Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:49:23 (3616315): wrapper (7.7.26015): starting
07:49:23 (3616315): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 07:49:23] Arguments: --nthreads 8
[2025-10-11 07:49:23] Threads: 8
[2025-10-11 07:49:23] Checking for CVMFS
[2025-10-11 07:49:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 07:49:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 07:49:24] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 07:49:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 07:49:25] 2.13.2.0 552491 35529 132776 151583 3 260 38996092 40960000 64682 16776704 0 372035079 99.796 194868641 32740 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 07:49:25] CVMFS is ok
[2025-10-11 07:49:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 07:49:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 07:49:25] Further information can be found at the LHC@home message board.
[2025-10-11 07:49:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 07:49:25] Checking for apptainer binary...
[2025-10-11 07:49:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 07:49:25] Running /usr/bin/apptainer --version
[2025-10-11 07:49:26] apptainer version 1.4.3-1.el9
[2025-10-11 07:49:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 07:49:28] c8-7-5.aglt2.org
[2025-10-11 07:49:28] apptainer works
[2025-10-11 07:49:28] Set ATHENA_PROC_NUMBER=8
[2025-10-11 07:49:28] Set ATHENA_CORE_NUMBER=8
[2025-10-11 07:49:28] Starting ATLAS job with PandaID=6837932831
[2025-10-11 07:49:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 09:54:56]  *** The last 200 lines of the pilot log: ***
[2025-10-11 09:54:56] 2025-10-11 13:54:03,664 | INFO     | extracted standard info from prmon json
[2025-10-11 09:54:56] 2025-10-11 13:54:03,664 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 09:54:56] 2025-10-11 13:54:03,664 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 09:54:56] 2025-10-11 13:54:03,665 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 09:54:56] 2025-10-11 13:54:03,665 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 09:54:56] 2025-10-11 13:54:03,689 | INFO     | fitting pss+swap vs Time
[2025-10-11 09:54:56] 2025-10-11 13:54:03,689 | INFO     | sum of square deviations: 509472715.3305086
[2025-10-11 09:54:56] 2025-10-11 13:54:03,690 | INFO     | sum of deviations: 33786864645.95759
[2025-10-11 09:54:56] 2025-10-11 13:54:03,690 | INFO     | mean x: 1760187201.6355932
[2025-10-11 09:54:56] 2025-10-11 13:54:03,690 | INFO     | mean y: 2371193.533898305
[2025-10-11 09:54:56] 2025-10-11 13:54:03,690 | INFO     | -- intersect: -116728525169.83284
[2025-10-11 09:54:56] 2025-10-11 13:54:03,690 | INFO     | intersect: -116728525169.83284
[2025-10-11 09:54:56] 2025-10-11 13:54:03,690 | INFO     | chi2: 4.673210271182315
[2025-10-11 09:54:56] 2025-10-11 13:54:03,690 | INFO     | sum of square deviations: 447420617.73451203
[2025-10-11 09:54:56] 2025-10-11 13:54:03,691 | INFO     | sum of deviations: 39839015951.82299
[2025-10-11 09:54:56] 2025-10-11 13:54:03,691 | INFO     | mean x: 1760187049.141593
[2025-10-11 09:54:56] 2025-10-11 13:54:03,691 | INFO     | mean y: 2385407.761061947
