Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:06:56 (3124830): wrapper (7.7.26015): starting
18:06:56 (3124830): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 18:06:56] Arguments: --nthreads 4
[2025-10-12 18:06:56] Threads: 4
[2025-10-12 18:06:56] Checking for CVMFS
[2025-10-12 18:06:56] No cvmfs_config command found, will try listing directly
[2025-10-12 18:06:56] CVMFS is ok
[2025-10-12 18:06:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 18:06:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 18:06:56] Further information can be found at the LHC@home message board.
[2025-10-12 18:06:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 18:06:56] Checking for apptainer binary...
[2025-10-12 18:06:56] which: no apptainer in ((null))
[2025-10-12 18:06:56] apptainer is not installed, using version from CVMFS
[2025-10-12 18:06:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 18:06:56] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2025-10-12 18:06:56] apptainer works
[2025-10-12 18:06:56] Set ATHENA_PROC_NUMBER=4
[2025-10-12 18:06:56] Set ATHENA_CORE_NUMBER=4
[2025-10-12 18:06:56] Starting ATLAS job with PandaID=6838117477
[2025-10-12 18:06:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:56:58]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:56:58] 2025-10-12 19:23:58,218 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6838117477/HITS.46676269._052070.pool.root.1 since it does not exist
[2025-10-12 21:56:58] 2025-10-12 19:23:58,226 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6838117477/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 21:56:58] 2025-10-12 19:23:58,227 | INFO     | extracted standard info from prmon json
[2025-10-12 21:56:58] 2025-10-12 19:23:58,228 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 21:56:58] 2025-10-12 19:23:58,228 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 21:56:58] 2025-10-12 19:23:58,228 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 21:56:58] 2025-10-12 19:23:58,228 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 21:56:58] 2025-10-12 19:23:58,233 | INFO     | fitting pss+swap vs Time
[2025-10-12 21:56:58] 2025-10-12 19:23:58,233 | INFO     | sum of square deviations: 2229146912.0
[2025-10-12 21:56:58] 2025-10-12 19:23:58,234 | INFO     | sum of deviations: 21046831524.999996
[2025-10-12 21:56:58] 2025-10-12 19:23:58,235 | INFO     | mean x: 1760291110.0
[2025-10-12 21:56:58] 2025-10-12 19:23:58,235 | INFO     | mean y: 2326987.2590673575
[2025-10-12 21:56:58] 2025-10-12 19:23:58,235 | INFO     | -- intersect: -16617730770.120916
[2025-10-12 21:56:58] 2025-10-12 19:23:58,235 | INFO     | intersect: -16617730770.120916
[2025-10-12 21:56:58] 2025-10-12 19:23:58,236 | INFO     | chi2: 1.3951441118031203
[2025-10-12 21:56:58] 2025-10-12 19:23:58,236 | INFO     | sum of square deviations: 2060343747.0
[2025-10-12 21:56:58] 2025-10-12 19:23:58,237 | INFO     | sum of deviations: 20218041818.5
[2025-10-12 21:56:58] 2025-10-12 19:23:58,238 | INFO     | mean x: 1760290957.5
[2025-10-12 21:56:58] 2025-10-12 19:23:58,238 | INFO     | mean y: 2326239.25
[2025-10-12 21:56:58] 2025-10-12 19:23:58,238 | INFO     | -- intersect: -17271313775.08417
[2025-10-12 21:56:58] 2025-10-12 19:23:58,238 | INFO     | intersect: -17271313775.08417
[2025-10-12 21:56:58] 2025-10-12 19:23:58,239 | INFO     | chi2: 1.396085781531828
[2025-10-12 21:56:58] 2025-10-12 19:23:58,239 | INFO     | current chi2=1.396085781531828 (change=-0.06749623359630177 %)
