Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:51:45 (1021791): wrapper (7.7.26015): starting
06:51:45 (1021791): wrapper: running run_atlas (--nthreads 11)
[2025-10-11 06:51:45] Arguments: --nthreads 11
[2025-10-11 06:51:45] Threads: 11
[2025-10-11 06:51:45] Checking for CVMFS
[2025-10-11 06:51:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 06:51:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 06:51:45] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 06:51:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 06:51:45] 2.13.2.0 3683012 11251 135216 151581 3 196 35761192 40960001 10821 16776704 0 118642581 99.830 55018707 32594 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 06:51:45] CVMFS is ok
[2025-10-11 06:51:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 06:51:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 06:51:45] Further information can be found at the LHC@home message board.
[2025-10-11 06:51:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 06:51:45] Checking for apptainer binary...
[2025-10-11 06:51:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 06:51:45] Running /usr/bin/apptainer --version
[2025-10-11 06:51:45] apptainer version 1.4.3-1.el9
[2025-10-11 06:51:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 06:51:45] c8-7-4.aglt2.org
[2025-10-11 06:51:45] apptainer works
[2025-10-11 06:51:45] Set ATHENA_PROC_NUMBER=11
[2025-10-11 06:51:45] Set ATHENA_CORE_NUMBER=11
[2025-10-11 06:51:45] Starting ATLAS job with PandaID=6837355711
[2025-10-11 06:51:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 07:29:04]  *** The last 200 lines of the pilot log: ***
[2025-10-11 07:29:04]  replicas=None
[2025-10-11 07:29:04]  scope=mc23_13p6TeV
[2025-10-11 07:29:04]  status=None
[2025-10-11 07:29:04]  status_code=0
[2025-10-11 07:29:04]  storage_token=
[2025-10-11 07:29:04]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6837355711/log.46676269._023846.job.log.tgz.1
[2025-10-11 07:29:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1e/7b/log.46676269._023846.job.log.tgz.1
[2025-10-11 07:29:04]  workdir=None
[2025-10-11 07:29:04] ]
[2025-10-11 07:29:04] 2025-10-11 11:28:24,650 | INFO     | transferring file log.46676269._023846.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6837355711/log.46676269._023846.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-11 07:29:04] 2025-10-11 11:28:24,651 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6837355711/log.46676269._023846.job.log.tgz.1 /tmp/boinchome/slots/2/log.46676269._023846.job
[2025-10-11 07:29:04] 2025-10-11 11:28:24,665 | INFO     | adding to output.list: log.46676269._023846.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1e/7b/log.46676269._023846.job.log.tg
[2025-10-11 07:29:04] 2025-10-11 11:28:24,666 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 07:29:04] 2025-10-11 11:28:24,666 | INFO     | summary of transferred files:
[2025-10-11 07:29:04] 2025-10-11 11:28:24,666 | INFO     |  -- lfn=log.46676269._023846.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 07:29:04] 2025-10-11 11:28:24,666 | INFO     | stage-out finished correctly
[2025-10-11 07:29:04] 2025-10-11 11:28:25,761 | INFO     | monitor loop #164: job 0:6837355711 is in state 'finished'
[2025-10-11 07:29:04] 2025-10-11 11:28:25,761 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 07:29:04] 2025-10-11 11:28:25,891 | INFO     | time since job start (2191s) is within the limit (172800.0s)
[2025-10-11 07:29:04] 2025-10-11 11:28:26,267 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 07:29:04] 2025-10-11 11:28:27,896 | INFO     | time since job start (2193s) is within the limit (172800.0s)
[2025-10-11 07:29:04] 2025-10-11 11:28:28,264 | INFO     | monitor loop #165: job 0:6837355711 is in state 'finished'
[2025-10-11 07:29:04] 2025-10-11 11:28:28,264 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 07:29:04] 2025-10-11 11:28:28,705 | INFO     | job 6837355711 has state=finished