[2025-10-11 09:54:56] 2025-10-11 13:54:03,691 | INFO     | -- intersect: -156727360941.46515
[2025-10-11 09:54:56] 2025-10-11 13:54:03,691 | INFO     | intersect: -156727360941.46515
[2025-10-11 09:54:56] 2025-10-11 13:54:03,691 | INFO     | chi2: 3.933578669890643
[2025-10-11 09:54:56] 2025-10-11 13:54:03,691 | INFO     | current chi2=3.933578669890643 (change=15.827055886028987 %)
[2025-10-11 09:54:56] 2025-10-11 13:54:03,691 | INFO     | right removable region: 112
[2025-10-11 09:54:56] 2025-10-11 13:54:03,691 | INFO     | sum of square deviations: 447410857.73451203
[2025-10-11 09:54:56] 2025-10-11 13:54:03,691 | INFO     | sum of deviations: -619676092.4778767
[2025-10-11 09:54:56] 2025-10-11 13:54:03,691 | INFO     | mean x: 1760187354.141593
[2025-10-11 09:54:56] 2025-10-11 13:54:03,691 | INFO     | mean y: 2455407.6548672565
[2025-10-11 09:54:56] 2025-10-11 13:54:03,691 | INFO     | -- intersect: 2440362317.5731544
[2025-10-11 09:54:56] 2025-10-11 13:54:03,691 | INFO     | intersect: 2440362317.5731544
[2025-10-11 09:54:56] 2025-10-11 13:54:03,692 | INFO     | chi2: 1.0233453205510465
[2025-10-11 09:54:56] 2025-10-11 13:54:03,692 | INFO     | current chi2=1.0233453205510465 (change=78.10187727135715 %)
[2025-10-11 09:54:56] 2025-10-11 13:54:03,692 | INFO     | sum of square deviations: 390611804.9166671
[2025-10-11 09:54:56] 2025-10-11 13:54:03,710 | INFO     | sum of deviations: -7547179537.555555
[2025-10-11 09:54:56] 2025-10-11 13:54:03,710 | INFO     | mean x: 1760187506.6388888
[2025-10-11 09:54:56] 2025-10-11 13:54:03,710 | INFO     | mean y: 2473743.3703703703
[2025-10-11 09:54:56] 2025-10-11 13:54:03,711 | INFO     | -- intersect: 34011817457.905704
[2025-10-11 09:54:56] 2025-10-11 13:54:03,711 | INFO     | intersect: 34011817457.905704
[2025-10-11 09:54:56] 2025-10-11 13:54:03,711 | INFO     | chi2: 0.8335355642519493
[2025-10-11 09:54:56] 2025-10-11 13:54:03,711 | INFO     | current chi2=0.8335355642519493 (change=18.54796738571974 %)
[2025-10-11 09:54:56] 2025-10-11 13:54:03,711 | INFO     | left removable region: 20
[2025-10-11 09:54:56] 2025-10-11 13:54:03,711 | INFO     | sum of square deviations: 241449906.86956495
[2025-10-11 09:54:56] 2025-10-11 13:54:03,711 | INFO     | sum of deviations: 195118489.1304349
[2025-10-11 09:54:56] 2025-10-11 13:54:03,711 | INFO     | mean x: 1760187628.652174
[2025-10-11 09:54:56] 2025-10-11 13:54:03,711 | INFO     | mean y: 2492225.347826087
[2025-10-11 09:54:56] 2025-10-11 13:54:03,711 | INFO     | -- intersect: -1419935950.92076
[2025-10-11 09:54:56] 2025-10-11 13:54:03,711 | INFO     | intersect: -1419935950.92076
[2025-10-11 09:54:56] 2025-10-11 13:54:03,711 | INFO     | chi2: 0.0026783948518598034
[2025-10-11 09:54:56] 2025-10-11 13:54:03,711 | INFO     | -- intersect: -1419935950.92076
[2025-10-11 09:54:56] 2025-10-11 13:54:03,712 | INFO     | current memory leak: 0.81 B/s (using 92 data points, chi2=0.00)
[2025-10-11 09:54:56] 2025-10-11 13:54:03,712 | INFO     | could have reported an average CPU frequency of 3792 MHz (7 samples)
[2025-10-11 09:54:56] 2025-10-11 13:54:03,712 | INFO     | ..............................
