Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:34:04 (2574419): wrapper (7.7.26015): starting
19:34:04 (2574419): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 19:34:04] Arguments: --nthreads 8
[2025-10-11 19:34:04] Threads: 8
[2025-10-11 19:34:04] Checking for CVMFS
[2025-10-11 19:34:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 19:34:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 19:34:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 19:34:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 19:34:04] 2.13.2.0 1338992 3296 60716 151591 3 57 2950431 4097024 0 130560 0 3388714 99.993 113345 26519 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-10-11 19:34:04] CVMFS is ok
[2025-10-11 19:34:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 19:34:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 19:34:04] Further information can be found at the LHC@home message board.
[2025-10-11 19:34:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 19:34:04] Checking for apptainer binary...
[2025-10-11 19:34:04] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-10-11 19:34:04] apptainer is not installed, using version from CVMFS
[2025-10-11 19:34:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 19:34:04] pckeatlas02
[2025-10-11 19:34:04] apptainer works
[2025-10-11 19:34:04] Set ATHENA_PROC_NUMBER=8
[2025-10-11 19:34:04] Set ATHENA_CORE_NUMBER=8
[2025-10-11 19:34:04] Starting ATLAS job with PandaID=6827430801
[2025-10-11 19:34:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 20:42:19]  *** The last 200 lines of the pilot log: ***
[2025-10-11 20:42:19]  storage_token=
[2025-10-11 20:42:19]  surl=/var/lib/boinc/slots/19/PanDA_Pilot-6827430801/log.46376905._030624.job.log.tgz.1
[2025-10-11 20:42:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/49/62/log.46376905._030624.job.log.tgz.1
[2025-10-11 20:42:19]  workdir=None
[2025-10-11 20:42:19] ]
[2025-10-11 20:42:19] 2025-10-11 18:41:38,376 | INFO     | transferring file log.46376905._030624.job.log.tgz.1 from /var/lib/boinc/slots/19/PanDA_Pilot-6827430801/log.46376905._030624.job.log.tgz.1 to /var/lib/boinc/slots
[2025-10-11 20:42:19] 2025-10-11 18:41:38,377 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/19/PanDA_Pilot-6827430801/log.46376905._030624.job.log.tgz.1 /var/lib/boinc/slots/19/log.46376905._030624.j
[2025-10-11 20:42:19] 2025-10-11 18:41:38,386 | INFO     | adding to output.list: log.46376905._030624.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/49/62/log.46376905._030624.job.log.tg
[2025-10-11 20:42:19] 2025-10-11 18:41:38,386 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 20:42:19] 2025-10-11 18:41:38,386 | INFO     | summary of transferred files:
[2025-10-11 20:42:19] 2025-10-11 18:41:38,386 | INFO     |  -- lfn=log.46376905._030624.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 20:42:19] 2025-10-11 18:41:38,386 | INFO     | stage-out finished correctly
[2025-10-11 20:42:19] 2025-10-11 18:41:38,422 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 20:42:19] 2025-10-11 18:41:39,275 | INFO     | PID=2578164 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 20:42:19] 2025-10-11 18:41:39,971 | INFO     | job 6827430801 has state=finished
[2025-10-11 20:42:19] 2025-10-11 18:41:39,971 | INFO     | preparing for final server update for job 6827430801 in state='finished'
[2025-10-11 20:42:19] 2025-10-11 18:41:39,971 | INFO     | this job has now completed (state=finished)