[2025-10-11 07:29:04] 2025-10-11 11:28:28,705 | INFO     | preparing for final server update for job 6837355711 in state='finished'
[2025-10-11 07:29:04] 2025-10-11 11:28:28,706 | INFO     | this job has now completed (state=finished)
[2025-10-11 07:29:04] 2025-10-11 11:28:28,706 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 07:29:04] 2025-10-11 11:28:28,706 | INFO     | log transfer has been attempted: DONE
[2025-10-11 07:29:04] 2025-10-11 11:28:28,706 | INFO     | job 6837355711 has finished - writing final server update
[2025-10-11 07:29:04] 2025-10-11 11:28:28,706 | INFO     | total number of processed events: 400 (read)
[2025-10-11 07:29:04] 2025-10-11 11:28:28,706 | INFO     | executing command: lscpu
[2025-10-11 07:29:04] 2025-10-11 11:28:28,760 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 07:29:04] 2025-10-11 11:28:29,902 | INFO     | time since job start (2195s) is within the limit (172800.0s)
[2025-10-11 07:29:04] 2025-10-11 11:28:30,766 | INFO     | monitor loop #166: job 0:6837355711 is in state 'finished'
[2025-10-11 07:29:04] 2025-10-11 11:28:30,766 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 07:29:04] 2025-10-11 11:28:31,555 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-11 07:29:04] 2025-10-11 11:28:31,571 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3499.3751484374934
[2025-10-11 07:29:04] 2025-10-11 11:28:31,579 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6837355711/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 07:29:04] 2025-10-11 11:28:31,580 | INFO     | extracted standard info from prmon json
[2025-10-11 07:29:04] 2025-10-11 11:28:31,580 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 07:29:04] 2025-10-11 11:28:31,580 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 07:29:04] 2025-10-11 11:28:31,580 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 07:29:04] 2025-10-11 11:28:31,580 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 07:29:04] 2025-10-11 11:28:31,580 | INFO     | fitting pss+swap vs Time
[2025-10-11 07:29:04] 2025-10-11 11:28:31,580 | INFO     | sum of square deviations: 7553630.0
[2025-10-11 07:29:04] 2025-10-11 11:28:31,581 | INFO     | sum of deviations: -10837930.99999997
[2025-10-11 07:29:04] 2025-10-11 11:28:31,581 | INFO     | mean x: 1760181096.0
[2025-10-11 07:29:04] 2025-10-11 11:28:31,581 | INFO     | mean y: 2320614.9655172415
[2025-10-11 07:29:04] 2025-10-11 11:28:31,581 | INFO     | -- intersect: 2527824414.589317
[2025-10-11 07:29:04] 2025-10-11 11:28:31,581 | INFO     | intersect: 2527824414.589317
[2025-10-11 07:29:04] 2025-10-11 11:28:31,581 | INFO     | chi2: 0.002501827720685569
[2025-10-11 07:29:04] 2025-10-11 11:28:31,581 | INFO     | -- intersect: 2527824414.589317
[2025-10-11 07:29:04] 2025-10-11 11:28:31,581 | INFO     | current memory leak: -1.43 B/s (using 29 data points, chi2=0.00)
[2025-10-11 07:29:04] 2025-10-11 11:28:31,581 | INFO     | could have reported an average CPU frequency of 3597 MHz (5 samples)
[2025-10-11 07:29:04] 2025-10-11 11:28:31,581 | INFO     | ..............................
[2025-10-11 07:29:04] 2025-10-11 11:28:31,581 | INFO     | . Timing measurements:
[2025-10-11 07:29:04] 2025-10-11 11:28:31,581 | INFO     | . get job = 0 s
[2025-10-11 07:29:04] 2025-10-11 11:28:31,581 | INFO     | . initial setup = 2 s
[2025-10-11 07:29:04] 2025-10-11 11:28:31,581 | INFO     | . payload setup = 4 s
[2025-10-11 07:29:04] 2025-10-11 11:28:31,581 | INFO     | . stage-in = 0 s
[2025-10-11 07:29:04] 2025-10-11 11:28:31,581 | INFO     | . payload execution = 2167 s
[2025-10-11 07:29:04] 2025-10-11 11:28:31,581 | INFO     | . stage-out = 0 s
[2025-10-11 07:29:04] 2025-10-11 11:28:31,581 | INFO     | . log creation = 0 s
[2025-10-11 07:29:04] 2025-10-11 11:28:31,581 | INFO     | ..............................
