Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:49:49 (3344288): wrapper (7.7.26015): starting
09:49:49 (3344288): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 09:49:49] Arguments: --nthreads 8
[2025-10-11 09:49:49] Threads: 8
[2025-10-11 09:49:49] Checking for CVMFS
[2025-10-11 09:49:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 09:49:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 09:49:51] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 09:49:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 09:49:53] 2.13.2.0 10966 61669 375532 151585 3 118 30186903 32935936 30921 16776704 4 108461438 99.521 134127606 8597 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 09:49:53] CVMFS is ok
[2025-10-11 09:49:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 09:49:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 09:49:53] Further information can be found at the LHC@home message board.
[2025-10-11 09:49:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 09:49:53] Checking for apptainer binary...
[2025-10-11 09:49:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 09:49:53] Running /usr/bin/apptainer --version
[2025-10-11 09:49:54] apptainer version 1.4.3-1.el9
[2025-10-11 09:49:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 09:49:56] c6-12-25-3.aglt2.org
[2025-10-11 09:49:56] apptainer works
[2025-10-11 09:49:56] Set ATHENA_PROC_NUMBER=8
[2025-10-11 09:49:56] Set ATHENA_CORE_NUMBER=8
[2025-10-11 09:49:56] Starting ATLAS job with PandaID=6838117557
[2025-10-11 09:49:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 22:23:01]  *** The last 200 lines of the pilot log: ***
[2025-10-11 22:23:01] 2025-10-12 02:22:00,253 | INFO     | fitting pss+swap vs Time
[2025-10-11 22:23:01] 2025-10-12 02:22:00,269 | INFO     | sum of square deviations: 122118612873.4298
[2025-10-11 22:23:01] 2025-10-12 02:22:00,383 | INFO     | sum of deviations: 587713761120.394
[2025-10-11 22:23:01] 2025-10-12 02:22:00,383 | INFO     | mean x: 1760213296.2728512
[2025-10-11 22:23:01] 2025-10-12 02:22:00,384 | INFO     | mean y: 2055607.6780354707
[2025-10-11 22:23:01] 2025-10-12 02:22:00,384 | INFO     | -- intersect: -8469229419.108635
[2025-10-11 22:23:01] 2025-10-12 02:22:00,384 | INFO     | intersect: -8469229419.108635
[2025-10-11 22:23:01] 2025-10-12 02:22:00,391 | INFO     | chi2: 8.778286816670501
[2025-10-11 22:23:01] 2025-10-12 02:22:00,398 | INFO     | sum of square deviations: 119636797122.83517
[2025-10-11 22:23:01] 2025-10-12 02:22:00,471 | INFO     | sum of deviations: 666528618755.4283
[2025-10-11 22:23:01] 2025-10-12 02:22:00,472 | INFO     | mean x: 1760213143.7802198
[2025-10-11 22:23:01] 2025-10-12 02:22:00,472 | INFO     | mean y: 2060432.8214285714
[2025-10-11 22:23:01] 2025-10-12 02:22:00,472 | INFO     | -- intersect: -9804558129.813463
[2025-10-11 22:23:01] 2025-10-12 02:22:00,473 | INFO     | intersect: -9804558129.813463
[2025-10-11 22:23:01] 2025-10-12 02:22:00,489 | INFO     | chi2: 7.455235319345861
[2025-10-11 22:23:01] 2025-10-12 02:22:00,490 | INFO     | current chi2=7.455235319345861 (change=15.071864532975674 %)
[2025-10-11 22:23:01] 2025-10-12 02:22:00,490 | INFO     | right removable region: 727
[2025-10-11 22:23:01] 2025-10-12 02:22:00,497 | INFO     | sum of square deviations: 119636316930.83513
