Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
22:06:39 (2606639): wrapper (7.7.26015): starting
22:06:39 (2606639): wrapper: running run_atlas (--nthreads 3)
[2025-10-11 22:06:39] Arguments: --nthreads 3
[2025-10-11 22:06:39] Threads: 3
[2025-10-11 22:06:39] Checking for CVMFS
[2025-10-11 22:06:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 22:06:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 22:06:39] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 22:06:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 22:06:39] 2.9.2.0 796922 3362 83288 151594 1 57 32537631 36864001 0 130560 0 2723536 99.991 113400 1233 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-11 22:06:39] CVMFS is ok
[2025-10-11 22:06:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 22:06:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 22:06:39] Further information can be found at the LHC@home message board.
[2025-10-11 22:06:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 22:06:39] Checking for apptainer binary...
[2025-10-11 22:06:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 22:06:39] Running /usr/bin/apptainer --version
[2025-10-11 22:06:39] apptainer version 1.4.1-1.1
[2025-10-11 22:06:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 22:06:39] atlasA303
[2025-10-11 22:06:39] apptainer works
[2025-10-11 22:06:39] Set ATHENA_PROC_NUMBER=3
[2025-10-11 22:06:39] Set ATHENA_CORE_NUMBER=3
[2025-10-11 22:06:39] Starting ATLAS job with PandaID=6836604398
[2025-10-11 22:06:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 23:32:57]  *** The last 200 lines of the pilot log: ***
[2025-10-11 23:32:57] 2025-10-11 21:32:09,071 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 23:32:57] 2025-10-11 21:32:09,071 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 23:32:57] 2025-10-11 21:32:09,071 | INFO     | aborting loop
[2025-10-11 23:32:57] 2025-10-11 21:32:09,463 | INFO     | all job control threads have been joined
[2025-10-11 23:32:57] 2025-10-11 21:32:09,699 | INFO     | all payload control threads have been joined
[2025-10-11 23:32:57] 2025-10-11 21:32:10,067 | INFO     | all data control threads have been joined
[2025-10-11 23:32:57] 2025-10-11 21:32:10,077 | INFO     | [job] retrieve thread has finished
[2025-10-11 23:32:57] 2025-10-11 21:32:10,077 | INFO     | [job] queue monitor thread has finished
[2025-10-11 23:32:57] 2025-10-11 21:32:10,077 | INFO     | [job] job monitor thread has finished
[2025-10-11 23:32:57] 2025-10-11 21:32:10,199 | INFO     | [data] copytool_in thread has finished
[2025-10-11 23:32:57] 2025-10-11 21:32:10,300 | INFO     | [payload] validate_post thread has finished
[2025-10-11 23:32:57] 2025-10-11 21:32:10,353 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 23:32:57] 2025-10-11 21:32:10,390 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 23:32:57] 2025-10-11 21:32:10,469 | INFO     | [job] control thread has finished
[2025-10-11 23:32:57] 2025-10-11 21:32:10,593 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 23:32:57] 2025-10-11 21:32:10,600 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 23:32:57] 2025-10-11 21:32:10,605 | INFO     | [job] validate thread has finished
[2025-10-11 23:32:57] 2025-10-11 21:32:10,705 | INFO     | [payload] control thread has finished