[2025-10-12 21:56:58] 2025-10-12 19:23:58,239 | INFO     | right removable region: 187
[2025-10-12 21:56:58] 2025-10-12 19:23:58,239 | INFO     | sum of square deviations: 2060343747.0
[2025-10-12 21:56:58] 2025-10-12 19:23:58,241 | INFO     | sum of deviations: -4683530956.0
[2025-10-12 21:56:58] 2025-10-12 19:23:58,241 | INFO     | mean x: 1760291262.5
[2025-10-12 21:56:58] 2025-10-12 19:23:58,241 | INFO     | mean y: 2349936.0
[2025-10-12 21:56:58] 2025-10-12 19:23:58,241 | INFO     | -- intersect: 4003807766.276839
[2025-10-12 21:56:58] 2025-10-12 19:23:58,241 | INFO     | intersect: 4003807766.276839
[2025-10-12 21:56:58] 2025-10-12 19:23:58,242 | INFO     | chi2: 0.029631221208958513
[2025-10-12 21:56:58] 2025-10-12 19:23:58,242 | INFO     | current chi2=0.029631221208958513 (change=97.87611753092214 %)
[2025-10-12 21:56:58] 2025-10-12 19:23:58,242 | INFO     | sum of square deviations: 1900284932.0
[2025-10-12 21:56:58] 2025-10-12 19:23:58,243 | INFO     | sum of deviations: -3630821747.999999
[2025-10-12 21:56:58] 2025-10-12 19:23:58,244 | INFO     | mean x: 1760291415.0
[2025-10-12 21:56:58] 2025-10-12 19:23:58,244 | INFO     | mean y: 2348915.5409836066
[2025-10-12 21:56:58] 2025-10-12 19:23:58,244 | INFO     | -- intersect: 3365688930.910685
[2025-10-12 21:56:58] 2025-10-12 19:23:58,244 | INFO     | intersect: 3365688930.910685
[2025-10-12 21:56:58] 2025-10-12 19:23:58,245 | INFO     | chi2: 0.026586293398565847
[2025-10-12 21:56:58] 2025-10-12 19:23:58,245 | INFO     | current chi2=0.026586293398565847 (change=10.276079372226757 %)
[2025-10-12 21:56:58] 2025-10-12 19:23:58,245 | INFO     | left removable region: 20
[2025-10-12 21:56:58] 2025-10-12 19:23:58,245 | INFO     | sum of square deviations: 1444149868.0
[2025-10-12 21:56:58] 2025-10-12 19:23:58,246 | INFO     | sum of deviations: 1439219909.0
[2025-10-12 21:56:58] 2025-10-12 19:23:58,246 | INFO     | mean x: 1760291537.0
[2025-10-12 21:56:58] 2025-10-12 19:23:58,247 | INFO     | mean y: 2342905.3532934133
[2025-10-12 21:56:58] 2025-10-12 19:23:58,247 | INFO     | -- intersect: -1751939445.6904905
[2025-10-12 21:56:58] 2025-10-12 19:23:58,247 | INFO     | intersect: -1751939445.6904905
[2025-10-12 21:56:58] 2025-10-12 19:23:58,247 | INFO     | chi2: 0.009330371417446616
[2025-10-12 21:56:58] 2025-10-12 19:23:58,248 | INFO     | -- intersect: -1751939445.6904905
[2025-10-12 21:56:58] 2025-10-12 19:23:58,248 | INFO     | current memory leak: 1.00 B/s (using 167 data points, chi2=0.01)
[2025-10-12 21:56:58] 2025-10-12 19:23:58,248 | INFO     | could have reported an average CPU frequency of 2606 MHz (10 samples)
[2025-10-12 21:56:58] 2025-10-12 19:23:58,248 | INFO     | ..............................
[2025-10-12 21:56:58] 2025-10-12 19:23:58,249 | INFO     | . Timing measurements:
[2025-10-12 21:56:58] 2025-10-12 19:23:58,249 | INFO     | . get job = 0 s
[2025-10-12 21:56:58] 2025-10-12 19:23:58,249 | INFO     | . initial setup = 1 s
[2025-10-12 21:56:58] 2025-10-12 19:23:58,249 | INFO     | . payload setup = 5 s
[2025-10-12 21:56:58] 2025-10-12 19:23:58,249 | INFO     | . stage-in = 0 s
[2025-10-12 21:56:58] 2025-10-12 19:23:58,249 | INFO     | . payload execution = 11776 s
[2025-10-12 21:56:58] 2025-10-12 19:23:58,249 | INFO     | . stage-out = 1 s
[2025-10-12 21:56:58] 2025-10-12 19:23:58,250 | INFO     | . log creation = 0 s
[2025-10-12 21:56:58] 2025-10-12 19:23:58,250 | INFO     | ..............................
