Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:54:50 (406093): wrapper (7.7.26015): starting
10:54:50 (406093): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 10:54:50] Arguments: --nthreads 8
[2025-10-11 10:54:50] Threads: 8
[2025-10-11 10:54:50] Checking for CVMFS
[2025-10-11 10:54:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 10:54:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 10:54:52] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 10:54:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 10:54:53] 2.13.2.0 842134 127951 272844 151587 1 463 19964643 32935937 15986 16776704 0 167008393 99.553 195030571 30503 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 10:54:53] CVMFS is ok
[2025-10-11 10:54:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 10:54:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 10:54:53] Further information can be found at the LHC@home message board.
[2025-10-11 10:54:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 10:54:53] Checking for apptainer binary...
[2025-10-11 10:54:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 10:54:53] Running /usr/bin/apptainer --version
[2025-10-11 10:54:53] apptainer version 1.4.3-1.el9
[2025-10-11 10:54:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 10:54:54] c6-5-37-2.aglt2.org
[2025-10-11 10:54:54] apptainer works
[2025-10-11 10:54:54] Set ATHENA_PROC_NUMBER=8
[2025-10-11 10:54:54] Set ATHENA_CORE_NUMBER=8
[2025-10-11 10:54:54] Starting ATLAS job with PandaID=6838117496
[2025-10-11 10:54:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 15:28:55]  *** The last 200 lines of the pilot log: ***
[2025-10-11 15:28:55] 2025-10-11 19:27:51,680 | INFO     | intersect: -29636527062.305706
[2025-10-11 15:28:55] 2025-10-11 19:27:51,680 | INFO     | chi2: 2.634917186819244
[2025-10-11 15:28:55] 2025-10-11 19:27:51,680 | INFO     | current chi2=2.634917186819244 (change=0.32156257056051407 %)
[2025-10-11 15:28:55] 2025-10-11 19:27:51,680 | INFO     | right removable region: 258
[2025-10-11 15:28:55] 2025-10-11 19:27:51,680 | INFO     | sum of square deviations: 5387083797.567586
[2025-10-11 15:28:55] 2025-10-11 19:27:51,682 | INFO     | sum of deviations: 30595490236.81078
[2025-10-11 15:28:55] 2025-10-11 19:27:51,682 | INFO     | mean x: 1760202923.4324324
[2025-10-11 15:28:55] 2025-10-11 19:27:51,682 | INFO     | mean y: 2278777.7606177605
[2025-10-11 15:28:55] 2025-10-11 19:27:51,682 | INFO     | -- intersect: -9994645974.551466
[2025-10-11 15:28:55] 2025-10-11 19:27:51,682 | INFO     | intersect: -9994645974.551466
[2025-10-11 15:28:55] 2025-10-11 19:27:51,682 | INFO     | chi2: 0.22597768761047968
[2025-10-11 15:28:55] 2025-10-11 19:27:51,682 | INFO     | current chi2=0.22597768761047968 (change=91.4513052221873 %)
[2025-10-11 15:28:55] 2025-10-11 19:27:51,683 | INFO     | sum of square deviations: 5081040848.992171
[2025-10-11 15:28:55] 2025-10-11 19:27:51,684 | INFO     | sum of deviations: 18905377238.795288
[2025-10-11 15:28:55] 2025-10-11 19:27:51,685 | INFO     | mean x: 1760203075.937008
[2025-10-11 15:28:55] 2025-10-11 19:27:51,685 | INFO     | mean y: 2284583.3622047245
[2025-10-11 15:28:55] 2025-10-11 19:27:51,685 | INFO     | -- intersect: -6547023748.626023
[2025-10-11 15:28:55] 2025-10-11 19:27:51,685 | INFO     | intersect: -6547023748.626023
[2025-10-11 15:28:55] 2025-10-11 19:27:51,685 | INFO     | chi2: 0.14634490271096873
[2025-10-11 15:28:55] 2025-10-11 19:27:51,685 | INFO     | current chi2=0.14634490271096873 (change=35.239224607331536 %)