[2025-10-11 09:54:56] 2025-10-11 13:54:03,712 | INFO     | . Timing measurements:
[2025-10-11 09:54:56] 2025-10-11 13:54:03,712 | INFO     | . get job = 0 s
[2025-10-11 09:54:56] 2025-10-11 13:54:03,712 | INFO     | . initial setup = 8 s
[2025-10-11 09:54:56] 2025-10-11 13:54:03,712 | INFO     | . payload setup = 51 s
[2025-10-11 09:54:56] 2025-10-11 13:54:03,712 | INFO     | . stage-in = 0 s
[2025-10-11 09:54:56] 2025-10-11 13:54:03,712 | INFO     | . payload execution = 7205 s
[2025-10-11 09:54:56] 2025-10-11 13:54:03,712 | INFO     | . stage-out = 3 s
[2025-10-11 09:54:56] 2025-10-11 13:54:03,712 | INFO     | . log creation = 0 s
[2025-10-11 09:54:56] 2025-10-11 13:54:03,712 | INFO     | ..............................
[2025-10-11 09:54:56] 2025-10-11 13:54:03,888 | INFO     | time since job start (7380s) is within the limit (172800.0s)
[2025-10-11 09:54:56] 2025-10-11 13:54:04,020 | INFO     | 
[2025-10-11 09:54:56] 2025-10-11 13:54:04,020 | INFO     | job summary report
[2025-10-11 09:54:56] 2025-10-11 13:54:04,020 | INFO     | --------------------------------------------------
[2025-10-11 09:54:56] 2025-10-11 13:54:04,020 | INFO     | PanDA job id: 6837932831
[2025-10-11 09:54:56] 2025-10-11 13:54:04,020 | INFO     | task id: 46676269
[2025-10-11 09:54:56] 2025-10-11 13:54:04,020 | INFO     | errors: (none)
[2025-10-11 09:54:56] 2025-10-11 13:54:04,020 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 09:54:56] 2025-10-11 13:54:04,021 | INFO     | pilot state: finished 
[2025-10-11 09:54:56] 2025-10-11 13:54:04,021 | INFO     | transexitcode: 0
[2025-10-11 09:54:56] 2025-10-11 13:54:04,021 | INFO     | exeerrorcode: 0
[2025-10-11 09:54:56] 2025-10-11 13:54:04,021 | INFO     | exeerrordiag: 
[2025-10-11 09:54:56] 2025-10-11 13:54:04,021 | INFO     | exitcode: 0
[2025-10-11 09:54:56] 2025-10-11 13:54:04,021 | INFO     | exitmsg: OK
[2025-10-11 09:54:56] 2025-10-11 13:54:04,021 | INFO     | cpuconsumptiontime: 24071 s
[2025-10-11 09:54:56] 2025-10-11 13:54:04,021 | INFO     | nevents: 400
[2025-10-11 09:54:56] 2025-10-11 13:54:04,021 | INFO     | neventsw: 0
[2025-10-11 09:54:56] 2025-10-11 13:54:04,021 | INFO     | pid: 3641915
[2025-10-11 09:54:56] 2025-10-11 13:54:04,021 | INFO     | pgrp: 3641915
[2025-10-11 09:54:56] 2025-10-11 13:54:04,021 | INFO     | corecount: 8
[2025-10-11 09:54:56] 2025-10-11 13:54:04,021 | INFO     | event service: False
[2025-10-11 09:54:56] 2025-10-11 13:54:04,021 | INFO     | sizes: {0: 2348028, 1: 2348713, 2: 2348912, 13: 2348912, 24: 2348968, 35: 2348996, 39: 2349414, 46: 2349442, 7258: 2376635, 7262: 2385633, 7263: 2385689, 7299: 238
[2025-10-11 09:54:56] 2025-10-11 13:54:04,021 | INFO     | --------------------------------------------------
[2025-10-11 09:54:56] 2025-10-11 13:54:04,021 | INFO     | 
[2025-10-11 09:54:56] 2025-10-11 13:54:04,021 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-10-11 09:54:56] 2025-10-11 13:54:04,094 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 09:54:56] 2025-10-11 13:54:04,095 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 09:54:56] 2025-10-11 13:54:04,095 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 09:54:56] 2025-10-11 13:54:04,095 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 09:54:56] 2025-10-11 13:54:04,095 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 09:54:56] 2025-10-11 13:54:04,095 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 09:54:56] 