[2025-10-11 23:32:57] 2025-10-11 21:32:11,073 | INFO     | [data] control thread has finished
[2025-10-11 23:32:57] 2025-10-11 21:32:11,257 | INFO     | [payload] failed_post thread has finished
[2025-10-11 23:32:57] 2025-10-11 21:32:11,278 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 23:32:57] 2025-10-11 21:32:12,359 | INFO     | [data] copytool_out thread has finished
[2025-10-11 23:32:57] 2025-10-11 21:32:13,078 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 23:32:57] 2025-10-11 21:32:39,038 | INFO     | PID=2610380 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 23:32:57] 2025-10-11 21:32:39,038 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 23:32:57] 2025-10-11 21:32:39,038 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 23:32:57] 2025-10-11 21:32:39,038 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 23:32:57] 2025-10-11 21:32:50,447 | INFO     | [monitor] cgroup control has ended
[2025-10-11 23:32:57] 2025-10-11 21:32:52,536 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140651999213376)>', '<ExcThread(monitor, started 140650909525760)>']
[2025-10-11 23:32:57] 2025-10-11 21:32:53,106 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 23:32:57] 2025-10-11 21:32:53,106 | INFO     | [monitor] control thread has ended
[2025-10-11 23:32:57] 2025-10-11 21:32:57,558 | INFO     | all workflow threads have been joined
[2025-10-11 23:32:57] 2025-10-11 21:32:57,559 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 23:32:57] 2025-10-11 21:32:57,559 | INFO     | traces error code: 0
[2025-10-11 23:32:57] 2025-10-11 21:32:57,559 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 23:32:57] 2025-10-11 21:32:57,611 [wrapper] ==== pilot stdout END ====
[2025-10-11 23:32:57] 2025-10-11 21:32:57,614 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 23:32:57] 2025-10-11 21:32:57,616 [wrapper] pilotpid: 2610380
[2025-10-11 23:32:57] 2025-10-11 21:32:57,619 [wrapper] Pilot exit status: 0
[2025-10-11 23:32:57] 2025-10-11 21:32:57,626 [wrapper] pandaids: 6836604398
[2025-10-11 23:32:57] 2025-10-11 21:32:57,645 [wrapper] cleanup supervisor_pilot 2645785 2610381
[2025-10-11 23:32:57] 2025-10-11 21:32:57,647 [wrapper] Test setup, not cleaning
[2025-10-11 23:32:57] 2025-10-11 21:32:57,650 [wrapper] apfmon messages muted
[2025-10-11 23:32:57] 2025-10-11 21:32:57,652 [wrapper] ==== wrapper stdout END ====
[2025-10-11 23:32:57] 2025-10-11 21:32:57,654 [wrapper] ==== wrapper stderr END ====
[2025-10-11 23:32:57]  *** Error codes and diagnostics ***
[2025-10-11 23:32:57]     "exeErrorCode": 0,
[2025-10-11 23:32:57]     "exeErrorDiag": "",
[2025-10-11 23:32:57]     "pilotErrorCode": 0,
[2025-10-11 23:32:57]     "pilotErrorDiag": "",
[2025-10-11 23:32:57]  *** Listing of results directory ***
[2025-10-11 23:32:57] total 412084
[2025-10-11 23:32:57] -rw-r--r-- 1 boinc boinc    557409 Oct  9 00:57 pilot3.tar.gz
[2025-10-11 23:32:57] -rw-r--r-- 1 boinc boinc      5112 Oct  9 01:14 queuedata.json
[2025-10-11 23:32:57] -rwx------ 1 boinc boinc     36292 Oct  9 01:14 runpilot2-wrapper.sh
[2025-10-11 23:32:57] -rw-r--r-- 1 boinc boinc       100 Oct 11 22:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 23:32:57] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 22:06 run_atlas
[2025-10-11 23:32:57] -rw-r--r-- 1 boinc boinc       105 Oct 11 22:06 job.xml
