM.
2025-10-11 13:52:09 (30392): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-11 13:52:10 (30392): Enabling VM Network Access.
2025-10-11 13:52:10 (30392): Disabling USB Support for VM.
2025-10-11 13:52:10 (30392): Disabling COM Port Support for VM.
2025-10-11 13:52:10 (30392): Disabling LPT Port Support for VM.
2025-10-11 13:52:11 (30392): Disabling Audio Support for VM.
2025-10-11 13:52:11 (30392): Disabling Clipboard Support for VM.
2025-10-11 13:52:11 (30392): Disabling Drag and Drop Support for VM.
2025-10-11 13:52:11 (30392): Adding storage controller(s) to VM.
2025-10-11 13:52:12 (30392): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-11 13:52:12 (30392): Adding VirtualBox Guest Additions to VM.
2025-10-11 13:52:12 (30392): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-11 13:52:13 (30392): forwarding host port 52899 to guest port 80
2025-10-11 13:52:13 (30392): Enabling remote desktop for VM.
2025-10-11 13:52:13 (30392): Enabling shared directory for VM.
2025-10-11 13:52:14 (30392): Starting VM using VBoxManage interface. (boinc_52327f44ce02d2dd, slot#0)
2025-10-11 13:52:18 (30392): Successfully started VM. (PID = '26468')
2025-10-11 13:52:18 (30392): Reporting VM Process ID to BOINC.
2025-10-11 13:52:18 (30392): Guest Log: BIOS: VirtualBox 7.1.10
2025-10-11 13:52:18 (30392): Guest Log: CPUID EDX: 0x178bfbff
2025-10-11 13:52:18 (30392): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-11 13:52:18 (30392): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-11 13:52:18 (30392): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-11 13:52:18 (30392): Detected: Web Application Enabled (http://localhost:52899)
2025-10-11 13:52:18 (30392): Detected: Remote Desktop Enabled (localhost:52900)
2025-10-11 13:52:18 (30392): Preference change detected
2025-10-11 13:52:18 (30392): Setting CPU throttle for VM. (100%)
2025-10-11 13:52:18 (30392): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 480 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-11 13:52:20 (30392): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-11 13:52:20 (30392): Guest Log: BIOS: Booting from Hard Disk...
2025-10-11 13:52:23 (30392): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-11 13:52:23 (30392): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-11 13:52:23 (30392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-11 13:52:23 (30392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-11 13:52:23 (30392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-11 13:52:23 (30392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-11 13:52:23 (30392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-11 13:52:23 (30392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-11 13:52:23 (30392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-11 13:52:23 (30392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-11 13:52:23 (30392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-11 13:52:23 (30392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-11 13:52:23 (30392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-11 13:52:23 (30392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-11 13:52:23 (30392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-11 13:52:23 (30392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-11 13:52:23 (30392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-11 13:52:23 (30392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-11 13:52:23 (30392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-11 13:52:23 (30392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-11 13:52:23 (30392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-11 13:52:23 (30392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-11 13:52:23 (30392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-11 13:52:23 (30392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-11 13:52:23 (30392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-11 13:52:23 (30392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-11 13:52:23 (30392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-11 13:52:23 (30392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-11 13:52:23 (30392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-11 13:52:23 (30392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-11 13:52:23 (30392): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-11 13:52:23 (30392): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-11 13:52:28 (30392): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-11 13:52:28 (30392): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-11 13:52:32 (30392): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-11 13:52:32 (30392): Guest Log: 00:00:00.000106 main     Log opened 2025-10-11T13:52:29.891431000Z
2025-10-11 13:52:32 (30392): Guest Log: 00:00:00.000172 main     OS Product: Linux
2025-10-11 13:52:32 (30392): Guest Log: 00:00:00.000188 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-11 13:52:32 (30392): Guest Log: 00:00:00.000202 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-11 13:52:32 (30392): Guest Log: 00:00:00.000217 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-11 13:52:32 (30392): Guest Log: 00:00:00.000217 main     Process ID: 1300
2025-10-11 13:52:32 (30392): Guest Log: 00:00:00.000217 main     Package type: LINUX_64BITS_GENERIC
2025-10-11 13:52:32 (30392): Guest Log: 00:00:00.000620 main     5.2.32 r132073 started. Verbose level = 0
2025-10-11 13:52:32 (30392): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-11 13:52:32 (30392): Guest Log: [INFO] Mounting shared directory
2025-10-11 13:52:32 (30392): Guest Log: [INFO] Checking for init_data.xml
2025-10-11 13:52:42 (30392): Guest Log: 00:00:10.001588 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 587 913 640 000ns (GuestNow=1 760 187 161 979 117 000 ns GuestLast=1 760 190 749 892 757 000 ns fSetTimeLastLoop=true )
2025-10-11 13:52:54 (30392): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-11 13:52:54 (30392): Guest Log: [INFO] Detected branch: prod
2025-10-11 13:52:54 (30392): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-11 13:52:54 (30392): Guest Log: Copying input files
2025-10-11 13:52:55 (30392): Guest Log: Copied input files into RunAtlas.