2025-10-11 13:54:04,095 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 09:54:56] 2025-10-11 13:54:04,095 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 09:54:56] 2025-10-11 13:54:04,095 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 09:54:56] 2025-10-11 13:54:04,095 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 09:54:56] 2025-10-11 13:54:04,095 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 09:54:56] 2025-10-11 13:54:04,095 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 09:54:56] 2025-10-11 13:54:04,095 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 09:54:56] 2025-10-11 13:54:04,095 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 09:54:56] 2025-10-11 13:54:04,095 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 09:54:56] 2025-10-11 13:54:04,095 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 09:54:56] 2025-10-11 13:54:04,095 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 09:54:56] 2025-10-11 13:54:04,095 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 09:54:56] 2025-10-11 13:54:04,095 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 09:54:56] 2025-10-11 13:54:04,095 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 09:54:56] 2025-10-11 13:54:04,096 | INFO     | job 6837932831 has completed (purged errors)
[2025-10-11 09:54:56] 2025-10-11 13:54:04,096 | INFO     | overall cleanup function is called
[2025-10-11 09:54:56] 2025-10-11 13:54:05,107 | INFO     | --- collectZombieJob: --- 10, [3641915]
[2025-10-11 09:54:56] 2025-10-11 13:54:05,107 | INFO     | zombie collector waiting for pid 3641915
[2025-10-11 09:54:56] 2025-10-11 13:54:05,107 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 09:54:56] 2025-10-11 13:54:05,107 | INFO     | collected zombie processes
[2025-10-11 09:54:56] 2025-10-11 13:54:05,107 | INFO     | will attempt to kill all subprocesses of pid=3641915
[2025-10-11 09:54:56] 2025-10-11 13:54:10,849 | INFO     | PID=3623825 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 09:54:56] 2025-10-11 13:54:10,859 | INFO     | .. there are 84 such processes running
[2025-10-11 09:54:56] 2025-10-11 13:54:10,929 | INFO     | process IDs to be killed: [3641915] (in reverse order)
[2025-10-11 09:54:56] 2025-10-11 13:54:11,448 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 09:54:56] 2025-10-11 13:54:11,448 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 09:54:56] 2025-10-11 13:54:11,548 | INFO     | did not find any defunct processes belonging to 3641915
[2025-10-11 09:54:56] 2025-10-11 13:54:11,615 | INFO     | did not find any defunct processes belonging to 3641915
[2025-10-11 09:54:56] 2025-10-11 13:54:11,615 | INFO     | ready for new job
[2025-10-11 09:54:56] 2025-10-11 13:54:11,615 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 09:54:56] 2025-10-11 13:54:11,617 | INFO     | ***************************************
[2025-10-11 09:54:56] 2025-10-11 13:54:11,617 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 09:54:56] 2025-10-11 13:54:11,617 | INFO     | ***************************************
[2025-10-11 09:54:56] 2025-10-11 13:54:11,617 | INFO     | 
[2025-10-11 09:54:56] 2025-10-11 13:54:11,687 | INFO     | architecture information:
[2025-10-11 09:54:56] 2025-10-11 13:54:11,696 | INFO     | executing command: cat /etc/os-release
[2025-10-11 09:54:56] 2025-10-11 13:54:11,793 | INFO     | cat /etc/os-release:
[2025-10-11 09:54:56] NAME="CentOS Linux"