[2025-10-11 15:28:55] 2025-10-11 19:27:51,685 | INFO     | sum of square deviations: 4786858801.020096
[2025-10-11 15:28:55] 2025-10-11 19:27:51,687 | INFO     | sum of deviations: 25888759514.56224
[2025-10-11 15:28:55] 2025-10-11 19:27:51,687 | INFO     | mean x: 1760203228.429719
[2025-10-11 15:28:55] 2025-10-11 19:27:51,687 | INFO     | mean y: 2280938.0321285143
[2025-10-11 15:28:55] 2025-10-11 19:27:51,687 | INFO     | -- intersect: -9517422895.275436
[2025-10-11 15:28:55] 2025-10-11 19:27:51,687 | INFO     | intersect: -9517422895.275436
[2025-10-11 15:28:55] 2025-10-11 19:27:51,687 | INFO     | chi2: 0.08197105622215331
[2025-10-11 15:28:55] 2025-10-11 19:27:51,687 | INFO     | current chi2=0.08197105622215331 (change=43.98776130655798 %)
[2025-10-11 15:28:55] 2025-10-11 19:27:51,688 | INFO     | sum of square deviations: 4504243298.672141
[2025-10-11 15:28:55] 2025-10-11 19:27:51,689 | INFO     | sum of deviations: 27873570970.01643
[2025-10-11 15:28:55] 2025-10-11 19:27:51,689 | INFO     | mean x: 1760203380.9262295
[2025-10-11 15:28:55] 2025-10-11 19:27:51,689 | INFO     | mean y: 2279906.2786885244
[2025-10-11 15:28:55] 2025-10-11 19:27:51,689 | INFO     | -- intersect: -10890371890.38914
[2025-10-11 15:28:55] 2025-10-11 19:27:51,689 | INFO     | intersect: -10890371890.38914
[2025-10-11 15:28:55] 2025-10-11 19:27:51,690 | INFO     | chi2: 0.030578543282543964
[2025-10-11 15:28:55] 2025-10-11 19:27:51,690 | INFO     | current chi2=0.030578543282543964 (change=62.69592623075183 %)
[2025-10-11 15:28:55] 2025-10-11 19:27:51,690 | INFO     | sum of square deviations: 4232961474.468621
[2025-10-11 15:28:55] 2025-10-11 19:27:51,692 | INFO     | sum of deviations: 25646501834.623425
[2025-10-11 15:28:55] 2025-10-11 19:27:51,692 | INFO     | mean x: 1760203533.4267783
[2025-10-11 15:28:55] 2025-10-11 19:27:51,692 | INFO     | mean y: 2281157.1213389123
[2025-10-11 15:28:55] 2025-10-11 19:27:51,692 | INFO     | -- intersect: -10662371337.739243
[2025-10-11 15:28:55] 2025-10-11 19:27:51,692 | INFO     | intersect: -10662371337.739243
[2025-10-11 15:28:55] 2025-10-11 19:27:51,692 | INFO     | chi2: 0.030079842934319468
[2025-10-11 15:28:55] 2025-10-11 19:27:51,693 | INFO     | current chi2=0.030079842934319468 (change=1.630883275297104 %)
[2025-10-11 15:28:55] 2025-10-11 19:27:51,693 | INFO     | left removable region: 50
[2025-10-11 15:28:55] 2025-10-11 19:27:51,693 | INFO     | sum of square deviations: 2790220271.918272
[2025-10-11 15:28:55] 2025-10-11 19:27:51,694 | INFO     | sum of deviations: 19167591171.120193
[2025-10-11 15:28:55] 2025-10-11 19:27:51,694 | INFO     | mean x: 1760204112.9278846
[2025-10-11 15:28:55] 2025-10-11 19:27:51,694 | INFO     | mean y: 2286806.341346154
[2025-10-11 15:28:55] 2025-10-11 19:27:51,694 | INFO     | -- intersect: -12089544492.386387
[2025-10-11 15:28:55] 2025-10-11 19:27:51,695 | INFO     | intersect: -12089544492.386387
[2025-10-11 15:28:55] 2025-10-11 19:27:51,695 | INFO     | chi2: 0.01960403842532817
[2025-10-11 15:28:55] 2025-10-11 19:27:51,695 | INFO     | -- intersect: -12089544492.386387
[2025-10-11 15:28:55] 2025-10-11 19:27:51,695 | INFO     | current memory leak: 6.87 B/s (using 208 data points, chi2=0.02)
[2025-10-11 15:28:55] 2025-10-11 19:27:51,695 | INFO     | could have reported an average CPU frequency of 2615 MHz (12 samples)
[2025-10-11 15:28:55] 2025-10-11 19:27:51,696 | INFO     | ..............................