[2025-10-11 22:23:01] 2025-10-12 02:22:00,528 | INFO     | sum of deviations: 403900392573.3513
[2025-10-11 22:23:01] 2025-10-12 02:22:00,529 | INFO     | mean x: 1760213448.7802198
[2025-10-11 22:23:01] 2025-10-12 02:22:00,529 | INFO     | mean y: 2066893.677197802
[2025-10-11 22:23:01] 2025-10-12 02:22:00,529 | INFO     | -- intersect: -5940534159.364603
[2025-10-11 22:23:01] 2025-10-12 02:22:00,530 | INFO     | intersect: -5940534159.364603
[2025-10-11 22:23:01] 2025-10-12 02:22:00,532 | INFO     | chi2: 5.381813828560406
[2025-10-11 22:23:01] 2025-10-12 02:22:00,533 | INFO     | current chi2=5.381813828560406 (change=38.69175226377869 %)
[2025-10-11 22:23:01] 2025-10-12 02:22:00,535 | INFO     | sum of square deviations: 117188148167.5628
[2025-10-11 22:23:01] 2025-10-12 02:22:00,565 | INFO     | sum of deviations: 283888220164.43146
[2025-10-11 22:23:01] 2025-10-12 02:22:00,565 | INFO     | mean x: 1760213601.2793915
[2025-10-11 22:23:01] 2025-10-12 02:22:00,566 | INFO     | mean y: 2074369.3443983402
[2025-10-11 22:23:01] 2025-10-12 02:22:00,566 | INFO     | -- intersect: -4262042046.7792125
[2025-10-11 22:23:01] 2025-10-12 02:22:00,566 | INFO     | intersect: -4262042046.7792125
[2025-10-11 22:23:01] 2025-10-12 02:22:00,569 | INFO     | chi2: 4.027882617718938
[2025-10-11 22:23:01] 2025-10-12 02:22:00,569 | INFO     | current chi2=4.027882617718938 (change=25.157525956330495 %)
[2025-10-11 22:23:01] 2025-10-12 02:22:00,572 | INFO     | sum of square deviations: 114773520348.67003
[2025-10-11 22:23:01] 2025-10-12 02:22:00,641 | INFO     | sum of deviations: 186465277164.95688
[2025-10-11 22:23:01] 2025-10-12 02:22:00,642 | INFO     | mean x: 1760213753.781337
[2025-10-11 22:23:01] 2025-10-12 02:22:00,642 | INFO     | mean y: 2080519.1908077993
[2025-10-11 22:23:01] 2025-10-12 02:22:00,642 | INFO     | -- intersect: -2857627403.606295
[2025-10-11 22:23:01] 2025-10-12 02:22:00,643 | INFO     | intersect: -2857627403.606295
[2025-10-11 22:23:01] 2025-10-12 02:22:00,650 | INFO     | chi2: 3.1223651060054083
[2025-10-11 22:23:01] 2025-10-12 02:22:00,651 | INFO     | current chi2=3.1223651060054083 (change=22.481228914916606 %)
[2025-10-11 22:23:01] 2025-10-12 02:22:00,651 | INFO     | left removable region: 30
[2025-10-11 22:23:01] 2025-10-12 02:22:00,662 | INFO     | sum of square deviations: 104994465545.11661
[2025-10-11 22:23:01] 2025-10-12 02:22:00,724 | INFO     | sum of deviations: 81843536454.8019
[2025-10-11 22:23:01] 2025-10-12 02:22:00,725 | INFO     | mean x: 1760214028.2955523
[2025-10-11 22:23:01] 2025-10-12 02:22:00,726 | INFO     | mean y: 2097785.9038737444
[2025-10-11 22:23:01] 2025-10-12 02:22:00,726 | INFO     | -- intersect: -1369994926.2701461
[2025-10-11 22:23:01] 2025-10-12 02:22:00,726 | INFO     | intersect: -1369994926.2701461
[2025-10-11 22:23:01] 2025-10-12 02:22:00,729 | INFO     | chi2: 0.5374339173049293
[2025-10-11 22:23:01] 2025-10-12 02:22:00,730 | INFO     | -- intersect: -1369994926.2701461
[2025-10-11 22:23:01] 2025-10-12 02:22:00,730 | INFO     | current memory leak: 0.78 B/s (using 697 data points, chi2=0.54)
[2025-10-11 22:23:01] 2025-10-12 02:22:00,732 | INFO     | could have reported an average CPU frequency of 999 MHz (28 samples)
[2025-10-11 22:23:01] 2025-10-12 02:22:00,733 | INFO     | ..............................