[2025-10-11 20:42:19] 2025-10-11 18:41:39,971 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 20:42:19] 2025-10-11 18:41:39,971 | INFO     | log transfer has been attempted: DONE
[2025-10-11 20:42:19] 2025-10-11 18:41:39,971 | INFO     | job 6827430801 has finished - writing final server update
[2025-10-11 20:42:19] 2025-10-11 18:41:39,971 | INFO     | total number of processed events: 400 (read)
[2025-10-11 20:42:19] 2025-10-11 18:41:39,972 | INFO     | executing command: lscpu
[2025-10-11 20:42:19] 2025-10-11 18:41:39,980 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 20:42:19] 2025-10-11 18:41:40,275 | INFO     | time since job start (4052s) is within the limit (172800.0s)
[2025-10-11 20:42:19] 2025-10-11 18:41:42,280 | INFO     | time since job start (4054s) is within the limit (172800.0s)
[2025-10-11 20:42:19] 2025-10-11 18:41:42,588 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 20:42:19] 2025-10-11 18:41:42,589 | INFO     | found 4 cores (4 cores per socket, 1 socket) HT, CPU MHz: 3828.83275
[2025-10-11 20:42:19] 2025-10-11 18:41:42,590 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-6827430801/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 20:42:19] 2025-10-11 18:41:42,590 | INFO     | extracted standard info from prmon json
[2025-10-11 20:42:19] 2025-10-11 18:41:42,590 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 20:42:19] 2025-10-11 18:41:42,590 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 20:42:19] 2025-10-11 18:41:42,590 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 20:42:19] 2025-10-11 18:41:42,590 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 20:42:19] 2025-10-11 18:41:42,591 | INFO     | fitting pss+swap vs Time
[2025-10-11 20:42:19] 2025-10-11 18:41:42,591 | INFO     | sum of square deviations: 66959395.0
[2025-10-11 20:42:19] 2025-10-11 18:41:42,591 | INFO     | sum of deviations: -10516212150.500004
[2025-10-11 20:42:19] 2025-10-11 18:41:42,591 | INFO     | mean x: 1760206171.5
[2025-10-11 20:42:19] 2025-10-11 18:41:42,591 | INFO     | mean y: 2728042.6166666667
[2025-10-11 20:42:19] 2025-10-11 18:41:42,591 | INFO     | -- intersect: 276449394385.9041
[2025-10-11 20:42:19] 2025-10-11 18:41:42,591 | INFO     | intersect: 276449394385.9041
[2025-10-11 20:42:19] 2025-10-11 18:41:42,592 | INFO     | chi2: 0.09297910765180911
[2025-10-11 20:42:19] 2025-10-11 18:41:42,592 | INFO     | -- intersect: 276449394385.9041
[2025-10-11 20:42:19] 2025-10-11 18:41:42,592 | INFO     | current memory leak: -157.05 B/s (using 60 data points, chi2=0.09)
[2025-10-11 20:42:19] 2025-10-11 18:41:42,592 | INFO     | could have reported an average CPU frequency of 3761 MHz (6 samples)
[2025-10-11 20:42:19] 2025-10-11 18:41:42,592 | INFO     | ..............................
[2025-10-11 20:42:19] 2025-10-11 18:41:42,592 | INFO     | . Timing measurements:
[2025-10-11 20:42:19] 2025-10-11 18:41:42,592 | INFO     | . get job = 0 s
[2025-10-11 20:42:19] 2025-10-11 18:41:42,592 | INFO     | . initial setup = 0 s
[2025-10-11 20:42:19] 2025-10-11 18:41:42,592 | INFO     | . payload setup = 3 s
[2025-10-11 20:42:19] 2025-10-11 18:41:42,592 | INFO     | . stage-in = 0 s
[2025-10-11 20:42:19] 2025-10-11 18:41:42,592 | INFO     | . payload execution = 4030 s
[2025-10-11 20:42:19] 2025-10-11 18:41:42,592 | INFO     | . stage-out = 0 s
[2025-10-11 20:42:19] 2025-10-11 18:41:42,592 | INFO     | . log creation = 0 s
[2025-10-11 20:42:19] 2025-10-11 18:41:42,592 | INFO     | ..............................