[2025-10-11 07:29:04] 2025-10-11 11:28:31,611 | INFO     | 
[2025-10-11 07:29:04] 2025-10-11 11:28:31,611 | INFO     | job summary report
[2025-10-11 07:29:04] 2025-10-11 11:28:31,611 | INFO     | --------------------------------------------------
[2025-10-11 07:29:04] 2025-10-11 11:28:31,612 | INFO     | PanDA job id: 6837355711
[2025-10-11 07:29:04] 2025-10-11 11:28:31,612 | INFO     | task id: 46676269
[2025-10-11 07:29:04] 2025-10-11 11:28:31,612 | INFO     | errors: (none)
[2025-10-11 07:29:04] 2025-10-11 11:28:31,612 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 07:29:04] 2025-10-11 11:28:31,612 | INFO     | pilot state: finished 
[2025-10-11 07:29:04] 2025-10-11 11:28:31,612 | INFO     | transexitcode: 0
[2025-10-11 07:29:04] 2025-10-11 11:28:31,612 | INFO     | exeerrorcode: 0
[2025-10-11 07:29:04] 2025-10-11 11:28:31,612 | INFO     | exeerrordiag: 
[2025-10-11 07:29:04] 2025-10-11 11:28:31,612 | INFO     | exitcode: 0
[2025-10-11 07:29:04] 2025-10-11 11:28:31,612 | INFO     | exitmsg: OK
[2025-10-11 07:29:04] 2025-10-11 11:28:31,612 | INFO     | cpuconsumptiontime: 21445 s
[2025-10-11 07:29:04] 2025-10-11 11:28:31,612 | INFO     | nevents: 400
[2025-10-11 07:29:04] 2025-10-11 11:28:31,612 | INFO     | neventsw: 0
[2025-10-11 07:29:04] 2025-10-11 11:28:31,612 | INFO     | pid: 1042621
[2025-10-11 07:29:04] 2025-10-11 11:28:31,612 | INFO     | pgrp: 1042621
[2025-10-11 07:29:04] 2025-10-11 11:28:31,612 | INFO     | corecount: 11
[2025-10-11 07:29:04] 2025-10-11 11:28:31,612 | INFO     | event service: False
[2025-10-11 07:29:04] 2025-10-11 11:28:31,612 | INFO     | sizes: {0: 2348855, 3: 2349117, 11: 2349145, 2175: 2374267, 2176: 2383265, 2177: 2383321, 2183: 2383675}
[2025-10-11 07:29:04] 2025-10-11 11:28:31,612 | INFO     | --------------------------------------------------
[2025-10-11 07:29:04] 2025-10-11 11:28:31,612 | INFO     | 
[2025-10-11 07:29:04] 2025-10-11 11:28:31,612 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-11 07:29:04] 2025-10-11 11:28:31,625 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 07:29:04] 2025-10-11 11:28:31,625 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 07:29:04] 2025-10-11 11:28:31,625 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 07:29:04] 2025-10-11 11:28:31,625 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 07:29:04] 2025-10-11 11:28:31,625 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 07:29:04] 2025-10-11 11:28:31,625 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 07:29:04] 2025-10-11 11:28:31,625 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 07:29:04] 2025-10-11 11:28:31,626 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 07:29:04] 2025-10-11 11:28:31,626 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 07:29:04] 2025-10-11 11:28:31,626 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 07:29:04] 2025-10-11 11:28:31,626 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 07:29:04] 2025-10-11 11:28:31,626 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 07:29:04] 2025-10-11 11:28:31,626 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 07:29:04] 2025-10-11 11:28:31,626 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 07:29:04] 2025-10-11 11:28:31,626 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 07:29:04] 2025-10-11 11:28:31,626 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 07:29:04] 2025-10-11 11:28:31,626 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 07:29:04] 2025-10-11 11:28:31,626 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 07:29:04] 2025-10-11 11:28:31,626 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 07:29:04] 2025-10-11 11:28:31,626 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 07:29:04] 2025-10-11 11:28:31,626 | INFO     | job 6837355711 has completed (purged errors)
[2025-10-11 07:29:04] 2025-10-11 11:28:31,626 | INFO     | overall cleanup function is called