[2025-10-11 09:54:56] VERSION="7 (Core)"
[2025-10-11 09:54:56] ID="centos"
[2025-10-11 09:54:56] ID_LIKE="rhel fedora"
[2025-10-11 09:54:56] VERSION_ID="7"
[2025-10-11 09:54:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 09:54:56] ANSI_COLOR="0;31"
[2025-10-11 09:54:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 09:54:56] HOME_URL="https://www.centos.org/"
[2025-10-11 09:54:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 09:54:56] 
[2025-10-11 09:54:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 09:54:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 09:54:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 09:54:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 09:54:56] 
[2025-10-11 09:54:56] 2025-10-11 13:54:11,793 | INFO     | ***************************************
[2025-10-11 09:54:56] 2025-10-11 13:54:12,308 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-10-11 09:54:56] 2025-10-11 13:54:12,382 | INFO     | sufficient remaining disk space (168782987264 B)
[2025-10-11 09:54:56] 2025-10-11 13:54:12,383 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 09:54:56] 2025-10-11 13:54:12,383 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 09:54:56] 2025-10-11 13:54:12,383 | INFO     | update_server=False
[2025-10-11 09:54:56] 2025-10-11 13:54:12,383 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 09:54:56] 2025-10-11 13:54:12,748 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 09:54:56] 2025-10-11 13:54:12,748 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 09:54:56] 2025-10-11 13:54:12,748 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 09:54:56] 2025-10-11 13:54:12,749 | INFO     | will abort loop
[2025-10-11 09:54:56] 2025-10-11 13:54:13,087 | INFO     | all data control threads have been joined
[2025-10-11 09:54:56] 2025-10-11 13:54:13,148 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 09:54:56] 2025-10-11 13:54:13,161 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 09:54:56] 2025-10-11 13:54:13,388 | INFO     | [job] retrieve thread has finished
[2025-10-11 09:54:56] 2025-10-11 13:54:13,754 | INFO     | [job] job monitor thread has finished
[2025-10-11 09:54:56] 2025-10-11 13:54:13,900 | INFO     | all job control threads have been joined
[2025-10-11 09:54:56] 2025-10-11 13:54:13,910 | INFO     | all payload control threads have been joined
[2025-10-11 09:54:56] 2025-10-11 13:54:14,062 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 09:54:56] 2025-10-11 13:54:14,098 | INFO     | [data] control thread has finished
[2025-10-11 09:54:56] 2025-10-11 13:54:14,154 | INFO     | [job] queue monitor thread has finished
[2025-10-11 09:54:56] 2025-10-11 13:54:14,406 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 09:54:56] 2025-10-11 13:54:14,483 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 09:54:56] 2025-10-11 13:54:14,533 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 09:54:56] 2025-10-11 13:54:14,554 | INFO     | [data] copytool_in thread has finished
[2025-10-11 09:54:56] 2025-10-11 13:54:14,795 | INFO     | [job] validate thread has finished
[2025-10-11 09:54:56] 2025-10-11 13:54:14,798 | INFO     | [payload] validate_post thread has finished
[2025-10-11 09:54:56] 2025-10-11 13:54:14,906 | INFO     | [payload] failed_post thread has finished
[2025-10-11 09:54:56] 2025-10-11 13:54:14,923 | INFO     | [payload] control thread has finished