[2025-10-11 15:28:55] 2025-10-11 19:27:51,696 | INFO     | . Timing measurements:
[2025-10-11 15:28:55] 2025-10-11 19:27:51,696 | INFO     | . get job = 0 s
[2025-10-11 15:28:55] 2025-10-11 19:27:51,696 | INFO     | . initial setup = 8 s
[2025-10-11 15:28:55] 2025-10-11 19:27:51,696 | INFO     | . payload setup = 56 s
[2025-10-11 15:28:55] 2025-10-11 19:27:51,696 | INFO     | . stage-in = 1 s
[2025-10-11 15:28:55] 2025-10-11 19:27:51,696 | INFO     | . payload execution = 16133 s
[2025-10-11 15:28:55] 2025-10-11 19:27:51,696 | INFO     | . stage-out = 4 s
[2025-10-11 15:28:55] 2025-10-11 19:27:51,696 | INFO     | . log creation = 0 s
[2025-10-11 15:28:55] 2025-10-11 19:27:51,696 | INFO     | ..............................
[2025-10-11 15:28:55] 2025-10-11 19:27:51,958 | INFO     | 
[2025-10-11 15:28:55] 2025-10-11 19:27:51,958 | INFO     | job summary report
[2025-10-11 15:28:55] 2025-10-11 19:27:51,958 | INFO     | --------------------------------------------------
[2025-10-11 15:28:55] 2025-10-11 19:27:51,958 | INFO     | PanDA job id: 6838117496
[2025-10-11 15:28:55] 2025-10-11 19:27:51,959 | INFO     | task id: 46676269
[2025-10-11 15:28:55] 2025-10-11 19:27:51,959 | INFO     | errors: (none)
[2025-10-11 15:28:55] 2025-10-11 19:27:51,959 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 15:28:55] 2025-10-11 19:27:51,959 | INFO     | pilot state: finished 
[2025-10-11 15:28:55] 2025-10-11 19:27:51,959 | INFO     | transexitcode: 0
[2025-10-11 15:28:55] 2025-10-11 19:27:51,959 | INFO     | exeerrorcode: 0
[2025-10-11 15:28:55] 2025-10-11 19:27:51,959 | INFO     | exeerrordiag: 
[2025-10-11 15:28:55] 2025-10-11 19:27:51,959 | INFO     | exitcode: 0
[2025-10-11 15:28:55] 2025-10-11 19:27:51,959 | INFO     | exitmsg: OK
[2025-10-11 15:28:55] 2025-10-11 19:27:51,959 | INFO     | cpuconsumptiontime: 45925 s
[2025-10-11 15:28:55] 2025-10-11 19:27:51,959 | INFO     | nevents: 400
[2025-10-11 15:28:55] 2025-10-11 19:27:51,960 | INFO     | neventsw: 0
[2025-10-11 15:28:55] 2025-10-11 19:27:51,960 | INFO     | pid: 421725
[2025-10-11 15:28:55] 2025-10-11 19:27:51,960 | INFO     | pgrp: 421725
[2025-10-11 15:28:55] 2025-10-11 19:27:51,960 | INFO     | corecount: 8
[2025-10-11 15:28:55] 2025-10-11 19:27:51,960 | INFO     | event service: False
[2025-10-11 15:28:55] 2025-10-11 19:27:51,960 | INFO     | sizes: {0: 2348029, 1: 2348714, 2: 2348742, 3: 2348941, 14: 2348941, 26: 2348969, 37: 2349125, 43: 2349415, 48: 2349443, 16194: 2380593, 16200: 2389591, 16201: 238
[2025-10-11 15:28:55] 2025-10-11 19:27:51,960 | INFO     | --------------------------------------------------
[2025-10-11 15:28:55] 2025-10-11 19:27:51,960 | INFO     | 
[2025-10-11 15:28:55] 2025-10-11 19:27:51,960 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 15:28:55] 2025-10-11 19:27:52,084 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 15:28:55] 2025-10-11 19:27:52,084 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 15:28:55] 2025-10-11 19:27:52,084 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 15:28:55] 2025-10-11 19:27:52,084 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 15:28:55] 2025-10-11 19:27:52,084 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 15:28:55] 2025-10-11 19:27:52,084 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 15:28:55] 