Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
17:02:48 (1603455): wrapper (7.7.26015): starting
17:02:48 (1603455): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 17:02:48] Arguments: --nthreads 3
[2025-10-12 17:02:48] Threads: 3
[2025-10-12 17:02:48] Checking for CVMFS
[2025-10-12 17:02:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 17:02:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 17:02:48] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 17:02:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 17:02:48] 2.9.2.0 1535135 87 38996 151623 1 57 4593364 36864001 0 130560 0 65712 99.994 3956 5532 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 17:02:48] CVMFS is ok
[2025-10-12 17:02:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 17:02:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 17:02:48] Further information can be found at the LHC@home message board.
[2025-10-12 17:02:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 17:02:48] Checking for apptainer binary...
[2025-10-12 17:02:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 17:02:48] Running /usr/bin/apptainer --version
[2025-10-12 17:02:49] apptainer version 1.4.1-1.1
[2025-10-12 17:02:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 17:02:49] thA363a
[2025-10-12 17:02:49] apptainer works
[2025-10-12 17:02:49] Set ATHENA_PROC_NUMBER=3
[2025-10-12 17:02:49] Set ATHENA_CORE_NUMBER=3
[2025-10-12 17:02:49] Starting ATLAS job with PandaID=6838001105
[2025-10-12 17:02:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 18:28:07]  *** The last 200 lines of the pilot log: ***
[2025-10-12 18:28:07]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6838001105/log.46676269._050217.job.log.tgz.1
[2025-10-12 18:28:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1b/32/log.46676269._050217.job.log.tgz.1
[2025-10-12 18:28:07]  workdir=None
[2025-10-12 18:28:07] ]
[2025-10-12 18:28:07] 2025-10-12 16:27:19,444 | INFO     | transferring file log.46676269._050217.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6838001105/log.46676269._050217.job.log.tgz.1 to /local/data/boinc/
[2025-10-12 18:28:07] 2025-10-12 16:27:19,444 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6838001105/log.46676269._050217.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0502
[2025-10-12 18:28:07] 2025-10-12 16:27:19,458 | INFO     | adding to output.list: log.46676269._050217.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1b/32/log.46676269._050217.job.log.tg
[2025-10-12 18:28:07] 2025-10-12 16:27:19,458 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 18:28:07] 2025-10-12 16:27:19,458 | INFO     | summary of transferred files:
[2025-10-12 18:28:07] 2025-10-12 16:27:19,458 | INFO     |  -- lfn=log.46676269._050217.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 18:28:07] 2025-10-12 16:27:19,458 | INFO     | stage-out finished correctly
[2025-10-12 18:28:07] 2025-10-12 16:27:19,971 | INFO     | time since job start (5064s) is within the limit (172800.0s)
[2025-10-12 18:28:07] 2025-10-12 16:27:20,257 | INFO     | monitor loop #389: job 0:6838001105 is in state 'finished'
[2025-10-12 18:28:07] 2025-10-12 16:27:20,257 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:28:07] 2025-10-12 16:27:21,040 | INFO     | PID=1607230 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 18:28:07] 2025-10-12 16:27:22,041 | INFO     | time since job start (5067s) is within the limit (172800.0s)
[2025-10-12 18:28:07] 2025-10-12 16:27:22,760 | INFO     | monitor loop #390: job 0:6838001105 is in state 'finished'
[2025-10-12 18:28:07] 2025-10-12 16:27:22,760 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:28:07] 2025-10-12 16:27:22,819 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 18:28:07] 2025-10-12 16:27:23,728 | INFO     | job 6838001105 has state=finished
[2025-10-12 18:28:07] 2025-10-12 16:27:23,728 | INFO     | preparing for final server update for job 6838001105 in state='finished'
[2025-10-12 18:28:07] 2025-10-12 16:27:23,728 | INFO     | this job has now completed (state=finished)
