Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:11:22 (1719560): wrapper (7.7.26015): starting
07:11:22 (1719560): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 07:11:22] Arguments: --nthreads 8
[2025-10-11 07:11:22] Threads: 8
[2025-10-11 07:11:22] Checking for CVMFS
[2025-10-11 07:11:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 07:11:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 07:11:23] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 07:11:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 07:11:23] 2.13.1.0 4140 2720 71592 151582 1 187 33572010 39288832 3416 16776704 0 9389949 99.997 93709 32891 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 07:11:23] CVMFS is ok
[2025-10-11 07:11:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 07:11:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 07:11:23] Further information can be found at the LHC@home message board.
[2025-10-11 07:11:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 07:11:23] Checking for apptainer binary...
[2025-10-11 07:11:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 07:11:23] Running /usr/bin/apptainer --version
[2025-10-11 07:11:23] apptainer version 1.4.3-1.el9
[2025-10-11 07:11:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 07:11:23] c-210-16.aglt2.org
[2025-10-11 07:11:23] apptainer works
[2025-10-11 07:11:23] Set ATHENA_PROC_NUMBER=8
[2025-10-11 07:11:23] Set ATHENA_CORE_NUMBER=8
[2025-10-11 07:11:23] Starting ATLAS job with PandaID=6827823986
[2025-10-11 07:11:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 08:37:46]  *** The last 200 lines of the pilot log: ***
[2025-10-11 08:37:46] 2025-10-11 12:36:57,116 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 08:37:46] 2025-10-11 12:36:57,116 | INFO     | summary of transferred files:
[2025-10-11 08:37:46] 2025-10-11 12:36:57,116 | INFO     |  -- lfn=log.46376905._037072.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 08:37:46] 2025-10-11 12:36:57,117 | INFO     | stage-out finished correctly
[2025-10-11 08:37:46] 2025-10-11 12:36:58,096 | INFO     | time since job start (5125s) is within the limit (172800.0s)
[2025-10-11 08:37:46] 2025-10-11 12:36:59,209 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 08:37:46] 2025-10-11 12:36:59,313 | INFO     | job 6827823986 has state=finished
[2025-10-11 08:37:46] 2025-10-11 12:36:59,314 | INFO     | preparing for final server update for job 6827823986 in state='finished'
[2025-10-11 08:37:46] 2025-10-11 12:36:59,314 | INFO     | this job has now completed (state=finished)
[2025-10-11 08:37:46] 2025-10-11 12:36:59,315 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 08:37:46] 2025-10-11 12:36:59,315 | INFO     | log transfer has been attempted: DONE
[2025-10-11 08:37:46] 2025-10-11 12:36:59,315 | INFO     | job 6827823986 has finished - writing final server update
[2025-10-11 08:37:46] 2025-10-11 12:36:59,315 | INFO     | total number of processed events: 400 (read)
[2025-10-11 08:37:46] 2025-10-11 12:36:59,316 | INFO     | executing command: lscpu
[2025-10-11 08:37:46] 2025-10-11 12:36:59,353 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 08:37:46] 2025-10-11 12:37:00,102 | INFO     | time since job start (5127s) is within the limit (172800.0s)
[2025-10-11 08:37:46] 2025-10-11 12:37:00,838 | WARNING  | process 1729983 can no longer be monitored (due to stat problems) - aborting
[2025-10-11 08:37:46] 2025-10-11 12:37:00,838 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6827823986/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 08:37:46] 2025-10-11 12:37:00,839 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6827823986/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 08:37:46] 2025-10-11 12:37:00,841 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3657528 B
[2025-10-11 08:37:46] 2025-10-11 12:37:00,841 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15297 B