2025-10-11 13:52:55 (30392): Guest Log: Detected user-configured HTTP proxy at http://treacle:3128 - will set in /etc/cvmfs/default.local
2025-10-11 13:54:08 (30392): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-11 13:54:09 (30392): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-11 13:54:09 (30392): Guest Log: 2.6.3.0 1578 1 31656 151584 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.15:3128 1
2025-10-11 13:54:09 (30392): Guest Log: copied the webapp to /var/www
2025-10-11 13:54:09 (30392): Guest Log: ATHENA_PROC_NUMBER=4
2025-10-11 13:54:09 (30392): Guest Log: ATHENA_CORE_NUMBER=4
2025-10-11 13:54:09 (30392): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-11 13:54:09 (30392): Guest Log:  *** Starting ATLAS job. (PandaID=6838001094 taskID=46676269) ***
2025-10-11 15:03:26 (30392): Guest Log:  *** Job finished ***
2025-10-11 15:03:26 (30392): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-11 15:03:26 (30392): Guest Log: 2025-10-11 14:03:10,645 | INFO     | all workflow threads have been joined
2025-10-11 15:03:26 (30392): Guest Log: 2025-10-11 14:03:10,645 | INFO     | end of generic workflow (traces error code: 0)
2025-10-11 15:03:26 (30392): Guest Log: 2025-10-11 14:03:10,645 | INFO     | traces error code: 0
2025-10-11 15:03:26 (30392): Guest Log: 2025-10-11 14:03:10,645 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-11 15:03:26 (30392): Guest Log: 2025-10-11 14:03:24,083 | INFO     | PID=6044 has CPU usage=0.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-10-11 15:03:26 (30392): Guest Log: 2025-10-11 14:03:24,083 | INFO     | found 0 job(s) in 20 queues
2025-10-11 15:03:26 (30392): Guest Log: 2025-10-11 14:03:24,083 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-11 15:03:26 (30392): Guest Log: 2025-10-11 14:03:24,083 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-11 15:03:26 (30392): Guest Log: 2025-10-11 14:03:24,084 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-11 15:03:26 (30392): Guest Log: 2025-10-11 14:03:24,084 | INFO     | [monitor] control thread has ended
2025-10-11 15:03:26 (30392): Guest Log: 2025-10-11 14:03:24,125 [wrapper] ==== pilot stdout END ====
2025-10-11 15:03:26 (30392): Guest Log: 2025-10-11 14:03:24,128 [wrapper] ==== wrapper stdout RESUME ====
2025-10-11 15:03:26 (30392): Guest Log: 2025-10-11 14:03:24,130 [wrapper] pilotpid: 6044
2025-10-11 15:03:26 (30392): Guest Log: 2025-10-11 14:03:24,133 [wrapper] Pilot exit status: 0
2025-10-11 15:03:26 (30392): Guest Log: 2025-10-11 14:03:24,642 [wrapper] pandaids: 6838001094
2025-10-11 15:03:26 (30392): Guest Log: 2025-10-11 14:03:24,659 [wrapper] cleanup supervisor_pilot 30983 6045
2025-10-11 15:03:26 (30392): Guest Log: 2025-10-11 14:03:24,663 [wrapper] Test setup, not cleaning
2025-10-11 15:03:26 (30392): Guest Log: 2025-10-11 14:03:24,668 [wrapper] apfmon messages muted
2025-10-11 15:03:26 (30392): Guest Log: 2025-10-11 14:03:24,670 [wrapper] ==== wrapper stdout END ====
2025-10-11 15:03:26 (30392): Guest Log: 2025-10-11 14:03:24,673 [wrapper] ==== wrapper stderr END ====
2025-10-11 15:03:26 (30392): Guest Log:  *** Error codes and diagnostics ***
2025-10-11 15:03:26 (30392): Guest Log:     "exeErrorCode": 0,
2025-10-11 15:03:26 (30392): Guest Log:     "exeErrorDiag": "",
2025-10-11 15:03:26 (30392): Guest Log:     "pilotErrorCode": 0,
2025-10-11 15:03:26 (30392): Guest Log:     "pilotErrorDiag": "",
2025-10-11 15:03:26 (30392): Guest Log:  *** Listing of results directory ***
2025-10-11 15:03:26 (30392): Guest Log: total 193080
2025-10-11 15:03:26 (30392): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 11 03:19 pilot3.tar.gz
2025-10-11 15:03:26 (30392): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 11 03:22 queuedata.json
2025-10-11 15:03:26 (30392): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 11 03:23 runpilot2-wrapper.sh
2025-10-11 15:03:26 (30392): Guest Log: -rwxr-xr-x. 1 atlas atlas      9083 Oct 11 12:52 init_data.xml