[2025-10-11 07:29:04] 2025-10-11 11:28:32,629 | INFO     | --- collectZombieJob: --- 10, [1042621]
[2025-10-11 07:29:04] 2025-10-11 11:28:32,629 | INFO     | zombie collector waiting for pid 1042621
[2025-10-11 07:29:04] 2025-10-11 11:28:32,629 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 07:29:04] 2025-10-11 11:28:32,629 | INFO     | collected zombie processes
[2025-10-11 07:29:04] 2025-10-11 11:28:32,629 | INFO     | will attempt to kill all subprocesses of pid=1042621
[2025-10-11 07:29:04] 2025-10-11 11:28:32,852 | INFO     | process IDs to be killed: [1042621] (in reverse order)
[2025-10-11 07:29:04] 2025-10-11 11:28:32,956 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 07:29:04] 2025-10-11 11:28:32,956 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 07:29:04] 2025-10-11 11:28:32,970 | INFO     | did not find any defunct processes belonging to 1042621
[2025-10-11 07:29:04] 2025-10-11 11:28:32,982 | INFO     | did not find any defunct processes belonging to 1042621
[2025-10-11 07:29:04] 2025-10-11 11:28:32,982 | INFO     | ready for new job
[2025-10-11 07:29:04] 2025-10-11 11:28:32,983 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 07:29:04] 2025-10-11 11:28:32,983 | INFO     | ***************************************
[2025-10-11 07:29:04] 2025-10-11 11:28:32,983 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 07:29:04] 2025-10-11 11:28:32,983 | INFO     | ***************************************
[2025-10-11 07:29:04] 2025-10-11 11:28:32,983 | INFO     | 
[2025-10-11 07:29:04] 2025-10-11 11:28:32,999 | INFO     | architecture information:
[2025-10-11 07:29:04] 2025-10-11 11:28:32,999 | INFO     | executing command: cat /etc/os-release
[2025-10-11 07:29:04] 2025-10-11 11:28:33,011 | INFO     | cat /etc/os-release:
[2025-10-11 07:29:04] NAME="CentOS Linux"
[2025-10-11 07:29:04] VERSION="7 (Core)"
[2025-10-11 07:29:04] ID="centos"
[2025-10-11 07:29:04] ID_LIKE="rhel fedora"
[2025-10-11 07:29:04] VERSION_ID="7"
[2025-10-11 07:29:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 07:29:04] ANSI_COLOR="0;31"
[2025-10-11 07:29:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 07:29:04] HOME_URL="https://www.centos.org/"
[2025-10-11 07:29:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 07:29:04] 
[2025-10-11 07:29:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 07:29:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 07:29:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 07:29:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 07:29:04] 
[2025-10-11 07:29:04] 2025-10-11 11:28:33,011 | INFO     | ***************************************
[2025-10-11 07:29:04] 2025-10-11 11:28:33,513 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-11 07:29:04] 2025-10-11 11:28:33,527 | INFO     | sufficient remaining disk space (167839268864 B)
[2025-10-11 07:29:04] 2025-10-11 11:28:33,528 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 07:29:04] 2025-10-11 11:28:33,528 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 07:29:04] 2025-10-11 11:28:33,528 | INFO     | update_server=False
[2025-10-11 07:29:04] 2025-10-11 11:28:33,528 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 07:29:04] 2025-10-11 11:28:33,528 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 07:29:04] 2025-10-11 11:28:33,528 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 07:29:04] 2025-10-11 11:28:33,606 | INFO     | all payload control threads have been joined
[2025-10-11 07:29:04] 2025-10-11 11:28:33,633 | INFO     | all data control threads have been joined
[2025-10-11 07:29:04] 2025-10-11 11:28:34,274 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 07:29:04] 2025-10-11 11:28:34,274 | INFO     | aborting loop
[2025-10-11 07:29:04] 2025-10-11 11:28:34,532 | INFO     | [job] retrieve thread has finished
[2025-10-11 07:29:04] 2025-10-11 11:28:34,534 | INFO     | [job] queue monitor thread has finished
[2025-10-11 07:29:04] 2025-10-11 11:28:34,610 | INFO     | [payload] control thread has finished