[2025-10-12 18:28:07] 2025-10-12 16:27:23,728 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 18:28:07] 2025-10-12 16:27:23,728 | INFO     | log transfer has been attempted: DONE
[2025-10-12 18:28:07] 2025-10-12 16:27:23,728 | INFO     | job 6838001105 has finished - writing final server update
[2025-10-12 18:28:07] 2025-10-12 16:27:23,729 | INFO     | total number of processed events: 400 (read)
[2025-10-12 18:28:07] 2025-10-12 16:27:23,729 | INFO     | executing command: lscpu
[2025-10-12 18:28:07] 2025-10-12 16:27:23,744 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 18:28:07] 2025-10-12 16:27:24,044 | INFO     | time since job start (5069s) is within the limit (172800.0s)
[2025-10-12 18:28:07] 2025-10-12 16:27:24,045 | INFO     | 5070s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-12 18:28:07] 2025-10-12 16:27:25,263 | INFO     | monitor loop #391: job 0:6838001105 is in state 'finished'
[2025-10-12 18:28:07] 2025-10-12 16:27:25,263 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:28:07] 2025-10-12 16:27:26,049 | INFO     | time since job start (5071s) is within the limit (172800.0s)
[2025-10-12 18:28:07] 2025-10-12 16:27:27,766 | INFO     | monitor loop #392: job 0:6838001105 is in state 'finished'
[2025-10-12 18:28:07] 2025-10-12 16:27:27,766 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:28:07] 2025-10-12 16:27:28,054 | INFO     | time since job start (5073s) is within the limit (172800.0s)
[2025-10-12 18:28:07] 2025-10-12 16:27:28,943 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 18:28:07] 2025-10-12 16:27:28,944 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3852.891083333334
[2025-10-12 18:28:07] 2025-10-12 16:27:28,945 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6838001105/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 18:28:07] 2025-10-12 16:27:28,945 | INFO     | extracted standard info from prmon json
[2025-10-12 18:28:07] 2025-10-12 16:27:28,945 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 18:28:07] 2025-10-12 16:27:28,945 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 18:28:07] 2025-10-12 16:27:28,945 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 18:28:07] 2025-10-12 16:27:28,945 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:28:07] 2025-10-12 16:27:28,946 | INFO     | fitting pss+swap vs Time
[2025-10-12 18:28:07] 2025-10-12 16:27:28,946 | INFO     | sum of square deviations: 136095575.0
[2025-10-12 18:28:07] 2025-10-12 16:27:28,946 | INFO     | sum of deviations: -2250544248.0
[2025-10-12 18:28:07] 2025-10-12 16:27:28,946 | INFO     | mean x: 1760283986.5
[2025-10-12 18:28:07] 2025-10-12 16:27:28,946 | INFO     | mean y: 2350275.710526316
[2025-10-12 18:28:07] 2025-10-12 16:27:28,946 | INFO     | -- intersect: 29111283469.637547
[2025-10-12 18:28:07] 2025-10-12 16:27:28,946 | INFO     | intersect: 29111283469.637547
[2025-10-12 18:28:07] 2025-10-12 16:27:28,946 | INFO     | chi2: 0.08711662711924859
[2025-10-12 18:28:07] 2025-10-12 16:27:28,946 | INFO     | -- intersect: 29111283469.637547
[2025-10-12 18:28:07] 2025-10-12 16:27:28,946 | INFO     | current memory leak: -16.54 B/s (using 76 data points, chi2=0.09)
[2025-10-12 18:28:07] 2025-10-12 16:27:28,946 | INFO     | could have reported an average CPU frequency of 3997 MHz (6 samples)
[2025-10-12 18:28:07] 2025-10-12 16:27:28,947 | INFO     | ..............................
[2025-10-12 18:28:07] 2025-10-12 16:27:28,947 | INFO     | . Timing measurements:
[2025-10-12 18:28:07] 2025-10-12 16:27:28,947 | INFO     | . get job = 0 s
[2025-10-12 18:28:07] 2025-10-12 16:27:28,947 | INFO     | . initial setup = 1 s
[2025-10-12 18:28:07] 2025-10-12 16:27:28,947 | INFO     | . payload setup = 2 s
[2025-10-12 18:28:07] 2025-10-12 16:27:28,947 | INFO     | . stage-in = 0 s
[2025-10-12 18:28:07] 2025-10-12 16:27:28,947 | INFO     | . payload execution = 5044 s
[2025-10-12 18:28:07] 2025-10-12 16:27:28,947 | INFO     | . stage-out = 0 s
[2025-10-12 18:28:07] 2025-10-12 16:27:28,947 | INFO     | . log creation = 0 s
[2025-10-12 18:28:07] 2025-10-12 16:27:28,947 | INFO     | ..............................