2025-10-11 15:03:26 (30392): Guest Log: -rwxr-xr-x. 1 atlas atlas    569679 Oct 11 12:52 input.tar.gz
2025-10-11 15:03:26 (30392): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 11 12:52 start_atlas.sh
2025-10-11 15:03:26 (30392): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 11 12:52 EVNT.46676267._002021.pool.root.1 -> /data/./ATLAS.root_0
2025-10-11 15:03:26 (30392): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Oct 11 12:54 pandaJob.out
2025-10-11 15:03:26 (30392): Guest Log: -rw-------. 1 atlas atlas    975504 Oct 11 12:58 agis_schedconf.cvmfs.json
2025-10-11 15:03:26 (30392): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 11 12:58 agis_ddmendpoints.agis.ALL.json
2025-10-11 15:03:26 (30392): Guest Log: drwx------. 5 atlas atlas      4096 Oct 11 12:59 pilot3
2025-10-11 15:03:26 (30392): Guest Log: -rw-------. 1 atlas atlas 192263907 Oct 11 14:01 HITS.46676269._050206.pool.root.1
2025-10-11 15:03:26 (30392): Guest Log: -rw-------. 1 atlas atlas      1028 Oct 11 14:01 memory_monitor_summary.json
2025-10-11 15:03:26 (30392): Guest Log: -rw-------. 1 atlas atlas    250879 Oct 11 14:01 log.46676269._050206.job.log.tgz.1
2025-10-11 15:03:26 (30392): Guest Log: -rw-------. 1 atlas atlas      7782 Oct 11 14:02 heartbeat.json
2025-10-11 15:03:26 (30392): Guest Log: -rw-------. 1 atlas atlas       744 Oct 11 14:03 pilotlog.txt
2025-10-11 15:03:26 (30392): Guest Log: -rw-------. 1 atlas atlas        95 Oct 11 14:03 pilot_heartbeat.json
2025-10-11 15:03:26 (30392): Guest Log: -rw-------. 1 atlas atlas    555866 Oct 11 14:03 log.46676269._050206.job.log.1
2025-10-11 15:03:26 (30392): Guest Log: -rw-------. 1 atlas atlas       357 Oct 11 14:03 output.list
2025-10-11 15:03:26 (30392): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 11 14:03 runtime_log
2025-10-11 15:03:26 (30392): Guest Log: -rw-------. 1 atlas atlas    829440 Oct 11 14:03 result.tar.gz
2025-10-11 15:03:26 (30392): Guest Log: -rw-r--r--. 1 atlas atlas      8662 Oct 11 14:03 runtime_log.err
2025-10-11 15:03:26 (30392): Guest Log: -rw-------. 1 atlas atlas       663 Oct 11 14:03 HAvLDm0NfR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzHfNDm04J6Ho.diag
2025-10-11 15:03:26 (30392): Guest Log: Looking for outputfile HITS.46676269._050206.pool.root.1
2025-10-11 15:03:26 (30392): Guest Log: HITS file was successfully produced
2025-10-11 15:03:26 (30392): Guest Log: -rw-------. 1 atlas atlas 192263907 Oct 11 14:01 /home/atlas/RunAtlas/HITS.46676269._050206.pool.root.1
2025-10-11 15:03:27 (30392): Guest Log: Successfully finished the ATLAS job!
2025-10-11 15:03:27 (30392): Guest Log: Copying the results back to the shared directory!
2025-10-11 15:03:27 (30392): Guest Log:  *** Contents of shared directory: ***
2025-10-11 15:03:27 (30392): Guest Log: total 405920
2025-10-11 15:03:27 (30392): Guest Log: -rwxrwxrwx. 1 root root 221961169 Oct 11 12:52 ATLAS.root_0
2025-10-11 15:03:27 (30392): Guest Log: -rwxrwxrwx. 1 root root 192263907 Oct 11 14:03 HITS.pool.root.1
2025-10-11 15:03:27 (30392): Guest Log: -rwxrwxrwx. 1 root root      9083 Oct 11 12:52 init_data.xml
2025-10-11 15:03:27 (30392): Guest Log: -rwxrwxrwx. 1 root root    569679 Oct 11 11:14 input.tar.gz
2025-10-11 15:03:27 (30392): Guest Log: -rwxrwxrwx. 1 root root    829440 Oct 11 14:03 result.tar.gz
2025-10-11 15:03:27 (30392): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 11 11:14 start_atlas.sh
2025-10-11 15:03:27 (30392): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-11 15:03:27 (30392): VM Completion File Detected.
2025-10-11 15:03:27 (30392): Powering off VM.
2025-10-11 15:03:27 (30392): Successfully stopped VM.
2025-10-11 15:03:27 (30392): Deregistering VM. (boinc_52327f44ce02d2dd, slot#0)
2025-10-11 15:03:27 (30392): Removing network bandwidth throttle group from VM.
2025-10-11 15:03:28 (30392): Removing VM from VirtualBox.
2025-10-11 15:03:33 (30392): called boinc_finish(0)

</stderr_txt>
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