[2025-10-11 07:29:04] 2025-10-11 11:28:34,634 | INFO     | [data] control thread has finished
[2025-10-11 07:29:04] 2025-10-11 11:28:34,903 | INFO     | [payload] validate_post thread has finished
[2025-10-11 07:29:04] 2025-10-11 11:28:35,047 | INFO     | all job control threads have been joined
[2025-10-11 07:29:04] 2025-10-11 11:28:35,067 | INFO     | [job] validate thread has finished
[2025-10-11 07:29:04] 2025-10-11 11:28:35,147 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 07:29:04] 2025-10-11 11:28:35,198 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 07:29:04] 2025-10-11 11:28:35,229 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 07:29:04] 2025-10-11 11:28:35,279 | INFO     | [job] job monitor thread has finished
[2025-10-11 07:29:04] 2025-10-11 11:28:35,533 | INFO     | [data] copytool_out thread has finished
[2025-10-11 07:29:04] 2025-10-11 11:28:35,656 | INFO     | [data] copytool_in thread has finished
[2025-10-11 07:29:04] 2025-10-11 11:28:35,850 | INFO     | [payload] failed_post thread has finished
[2025-10-11 07:29:04] 2025-10-11 11:28:36,053 | INFO     | [job] control thread has finished
[2025-10-11 07:29:04] 2025-10-11 11:28:36,803 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 07:29:04] 2025-10-11 11:28:40,809 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 07:29:04] 2025-10-11 11:28:44,175 | INFO     | job.realtimelogging is not enabled
[2025-10-11 07:29:04] 2025-10-11 11:28:45,181 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 07:29:04] 2025-10-11 11:28:57,615 | INFO     | [monitor] cgroup control has ended
[2025-10-11 07:29:04] 2025-10-11 11:28:58,868 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140699957663552)>', '<ExcThread(monitor, started 140699605382912)>']
[2025-10-11 07:29:04] 2025-10-11 11:29:03,281 | INFO     | PID=1026271 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 07:29:04] 2025-10-11 11:29:03,281 | INFO     | .. there are 14 such processes running
[2025-10-11 07:29:04] 2025-10-11 11:29:03,282 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 07:29:04] 2025-10-11 11:29:03,282 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 07:29:04] 2025-10-11 11:29:03,282 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 07:29:04] 2025-10-11 11:29:03,282 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 07:29:04] 2025-10-11 11:29:03,282 | INFO     | [monitor] control thread has ended
[2025-10-11 07:29:04] 2025-10-11 11:29:03,893 | INFO     | all workflow threads have been joined
[2025-10-11 07:29:04] 2025-10-11 11:29:03,894 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 07:29:04] 2025-10-11 11:29:03,894 | INFO     | traces error code: 0
[2025-10-11 07:29:04] 2025-10-11 11:29:03,894 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 07:29:04] 2025-10-11 11:29:03,971 [wrapper] ==== pilot stdout END ====
[2025-10-11 07:29:04] 2025-10-11 11:29:03,973 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 07:29:04] 2025-10-11 11:29:03,975 [wrapper] pilotpid: 1026271
[2025-10-11 07:29:04] 2025-10-11 11:29:03,976 [wrapper] Pilot exit status: 0
[2025-10-11 07:29:04] 2025-10-11 11:29:03,982 [wrapper] pandaids: 6837355711
[2025-10-11 07:29:04] 2025-10-11 11:29:04,052 [wrapper] cleanup supervisor_pilot 1155003 1026273
[2025-10-11 07:29:04] 2025-10-11 11:29:04,054 [wrapper] Test setup, not cleaning
[2025-10-11 07:29:04] 2025-10-11 11:29:04,056 [wrapper] apfmon messages muted
[2025-10-11 07:29:04] 2025-10-11 11:29:04,058 [wrapper] ==== wrapper stdout END ====
[2025-10-11 07:29:04] 2025-10-11 11:29:04,059 [wrapper] ==== wrapper stderr END ====
[2025-10-11 07:29:04]  *** Error codes and diagnostics ***
[2025-10-11 07:29:04]     "exeErrorCode": 0,
[2025-10-11 07:29:04]     "exeErrorDiag": "",
[2025-10-11 07:29:04]     "pilotErrorCode": 0,
[2025-10-11 07:29:04]     "pilotErrorDiag": "",
[2025-10-11 07:29:04]  *** Listing of results directory ***
[2025-10-11 07:29:04] total 409624