[2025-10-11 20:42:19] 2025-10-11 18:41:42,688 | INFO     | 
[2025-10-11 20:42:19] 2025-10-11 18:41:42,688 | INFO     | job summary report
[2025-10-11 20:42:19] 2025-10-11 18:41:42,688 | INFO     | --------------------------------------------------
[2025-10-11 20:42:19] 2025-10-11 18:41:42,688 | INFO     | PanDA job id: 6827430801
[2025-10-11 20:42:19] 2025-10-11 18:41:42,688 | INFO     | task id: 46376905
[2025-10-11 20:42:19] 2025-10-11 18:41:42,688 | INFO     | errors: (none)
[2025-10-11 20:42:19] 2025-10-11 18:41:42,688 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 20:42:19] 2025-10-11 18:41:42,688 | INFO     | pilot state: finished 
[2025-10-11 20:42:19] 2025-10-11 18:41:42,688 | INFO     | transexitcode: 0
[2025-10-11 20:42:19] 2025-10-11 18:41:42,688 | INFO     | exeerrorcode: 0
[2025-10-11 20:42:19] 2025-10-11 18:41:42,689 | INFO     | exeerrordiag: 
[2025-10-11 20:42:19] 2025-10-11 18:41:42,689 | INFO     | exitcode: 0
[2025-10-11 20:42:19] 2025-10-11 18:41:42,689 | INFO     | exitmsg: OK
[2025-10-11 20:42:19] 2025-10-11 18:41:42,689 | INFO     | cpuconsumptiontime: 30404 s
[2025-10-11 20:42:19] 2025-10-11 18:41:42,689 | INFO     | nevents: 400
[2025-10-11 20:42:19] 2025-10-11 18:41:42,689 | INFO     | neventsw: 0
[2025-10-11 20:42:19] 2025-10-11 18:41:42,689 | INFO     | pid: 2585484
[2025-10-11 20:42:19] 2025-10-11 18:41:42,689 | INFO     | pgrp: 2585484
[2025-10-11 20:42:19] 2025-10-11 18:41:42,689 | INFO     | corecount: 8
[2025-10-11 20:42:19] 2025-10-11 18:41:42,689 | INFO     | event service: False
[2025-10-11 20:42:19] 2025-10-11 18:41:42,689 | INFO     | sizes: {0: 2348815, 2: 2349077, 11: 2349105, 4036: 2375065, 4037: 2384121, 4041: 2384259}
[2025-10-11 20:42:19] 2025-10-11 18:41:42,689 | INFO     | --------------------------------------------------
[2025-10-11 20:42:19] 2025-10-11 18:41:42,689 | INFO     | 
[2025-10-11 20:42:19] 2025-10-11 18:41:42,689 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2025-10-11 20:42:19] 2025-10-11 18:41:42,696 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 20:42:19] 2025-10-11 18:41:42,697 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 20:42:19] 2025-10-11 18:41:42,697 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 20:42:19] 2025-10-11 18:41:42,697 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 20:42:19] 2025-10-11 18:41:42,697 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 20:42:19] 2025-10-11 18:41:42,697 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 20:42:19] 2025-10-11 18:41:42,697 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 20:42:19] 2025-10-11 18:41:42,697 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 20:42:19] 2025-10-11 18:41:42,697 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 20:42:19] 2025-10-11 18:41:42,697 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 20:42:19] 2025-10-11 18:41:42,697 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 20:42:19] 2025-10-11 18:41:42,697 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 20:42:19] 2025-10-11 18:41:42,697 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 20:42:19] 2025-10-11 18:41:42,697 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 20:42:19] 2025-10-11 18:41:42,697 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 20:42:19] 2025-10-11 18:41:42,697 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 20:42:19] 2025-10-11 18:41:42,697 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 20:42:19] 2025-10-11 18:41:42,697 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 20:42:19] 2025-10-11 18:41:42,697 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 20:42:19] 2025-10-11 18:41:42,697 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 20:42:19] 2025-10-11 18:41:42,697 | INFO     | job 6827430801 has completed (purged errors)