[2025-10-11 22:23:01] 2025-10-12 02:22:00,734 | INFO     | . Timing measurements:
[2025-10-11 22:23:01] 2025-10-12 02:22:00,734 | INFO     | . get job = 1 s
[2025-10-11 22:23:01] 2025-10-12 02:22:00,734 | INFO     | . initial setup = 13 s
[2025-10-11 22:23:01] 2025-10-12 02:22:00,734 | INFO     | . payload setup = 75 s
[2025-10-11 22:23:01] 2025-10-12 02:22:00,735 | INFO     | . stage-in = 3 s
[2025-10-11 22:23:01] 2025-10-12 02:22:00,735 | INFO     | . payload execution = 44726 s
[2025-10-11 22:23:01] 2025-10-12 02:22:00,735 | INFO     | . stage-out = 23 s
[2025-10-11 22:23:01] 2025-10-12 02:22:00,735 | INFO     | . log creation = 1 s
[2025-10-11 22:23:01] 2025-10-12 02:22:00,735 | INFO     | ..............................
[2025-10-11 22:23:01] 2025-10-12 02:22:01,373 | INFO     | 
[2025-10-11 22:23:01] 2025-10-12 02:22:01,374 | INFO     | job summary report
[2025-10-11 22:23:01] 2025-10-12 02:22:01,374 | INFO     | --------------------------------------------------
[2025-10-11 22:23:01] 2025-10-12 02:22:01,374 | INFO     | PanDA job id: 6838117557
[2025-10-11 22:23:01] 2025-10-12 02:22:01,375 | INFO     | task id: 46676269
[2025-10-11 22:23:01] 2025-10-12 02:22:01,375 | INFO     | errors: (none)
[2025-10-11 22:23:01] 2025-10-12 02:22:01,375 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 22:23:01] 2025-10-12 02:22:01,375 | INFO     | pilot state: finished 
[2025-10-11 22:23:01] 2025-10-12 02:22:01,376 | INFO     | transexitcode: 0
[2025-10-11 22:23:01] 2025-10-12 02:22:01,400 | INFO     | exeerrorcode: 0
[2025-10-11 22:23:01] 2025-10-12 02:22:01,401 | INFO     | exeerrordiag: 
[2025-10-11 22:23:01] 2025-10-12 02:22:01,401 | INFO     | exitcode: 0
[2025-10-11 22:23:01] 2025-10-12 02:22:01,401 | INFO     | exitmsg: OK
[2025-10-11 22:23:01] 2025-10-12 02:22:01,401 | INFO     | cpuconsumptiontime: 114947 s
[2025-10-11 22:23:01] 2025-10-12 02:22:01,401 | INFO     | nevents: 400
[2025-10-11 22:23:01] 2025-10-12 02:22:01,402 | INFO     | neventsw: 0
[2025-10-11 22:23:01] 2025-10-12 02:22:01,402 | INFO     | pid: 3376675
[2025-10-11 22:23:01] 2025-10-12 02:22:01,402 | INFO     | pgrp: 3376675
[2025-10-11 22:23:01] 2025-10-12 02:22:01,402 | INFO     | corecount: 8
[2025-10-11 22:23:01] 2025-10-12 02:22:01,402 | INFO     | event service: False
[2025-10-11 22:23:01] 2025-10-12 02:22:01,403 | INFO     | sizes: {0: 2347978, 2: 2348663, 4: 2348663, 5: 2348862, 6: 2348946, 18: 2348946, 35: 2349102, 48: 2349130, 60: 2349158, 69: 2349448, 75: 2349476, 44804: 2392047, 4
[2025-10-11 22:23:01] 2025-10-12 02:22:01,403 | INFO     | --------------------------------------------------
[2025-10-11 22:23:01] 2025-10-12 02:22:01,403 | INFO     | 
[2025-10-11 22:23:01] 2025-10-12 02:22:01,403 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-11 22:23:01] 2025-10-12 02:22:01,703 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 22:23:01] 2025-10-12 02:22:01,704 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 22:23:01] 2025-10-12 02:22:01,705 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 22:23:01] 2025-10-12 02:22:01,705 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 22:23:01] 2025-10-12 02:22:01,705 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 22:23:01] 2025-10-12 02:22:01,705 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 22:23:01] 2025-10-12 02:22:01,706 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 