[2025-10-12 18:28:07] 2025-10-12 16:27:29,249 | INFO     | 
[2025-10-12 18:28:07] 2025-10-12 16:27:29,249 | INFO     | job summary report
[2025-10-12 18:28:07] 2025-10-12 16:27:29,249 | INFO     | --------------------------------------------------
[2025-10-12 18:28:07] 2025-10-12 16:27:29,249 | INFO     | PanDA job id: 6838001105
[2025-10-12 18:28:07] 2025-10-12 16:27:29,249 | INFO     | task id: 46676269
[2025-10-12 18:28:07] 2025-10-12 16:27:29,249 | INFO     | errors: (none)
[2025-10-12 18:28:07] 2025-10-12 16:27:29,249 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 18:28:07] 2025-10-12 16:27:29,249 | INFO     | pilot state: finished 
[2025-10-12 18:28:07] 2025-10-12 16:27:29,249 | INFO     | transexitcode: 0
[2025-10-12 18:28:07] 2025-10-12 16:27:29,249 | INFO     | exeerrorcode: 0
[2025-10-12 18:28:07] 2025-10-12 16:27:29,250 | INFO     | exeerrordiag: 
[2025-10-12 18:28:07] 2025-10-12 16:27:29,250 | INFO     | exitcode: 0
[2025-10-12 18:28:07] 2025-10-12 16:27:29,250 | INFO     | exitmsg: OK
[2025-10-12 18:28:07] 2025-10-12 16:27:29,250 | INFO     | cpuconsumptiontime: 14462 s
[2025-10-12 18:28:07] 2025-10-12 16:27:29,250 | INFO     | nevents: 400
[2025-10-12 18:28:07] 2025-10-12 16:27:29,250 | INFO     | neventsw: 0
[2025-10-12 18:28:07] 2025-10-12 16:27:29,250 | INFO     | pid: 1613741
[2025-10-12 18:28:07] 2025-10-12 16:27:29,250 | INFO     | pgrp: 1613741
[2025-10-12 18:28:07] 2025-10-12 16:27:29,250 | INFO     | corecount: 3
[2025-10-12 18:28:07] 2025-10-12 16:27:29,250 | INFO     | event service: False
[2025-10-12 18:28:07] 2025-10-12 16:27:29,250 | INFO     | sizes: {0: 2348854, 3: 2349116, 11: 2349144, 5051: 2384642, 5055: 2384642, 5061: 2384836}
[2025-10-12 18:28:07] 2025-10-12 16:27:29,250 | INFO     | --------------------------------------------------
[2025-10-12 18:28:07] 2025-10-12 16:27:29,250 | INFO     | 
[2025-10-12 18:28:07] 2025-10-12 16:27:29,250 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-12 18:28:07] 2025-10-12 16:27:29,262 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 18:28:07] 2025-10-12 16:27:29,263 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 18:28:07] 2025-10-12 16:27:29,263 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 18:28:07] 2025-10-12 16:27:29,263 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 18:28:07] 2025-10-12 16:27:29,263 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 18:28:07] 2025-10-12 16:27:29,263 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 18:28:07] 2025-10-12 16:27:29,263 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 18:28:07] 2025-10-12 16:27:29,263 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 18:28:07] 2025-10-12 16:27:29,263 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 18:28:07] 2025-10-12 16:27:29,263 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 18:28:07] 2025-10-12 16:27:29,263 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 18:28:07] 2025-10-12 16:27:29,263 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 18:28:07] 2025-10-12 16:27:29,263 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 18:28:07] 2025-10-12 16:27:29,263 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 18:28:07] 2025-10-12 16:27:29,263 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 18:28:07] 2025-10-12 16:27:29,263 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 18:28:07] 2025-10-12 16:27:29,263 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 18:28:07] 2025-10-12 16:27:29,263 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 18:28:07] 2025-10-12 16:27:29,263 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 18:28:07] 2025-10-12 16:27:29,263 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 18:28:07] 2025-10-12 16:27:29,263 | INFO     | job 6838001105 has completed (purged errors)
[2025-10-12 18:28:07] 2025-10-12 16:27:29,263 | INFO     | overall cleanup function is called