2025-10-11 19:27:52,085 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 15:28:55] 2025-10-11 19:27:52,085 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 15:28:55] 2025-10-11 19:27:52,085 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 15:28:55] 2025-10-11 19:27:52,085 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 15:28:55] 2025-10-11 19:27:52,085 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 15:28:55] 2025-10-11 19:27:52,085 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 15:28:55] 2025-10-11 19:27:52,085 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 15:28:55] 2025-10-11 19:27:52,085 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 15:28:55] 2025-10-11 19:27:52,085 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 15:28:55] 2025-10-11 19:27:52,085 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 15:28:55] 2025-10-11 19:27:52,085 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 15:28:55] 2025-10-11 19:27:52,086 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 15:28:55] 2025-10-11 19:27:52,086 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 15:28:55] 2025-10-11 19:27:52,086 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 15:28:55] 2025-10-11 19:27:52,086 | INFO     | job 6838117496 has completed (purged errors)
[2025-10-11 15:28:55] 2025-10-11 19:27:52,086 | INFO     | overall cleanup function is called
[2025-10-11 15:28:55] 2025-10-11 19:27:53,112 | INFO     | --- collectZombieJob: --- 10, [421725]
[2025-10-11 15:28:55] 2025-10-11 19:27:53,114 | INFO     | zombie collector waiting for pid 421725
[2025-10-11 15:28:55] 2025-10-11 19:27:53,114 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 15:28:55] 2025-10-11 19:27:53,114 | INFO     | collected zombie processes
[2025-10-11 15:28:55] 2025-10-11 19:27:53,114 | INFO     | will attempt to kill all subprocesses of pid=421725
[2025-10-11 15:28:55] 2025-10-11 19:27:54,192 | INFO     | process IDs to be killed: [421725] (in reverse order)
[2025-10-11 15:28:55] 2025-10-11 19:27:54,428 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 15:28:55] 2025-10-11 19:27:54,429 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 15:28:55] 2025-10-11 19:27:54,517 | INFO     | did not find any defunct processes belonging to 421725
[2025-10-11 15:28:55] 2025-10-11 19:27:54,546 | INFO     | did not find any defunct processes belonging to 421725
[2025-10-11 15:28:55] 2025-10-11 19:27:54,547 | INFO     | ready for new job
[2025-10-11 15:28:55] 2025-10-11 19:27:54,547 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 15:28:55] 2025-10-11 19:27:54,555 | INFO     | ***************************************
[2025-10-11 15:28:55] 2025-10-11 19:27:54,555 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 15:28:55] 2025-10-11 19:27:54,555 | INFO     | ***************************************
[2025-10-11 15:28:55] 2025-10-11 19:27:54,555 | INFO     | 
[2025-10-11 15:28:55] 2025-10-11 19:27:54,571 | INFO     | architecture information:
[2025-10-11 15:28:55] 2025-10-11 19:27:54,572 | INFO     | executing command: cat /etc/os-release
[2025-10-11 15:28:55] 2025-10-11 19:27:54,629 | INFO     | cat /etc/os-release:
[2025-10-11 15:28:55] NAME="CentOS Linux"
[2025-10-11 15:28:55] VERSION="7 (Core)"
[2025-10-11 15:28:55] ID="centos"