[2025-10-12 21:56:58] 2025-10-12 19:23:58,405 | INFO     | 
[2025-10-12 21:56:58] 2025-10-12 19:23:58,405 | INFO     | job summary report
[2025-10-12 21:56:58] 2025-10-12 19:23:58,405 | INFO     | --------------------------------------------------
[2025-10-12 21:56:58] 2025-10-12 19:23:58,405 | INFO     | PanDA job id: 6838117477
[2025-10-12 21:56:58] 2025-10-12 19:23:58,405 | INFO     | task id: 46676269
[2025-10-12 21:56:58] 2025-10-12 19:23:58,406 | INFO     | errors: (none)
[2025-10-12 21:56:58] 2025-10-12 19:23:58,406 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 21:56:58] 2025-10-12 19:23:58,406 | INFO     | pilot state: finished 
[2025-10-12 21:56:58] 2025-10-12 19:23:58,406 | INFO     | transexitcode: 0
[2025-10-12 21:56:58] 2025-10-12 19:23:58,406 | INFO     | exeerrorcode: 0
[2025-10-12 21:56:58] 2025-10-12 19:23:58,406 | INFO     | exeerrordiag: 
[2025-10-12 21:56:58] 2025-10-12 19:23:58,407 | INFO     | exitcode: 0
[2025-10-12 21:56:58] 2025-10-12 19:23:58,407 | INFO     | exitmsg: OK
[2025-10-12 21:56:58] 2025-10-12 19:23:58,407 | INFO     | cpuconsumptiontime: 45660 s
[2025-10-12 21:56:58] 2025-10-12 19:23:58,407 | INFO     | nevents: 400
[2025-10-12 21:56:58] 2025-10-12 19:23:58,407 | INFO     | neventsw: 0
[2025-10-12 21:56:58] 2025-10-12 19:23:58,408 | INFO     | pid: 3156675
[2025-10-12 21:56:58] 2025-10-12 19:23:58,408 | INFO     | pgrp: 3156675
[2025-10-12 21:56:58] 2025-10-12 19:23:58,408 | INFO     | corecount: 4
[2025-10-12 21:56:58] 2025-10-12 19:23:58,408 | INFO     | event service: False
[2025-10-12 21:56:58] 2025-10-12 19:23:58,408 | INFO     | sizes: {0: 2348817, 4: 2349079, 11: 2349107, 11785: 2378607, 11787: 2387627, 11790: 2387683, 11794: 2388033}
[2025-10-12 21:56:58] 2025-10-12 19:23:58,409 | INFO     | --------------------------------------------------
[2025-10-12 21:56:58] 2025-10-12 19:23:58,409 | INFO     | 
[2025-10-12 21:56:58] 2025-10-12 19:23:58,410 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-10-12 21:56:58] 2025-10-12 19:23:58,428 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 21:56:58] 2025-10-12 19:23:58,429 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 21:56:58] 2025-10-12 19:23:58,429 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 21:56:58] 2025-10-12 19:23:58,429 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 21:56:58] 2025-10-12 19:23:58,429 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 21:56:58] 2025-10-12 19:23:58,430 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 21:56:58] 2025-10-12 19:23:58,430 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 21:56:58] 2025-10-12 19:23:58,430 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 21:56:58] 2025-10-12 19:23:58,430 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 21:56:58] 2025-10-12 19:23:58,430 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 21:56:58] 2025-10-12 19:23:58,430 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 21:56:58] 2025-10-12 19:23:58,430 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 21:56:58] 2025-10-12 19:23:58,431 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 21:56:58] 2025-10-12 19:23:58,431 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 21:56:58] 2025-10-12 19:23:58,431 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 21:56:58] 2025-10-12 19:23:58,431 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 21:56:58] 2025-10-12 19:23:58,431 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 21:56:58] 2025-10-12 19:23:58,431 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 21:56:58] 2025-10-12 19:23:58,432 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 21:56:58] 2025-10-12 19:23:58,432 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 21:56:58] 2025-10-12 19:23:58,432 | INFO     | job 6838117477 has completed (purged errors)
[2025-10-12 21:56:58] 2025-10-12 19:23:58,432 | INFO     | overall cleanup function is called