[2025-10-11 20:42:19] 2025-10-11 18:41:42,697 | INFO     | overall cleanup function is called
[2025-10-11 20:42:19] 2025-10-11 18:41:43,703 | INFO     | --- collectZombieJob: --- 10, [2585484]
[2025-10-11 20:42:19] 2025-10-11 18:41:43,704 | INFO     | zombie collector waiting for pid 2585484
[2025-10-11 20:42:19] 2025-10-11 18:41:43,704 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 20:42:19] 2025-10-11 18:41:43,704 | INFO     | collected zombie processes
[2025-10-11 20:42:19] 2025-10-11 18:41:43,704 | INFO     | will attempt to kill all subprocesses of pid=2585484
[2025-10-11 20:42:19] 2025-10-11 18:41:43,737 | INFO     | process IDs to be killed: [2585484] (in reverse order)
[2025-10-11 20:42:19] 2025-10-11 18:41:43,752 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 20:42:19] 2025-10-11 18:41:43,752 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 20:42:19] 2025-10-11 18:41:43,755 | INFO     | did not find any defunct processes belonging to 2585484
[2025-10-11 20:42:19] 2025-10-11 18:41:43,757 | INFO     | did not find any defunct processes belonging to 2585484
[2025-10-11 20:42:19] 2025-10-11 18:41:43,758 | INFO     | ready for new job
[2025-10-11 20:42:19] 2025-10-11 18:41:43,758 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 20:42:19] 2025-10-11 18:41:43,758 | INFO     | ***************************************
[2025-10-11 20:42:19] 2025-10-11 18:41:43,759 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-11 20:42:19] 2025-10-11 18:41:43,759 | INFO     | ***************************************
[2025-10-11 20:42:19] 2025-10-11 18:41:43,759 | INFO     | 
[2025-10-11 20:42:19] 2025-10-11 18:41:43,759 | INFO     | architecture information:
[2025-10-11 20:42:19] 2025-10-11 18:41:43,759 | INFO     | executing command: cat /etc/os-release
[2025-10-11 20:42:19] 2025-10-11 18:41:43,765 | INFO     | cat /etc/os-release:
[2025-10-11 20:42:19] NAME="CentOS Linux"
[2025-10-11 20:42:19] VERSION="7 (Core)"
[2025-10-11 20:42:19] ID="centos"
[2025-10-11 20:42:19] ID_LIKE="rhel fedora"
[2025-10-11 20:42:19] VERSION_ID="7"
[2025-10-11 20:42:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 20:42:19] ANSI_COLOR="0;31"
[2025-10-11 20:42:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 20:42:19] HOME_URL="https://www.centos.org/"
[2025-10-11 20:42:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 20:42:19] 
[2025-10-11 20:42:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 20:42:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 20:42:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 20:42:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 20:42:19] 
[2025-10-11 20:42:19] 2025-10-11 18:41:43,765 | INFO     | ***************************************
[2025-10-11 20:42:19] 2025-10-11 18:41:43,783 | WARNING  | process 2585484 can no longer be monitored (due to stat problems) - aborting