[2025-10-11 15:28:55] ID_LIKE="rhel fedora"
[2025-10-11 15:28:55] VERSION_ID="7"
[2025-10-11 15:28:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 15:28:55] ANSI_COLOR="0;31"
[2025-10-11 15:28:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 15:28:55] HOME_URL="https://www.centos.org/"
[2025-10-11 15:28:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 15:28:55] 
[2025-10-11 15:28:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 15:28:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 15:28:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 15:28:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 15:28:55] 
[2025-10-11 15:28:55] 2025-10-11 19:27:54,630 | INFO     | ***************************************
[2025-10-11 15:28:55] 2025-10-11 19:27:55,133 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 15:28:55] 2025-10-11 19:27:55,178 | INFO     | sufficient remaining disk space (75162976256 B)
[2025-10-11 15:28:55] 2025-10-11 19:27:55,179 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 15:28:55] 2025-10-11 19:27:55,179 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 15:28:55] 2025-10-11 19:27:55,179 | INFO     | update_server=False
[2025-10-11 15:28:55] 2025-10-11 19:27:55,179 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 15:28:55] 2025-10-11 19:27:55,179 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 15:28:55] 2025-10-11 19:27:55,180 | INFO     | aborting loop
[2025-10-11 15:28:55] 2025-10-11 19:27:55,445 | INFO     | all job control threads have been joined
[2025-10-11 15:28:55] 2025-10-11 19:27:55,603 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 15:28:55] 2025-10-11 19:27:55,842 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 15:28:55] 2025-10-11 19:27:55,855 | INFO     | all payload control threads have been joined
[2025-10-11 15:28:55] 2025-10-11 19:27:55,938 | INFO     | all data control threads have been joined
[2025-10-11 15:28:55] 2025-10-11 19:27:56,184 | INFO     | [job] retrieve thread has finished
[2025-10-11 15:28:55] 2025-10-11 19:27:56,185 | INFO     | [job] job monitor thread has finished
[2025-10-11 15:28:55] 2025-10-11 19:27:56,451 | INFO     | [job] control thread has finished
[2025-10-11 15:28:55] 2025-10-11 19:27:56,532 | INFO     | [payload] failed_post thread has finished
[2025-10-11 15:28:55] 2025-10-11 19:27:56,861 | INFO     | [payload] control thread has finished
[2025-10-11 15:28:55] 2025-10-11 19:27:56,957 | INFO     | [data] control thread has finished
[2025-10-11 15:28:55] 2025-10-11 19:27:56,972 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 15:28:55] 2025-10-11 19:27:57,024 | INFO     | [job] validate thread has finished
[2025-10-11 15:28:55] 2025-10-11 19:27:57,075 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 15:28:55] 2025-10-11 19:27:57,115 | INFO     | [data] copytool_in thread has finished
[2025-10-11 15:28:55] 2025-10-11 19:27:57,133 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 15:28:55] 2025-10-11 19:27:57,179 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 15:28:55] 2025-10-11 19:27:57,359 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 15:28:55] 2025-10-11 19:27:57,691 | INFO     | [payload] validate_post thread has finished
[2025-10-11 15:28:55] 2025-10-11 19:27:57,849 | INFO     | [data] copytool_out thread has finished