[2025-10-12 21:56:58] 2025-10-12 19:23:58,677 | INFO     | number of running child processes to parent process 3156675: 1
[2025-10-12 21:56:58] 2025-10-12 19:23:58,677 | INFO     | maximum number of monitored processes: 6
[2025-10-12 21:56:58] 2025-10-12 19:23:58,677 | INFO     | aborting job monitoring since job object (job id=6838117477) has expired
[2025-10-12 21:56:58] 2025-10-12 19:23:59,441 | INFO     | --- collectZombieJob: --- 10, [3156675]
[2025-10-12 21:56:58] 2025-10-12 19:23:59,441 | INFO     | zombie collector waiting for pid 3156675
[2025-10-12 21:56:58] 2025-10-12 19:23:59,442 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 21:56:58] 2025-10-12 19:23:59,442 | INFO     | collected zombie processes
[2025-10-12 21:56:58] 2025-10-12 19:23:59,442 | INFO     | will attempt to kill all subprocesses of pid=3156675
[2025-10-12 21:56:58] 2025-10-12 19:23:59,755 | INFO     | process IDs to be killed: [3156675] (in reverse order)
[2025-10-12 21:56:58] 2025-10-12 19:23:59,833 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 21:56:58] 2025-10-12 19:23:59,834 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 21:56:58] 2025-10-12 19:23:59,842 | INFO     | did not find any defunct processes belonging to 3156675
[2025-10-12 21:56:58] 2025-10-12 19:23:59,849 | INFO     | did not find any defunct processes belonging to 3156675
[2025-10-12 21:56:58] 2025-10-12 19:23:59,850 | INFO     | ready for new job
[2025-10-12 21:56:58] 2025-10-12 19:23:59,850 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 21:56:58] 2025-10-12 19:23:59,852 | INFO     | ***************************************
[2025-10-12 21:56:58] 2025-10-12 19:23:59,852 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 21:56:58] 2025-10-12 19:23:59,852 | INFO     | ***************************************
[2025-10-12 21:56:58] 2025-10-12 19:23:59,852 | INFO     | 
[2025-10-12 21:56:58] 2025-10-12 19:23:59,855 | INFO     | architecture information:
[2025-10-12 21:56:58] 2025-10-12 19:23:59,855 | INFO     | executing command: cat /etc/os-release
[2025-10-12 21:56:58] 2025-10-12 19:23:59,870 | INFO     | cat /etc/os-release:
[2025-10-12 21:56:58] NAME="CentOS Linux"
[2025-10-12 21:56:58] VERSION="7 (Core)"
[2025-10-12 21:56:58] ID="centos"
[2025-10-12 21:56:58] ID_LIKE="rhel fedora"
[2025-10-12 21:56:58] VERSION_ID="7"
[2025-10-12 21:56:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 21:56:58] ANSI_COLOR="0;31"
[2025-10-12 21:56:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 21:56:58] HOME_URL="https://www.centos.org/"
[2025-10-12 21:56:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 21:56:58] 
[2025-10-12 21:56:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 21:56:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 21:56:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 21:56:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 21:56:58] 
[2025-10-12 21:56:58] 2025-10-12 19:23:59,870 | INFO     | ***************************************
[2025-10-12 21:56:58] 2025-10-12 19:24:00,373 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-10-12 21:56:58] 2025-10-12 19:24:00,388 | INFO     | sufficient remaining disk space (1677607305216 B)
[2025-10-12 21:56:58] 2025-10-12 19:24:00,388 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 21:56:58] 2025-10-12 19:24:00,389 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 21:56:58] 2025-10-12 19:24:00,389 | INFO     | update_server=False
[2025-10-12 21:56:58] 2025-10-12 19:24:00,389 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 21:56:58] 2025-10-12 19:24:00,389 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:56:58] 2025-10-12 19:24:00,390 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 21:56:58] 2025-10-12 19:24:00,390 | INFO     | aborting loop
[2025-10-12 21:56:58] 2025-10-12 19:24:00,611 | INFO     | all payload control threads have been joined
[2025-10-12 21:56:58] 2025-10-12 19:24:00,767 | INFO     | all data control threads have been joined