22:23:01] 2025-10-12 02:22:01,708 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 22:23:01] 2025-10-12 02:22:01,708 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 22:23:01] 2025-10-12 02:22:01,709 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 22:23:01] 2025-10-12 02:22:01,709 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 22:23:01] 2025-10-12 02:22:01,709 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 22:23:01] 2025-10-12 02:22:01,709 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 22:23:01] 2025-10-12 02:22:01,709 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 22:23:01] 2025-10-12 02:22:01,710 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 22:23:01] 2025-10-12 02:22:01,710 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 22:23:01] 2025-10-12 02:22:01,710 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 22:23:01] 2025-10-12 02:22:01,711 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 22:23:01] 2025-10-12 02:22:01,711 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 22:23:01] 2025-10-12 02:22:01,711 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 22:23:01] 2025-10-12 02:22:01,711 | INFO     | job 6838117557 has completed (purged errors)
[2025-10-11 22:23:01] 2025-10-12 02:22:01,716 | INFO     | overall cleanup function is called
[2025-10-11 22:23:01] 2025-10-12 02:22:02,733 | INFO     | --- collectZombieJob: --- 10, [3376675]
[2025-10-11 22:23:01] 2025-10-12 02:22:02,733 | INFO     | zombie collector waiting for pid 3376675
[2025-10-11 22:23:01] 2025-10-12 02:22:02,734 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 22:23:01] 2025-10-12 02:22:02,734 | INFO     | collected zombie processes
[2025-10-11 22:23:01] 2025-10-12 02:22:02,734 | INFO     | will attempt to kill all subprocesses of pid=3376675
[2025-10-11 22:23:01] 2025-10-12 02:22:14,574 | INFO     | PID=3354588 has CPU usage=10.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-11 22:23:01] 2025-10-12 02:22:14,579 | INFO     | .. there are 31 such processes running
[2025-10-11 22:23:01] 2025-10-12 02:22:14,777 | INFO     | process IDs to be killed: [3376675] (in reverse order)
[2025-10-11 22:23:01] 2025-10-12 02:22:15,127 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 22:23:01] 2025-10-12 02:22:15,162 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 22:23:01] 2025-10-12 02:22:15,214 | INFO     | did not find any defunct processes belonging to 3376675
[2025-10-11 22:23:01] 2025-10-12 02:22:15,251 | INFO     | did not find any defunct processes belonging to 3376675
[2025-10-11 22:23:01] 2025-10-12 02:22:15,252 | INFO     | ready for new job
[2025-10-11 22:23:01] 2025-10-12 02:22:15,253 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 22:23:01] 2025-10-12 02:22:15,261 | INFO     | ***************************************
[2025-10-11 22:23:01] 2025-10-12 02:22:15,261 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 22:23:01] 2025-10-12 02:22:15,261 | INFO     | ***************************************
[2025-10-11 22:23:01] 2025-10-12 02:22:15,262 | INFO     | 
[2025-10-11 22:23:01] 2025-10-12 02:22:15,385 | INFO     | architecture information:
[2025-10-11 22:23:01] 2025-10-12 02:22:15,419 | INFO     | executing command: cat /etc/os-release
[2025-10-11 22:23:01] 2025-10-12 02:22:15,669 | INFO     | cat /etc/os-release:
[2025-10-11 22:23:01] NAME="CentOS Linux"