[2025-10-11 08:37:46] 2025-10-11 12:37:00,841 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-11 08:37:46] 2025-10-11 12:37:01,371 | INFO     | PID=1723254 has CPU usage=9.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 08:37:46] 2025-10-11 12:37:01,372 | INFO     | .. there are 5 such processes running
[2025-10-11 08:37:46] 2025-10-11 12:37:02,373 | INFO     | time since job start (5129s) is within the limit (172800.0s)
[2025-10-11 08:37:46] 2025-10-11 12:37:02,657 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 08:37:46] 2025-10-11 12:37:02,669 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2640.1072249999993
[2025-10-11 08:37:46] 2025-10-11 12:37:02,673 | INFO     | sufficient remaining disk space (51647610880 B)
[2025-10-11 08:37:46] 2025-10-11 12:37:02,674 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-11 08:37:46] 2025-10-11 12:37:02,677 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6827823986/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 08:37:46] 2025-10-11 12:37:02,677 | INFO     | extracted standard info from prmon json
[2025-10-11 08:37:46] 2025-10-11 12:37:02,678 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 08:37:46] 2025-10-11 12:37:02,678 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 08:37:46] 2025-10-11 12:37:02,678 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 08:37:46] 2025-10-11 12:37:02,678 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 08:37:46] 2025-10-11 12:37:02,680 | INFO     | fitting pss+swap vs Time
[2025-10-11 08:37:46] 2025-10-11 12:37:02,681 | INFO     | sum of square deviations: 141539398.0
[2025-10-11 08:37:46] 2025-10-11 12:37:02,681 | INFO     | sum of deviations: 1489252292.0
[2025-10-11 08:37:46] 2025-10-11 12:37:02,681 | INFO     | mean x: 1760183739.0
[2025-10-11 08:37:46] 2025-10-11 12:37:02,682 | INFO     | mean y: 2502462.714285714
[2025-10-11 08:37:46] 2025-10-11 12:37:02,682 | INFO     | -- intersect: -18517836783.372375
[2025-10-11 08:37:46] 2025-10-11 12:37:02,682 | INFO     | intersect: -18517836783.372375
[2025-10-11 08:37:46] 2025-10-11 12:37:02,682 | INFO     | chi2: 0.0015773933638463633
[2025-10-11 08:37:46] 2025-10-11 12:37:02,682 | INFO     | -- intersect: -18517836783.372375
[2025-10-11 08:37:46] 2025-10-11 12:37:02,682 | INFO     | current memory leak: 10.52 B/s (using 77 data points, chi2=0.00)
[2025-10-11 08:37:46] 2025-10-11 12:37:02,683 | INFO     | size of work directory /tmp/boinchome/slots/2/PanDA_Pilot-6827823986: 3958331 B (within 2537553920 B limit)
[2025-10-11 08:37:46] 2025-10-11 12:37:02,683 | INFO     | could have reported an average CPU frequency of 2636 MHz (6 samples)
[2025-10-11 08:37:46] 2025-10-11 12:37:02,683 | INFO     | ..............................
[2025-10-11 08:37:46] 2025-10-11 12:37:02,683 | INFO     | pfn file=/tmp/boinchome/slots/2/PanDA_Pilot-6827823986/HITS.46376905._037072.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-11 08:37:46] 2025-10-11 12:37:02,684 | INFO     | . Timing measurements:
[2025-10-11 08:37:46] 2025-10-11 12:37:02,684 | INFO     | total size of present files: 0 B (workdir size: 3958331 B)
[2025-10-11 08:37:46] 2025-10-11 12:37:02,684 | INFO     | . get job = 0 s
[2025-10-11 08:37:46] 2025-10-11 12:37:02,684 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/2/PanDA_Pilot-6827823986/HITS.46376905._037072.pool.root.1 since it does not exist
[2025-10-11 08:37:46] 2025-10-11 12:37:02,684 | INFO     | . initial setup = 2 s
[2025-10-11 08:37:46] 2025-10-11 12:37:02,685 | INFO     | . payload setup = 4 s
[2025-10-11 08:37:46] 2025-10-11 12:37:02,685 | INFO     | . stage-in = 0 s
[2025-10-11 08:37:46] 2025-10-11 12:37:02,685 | INFO     | . payload execution = 5099 s
[2025-10-11 08:37:46] 2025-10-11 12:37:02,685 | INFO     | . stage-out = 0 s
[2025-10-11 08:37:46] 2025-10-11 12:37:02,685 | INFO     | . log creation = 0 s
[2025-10-11 08:37:46] 2025-10-11 12:37:02,685 | INFO     | ..............................