[2025-10-11 15:28:55] 2025-10-11 19:27:57,978 | INFO     | [job] queue monitor thread has finished
[2025-10-11 15:28:55] 2025-10-11 19:27:59,620 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 15:28:55] 2025-10-11 19:28:24,761 | INFO     | PID=411092 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 15:28:55] 2025-10-11 19:28:24,761 | INFO     | .. there are 16 such processes running
[2025-10-11 15:28:55] 2025-10-11 19:28:24,761 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 15:28:55] 2025-10-11 19:28:24,761 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 15:28:55] 2025-10-11 19:28:24,761 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 15:28:55] 2025-10-11 19:28:45,130 | INFO     | [monitor] cgroup control has ended
[2025-10-11 15:28:55] 2025-10-11 19:28:47,069 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140052093572928)>', '<ExcThread(monitor, started 140051207931648)>']
[2025-10-11 15:28:55] 2025-10-11 19:28:47,946 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 15:28:55] 2025-10-11 19:28:47,946 | INFO     | [monitor] control thread has ended
[2025-10-11 15:28:55] 2025-10-11 19:28:52,095 | INFO     | all workflow threads have been joined
[2025-10-11 15:28:55] 2025-10-11 19:28:52,095 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 15:28:55] 2025-10-11 19:28:52,096 | INFO     | traces error code: 0
[2025-10-11 15:28:55] 2025-10-11 19:28:52,096 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 15:28:55] 2025-10-11 19:28:54,249 [wrapper] ==== pilot stdout END ====
[2025-10-11 15:28:55] 2025-10-11 19:28:54,299 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 15:28:55] 2025-10-11 19:28:54,306 [wrapper] pilotpid: 411092
[2025-10-11 15:28:55] 2025-10-11 19:28:54,311 [wrapper] Pilot exit status: 0
[2025-10-11 15:28:55] 2025-10-11 19:28:54,490 [wrapper] pandaids: 6838117496
[2025-10-11 15:28:55] 2025-10-11 19:28:55,150 [wrapper] cleanup supervisor_pilot  988600 411093
[2025-10-11 15:28:55] 2025-10-11 19:28:55,154 [wrapper] Test setup, not cleaning
[2025-10-11 15:28:55] 2025-10-11 19:28:55,157 [wrapper] apfmon messages muted
[2025-10-11 15:28:55] 2025-10-11 19:28:55,160 [wrapper] ==== wrapper stdout END ====
[2025-10-11 15:28:55] 2025-10-11 19:28:55,183 [wrapper] ==== wrapper stderr END ====
[2025-10-11 15:28:55]  *** Error codes and diagnostics ***
[2025-10-11 15:28:55]     "exeErrorCode": 0,
[2025-10-11 15:28:55]     "exeErrorDiag": "",
[2025-10-11 15:28:55]     "pilotErrorCode": 0,
[2025-10-11 15:28:55]     "pilotErrorDiag": "",
[2025-10-11 15:28:55]  *** Listing of results directory ***
[2025-10-11 15:28:55] total 420860
[2025-10-11 15:28:55] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 01:36 queuedata.json
[2025-10-11 15:28:55] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 01:36 pilot3.tar.gz
[2025-10-11 15:28:55] -rwx------. 1 boincer umatlas     36292 Oct 11 01:37 runpilot2-wrapper.sh
[2025-10-11 15:28:55] -rw-r--r--. 1 boincer umatlas       100 Oct 11 10:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 15:28:55] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 10:54 run_atlas
[2025-10-11 15:28:55] -rw-r--r--. 1 boincer umatlas       105 Oct 11 10:54 job.xml
[2025-10-11 15:28:55] -rw-r--r--. 2 boincer umatlas 220819567 Oct 11 10:54 EVNT.46676267._002093.pool.root.1