[2025-10-11 07:29:04] -rw-r--r--. 1 boincer umatlas    557409 Oct  9 13:41 pilot3.tar.gz
[2025-10-11 07:29:04] -rwx------. 1 boincer umatlas     36292 Oct  9 13:54 runpilot2-wrapper.sh
[2025-10-11 07:29:04] -rw-r--r--. 1 boincer umatlas      5112 Oct  9 13:54 queuedata.json
[2025-10-11 07:29:04] -rw-r--r--. 1 boincer umatlas       100 Oct 11 06:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 07:29:04] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 06:51 run_atlas
[2025-10-11 07:29:04] -rw-r--r--. 1 boincer umatlas       105 Oct 11 06:51 job.xml
[2025-10-11 07:29:04] -rw-r--r--. 2 boincer umatlas 217911684 Oct 11 06:51 EVNT.46676267._000978.pool.root.1
[2025-10-11 07:29:04] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 06:51 start_atlas.sh
[2025-10-11 07:29:04] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 06:51 shared
[2025-10-11 07:29:04] -rw-r--r--. 2 boincer umatlas    569677 Oct 11 06:51 input.tar.gz
[2025-10-11 07:29:04] -rw-r--r--. 1 boincer umatlas         0 Oct 11 06:51 boinc_lockfile
[2025-10-11 07:29:04] -rw-r--r--. 1 boincer umatlas      2549 Oct 11 06:51 pandaJob.out
[2025-10-11 07:29:04] -rw-------. 1 boincer umatlas    975517 Oct 11 06:51 agis_schedconf.cvmfs.json
[2025-10-11 07:29:04] -rw-------. 1 boincer umatlas   1560580 Oct 11 06:51 agis_ddmendpoints.agis.ALL.json
[2025-10-11 07:29:04] drwx------. 5 boincer umatlas      4096 Oct 11 06:51 pilot3
[2025-10-11 07:29:04] -rw-r--r--. 1 boincer umatlas      7163 Oct 11 07:19 init_data.xml
[2025-10-11 07:29:04] -rw-r--r--. 1 boincer umatlas       529 Oct 11 07:28 boinc_task_state.xml
[2025-10-11 07:29:04] -rw-------. 1 boincer umatlas 196250285 Oct 11 07:28 HITS.46676269._023846.pool.root.1
[2025-10-11 07:29:04] -rw-------. 1 boincer umatlas      1028 Oct 11 07:28 memory_monitor_summary.json
[2025-10-11 07:29:04] -rw-------. 1 boincer umatlas    341432 Oct 11 07:28 log.46676269._023846.job.log.tgz.1
[2025-10-11 07:29:04] -rw-------. 1 boincer umatlas      7766 Oct 11 07:28 heartbeat.json
[2025-10-11 07:29:04] -rw-r--r--. 1 boincer umatlas        27 Oct 11 07:29 wrapper_checkpoint.txt
[2025-10-11 07:29:04] -rw-------. 1 boincer umatlas        95 Oct 11 07:29 pilot_heartbeat.json
[2025-10-11 07:29:04] -rw-------. 1 boincer umatlas      4897 Oct 11 07:29 pilotlog.txt
[2025-10-11 07:29:04] -rw-------. 1 boincer umatlas    351971 Oct 11 07:29 log.46676269._023846.job.log.1
[2025-10-11 07:29:04] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 07:29 boinc_mmap_file
[2025-10-11 07:29:04] -rw-------. 1 boincer umatlas       357 Oct 11 07:29 output.list
[2025-10-11 07:29:04] -rw-r--r--. 1 boincer umatlas       620 Oct 11 07:29 runtime_log
[2025-10-11 07:29:04] -rw-------. 1 boincer umatlas    716800 Oct 11 07:29 result.tar.gz
[2025-10-11 07:29:04] -rw-------. 1 boincer umatlas       649 Oct 11 07:29 xhYLDmc19Q8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqxaNDmw8Z5No.diag
[2025-10-11 07:29:04] -rw-r--r--. 1 boincer umatlas      8695 Oct 11 07:29 runtime_log.err
[2025-10-11 07:29:04] -rw-r--r--. 1 boincer umatlas     21774 Oct 11 07:29 stderr.txt
[2025-10-11 07:29:04] HITS file was successfully produced:
[2025-10-11 07:29:04] -rw-------. 1 boincer umatlas 196250285 Oct 11 07:28 shared/HITS.pool.root.1
[2025-10-11 07:29:04]  *** Contents of shared directory: ***
[2025-10-11 07:29:04] total 405740
[2025-10-11 07:29:04] -rw-r--r--. 2 boincer umatlas 217911684 Oct 11 06:51 ATLAS.root_0
[2025-10-11 07:29:04] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 06:51 start_atlas.sh
[2025-10-11 07:29:04] -rw-r--r--. 2 boincer umatlas    569677 Oct 11 06:51 input.tar.gz
[2025-10-11 07:29:04] -rw-------. 1 boincer umatlas 196250285 Oct 11 07:28 HITS.pool.root.1
[2025-10-11 07:29:04] -rw-------. 1 boincer umatlas    716800 Oct 11 07:29 result.tar.gz
07:29:06 (1021791): run_atlas exited; CPU time 21495.221204
07:29:06 (1021791): called boinc_finish(0)

</stderr_txt>
]]>

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