[2025-10-12 18:28:07] 2025-10-12 16:27:30,269 | INFO     | --- collectZombieJob: --- 10, [1613741]
[2025-10-12 18:28:07] 2025-10-12 16:27:30,269 | INFO     | zombie collector waiting for pid 1613741
[2025-10-12 18:28:07] 2025-10-12 16:27:30,269 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 18:28:07] 2025-10-12 16:27:30,269 | INFO     | collected zombie processes
[2025-10-12 18:28:07] 2025-10-12 16:27:30,269 | INFO     | will attempt to kill all subprocesses of pid=1613741
[2025-10-12 18:28:07] 2025-10-12 16:27:30,320 | INFO     | process IDs to be killed: [1613741] (in reverse order)
[2025-10-12 18:28:07] 2025-10-12 16:27:30,347 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 18:28:07] 2025-10-12 16:27:30,347 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 18:28:07] 2025-10-12 16:27:30,349 | INFO     | did not find any defunct processes belonging to 1613741
[2025-10-12 18:28:07] 2025-10-12 16:27:30,350 | INFO     | did not find any defunct processes belonging to 1613741
[2025-10-12 18:28:07] 2025-10-12 16:27:30,351 | INFO     | ready for new job
[2025-10-12 18:28:07] 2025-10-12 16:27:30,351 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 18:28:07] 2025-10-12 16:27:30,351 | INFO     | ***************************************
[2025-10-12 18:28:07] 2025-10-12 16:27:30,351 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-12 18:28:07] 2025-10-12 16:27:30,351 | INFO     | ***************************************
[2025-10-12 18:28:07] 2025-10-12 16:27:30,351 | INFO     | 
[2025-10-12 18:28:07] 2025-10-12 16:27:30,352 | INFO     | architecture information:
[2025-10-12 18:28:07] 2025-10-12 16:27:30,352 | INFO     | executing command: cat /etc/os-release
[2025-10-12 18:28:07] 2025-10-12 16:27:30,361 | INFO     | cat /etc/os-release:
[2025-10-12 18:28:07] NAME="CentOS Linux"
[2025-10-12 18:28:07] VERSION="7 (Core)"
[2025-10-12 18:28:07] ID="centos"
[2025-10-12 18:28:07] ID_LIKE="rhel fedora"
[2025-10-12 18:28:07] VERSION_ID="7"
[2025-10-12 18:28:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 18:28:07] ANSI_COLOR="0;31"
[2025-10-12 18:28:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 18:28:07] HOME_URL="https://www.centos.org/"
[2025-10-12 18:28:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 18:28:07] 
[2025-10-12 18:28:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 18:28:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 18:28:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 18:28:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 18:28:07] 
[2025-10-12 18:28:07] 2025-10-12 16:27:30,361 | INFO     | ***************************************
[2025-10-12 18:28:07] 2025-10-12 16:27:30,862 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 18:28:07] 2025-10-12 16:27:30,874 | INFO     | sufficient remaining disk space (254873174016 B)
[2025-10-12 18:28:07] 2025-10-12 16:27:30,874 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 18:28:07] 2025-10-12 16:27:30,874 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 18:28:07] 2025-10-12 16:27:30,874 | INFO     | update_server=False
[2025-10-12 18:28:07] 2025-10-12 16:27:30,874 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 18:28:07] 2025-10-12 16:27:30,875 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:28:07] 2025-10-12 16:27:30,875 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 18:28:07] 2025-10-12 16:27:31,275 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:28:07] 2025-10-12 16:27:31,275 | INFO     | aborting loop
[2025-10-12 18:28:07] 2025-10-12 16:27:31,481 | INFO     | all data control threads have been joined
[2025-10-12 18:28:07] 2025-10-12 16:27:31,713 | INFO     | all payload control threads have been joined
[2025-10-12 18:28:07] 2025-10-12 16:27:31,880 | INFO     | [job] retrieve thread has finished
[2025-10-12 18:28:07] 2025-10-12 16:27:31,880 | INFO     | [job] queue monitor thread has finished