[2025-10-11 22:23:01] VERSION="7 (Core)"
[2025-10-11 22:23:01] ID="centos"
[2025-10-11 22:23:01] ID_LIKE="rhel fedora"
[2025-10-11 22:23:01] VERSION_ID="7"
[2025-10-11 22:23:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 22:23:01] ANSI_COLOR="0;31"
[2025-10-11 22:23:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 22:23:01] HOME_URL="https://www.centos.org/"
[2025-10-11 22:23:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 22:23:01] 
[2025-10-11 22:23:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 22:23:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 22:23:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 22:23:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 22:23:01] 
[2025-10-11 22:23:01] 2025-10-12 02:22:15,669 | INFO     | ***************************************
[2025-10-11 22:23:01] 2025-10-12 02:22:16,174 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-11 22:23:01] 2025-10-12 02:22:16,391 | INFO     | sufficient remaining disk space (94153736192 B)
[2025-10-11 22:23:01] 2025-10-12 02:22:16,391 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 22:23:01] 2025-10-12 02:22:16,392 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 22:23:01] 2025-10-12 02:22:16,392 | INFO     | update_server=False
[2025-10-11 22:23:01] 2025-10-12 02:22:16,392 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 22:23:01] 2025-10-12 02:22:16,393 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 22:23:01] 2025-10-12 02:22:16,435 | INFO     | all payload control threads have been joined
[2025-10-11 22:23:01] 2025-10-12 02:22:16,755 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 22:23:01] 2025-10-12 02:22:17,290 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 22:23:01] 2025-10-12 02:22:17,291 | INFO     | aborting loop
[2025-10-11 22:23:01] 2025-10-12 02:22:17,400 | INFO     | [job] retrieve thread has finished
[2025-10-11 22:23:01] 2025-10-12 02:22:17,435 | INFO     | all data control threads have been joined
[2025-10-11 22:23:01] 2025-10-12 02:22:17,459 | INFO     | [payload] control thread has finished
[2025-10-11 22:23:01] 2025-10-12 02:22:17,696 | INFO     | [payload] failed_post thread has finished
[2025-10-11 22:23:01] 2025-10-12 02:22:17,772 | INFO     | [payload] validate_post thread has finished
[2025-10-11 22:23:01] 2025-10-12 02:22:17,818 | INFO     | [data] copytool_in thread has finished
[2025-10-11 22:23:01] 2025-10-12 02:22:17,888 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 22:23:01] 2025-10-12 02:22:17,889 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 22:23:01] 2025-10-12 02:22:18,123 | INFO     | all job control threads have been joined
[2025-10-11 22:23:01] 2025-10-12 02:22:18,297 | INFO     | [job] job monitor thread has finished
[2025-10-11 22:23:01] 2025-10-12 02:22:18,448 | INFO     | [data] control thread has finished
[2025-10-11 22:23:01] 2025-10-12 02:22:18,771 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 22:23:01] 2025-10-12 02:22:18,774 | INFO     | [data] copytool_out thread has finished
[2025-10-11 22:23:01] 2025-10-12 02:22:18,798 | INFO     | [job] validate thread has finished
[2025-10-11 22:23:01] 2025-10-12 02:22:18,851 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 22:23:01] 2025-10-12 02:22:18,870 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 22:23:01] 2025-10-12 02:22:19,139 | INFO     | [job] control thread has finished