[2025-10-11 20:42:19] 2025-10-11 18:41:43,809 | INFO     | using path: /var/lib/boinc/slots/19/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 20:42:19] 2025-10-11 18:41:43,809 | INFO     | using path: /var/lib/boinc/slots/19/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 20:42:19] 2025-10-11 18:41:43,810 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/slots/19/PanDA_Pilot-6827430801/payload.stdout) since it has not been created yet
[2025-10-11 20:42:19] 2025-10-11 18:41:43,810 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-10-11 20:42:19] 2025-10-11 18:41:43,817 | INFO     | sufficient remaining disk space (118133620736 B)
[2025-10-11 20:42:19] 2025-10-11 18:41:43,817 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-10-11 20:42:19] 2025-10-11 18:41:43,817 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/19/PanDA_Pilot-6827430801/HITS.46376905._030624.pool.root.1 since it does not exist
[2025-10-11 20:42:19] 2025-10-11 18:41:43,849 | INFO     | number of running child processes to parent process 2585484: 1
[2025-10-11 20:42:19] 2025-10-11 18:41:43,849 | INFO     | maximum number of monitored processes: 6
[2025-10-11 20:42:19] 2025-10-11 18:41:43,849 | INFO     | aborting job monitoring since job object (job id=6827430801) has expired
[2025-10-11 20:42:19] 2025-10-11 18:41:44,268 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-10-11 20:42:19] 2025-10-11 18:41:44,274 | INFO     | sufficient remaining disk space (118133620736 B)
[2025-10-11 20:42:19] 2025-10-11 18:41:44,275 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 20:42:19] 2025-10-11 18:41:44,275 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 20:42:19] 2025-10-11 18:41:44,275 | INFO     | update_server=False
[2025-10-11 20:42:19] 2025-10-11 18:41:44,275 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 20:42:19] 2025-10-11 18:41:44,275 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-11 20:42:19] 2025-10-11 18:41:44,275 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 20:42:19] 2025-10-11 18:41:44,275 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 20:42:19] 2025-10-11 18:41:44,275 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 20:42:19] 2025-10-11 18:41:44,275 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 20:42:19] 2025-10-11 18:41:44,275 | INFO     | will abort loop
[2025-10-11 20:42:19] 2025-10-11 18:41:44,276 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 20:42:19] 2025-10-11 18:41:44,276 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 20:42:19] 2025-10-11 18:41:44,462 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 20:42:19] 2025-10-11 18:41:44,569 | INFO     | job.realtimelogging is not enabled
[2025-10-11 20:42:19] 2025-10-11 18:41:44,762 | INFO     | all data control threads have been joined
[2025-10-11 20:42:19] 2025-10-11 18:41:44,811 | INFO     | all payload control threads have been joined
[2025-10-11 20:42:19] 2025-10-11 18:41:45,280 | INFO     | [job] retrieve thread has finished
[2025-10-11 20:42:19] 2025-10-11 18:41:45,281 | INFO     | [job] queue monitor thread has finished
[2025-10-11 20:42:19] 2025-10-11 18:41:45,281 | INFO     | [job] job monitor thread has finished
[2025-10-11 20:42:19] 2025-10-11 18:41:45,389 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 20:42:19] 2025-10-11 18:41:45,443 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 20:42:19] 2025-10-11 18:41:45,473 | INFO     | [payload] validate_post thread has finished