[2025-10-11 23:32:57] -rw-r--r-- 2 boinc boinc 224205175 Oct 11 22:06 EVNT.46676267._000409.pool.root.1
[2025-10-11 23:32:57] -rw-r--r-- 2 boinc boinc    569679 Oct 11 22:06 input.tar.gz
[2025-10-11 23:32:57] -rw-r--r-- 2 boinc boinc     15120 Oct 11 22:06 start_atlas.sh
[2025-10-11 23:32:57] drwxrwx--x 2 boinc boinc      4096 Oct 11 22:06 shared
[2025-10-11 23:32:57] -rw-r--r-- 1 boinc boinc         0 Oct 11 22:06 boinc_setup_complete
[2025-10-11 23:32:57] -rw-r--r-- 1 boinc boinc      6450 Oct 11 22:06 init_data.xml
[2025-10-11 23:32:57] -rw-r--r-- 1 boinc boinc         0 Oct 11 22:06 boinc_lockfile
[2025-10-11 23:32:57] -rw-r--r-- 1 boinc boinc      2548 Oct 11 22:06 pandaJob.out
[2025-10-11 23:32:57] -rw------- 1 boinc boinc    975512 Oct 11 22:06 agis_schedconf.cvmfs.json
[2025-10-11 23:32:57] -rw------- 1 boinc boinc   1560580 Oct 11 22:06 agis_ddmendpoints.agis.ALL.json
[2025-10-11 23:32:57] drwx------ 5 boinc boinc      4096 Oct 11 22:06 pilot3
[2025-10-11 23:32:57] -rw------- 1 boinc boinc 191844414 Oct 11 23:31 HITS.46676269._010142.pool.root.1
[2025-10-11 23:32:57] -rw-r--r-- 1 boinc boinc       529 Oct 11 23:31 boinc_task_state.xml
[2025-10-11 23:32:57] -rw------- 1 boinc boinc      1018 Oct 11 23:31 memory_monitor_summary.json
[2025-10-11 23:32:57] -rw------- 1 boinc boinc    269411 Oct 11 23:32 log.46676269._010142.job.log.tgz.1
[2025-10-11 23:32:57] -rw------- 1 boinc boinc      7756 Oct 11 23:32 heartbeat.json
[2025-10-11 23:32:57] -rw------- 1 boinc boinc        95 Oct 11 23:32 pilot_heartbeat.json
[2025-10-11 23:32:57] -rw-r--r-- 1 boinc boinc      8192 Oct 11 23:32 boinc_mmap_file
[2025-10-11 23:32:57] -rw-r--r-- 1 boinc boinc        27 Oct 11 23:32 wrapper_checkpoint.txt
[2025-10-11 23:32:57] -rw------- 1 boinc boinc      4752 Oct 11 23:32 pilotlog.txt
[2025-10-11 23:32:57] -rw------- 1 boinc boinc    749132 Oct 11 23:32 log.46676269._010142.job.log.1
[2025-10-11 23:32:57] -rw------- 1 boinc boinc       357 Oct 11 23:32 output.list
[2025-10-11 23:32:57] -rw-r--r-- 1 boinc boinc       620 Oct 11 23:32 runtime_log
[2025-10-11 23:32:57] -rw------- 1 boinc boinc   1034240 Oct 11 23:32 result.tar.gz
[2025-10-11 23:32:57] -rw-r--r-- 1 boinc boinc      8792 Oct 11 23:32 runtime_log.err
[2025-10-11 23:32:57] -rw------- 1 boinc boinc       661 Oct 11 23:32 ITOODmSXsQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmeiYNDmNxsuOm.diag
[2025-10-11 23:32:57] -rw-r--r-- 1 boinc boinc      7064 Oct 11 23:32 stderr.txt
[2025-10-11 23:32:57] HITS file was successfully produced:
[2025-10-11 23:32:57] -rw------- 1 boinc boinc 191844414 Oct 11 23:31 shared/HITS.pool.root.1
[2025-10-11 23:32:57]  *** Contents of shared directory: ***
[2025-10-11 23:32:57] total 407900
[2025-10-11 23:32:57] -rw-r--r-- 2 boinc boinc 224205175 Oct 11 22:06 ATLAS.root_0
[2025-10-11 23:32:57] -rw-r--r-- 2 boinc boinc    569679 Oct 11 22:06 input.tar.gz
[2025-10-11 23:32:57] -rw-r--r-- 2 boinc boinc     15120 Oct 11 22:06 start_atlas.sh
[2025-10-11 23:32:57] -rw------- 1 boinc boinc 191844414 Oct 11 23:31 HITS.pool.root.1
[2025-10-11 23:32:57] -rw------- 1 boinc boinc   1034240 Oct 11 23:32 result.tar.gz
23:32:59 (2606639): run_atlas exited; CPU time 14735.743518
23:32:59 (2606639): called boinc_finish(0)

</stderr_txt>
]]>

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