[2025-10-11 22:23:01] 2025-10-12 02:22:19,796 | INFO     | [job] queue monitor thread has finished
[2025-10-11 22:23:01] 2025-10-12 02:22:20,424 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 22:23:01] 2025-10-12 02:22:28,873 | INFO     | [monitor] cgroup control has ended
[2025-10-11 22:23:01] 2025-10-12 02:22:29,174 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139789906716480)>', '<ExcThread(monitor, started 139789407860480)>']
[2025-10-11 22:23:01] 2025-10-12 02:22:34,201 | INFO     | all workflow threads have been joined
[2025-10-11 22:23:01] 2025-10-12 02:22:34,202 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 22:23:01] 2025-10-12 02:22:34,202 | INFO     | traces error code: 0
[2025-10-11 22:23:01] 2025-10-12 02:22:34,203 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 22:23:01] 2025-10-12 02:22:57,372 | INFO     | PID=3354588 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 22:23:01] 2025-10-12 02:22:57,373 | INFO     | .. there are 31 such processes running
[2025-10-11 22:23:01] 2025-10-12 02:22:57,509 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 22:23:01] 2025-10-12 02:22:57,510 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 22:23:01] 2025-10-12 02:22:57,510 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 22:23:01] 2025-10-12 02:22:57,510 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 22:23:01] 2025-10-12 02:22:57,511 | CRITICAL | thread 'MainThread' is not alive
[2025-10-11 22:23:01] 2025-10-12 02:22:57,511 | INFO     | [monitor] control thread has ended
[2025-10-11 22:23:01] 2025-10-12 02:23:00,429 [wrapper] ==== pilot stdout END ====
[2025-10-11 22:23:01] 2025-10-12 02:23:00,440 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 22:23:01] 2025-10-12 02:23:00,492 [wrapper] pilotpid: 3354588
[2025-10-11 22:23:01] 2025-10-12 02:23:00,522 [wrapper] Pilot exit status: 0
[2025-10-11 22:23:01] 2025-10-12 02:23:00,674 [wrapper] pandaids: 6838117557
[2025-10-11 22:23:01] 2025-10-12 02:23:00,937 [wrapper] cleanup supervisor_pilot 1028955 3354589
[2025-10-11 22:23:01] 2025-10-12 02:23:00,944 [wrapper] Test setup, not cleaning
[2025-10-11 22:23:01] 2025-10-12 02:23:00,952 [wrapper] apfmon messages muted
[2025-10-11 22:23:01] 2025-10-12 02:23:00,958 [wrapper] ==== wrapper stdout END ====
[2025-10-11 22:23:01] 2025-10-12 02:23:00,964 [wrapper] ==== wrapper stderr END ====
[2025-10-11 22:23:01]  *** Error codes and diagnostics ***
[2025-10-11 22:23:01]     "exeErrorCode": 0,
[2025-10-11 22:23:01]     "exeErrorDiag": "",
[2025-10-11 22:23:01]     "pilotErrorCode": 0,
[2025-10-11 22:23:01]     "pilotErrorDiag": "",
[2025-10-11 22:23:01]  *** Listing of results directory ***
[2025-10-11 22:23:01] total 419972
[2025-10-11 22:23:01] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 01:36 pilot3.tar.gz
[2025-10-11 22:23:01] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 01:39 queuedata.json
[2025-10-11 22:23:01] -rwx------. 1 boincer umatlas     36292 Oct 11 01:39 runpilot2-wrapper.sh
[2025-10-11 22:23:01] -rw-r--r--. 1 boincer umatlas       100 Oct 11 09:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 22:23:01] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 09:49 run_atlas
[2025-10-11 22:23:01] -rw-r--r--. 1 boincer umatlas       105 Oct 11 09:49 job.xml