[2025-10-12 18:28:07] 2025-10-12 16:27:31,949 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 18:28:07] 2025-10-12 16:27:32,209 | INFO     | all job control threads have been joined
[2025-10-12 18:28:07] 2025-10-12 16:27:32,280 | INFO     | [job] job monitor thread has finished
[2025-10-12 18:28:07] 2025-10-12 16:27:32,486 | INFO     | [data] control thread has finished
[2025-10-12 18:28:07] 2025-10-12 16:27:32,509 | INFO     | [payload] failed_post thread has finished
[2025-10-12 18:28:07] 2025-10-12 16:27:32,718 | INFO     | [payload] control thread has finished
[2025-10-12 18:28:07] 2025-10-12 16:27:32,745 | INFO     | [data] copytool_in thread has finished
[2025-10-12 18:28:07] 2025-10-12 16:27:32,880 | INFO     | [data] copytool_out thread has finished
[2025-10-12 18:28:07] 2025-10-12 16:27:33,009 | INFO     | [payload] validate_post thread has finished
[2025-10-12 18:28:07] 2025-10-12 16:27:33,164 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 18:28:07] 2025-10-12 16:27:33,214 | INFO     | [job] control thread has finished
[2025-10-12 18:28:07] 2025-10-12 16:27:33,264 | INFO     | [job] validate thread has finished
[2025-10-12 18:28:07] 2025-10-12 16:27:33,279 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 18:28:07] 2025-10-12 16:27:33,355 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 18:28:07] 2025-10-12 16:27:37,361 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 18:28:07] 2025-10-12 16:27:41,026 | INFO     | job.realtimelogging is not enabled
[2025-10-12 18:28:07] 2025-10-12 16:27:42,031 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 18:28:07] 2025-10-12 16:28:01,186 | INFO     | PID=1607230 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 18:28:07] 2025-10-12 16:28:01,186 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 18:28:07] 2025-10-12 16:28:01,186 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 18:28:07] 2025-10-12 16:28:01,186 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 18:28:07] 2025-10-12 16:28:01,370 | INFO     | [monitor] cgroup control has ended
[2025-10-12 18:28:07] 2025-10-12 16:28:02,778 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139880298059584)>', '<ExcThread(monitor, started 139879300200192)>']
[2025-10-12 18:28:07] 2025-10-12 16:28:03,196 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 18:28:07] 2025-10-12 16:28:03,196 | INFO     | [monitor] control thread has ended
[2025-10-12 18:28:07] 2025-10-12 16:28:07,781 | INFO     | all workflow threads have been joined
[2025-10-12 18:28:07] 2025-10-12 16:28:07,781 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 18:28:07] 2025-10-12 16:28:07,781 | INFO     | traces error code: 0
[2025-10-12 18:28:07] 2025-10-12 16:28:07,782 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 18:28:07] 2025-10-12 16:28:07,832 [wrapper] ==== pilot stdout END ====
[2025-10-12 18:28:07] 2025-10-12 16:28:07,835 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 18:28:07] 2025-10-12 16:28:07,837 [wrapper] pilotpid: 1607230
[2025-10-12 18:28:07] 2025-10-12 16:28:07,839 [wrapper] Pilot exit status: 0
[2025-10-12 18:28:07] 2025-10-12 16:28:07,848 [wrapper] pandaids: 6838001105
[2025-10-12 18:28:07] 2025-10-12 16:28:07,867 [wrapper] cleanup supervisor_pilot 1658412 1607231
[2025-10-12 18:28:07] 2025-10-12 16:28:07,869 [wrapper] Test setup, not cleaning
[2025-10-12 18:28:07] 2025-10-12 16:28:07,871 [wrapper] apfmon messages muted
[2025-10-12 18:28:07] 2025-10-12 16:28:07,873 [wrapper] ==== wrapper stdout END ====
[2025-10-12 18:28:07] 2025-10-12 16:28:07,876 [wrapper] ==== wrapper stderr END ====
[2025-10-12 18:28:07]  *** Error codes and diagnostics ***
[2025-10-12 18:28:07]     "exeErrorCode": 0,
[2025-10-12 18:28:07]     "exeErrorDiag": "",
[2025-10-12 18:28:07]     "pilotErrorCode": 0,
[2025-10-12 18:28:07]     "pilotErrorDiag": "",
[2025-10-12 18:28:07]  *** Listing of results directory ***