[2025-10-11 20:42:19] 2025-10-11 18:41:45,574 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 20:42:19] 2025-10-11 18:41:45,592 | INFO     | all job control threads have been joined
[2025-10-11 20:42:19] 2025-10-11 18:41:45,767 | INFO     | [data] control thread has finished
[2025-10-11 20:42:19] 2025-10-11 18:41:45,778 | INFO     | [data] copytool_in thread has finished
[2025-10-11 20:42:19] 2025-10-11 18:41:45,816 | INFO     | [payload] control thread has finished
[2025-10-11 20:42:19] 2025-10-11 18:41:46,281 | INFO     | [data] copytool_out thread has finished
[2025-10-11 20:42:19] 2025-10-11 18:41:46,474 | INFO     | [payload] failed_post thread has finished
[2025-10-11 20:42:19] 2025-10-11 18:41:46,540 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 20:42:19] 2025-10-11 18:41:46,597 | INFO     | [job] control thread has finished
[2025-10-11 20:42:19] 2025-10-11 18:41:46,769 | INFO     | [job] validate thread has finished
[2025-10-11 20:42:19] 2025-10-11 18:41:48,468 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 20:42:19] 2025-10-11 18:42:14,740 | INFO     | [monitor] cgroup control has ended
[2025-10-11 20:42:19] 2025-10-11 18:42:14,807 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139718644451136)>', '<ExcThread(monitor, started 139717819488000)>']
[2025-10-11 20:42:19] 2025-10-11 18:42:15,434 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 20:42:19] 2025-10-11 18:42:15,434 | INFO     | [monitor] control thread has ended
[2025-10-11 20:42:19] 2025-10-11 18:42:19,818 | INFO     | all workflow threads have been joined
[2025-10-11 20:42:19] 2025-10-11 18:42:19,819 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 20:42:19] 2025-10-11 18:42:19,819 | INFO     | traces error code: 0
[2025-10-11 20:42:19] 2025-10-11 18:42:19,819 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 20:42:19] 2025-10-11 18:42:19,873 [wrapper] ==== pilot stdout END ====
[2025-10-11 20:42:19] 2025-10-11 18:42:19,874 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 20:42:19] 2025-10-11 18:42:19,876 [wrapper] pilotpid: 2578164
[2025-10-11 20:42:19] 2025-10-11 18:42:19,877 [wrapper] Pilot exit status: 0
[2025-10-11 20:42:19] 2025-10-11 18:42:19,880 [wrapper] pandaids: 6827430801
[2025-10-11 20:42:19] 2025-10-11 18:42:19,890 [wrapper] cleanup supervisor_pilot 2598385 2578165
[2025-10-11 20:42:19] 2025-10-11 18:42:19,891 [wrapper] Test setup, not cleaning
[2025-10-11 20:42:19] 2025-10-11 18:42:19,892 [wrapper] apfmon messages muted
[2025-10-11 20:42:19] 2025-10-11 18:42:19,893 [wrapper] ==== wrapper stdout END ====
[2025-10-11 20:42:19] 2025-10-11 18:42:19,894 [wrapper] ==== wrapper stderr END ====
[2025-10-11 20:42:19]  *** Error codes and diagnostics ***
[2025-10-11 20:42:19]     "exeErrorCode": 0,
[2025-10-11 20:42:19]     "exeErrorDiag": "",
[2025-10-11 20:42:19]     "pilotErrorCode": 0,
[2025-10-11 20:42:19]     "pilotErrorDiag": "",
[2025-10-11 20:42:19]  *** Listing of results directory ***
[2025-10-11 20:42:19] total 384632
[2025-10-11 20:42:19] -rw-r--r--. 1 boinc boinc    552446 Oct  2 23:35 pilot3.tar.gz
[2025-10-11 20:42:19] -rw-r--r--. 1 boinc boinc      5112 Oct  3 00:01 queuedata.json
[2025-10-11 20:42:19] -rwx------. 1 boinc boinc     36292 Oct  3 00:03 runpilot2-wrapper.sh
[2025-10-11 20:42:19] -rw-r--r--. 1 boinc boinc       100 Oct 11 19:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 20:42:19] -rwxr-xr-x. 1 boinc boinc      7986 Oct 11 19:34 run_atlas