[2025-10-11 22:23:01] -rw-r--r--. 2 boincer umatlas 221424678 Oct 11 09:49 EVNT.46676267._002096.pool.root.1
[2025-10-11 22:23:01] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 09:49 start_atlas.sh
[2025-10-11 22:23:01] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 09:49 shared
[2025-10-11 22:23:01] -rw-r--r--. 2 boincer umatlas    569681 Oct 11 09:49 input.tar.gz
[2025-10-11 22:23:01] -rw-r--r--. 1 boincer umatlas         0 Oct 11 09:49 boinc_lockfile
[2025-10-11 22:23:01] -rw-r--r--. 1 boincer umatlas      2549 Oct 11 09:49 pandaJob.out
[2025-10-11 22:23:01] -rw-------. 1 boincer umatlas    975520 Oct 11 09:51 agis_schedconf.cvmfs.json
[2025-10-11 22:23:01] drwx------. 5 boincer umatlas      4096 Oct 11 09:51 pilot3
[2025-10-11 22:23:01] -rw-------. 1 boincer umatlas 195013929 Oct 11 22:17 HITS.46676269._052149.pool.root.1
[2025-10-11 22:23:01] -rw-r--r--. 1 boincer umatlas       532 Oct 11 22:18 boinc_task_state.xml
[2025-10-11 22:23:01] -rw-------. 1 boincer umatlas      1043 Oct 11 22:20 memory_monitor_summary.json
[2025-10-11 22:23:01] -rw-------. 1 boincer umatlas   1560580 Oct 11 22:21 agis_ddmendpoints.agis.ALL.json
[2025-10-11 22:23:01] -rw-------. 1 boincer umatlas    749939 Oct 11 22:21 log.46676269._052149.job.log.tgz.1
[2025-10-11 22:23:01] -rw-r--r--. 1 boincer umatlas      6859 Oct 11 22:21 init_data.xml
[2025-10-11 22:23:01] -rw-------. 1 boincer umatlas      7838 Oct 11 22:22 heartbeat.json
[2025-10-11 22:23:01] -rw-------. 1 boincer umatlas        95 Oct 11 22:22 pilot_heartbeat.json
[2025-10-11 22:23:01] -rw-r--r--. 1 boincer umatlas        29 Oct 11 22:22 wrapper_checkpoint.txt
[2025-10-11 22:23:01] -rw-------. 1 boincer umatlas       893 Oct 11 22:22 pilotlog.txt
[2025-10-11 22:23:01] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 22:23 boinc_mmap_file
[2025-10-11 22:23:01] -rw-------. 1 boincer umatlas   4107960 Oct 11 22:23 log.46676269._052149.job.log.1
[2025-10-11 22:23:01] -rw-------. 1 boincer umatlas       357 Oct 11 22:23 output.list
[2025-10-11 22:23:01] -rw-r--r--. 1 boincer umatlas       620 Oct 11 22:23 runtime_log
[2025-10-11 22:23:01] -rw-------. 1 boincer umatlas   4874240 Oct 11 22:23 result.tar.gz
[2025-10-11 22:23:01] -rw-r--r--. 1 boincer umatlas      8714 Oct 11 22:23 runtime_log.err
[2025-10-11 22:23:01] -rw-------. 1 boincer umatlas       662 Oct 11 22:23 doVNDmtVhR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmLXfNDmcClypn.diag
[2025-10-11 22:23:01] -rw-r--r--. 1 boincer umatlas     21144 Oct 11 22:23 stderr.txt
[2025-10-11 22:23:01] HITS file was successfully produced:
[2025-10-11 22:23:01] -rw-------. 1 boincer umatlas 195013929 Oct 11 22:17 shared/HITS.pool.root.1
[2025-10-11 22:23:01]  *** Contents of shared directory: ***
[2025-10-11 22:23:01] total 412024
[2025-10-11 22:23:01] -rw-r--r--. 2 boincer umatlas 221424678 Oct 11 09:49 ATLAS.root_0
[2025-10-11 22:23:01] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 09:49 start_atlas.sh
[2025-10-11 22:23:01] -rw-r--r--. 2 boincer umatlas    569681 Oct 11 09:49 input.tar.gz
[2025-10-11 22:23:01] -rw-------. 1 boincer umatlas 195013929 Oct 11 22:17 HITS.pool.root.1
[2025-10-11 22:23:01] -rw-------. 1 boincer umatlas   4874240 Oct 11 22:23 result.tar.gz
22:23:03 (3344288): run_atlas exited; CPU time 118582.974243
22:23:03 (3344288): called boinc_finish(0)

</stderr_txt>
]]>

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