[2025-10-11 08:37:46] 2025-10-11 12:37:02,857 | INFO     | 
[2025-10-11 08:37:46] 2025-10-11 12:37:02,857 | INFO     | job summary report
[2025-10-11 08:37:46] 2025-10-11 12:37:02,858 | INFO     | --------------------------------------------------
[2025-10-11 08:37:46] 2025-10-11 12:37:02,858 | INFO     | PanDA job id: 6827823986
[2025-10-11 08:37:46] 2025-10-11 12:37:02,858 | INFO     | task id: 46376905
[2025-10-11 08:37:46] 2025-10-11 12:37:02,858 | INFO     | errors: (none)
[2025-10-11 08:37:46] 2025-10-11 12:37:02,858 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 08:37:46] 2025-10-11 12:37:02,858 | INFO     | pilot state: finished 
[2025-10-11 08:37:46] 2025-10-11 12:37:02,859 | INFO     | transexitcode: 0
[2025-10-11 08:37:46] 2025-10-11 12:37:02,859 | INFO     | exeerrorcode: 0
[2025-10-11 08:37:46] 2025-10-11 12:37:02,859 | INFO     | exeerrordiag: 
[2025-10-11 08:37:46] 2025-10-11 12:37:02,859 | INFO     | exitcode: 0
[2025-10-11 08:37:46] 2025-10-11 12:37:02,859 | INFO     | exitmsg: OK
[2025-10-11 08:37:46] 2025-10-11 12:37:02,860 | INFO     | cpuconsumptiontime: 37601 s
[2025-10-11 08:37:46] 2025-10-11 12:37:02,860 | INFO     | nevents: 400
[2025-10-11 08:37:46] 2025-10-11 12:37:02,860 | INFO     | neventsw: 0
[2025-10-11 08:37:46] 2025-10-11 12:37:02,860 | INFO     | pid: 1729983
[2025-10-11 08:37:46] 2025-10-11 12:37:02,860 | INFO     | pgrp: 1729983
[2025-10-11 08:37:46] 2025-10-11 12:37:02,860 | INFO     | corecount: 8
[2025-10-11 08:37:46] 2025-10-11 12:37:02,861 | INFO     | event service: False
[2025-10-11 08:37:46] 2025-10-11 12:37:02,861 | INFO     | sizes: {0: 2348589, 1: 2348844, 5: 2349106, 12: 2349162, 5107: 2375545, 5109: 2384543, 5111: 2384727, 5115: 2384949}
[2025-10-11 08:37:46] 2025-10-11 12:37:02,861 | INFO     | --------------------------------------------------
[2025-10-11 08:37:46] 2025-10-11 12:37:02,861 | INFO     | 
[2025-10-11 08:37:46] 2025-10-11 12:37:02,861 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-11 08:37:46] 2025-10-11 12:37:02,880 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 08:37:46] 2025-10-11 12:37:02,880 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 08:37:46] 2025-10-11 12:37:02,880 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 08:37:46] 2025-10-11 12:37:02,880 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 08:37:46] 2025-10-11 12:37:02,881 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 08:37:46] 2025-10-11 12:37:02,881 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 08:37:46] 2025-10-11 12:37:02,881 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 08:37:46] 2025-10-11 12:37:02,881 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 08:37:46] 2025-10-11 12:37:02,881 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 08:37:46] 2025-10-11 12:37:02,881 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 08:37:46] 2025-10-11 12:37:02,882 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 08:37:46] 2025-10-11 12:37:02,882 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 08:37:46] 2025-10-11 12:37:02,882 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 08:37:46] 2025-10-11 12:37:02,882 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 08:37:46] 2025-10-11 12:37:02,882 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 08:37:46] 2025-10-11 12:37:02,883 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 08:37:46] 2025-10-11 12:37:02,883 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 08:37:46] 2025-10-11 12:37:02,883 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 08:37:46] 2025-10-11 12:37:02,883 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 08:37:46] 2025-10-11 12:37:02,883 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 08:37:46] 2025-10-11 12:37:02,884 | INFO     | job 6827823986 has completed (purged errors)
[2025-10-11 08:37:46] 2025-10-11 12:37:02,884 | INFO     | overall cleanup function is called
[2025-10-11 08:37:46] 2025-10-11 12:37:03,007 | INFO     | number of running child processes to parent process 1729983: 1