[2025-10-11 09:54:56] 2025-10-11 13:54:14,923 | INFO     | [job] control thread has finished
[2025-10-11 09:54:56] 2025-10-11 13:54:14,938 | INFO     | [monitor] cgroup control has ended
[2025-10-11 09:54:56] 2025-10-11 13:54:15,192 | INFO     | [data] copytool_out thread has finished
[2025-10-11 09:54:56] 2025-10-11 13:54:18,504 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 09:54:56] 2025-10-11 13:54:23,210 | INFO     | job.realtimelogging is not enabled
[2025-10-11 09:54:56] 2025-10-11 13:54:24,216 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 09:54:56] 2025-10-11 13:54:24,543 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140244583262016)>', '<ExcThread(monitor, started 140243944589056)>']
[2025-10-11 09:54:56] 2025-10-11 13:54:29,590 | INFO     | all workflow threads have been joined
[2025-10-11 09:54:56] 2025-10-11 13:54:29,590 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 09:54:56] 2025-10-11 13:54:29,590 | INFO     | traces error code: 0
[2025-10-11 09:54:56] 2025-10-11 13:54:29,591 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 09:54:56] 2025-10-11 13:54:45,012 | INFO     | PID=3623825 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 09:54:56] 2025-10-11 13:54:45,012 | INFO     | .. there are 84 such processes running
[2025-10-11 09:54:56] 2025-10-11 13:54:45,013 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 09:54:56] 2025-10-11 13:54:45,013 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 09:54:56] 2025-10-11 13:54:45,013 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 09:54:56] 2025-10-11 13:54:45,013 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 09:54:56] 2025-10-11 13:54:45,013 | INFO     | [monitor] control thread has ended
[2025-10-11 09:54:56] 2025-10-11 13:54:45,787 [wrapper] ==== pilot stdout END ====
[2025-10-11 09:54:56] 2025-10-11 13:54:45,808 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 09:54:56] 2025-10-11 13:54:45,912 [wrapper] pilotpid: 3623825
[2025-10-11 09:54:56] 2025-10-11 13:54:45,997 [wrapper] Pilot exit status: 0
[2025-10-11 09:54:56] 2025-10-11 13:54:46,170 [wrapper] pandaids: 6837932831
[2025-10-11 09:54:56] 2025-10-11 13:54:46,478 [wrapper] cleanup supervisor_pilot  604862 3623826
[2025-10-11 09:54:56] 2025-10-11 13:54:46,513 [wrapper] Test setup, not cleaning
[2025-10-11 09:54:56] 2025-10-11 13:54:46,559 [wrapper] apfmon messages muted
[2025-10-11 09:54:56] 2025-10-11 13:54:46,608 [wrapper] ==== wrapper stdout END ====
[2025-10-11 09:54:56] 2025-10-11 13:54:46,642 [wrapper] ==== wrapper stderr END ====
[2025-10-11 09:54:56]  *** Error codes and diagnostics ***
[2025-10-11 09:54:56]     "exeErrorCode": 0,
[2025-10-11 09:54:56]     "exeErrorDiag": "",
[2025-10-11 09:54:56]     "pilotErrorCode": 0,
[2025-10-11 09:54:56]     "pilotErrorDiag": "",
[2025-10-11 09:54:56]  *** Listing of results directory ***
[2025-10-11 09:54:57] total 421196
[2025-10-11 09:54:57] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 22:04 pilot3.tar.gz
[2025-10-11 09:54:57] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 22:05 queuedata.json
[2025-10-11 09:54:57] -rwx------. 1 boincer umatlas     36292 Oct 10 22:06 runpilot2-wrapper.sh
[2025-10-11 09:54:57] -rw-r--r--. 1 boincer umatlas       100 Oct 11 07:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 09:54:57] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 07:49 run_atlas
[2025-10-11 09:54:57] -rw-r--r--. 1 boincer umatlas       105 Oct 11 07:49 job.xml