[2025-10-12 18:28:07] total 412832
[2025-10-12 18:28:07] -rw-r--r-- 1 boinc boinc    563267 Oct  7 09:02 pilot3.tar.gz
[2025-10-12 18:28:07] -rw-r--r-- 1 boinc boinc      5112 Oct 11 05:22 queuedata.json
[2025-10-12 18:28:07] -rwx------ 1 boinc boinc     36292 Oct 11 05:23 runpilot2-wrapper.sh
[2025-10-12 18:28:07] -rw-r--r-- 1 boinc boinc       100 Oct 12 17:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 18:28:07] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 17:02 run_atlas
[2025-10-12 18:28:07] -rw-r--r-- 1 boinc boinc       105 Oct 12 17:02 job.xml
[2025-10-12 18:28:07] -rw-r--r-- 2 boinc boinc 223220103 Oct 12 17:02 EVNT.46676267._002022.pool.root.1
[2025-10-12 18:28:07] drwxrwx--x 2 boinc boinc      4096 Oct 12 17:02 shared
[2025-10-12 18:28:07] -rw-r--r-- 2 boinc boinc    576707 Oct 12 17:02 input.tar.gz
[2025-10-12 18:28:07] -rw-r--r-- 2 boinc boinc     15120 Oct 12 17:02 start_atlas.sh
[2025-10-12 18:28:07] -rw-r--r-- 1 boinc boinc         0 Oct 12 17:02 boinc_setup_complete
[2025-10-12 18:28:07] -rw-r--r-- 1 boinc boinc      6437 Oct 12 17:02 init_data.xml
[2025-10-12 18:28:07] -rw-r--r-- 1 boinc boinc         0 Oct 12 17:02 boinc_lockfile
[2025-10-12 18:28:07] -rw-r--r-- 1 boinc boinc      2547 Oct 12 17:02 pandaJob.out
[2025-10-12 18:28:07] -rw------- 1 boinc boinc    975528 Oct 12 17:02 agis_schedconf.cvmfs.json
[2025-10-12 18:28:07] -rw------- 1 boinc boinc   1560580 Oct 12 17:02 agis_ddmendpoints.agis.ALL.json
[2025-10-12 18:28:07] drwx------ 4 boinc boinc      4096 Oct 12 17:02 pilot3
[2025-10-12 18:28:07] -rw-r--r-- 1 boinc boinc       529 Oct 12 18:26 boinc_task_state.xml
[2025-10-12 18:28:07] -rw------- 1 boinc boinc 193639559 Oct 12 18:27 HITS.46676269._050217.pool.root.1
[2025-10-12 18:28:07] -rw------- 1 boinc boinc      1037 Oct 12 18:27 memory_monitor_summary.json
[2025-10-12 18:28:07] -rw------- 1 boinc boinc    240146 Oct 12 18:27 log.46676269._050217.job.log.tgz.1
[2025-10-12 18:28:07] -rw------- 1 boinc boinc        95 Oct 12 18:27 pilot_heartbeat.json
[2025-10-12 18:28:07] -rw------- 1 boinc boinc      7785 Oct 12 18:27 heartbeat.json
[2025-10-12 18:28:07] -rw-r--r-- 1 boinc boinc      8192 Oct 12 18:27 boinc_mmap_file
[2025-10-12 18:28:07] -rw-r--r-- 1 boinc boinc        27 Oct 12 18:27 wrapper_checkpoint.txt
[2025-10-12 18:28:07] -rw------- 1 boinc boinc      4824 Oct 12 18:28 pilotlog.txt
[2025-10-12 18:28:07] -rw------- 1 boinc boinc    740539 Oct 12 18:28 log.46676269._050217.job.log.1
[2025-10-12 18:28:07] -rw------- 1 boinc boinc       357 Oct 12 18:28 output.list
[2025-10-12 18:28:07] -rw-r--r-- 1 boinc boinc       620 Oct 12 18:28 runtime_log
[2025-10-12 18:28:07] -rw------- 1 boinc boinc   1003520 Oct 12 18:28 result.tar.gz
[2025-10-12 18:28:07] -rw-r--r-- 1 boinc boinc      8782 Oct 12 18:28 runtime_log.err
[2025-10-12 18:28:07] -rw------- 1 boinc boinc       664 Oct 12 18:28 d58LDm0NfR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmAIfNDmJzMPsm.diag
[2025-10-12 18:28:07] -rw-r--r-- 1 boinc boinc     22352 Oct 12 18:28 stderr.txt
[2025-10-12 18:28:07] HITS file was successfully produced:
[2025-10-12 18:28:07] -rw------- 1 boinc boinc 193639559 Oct 12 18:27 shared/HITS.pool.root.1
[2025-10-12 18:28:07]  *** Contents of shared directory: ***
[2025-10-12 18:28:07] total 408664
[2025-10-12 18:28:07] -rw-r--r-- 2 boinc boinc 223220103 Oct 12 17:02 ATLAS.root_0
[2025-10-12 18:28:07] -rw-r--r-- 2 boinc boinc    576707 Oct 12 17:02 input.tar.gz
[2025-10-12 18:28:07] -rw-r--r-- 2 boinc boinc     15120 Oct 12 17:02 start_atlas.sh
[2025-10-12 18:28:07] -rw------- 1 boinc boinc 193639559 Oct 12 18:27 HITS.pool.root.1
[2025-10-12 18:28:07] -rw------- 1 boinc boinc   1003520 Oct 12 18:28 result.tar.gz
18:28:09 (1603455): run_atlas exited; CPU time 14481.779622
18:28:09 (1603455): called boinc_finish(0)

</stderr_txt>
]]>

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