[2025-10-11 08:37:46] 2025-10-11 12:37:03,007 | INFO     | maximum number of monitored processes: 6
[2025-10-11 08:37:46] 2025-10-11 12:37:03,008 | INFO     | aborting job monitoring since job object (job id=6827823986) has expired
[2025-10-11 08:37:46] 2025-10-11 12:37:03,893 | INFO     | --- collectZombieJob: --- 10, [1729983]
[2025-10-11 08:37:46] 2025-10-11 12:37:03,893 | INFO     | zombie collector waiting for pid 1729983
[2025-10-11 08:37:46] 2025-10-11 12:37:03,893 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 08:37:46] 2025-10-11 12:37:03,893 | INFO     | collected zombie processes
[2025-10-11 08:37:46] 2025-10-11 12:37:03,894 | INFO     | will attempt to kill all subprocesses of pid=1729983
[2025-10-11 08:37:46] 2025-10-11 12:37:04,108 | INFO     | process IDs to be killed: [1729983] (in reverse order)
[2025-10-11 08:37:46] 2025-10-11 12:37:04,170 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 08:37:46] 2025-10-11 12:37:04,171 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 08:37:46] 2025-10-11 12:37:04,177 | INFO     | did not find any defunct processes belonging to 1729983
[2025-10-11 08:37:46] 2025-10-11 12:37:04,182 | INFO     | did not find any defunct processes belonging to 1729983
[2025-10-11 08:37:46] 2025-10-11 12:37:04,182 | INFO     | ready for new job
[2025-10-11 08:37:46] 2025-10-11 12:37:04,183 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 08:37:46] 2025-10-11 12:37:04,184 | INFO     | ***************************************
[2025-10-11 08:37:46] 2025-10-11 12:37:04,184 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-11 08:37:46] 2025-10-11 12:37:04,185 | INFO     | ***************************************
[2025-10-11 08:37:46] 2025-10-11 12:37:04,185 | INFO     | 
[2025-10-11 08:37:46] 2025-10-11 12:37:04,187 | INFO     | architecture information:
[2025-10-11 08:37:46] 2025-10-11 12:37:04,187 | INFO     | executing command: cat /etc/os-release
[2025-10-11 08:37:46] 2025-10-11 12:37:04,200 | INFO     | cat /etc/os-release:
[2025-10-11 08:37:46] NAME="CentOS Linux"
[2025-10-11 08:37:46] VERSION="7 (Core)"
[2025-10-11 08:37:46] ID="centos"
[2025-10-11 08:37:46] ID_LIKE="rhel fedora"
[2025-10-11 08:37:46] VERSION_ID="7"
[2025-10-11 08:37:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 08:37:46] ANSI_COLOR="0;31"
[2025-10-11 08:37:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 08:37:46] HOME_URL="https://www.centos.org/"
[2025-10-11 08:37:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 08:37:46] 
[2025-10-11 08:37:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 08:37:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 08:37:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 08:37:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 08:37:46] 
[2025-10-11 08:37:46] 2025-10-11 12:37:04,201 | INFO     | ***************************************
[2025-10-11 08:37:46] 2025-10-11 12:37:04,703 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-11 08:37:46] 2025-10-11 12:37:04,717 | INFO     | sufficient remaining disk space (51650756608 B)
[2025-10-11 08:37:46] 2025-10-11 12:37:04,717 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 08:37:46] 2025-10-11 12:37:04,717 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 08:37:46] 2025-10-11 12:37:04,718 | INFO     | update_server=False
[2025-10-11 08:37:46] 2025-10-11 12:37:04,718 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 08:37:46] 2025-10-11 12:37:04,718 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 08:37:46] 2025-10-11 12:37:04,718 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 08:37:46] 2025-10-11 12:37:04,719 | INFO     | aborting loop
[2025-10-11 08:37:46] 2025-10-11 12:37:05,172 | INFO     | all data control threads have been joined
[2025-10-11 08:37:46] 2025-10-11 12:37:05,242 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 08:37:46] 2025-10-11 12:37:05,311 | INFO     | all payload control threads have been joined
[2025-10-11 08:37:46] 2025-10-11 12:37:05,319 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 08:37:46] 2025-10-11 12:37:05,512 | INFO     | all job control threads have been joined