[2025-10-11 20:42:19] -rw-r--r--. 1 boinc boinc       105 Oct 11 19:34 job.xml
[2025-10-11 20:42:19] -rw-r--r--. 1 boinc boinc      6275 Oct 11 19:34 init_data.xml
[2025-10-11 20:42:19] -rw-r--r--. 2 boinc boinc 214090555 Oct 11 19:34 EVNT.46376901._000991.pool.root.1
[2025-10-11 20:42:19] -rw-r--r--. 2 boinc boinc     15120 Oct 11 19:34 start_atlas.sh
[2025-10-11 20:42:19] drwxrwx--x. 2 boinc boinc        68 Oct 11 19:34 shared
[2025-10-11 20:42:19] -rw-r--r--. 2 boinc boinc    565597 Oct 11 19:34 input.tar.gz
[2025-10-11 20:42:19] -rw-r--r--. 1 boinc boinc         0 Oct 11 19:34 boinc_lockfile
[2025-10-11 20:42:19] -rw-r--r--. 1 boinc boinc      2518 Oct 11 19:34 pandaJob.out
[2025-10-11 20:42:19] -rw-------. 1 boinc boinc    975520 Oct 11 19:34 agis_schedconf.cvmfs.json
[2025-10-11 20:42:19] -rw-------. 1 boinc boinc   1560580 Oct 11 19:34 agis_ddmendpoints.agis.ALL.json
[2025-10-11 20:42:19] drwx------. 4 boinc boinc      4096 Oct 11 19:34 pilot3
[2025-10-11 20:42:19] -rw-------. 1 boinc boinc 174027472 Oct 11 20:41 HITS.46376905._030624.pool.root.1
[2025-10-11 20:42:19] -rw-r--r--. 1 boinc boinc       529 Oct 11 20:41 boinc_task_state.xml
[2025-10-11 20:42:19] -rw-------. 1 boinc boinc        95 Oct 11 20:41 pilot_heartbeat.json
[2025-10-11 20:42:19] -rw-------. 1 boinc boinc      1022 Oct 11 20:41 memory_monitor_summary.json
[2025-10-11 20:42:19] -rw-------. 1 boinc boinc    328964 Oct 11 20:41 log.46376905._030624.job.log.tgz.1
[2025-10-11 20:42:19] -rw-------. 1 boinc boinc      7790 Oct 11 20:41 heartbeat.json
[2025-10-11 20:42:19] -rw-r--r--. 1 boinc boinc      8192 Oct 11 20:41 boinc_mmap_file
[2025-10-11 20:42:19] -rw-r--r--. 1 boinc boinc        27 Oct 11 20:41 wrapper_checkpoint.txt
[2025-10-11 20:42:19] -rw-------. 1 boinc boinc      5911 Oct 11 20:42 pilotlog.txt
[2025-10-11 20:42:19] -rw-------. 1 boinc boinc    600829 Oct 11 20:42 log.46376905._030624.job.log.1
[2025-10-11 20:42:19] -rw-------. 1 boinc boinc       357 Oct 11 20:42 output.list
[2025-10-11 20:42:19] -rw-r--r--. 1 boinc boinc       620 Oct 11 20:42 runtime_log
[2025-10-11 20:42:19] -rw-------. 1 boinc boinc    952320 Oct 11 20:42 result.tar.gz
[2025-10-11 20:42:19] -rw-r--r--. 1 boinc boinc      8730 Oct 11 20:42 runtime_log.err
[2025-10-11 20:42:19] -rw-------. 1 boinc boinc       651 Oct 11 20:42 ECYNDmLZgO8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmLmFNDmQq3Uyn.diag
[2025-10-11 20:42:19] -rw-r--r--. 1 boinc boinc     22425 Oct 11 20:42 stderr.txt
[2025-10-11 20:42:19] HITS file was successfully produced:
[2025-10-11 20:42:19] -rw-------. 1 boinc boinc 174027472 Oct 11 20:41 shared/HITS.pool.root.1
[2025-10-11 20:42:19]  *** Contents of shared directory: ***
[2025-10-11 20:42:19] total 380532
[2025-10-11 20:42:19] -rw-r--r--. 2 boinc boinc 214090555 Oct 11 19:34 ATLAS.root_0
[2025-10-11 20:42:19] -rw-r--r--. 2 boinc boinc     15120 Oct 11 19:34 start_atlas.sh
[2025-10-11 20:42:19] -rw-r--r--. 2 boinc boinc    565597 Oct 11 19:34 input.tar.gz
[2025-10-11 20:42:19] -rw-------. 1 boinc boinc 174027472 Oct 11 20:41 HITS.pool.root.1
[2025-10-11 20:42:19] -rw-------. 1 boinc boinc    952320 Oct 11 20:42 result.tar.gz
20:42:21 (2574419): run_atlas exited; CPU time 30434.964399
20:42:21 (2574419): called boinc_finish(0)

</stderr_txt>
]]>

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