[2025-10-11 09:54:57] -rw-r--r--. 2 boincer umatlas 221485247 Oct 11 07:49 EVNT.46676267._001983.pool.root.1
[2025-10-11 09:54:57] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 07:49 shared
[2025-10-11 09:54:57] -rw-r--r--. 2 boincer umatlas    569676 Oct 11 07:49 input.tar.gz
[2025-10-11 09:54:57] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 07:49 start_atlas.sh
[2025-10-11 09:54:57] -rw-r--r--. 1 boincer umatlas         0 Oct 11 07:49 boinc_lockfile
[2025-10-11 09:54:57] -rw-r--r--. 1 boincer umatlas      2549 Oct 11 07:49 pandaJob.out
[2025-10-11 09:54:57] -rw-------. 1 boincer umatlas    975509 Oct 11 07:50 agis_schedconf.cvmfs.json
[2025-10-11 09:54:57] -rw-------. 1 boincer umatlas   1560580 Oct 11 07:50 agis_ddmendpoints.agis.ALL.json
[2025-10-11 09:54:57] drwx------. 5 boincer umatlas      4096 Oct 11 07:51 pilot3
[2025-10-11 09:54:57] -rw-r--r--. 1 boincer umatlas      7162 Oct 11 09:49 init_data.xml
[2025-10-11 09:54:57] -rw-------. 1 boincer umatlas 203363189 Oct 11 09:52 HITS.46676269._049177.pool.root.1
[2025-10-11 09:54:57] -rw-r--r--. 1 boincer umatlas       530 Oct 11 09:52 boinc_task_state.xml
[2025-10-11 09:54:57] -rw-------. 1 boincer umatlas      1049 Oct 11 09:53 memory_monitor_summary.json
[2025-10-11 09:54:57] -rw-------. 1 boincer umatlas    355469 Oct 11 09:53 log.46676269._049177.job.log.tgz.1
[2025-10-11 09:54:57] -rw-------. 1 boincer umatlas      7799 Oct 11 09:54 heartbeat.json
[2025-10-11 09:54:57] -rw-------. 1 boincer umatlas        95 Oct 11 09:54 pilot_heartbeat.json
[2025-10-11 09:54:57] -rw-------. 1 boincer umatlas       823 Oct 11 09:54 pilotlog.txt
[2025-10-11 09:54:57] -rw-------. 1 boincer umatlas    921447 Oct 11 09:54 log.46676269._049177.job.log.1
[2025-10-11 09:54:57] -rw-------. 1 boincer umatlas       357 Oct 11 09:54 output.list
[2025-10-11 09:54:57] -rw-r--r--. 1 boincer umatlas       620 Oct 11 09:54 runtime_log
[2025-10-11 09:54:57] -rw-------. 1 boincer umatlas   1300480 Oct 11 09:54 result.tar.gz
[2025-10-11 09:54:57] -rw-r--r--. 1 boincer umatlas      8693 Oct 11 09:54 runtime_log.err
[2025-10-11 09:54:57] -rw-------. 1 boincer umatlas       654 Oct 11 09:54 Pb5LDmXBeR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm56eNDmy72Ahn.diag
[2025-10-11 09:54:57] -rw-r--r--. 1 boincer umatlas        27 Oct 11 09:54 wrapper_checkpoint.txt
[2025-10-11 09:54:57] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 09:54 boinc_mmap_file
[2025-10-11 09:54:57] -rw-r--r--. 1 boincer umatlas     21240 Oct 11 09:54 stderr.txt
[2025-10-11 09:54:57] HITS file was successfully produced:
[2025-10-11 09:54:57] -rw-------. 1 boincer umatlas 203363189 Oct 11 09:52 shared/HITS.pool.root.1
[2025-10-11 09:54:57]  *** Contents of shared directory: ***
[2025-10-11 09:54:57] total 416748
[2025-10-11 09:54:57] -rw-r--r--. 2 boincer umatlas 221485247 Oct 11 07:49 ATLAS.root_0
[2025-10-11 09:54:57] -rw-r--r--. 2 boincer umatlas    569676 Oct 11 07:49 input.tar.gz
[2025-10-11 09:54:57] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 07:49 start_atlas.sh
[2025-10-11 09:54:57] -rw-------. 1 boincer umatlas 203363189 Oct 11 09:52 HITS.pool.root.1
[2025-10-11 09:54:57] -rw-------. 1 boincer umatlas   1300480 Oct 11 09:54 result.tar.gz
09:54:58 (3616315): run_atlas exited; CPU time 24338.279532
09:54:58 (3616315): called boinc_finish(0)

</stderr_txt>
]]>

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