[2025-10-11 08:37:46] 2025-10-11 12:37:05,720 | INFO     | [job] retrieve thread has finished
[2025-10-11 08:37:46] 2025-10-11 12:37:05,724 | INFO     | [job] queue monitor thread has finished
[2025-10-11 08:37:46] 2025-10-11 12:37:05,724 | INFO     | [job] job monitor thread has finished
[2025-10-11 08:37:46] 2025-10-11 12:37:06,013 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 08:37:46] 2025-10-11 12:37:06,027 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 08:37:46] 2025-10-11 12:37:06,178 | INFO     | [data] control thread has finished
[2025-10-11 08:37:46] 2025-10-11 12:37:06,311 | INFO     | [payload] validate_post thread has finished
[2025-10-11 08:37:46] 2025-10-11 12:37:06,317 | INFO     | [payload] control thread has finished
[2025-10-11 08:37:46] 2025-10-11 12:37:06,518 | INFO     | [job] control thread has finished
[2025-10-11 08:37:46] 2025-10-11 12:37:06,674 | INFO     | [data] copytool_in thread has finished
[2025-10-11 08:37:46] 2025-10-11 12:37:06,839 | INFO     | [payload] failed_post thread has finished
[2025-10-11 08:37:46] 2025-10-11 12:37:07,096 | INFO     | [job] validate thread has finished
[2025-10-11 08:37:46] 2025-10-11 12:37:07,106 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 08:37:46] 2025-10-11 12:37:07,247 | INFO     | [data] copytool_out thread has finished
[2025-10-11 08:37:46] 2025-10-11 12:37:09,324 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 08:37:46] 2025-10-11 12:37:14,922 | INFO     | job.realtimelogging is not enabled
[2025-10-11 08:37:46] 2025-10-11 12:37:15,927 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 08:37:46] 2025-10-11 12:37:34,439 | INFO     | 5133s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-11 08:37:46] 2025-10-11 12:37:35,706 | INFO     | PID=1723254 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 08:37:46] 2025-10-11 12:37:35,706 | INFO     | .. there are 5 such processes running
[2025-10-11 08:37:46] 2025-10-11 12:37:35,706 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 08:37:46] 2025-10-11 12:37:35,706 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 08:37:46] 2025-10-11 12:37:35,706 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 08:37:46] 2025-10-11 12:37:41,106 | INFO     | [monitor] cgroup control has ended
[2025-10-11 08:37:46] 2025-10-11 12:37:41,410 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139884523693888)>', '<ExcThread(monitor, started 139884031358720)>']
[2025-10-11 08:37:46] 2025-10-11 12:37:41,722 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 08:37:46] 2025-10-11 12:37:41,722 | INFO     | [monitor] control thread has ended
[2025-10-11 08:37:46] 2025-10-11 12:37:46,436 | INFO     | all workflow threads have been joined
[2025-10-11 08:37:46] 2025-10-11 12:37:46,436 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 08:37:46] 2025-10-11 12:37:46,436 | INFO     | traces error code: 0
[2025-10-11 08:37:46] 2025-10-11 12:37:46,437 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 08:37:46] 2025-10-11 12:37:46,546 [wrapper] ==== pilot stdout END ====
[2025-10-11 08:37:46] 2025-10-11 12:37:46,549 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 08:37:46] 2025-10-11 12:37:46,551 [wrapper] pilotpid: 1723254
[2025-10-11 08:37:46] 2025-10-11 12:37:46,554 [wrapper] Pilot exit status: 0
[2025-10-11 08:37:46] 2025-10-11 12:37:46,563 [wrapper] pandaids: 6827823986
[2025-10-11 08:37:46] 2025-10-11 12:37:46,603 [wrapper] cleanup supervisor_pilot 1876581 1723255
[2025-10-11 08:37:46] 2025-10-11 12:37:46,605 [wrapper] Test setup, not cleaning
[2025-10-11 08:37:46] 2025-10-11 12:37:46,608 [wrapper] apfmon messages muted
[2025-10-11 08:37:46] 2025-10-11 12:37:46,610 [wrapper] ==== wrapper stdout END ====
[2025-10-11 08:37:46] 2025-10-11 12:37:46,613 [wrapper] ==== wrapper stderr END ====
[2025-10-11 08:37:46]  *** Error codes and diagnostics ***
[2025-10-11 08:37:46]     "exeErrorCode": 0,
[2025-10-11 08:37:46]     "exeErrorDiag": "",
[2025-10-11 08:37:46]     "pilotErrorCode": 0,