[2025-10-12 21:56:58] 2025-10-12 19:24:01,391 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:56:58] 2025-10-12 19:24:01,394 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:56:58] 2025-10-12 19:24:01,402 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:56:58] 2025-10-12 19:24:01,492 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:56:58] 2025-10-12 19:24:01,518 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:56:58] 2025-10-12 19:24:01,530 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:56:58] 2025-10-12 19:24:01,617 | INFO     | [payload] control thread has finished
[2025-10-12 21:56:58] 2025-10-12 19:24:01,772 | INFO     | [data] control thread has finished
[2025-10-12 21:56:58] 2025-10-12 19:24:01,817 | INFO     | all job control threads have been joined
[2025-10-12 21:56:58] 2025-10-12 19:24:02,206 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:56:58] 2025-10-12 19:24:02,251 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:56:58] 2025-10-12 19:24:02,321 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:56:58] 2025-10-12 19:24:02,557 | INFO     | [job] validate thread has finished
[2025-10-12 21:56:58] 2025-10-12 19:24:02,822 | INFO     | [job] control thread has finished
[2025-10-12 21:56:58] 2025-10-12 19:24:03,371 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:56:58] 2025-10-12 19:24:03,536 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:56:58] 2025-10-12 19:24:04,377 | INFO     | [job] queue monitor thread has finished
[2025-10-12 21:56:58] 2025-10-12 19:24:04,392 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:56:58] 2025-10-12 19:24:10,776 | INFO     | job.realtimelogging is not enabled
[2025-10-12 21:56:58] 2025-10-12 19:24:11,781 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:56:58] 2025-10-12 19:24:26,758 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:56:58] 2025-10-12 19:24:27,550 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22747869275968)>', '<ExcThread(monitor, started 22747629451008)>']
[2025-10-12 21:56:58] 2025-10-12 19:24:31,460 | INFO     | PID=3136358 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 21:56:58] 2025-10-12 19:24:31,460 | INFO     | .. there are 2 such processes running
[2025-10-12 21:56:58] 2025-10-12 19:24:31,461 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:56:58] 2025-10-12 19:24:31,461 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:56:58] 2025-10-12 19:24:31,461 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:56:58] 2025-10-12 19:24:31,462 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:56:58] 2025-10-12 19:24:31,462 | INFO     | [monitor] control thread has ended
[2025-10-12 21:56:58] 2025-10-12 19:24:32,576 | INFO     | all workflow threads have been joined
[2025-10-12 21:56:58] 2025-10-12 19:24:32,576 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:56:58] 2025-10-12 19:24:32,576 | INFO     | traces error code: 0
[2025-10-12 21:56:58] 2025-10-12 19:24:32,577 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:56:58] 2025-10-12 19:24:32,709 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:56:58] 2025-10-12 19:24:32,712 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:56:58] 2025-10-12 19:24:32,714 [wrapper] pilotpid: 3136358
[2025-10-12 21:56:58] 2025-10-12 19:24:32,716 [wrapper] Pilot exit status: 0
[2025-10-12 21:56:58] 2025-10-12 19:24:32,725 [wrapper] pandaids: 6838117477
[2025-10-12 21:56:58] 2025-10-12 19:24:32,777 [wrapper] cleanup supervisor_pilot 3290180 3136361
[2025-10-12 21:56:58] 2025-10-12 19:24:32,780 [wrapper] Test setup, not cleaning
[2025-10-12 21:56:58] 2025-10-12 19:24:32,782 [wrapper] apfmon messages muted
[2025-10-12 21:56:58] 2025-10-12 19:24:32,785 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:56:58] 2025-10-12 19:24:32,787 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:56:58]  *** Error codes and diagnostics ***
[2025-10-12 21:56:58]     "exeErrorCode": 0,
[2025-10-12 21:56:58]     "exeErrorDiag": "",