[2025-10-11 15:28:55] -rw-r--r--. 2 boincer umatlas    569678 Oct 11 10:54 input.tar.gz
[2025-10-11 15:28:55] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 10:54 start_atlas.sh
[2025-10-11 15:28:55] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 10:54 shared
[2025-10-11 15:28:55] -rw-r--r--. 1 boincer umatlas         0 Oct 11 10:54 boinc_lockfile
[2025-10-11 15:28:55] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 10:54 pandaJob.out
[2025-10-11 15:28:55] -rw-------. 1 boincer umatlas    975536 Oct 11 10:56 agis_schedconf.cvmfs.json
[2025-10-11 15:28:55] drwx------. 5 boincer umatlas      4096 Oct 11 10:56 pilot3
[2025-10-11 15:28:55] -rw-r--r--. 1 boincer umatlas      6844 Oct 11 15:20 init_data.xml
[2025-10-11 15:28:55] -rw-------. 1 boincer umatlas 201157672 Oct 11 15:26 HITS.46676269._052089.pool.root.1
[2025-10-11 15:28:55] -rw-r--r--. 1 boincer umatlas       531 Oct 11 15:26 boinc_task_state.xml
[2025-10-11 15:28:55] -rw-------. 1 boincer umatlas      1056 Oct 11 15:27 memory_monitor_summary.json
[2025-10-11 15:28:55] -rw-------. 1 boincer umatlas   1560580 Oct 11 15:27 agis_ddmendpoints.agis.ALL.json
[2025-10-11 15:28:55] -rw-------. 1 boincer umatlas    493361 Oct 11 15:27 log.46676269._052089.job.log.tgz.1
[2025-10-11 15:28:55] -rw-------. 1 boincer umatlas        95 Oct 11 15:27 pilot_heartbeat.json
[2025-10-11 15:28:55] -rw-------. 1 boincer umatlas      7828 Oct 11 15:27 heartbeat.json
[2025-10-11 15:28:55] -rw-------. 1 boincer umatlas      4823 Oct 11 15:28 pilotlog.txt
[2025-10-11 15:28:55] -rw-------. 1 boincer umatlas   2044784 Oct 11 15:28 log.46676269._052089.job.log.1
[2025-10-11 15:28:55] -rw-------. 1 boincer umatlas       357 Oct 11 15:28 output.list
[2025-10-11 15:28:55] -rw-r--r--. 1 boincer umatlas       620 Oct 11 15:28 runtime_log
[2025-10-11 15:28:55] -rw-------. 1 boincer umatlas   2560000 Oct 11 15:28 result.tar.gz
[2025-10-11 15:28:55] -rw-r--r--. 1 boincer umatlas      8709 Oct 11 15:28 runtime_log.err
[2025-10-11 15:28:55] -rw-------. 1 boincer umatlas       656 Oct 11 15:28 hz9NDm2ShR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8WfNDmJJt70n.diag
[2025-10-11 15:28:55] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 15:28 boinc_mmap_file
[2025-10-11 15:28:55] -rw-r--r--. 1 boincer umatlas        28 Oct 11 15:28 wrapper_checkpoint.txt
[2025-10-11 15:28:55] -rw-r--r--. 1 boincer umatlas     21066 Oct 11 15:28 stderr.txt
[2025-10-11 15:28:56] HITS file was successfully produced:
[2025-10-11 15:28:56] -rw-------. 1 boincer umatlas 201157672 Oct 11 15:26 shared/HITS.pool.root.1
[2025-10-11 15:28:56]  *** Contents of shared directory: ***
[2025-10-11 15:28:56] total 415172
[2025-10-11 15:28:56] -rw-r--r--. 2 boincer umatlas 220819567 Oct 11 10:54 ATLAS.root_0
[2025-10-11 15:28:56] -rw-r--r--. 2 boincer umatlas    569678 Oct 11 10:54 input.tar.gz
[2025-10-11 15:28:56] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 10:54 start_atlas.sh
[2025-10-11 15:28:56] -rw-------. 1 boincer umatlas 201157672 Oct 11 15:26 HITS.pool.root.1
[2025-10-11 15:28:56] -rw-------. 1 boincer umatlas   2560000 Oct 11 15:28 result.tar.gz
15:28:57 (406093): run_atlas exited; CPU time 46343.323068
15:28:57 (406093): called boinc_finish(0)

</stderr_txt>
]]>

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