[2025-10-11 08:37:46]     "pilotErrorDiag": "",
[2025-10-11 08:37:46]  *** Listing of results directory ***
[2025-10-11 08:37:46] total 387784
[2025-10-11 08:37:46] -rwx------. 1 boincer umatlas     36292 Oct  3 00:13 runpilot2-wrapper.sh
[2025-10-11 08:37:46] -rw-r--r--. 1 boincer umatlas      5112 Oct  3 00:13 queuedata.json
[2025-10-11 08:37:46] -rw-r--r--. 1 boincer umatlas    552446 Oct  3 00:13 pilot3.tar.gz
[2025-10-11 08:37:46] -rw-r--r--. 1 boincer umatlas       100 Oct 11 07:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 08:37:46] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 07:11 run_atlas
[2025-10-11 08:37:46] -rw-r--r--. 1 boincer umatlas       105 Oct 11 07:11 job.xml
[2025-10-11 08:37:46] -rw-r--r--. 2 boincer umatlas 213875384 Oct 11 07:11 EVNT.46376901._001249.pool.root.1
[2025-10-11 08:37:46] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 07:11 start_atlas.sh
[2025-10-11 08:37:46] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 07:11 shared
[2025-10-11 08:37:46] -rw-r--r--. 2 boincer umatlas    565590 Oct 11 07:11 input.tar.gz
[2025-10-11 08:37:46] -rw-r--r--. 1 boincer umatlas         0 Oct 11 07:11 boinc_lockfile
[2025-10-11 08:37:46] -rw-r--r--. 1 boincer umatlas      2519 Oct 11 07:11 pandaJob.out
[2025-10-11 08:37:46] -rw-------. 1 boincer umatlas    975517 Oct 11 07:11 agis_schedconf.cvmfs.json
[2025-10-11 08:37:46] -rw-------. 1 boincer umatlas   1560580 Oct 11 07:11 agis_ddmendpoints.agis.ALL.json
[2025-10-11 08:37:46] drwx------. 4 boincer umatlas      4096 Oct 11 07:11 pilot3
[2025-10-11 08:37:46] -rw-r--r--. 1 boincer umatlas      6659 Oct 11 08:30 init_data.xml
[2025-10-11 08:37:46] -rw-------. 1 boincer umatlas 177129782 Oct 11 08:36 HITS.46376905._037072.pool.root.1
[2025-10-11 08:37:46] -rw-r--r--. 1 boincer umatlas       529 Oct 11 08:36 boinc_task_state.xml
[2025-10-11 08:37:46] -rw-------. 1 boincer umatlas      1046 Oct 11 08:36 memory_monitor_summary.json
[2025-10-11 08:37:46] -rw-------. 1 boincer umatlas    345080 Oct 11 08:36 log.46376905._037072.job.log.tgz.1
[2025-10-11 08:37:46] -rw-------. 1 boincer umatlas        95 Oct 11 08:37 pilot_heartbeat.json
[2025-10-11 08:37:46] -rw-------. 1 boincer umatlas      7817 Oct 11 08:37 heartbeat.json
[2025-10-11 08:37:46] -rw-------. 1 boincer umatlas      5010 Oct 11 08:37 pilotlog.txt
[2025-10-11 08:37:46] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 08:37 boinc_mmap_file
[2025-10-11 08:37:46] -rw-r--r--. 1 boincer umatlas        27 Oct 11 08:37 wrapper_checkpoint.txt
[2025-10-11 08:37:46] -rw-------. 1 boincer umatlas    751602 Oct 11 08:37 log.46376905._037072.job.log.1
[2025-10-11 08:37:46] -rw-------. 1 boincer umatlas       357 Oct 11 08:37 output.list
[2025-10-11 08:37:46] -rw-r--r--. 1 boincer umatlas       620 Oct 11 08:37 runtime_log
[2025-10-11 08:37:46] -rw-------. 1 boincer umatlas   1116160 Oct 11 08:37 result.tar.gz
[2025-10-11 08:37:46] -rw-------. 1 boincer umatlas       651 Oct 11 08:37 uI1NDmFMmO8n9Rq4apOajLDm4fhM0noT9bVof3QYDmFhAMDme9ypPm.diag
[2025-10-11 08:37:46] -rw-r--r--. 1 boincer umatlas      8703 Oct 11 08:37 runtime_log.err
[2025-10-11 08:37:46] -rw-r--r--. 1 boincer umatlas     22499 Oct 11 08:37 stderr.txt
[2025-10-11 08:37:46] HITS file was successfully produced:
[2025-10-11 08:37:46] -rw-------. 1 boincer umatlas 177129782 Oct 11 08:36 shared/HITS.pool.root.1
[2025-10-11 08:37:46]  *** Contents of shared directory: ***
[2025-10-11 08:37:46] total 383512
[2025-10-11 08:37:46] -rw-r--r--. 2 boincer umatlas 213875384 Oct 11 07:11 ATLAS.root_0
[2025-10-11 08:37:46] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 07:11 start_atlas.sh
[2025-10-11 08:37:46] -rw-r--r--. 2 boincer umatlas    565590 Oct 11 07:11 input.tar.gz
[2025-10-11 08:37:46] -rw-------. 1 boincer umatlas 177129782 Oct 11 08:36 HITS.pool.root.1
[2025-10-11 08:37:46] -rw-------. 1 boincer umatlas   1116160 Oct 11 08:37 result.tar.gz
08:37:48 (1719560): run_atlas exited; CPU time 37708.231950
08:37:48 (1719560): called boinc_finish(0)

</stderr_txt>
]]>

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