[2025-10-12 21:56:58]     "pilotErrorCode": 0,
[2025-10-12 21:56:58]     "pilotErrorDiag": "",
[2025-10-12 21:56:58]  *** Listing of results directory ***
[2025-10-12 21:56:58] total 410116
[2025-10-12 21:56:58] -rw-r--r-- 1 boinc boinc      5112 Oct 11 07:36 queuedata.json
[2025-10-12 21:56:58] -rw-r--r-- 1 boinc boinc    557409 Oct 11 07:36 pilot3.tar.gz
[2025-10-12 21:56:58] -rwx------ 1 boinc boinc     36292 Oct 11 07:37 runpilot2-wrapper.sh
[2025-10-12 21:56:58] -rw-r--r-- 1 boinc boinc       100 Oct 12 18:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:56:58] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 18:06 run_atlas
[2025-10-12 21:56:58] -rw-r--r-- 1 boinc boinc       105 Oct 12 18:06 job.xml
[2025-10-12 21:56:58] -rw-r--r-- 2 boinc boinc 220819567 Oct 12 18:06 EVNT.46676267._002093.pool.root.1
[2025-10-12 21:56:58] -rw-r--r-- 1 boinc boinc      6421 Oct 12 18:06 init_data.xml
[2025-10-12 21:56:58] -rw-r--r-- 2 boinc boinc     15120 Oct 12 18:06 start_atlas.sh
[2025-10-12 21:56:58] drwxrwx--x 2 boinc boinc      4096 Oct 12 18:06 shared
[2025-10-12 21:56:58] -rw-r--r-- 2 boinc boinc    569675 Oct 12 18:06 input.tar.gz
[2025-10-12 21:56:58] -rw-r--r-- 1 boinc boinc         0 Oct 12 18:06 boinc_lockfile
[2025-10-12 21:56:58] -rw-r--r-- 1 boinc boinc      2549 Oct 12 18:06 pandaJob.out
[2025-10-12 21:56:58] -rw------- 1 boinc boinc    975528 Oct 12 18:07 agis_schedconf.cvmfs.json
[2025-10-12 21:56:58] drwx------ 5 boinc boinc      4096 Oct 12 18:07 pilot3
[2025-10-12 21:56:58] -rw------- 1 boinc boinc 191127771 Oct 12 21:23 HITS.46676269._052070.pool.root.1
[2025-10-12 21:56:58] -rw-r--r-- 1 boinc boinc       527 Oct 12 21:23 boinc_task_state.xml
[2025-10-12 21:56:58] -rw------- 1 boinc boinc      1029 Oct 12 21:23 memory_monitor_summary.json
[2025-10-12 21:56:58] -rw------- 1 boinc boinc   1560580 Oct 12 21:23 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:56:58] -rw------- 1 boinc boinc    360985 Oct 12 21:23 log.46676269._052070.job.log.tgz.1
[2025-10-12 21:56:58] -rw------- 1 boinc boinc      7823 Oct 12 21:23 heartbeat.json
[2025-10-12 21:56:58] -rw------- 1 boinc boinc        95 Oct 12 21:24 pilot_heartbeat.json
[2025-10-12 21:56:58] -rw------- 1 boinc boinc      4906 Oct 12 21:24 pilotlog.txt
[2025-10-12 21:56:58] -rw------- 1 boinc boinc   1688597 Oct 12 21:24 log.46676269._052070.job.log.1
[2025-10-12 21:56:58] -rw------- 1 boinc boinc       357 Oct 12 21:24 output.list
[2025-10-12 21:56:58] -rw-r--r-- 1 boinc boinc       620 Oct 12 21:24 runtime_log
[2025-10-12 21:56:58] -rw------- 1 boinc boinc   2068480 Oct 12 21:24 result.tar.gz
[2025-10-12 21:56:58] -rw------- 1 boinc boinc       665 Oct 12 21:24 yUdNDm2ShR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmuWfNDmkmgoyn.diag
[2025-10-12 21:56:58] -rw-r--r-- 1 boinc boinc      9070 Oct 12 21:24 runtime_log.err
[2025-10-12 21:56:58] -rw-r--r-- 1 boinc boinc        26 Oct 12 21:56 wrapper_checkpoint.txt
[2025-10-12 21:56:58] -rw-r--r-- 1 boinc boinc      8192 Oct 12 21:56 boinc_mmap_file
[2025-10-12 21:56:58] -rw-r--r-- 1 boinc boinc     20961 Oct 12 21:56 stderr.txt
[2025-10-12 21:56:58] HITS file was successfully produced:
[2025-10-12 21:56:58] -rw------- 1 boinc boinc 191127771 Oct 12 21:23 shared/HITS.pool.root.1
[2025-10-12 21:56:58]  *** Contents of shared directory: ***
[2025-10-12 21:56:58] total 404904
[2025-10-12 21:56:58] -rw-r--r-- 2 boinc boinc 220819567 Oct 12 18:06 ATLAS.root_0
[2025-10-12 21:56:58] -rw-r--r-- 2 boinc boinc     15120 Oct 12 18:06 start_atlas.sh
[2025-10-12 21:56:58] -rw-r--r-- 2 boinc boinc    569675 Oct 12 18:06 input.tar.gz
[2025-10-12 21:56:58] -rw------- 1 boinc boinc 191127771 Oct 12 21:23 HITS.pool.root.1
[2025-10-12 21:56:58] -rw------- 1 boinc boinc   2068480 Oct 12 21:24 result.tar.gz
21:57:00 (3124830): run_atlas exited; CPU time 46027.382384
21:57:00 (3124830): called boinc_finish(0)

</stderr_txt>
]]>

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