Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:36:27 (3393052): wrapper (7.7.26015): starting
06:36:27 (3393052): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 06:36:27] Arguments: --nthreads 12
[2025-10-11 06:36:27] Threads: 12
[2025-10-11 06:36:27] Checking for CVMFS
[2025-10-11 06:36:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 06:36:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 06:36:27] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 06:36:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 06:36:27] 2.13.2.0 135553 2641 115180 151581 0 233 30592476 32503809 8209 16776704 0 43948383 99.968 3045221 51269 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 06:36:27] CVMFS is ok
[2025-10-11 06:36:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 06:36:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 06:36:27] Further information can be found at the LHC@home message board.
[2025-10-11 06:36:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 06:36:27] Checking for apptainer binary...
[2025-10-11 06:36:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 06:36:27] Running /usr/bin/apptainer --version
[2025-10-11 06:36:27] apptainer version 1.4.3-1.el9
[2025-10-11 06:36:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 06:36:27] c8-7-2.aglt2.org
[2025-10-11 06:36:27] apptainer works
[2025-10-11 06:36:27] Set ATHENA_PROC_NUMBER=12
[2025-10-11 06:36:27] Set ATHENA_CORE_NUMBER=12
[2025-10-11 06:36:27] Starting ATLAS job with PandaID=6837874154
[2025-10-11 06:36:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 07:03:42]  *** The last 200 lines of the pilot log: ***
[2025-10-11 07:03:42]  surl=/tmp/boinchome/slots/6/PanDA_Pilot-6837874154/log.46676269._046676.job.log.tgz.1
[2025-10-11 07:03:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cb/a9/log.46676269._046676.job.log.tgz.1
[2025-10-11 07:03:42]  workdir=None
[2025-10-11 07:03:42] ]
[2025-10-11 07:03:42] 2025-10-11 11:02:45,581 | INFO     | transferring file log.46676269._046676.job.log.tgz.1 from /tmp/boinchome/slots/6/PanDA_Pilot-6837874154/log.46676269._046676.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-11 07:03:42] 2025-10-11 11:02:45,581 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/6/PanDA_Pilot-6837874154/log.46676269._046676.job.log.tgz.1 /tmp/boinchome/slots/6/log.46676269._046676.job
[2025-10-11 07:03:42] 2025-10-11 11:02:45,598 | INFO     | adding to output.list: log.46676269._046676.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cb/a9/log.46676269._046676.job.log.tg
[2025-10-11 07:03:42] 2025-10-11 11:02:45,598 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 07:03:42] 2025-10-11 11:02:45,599 | INFO     | summary of transferred files:
[2025-10-11 07:03:42] 2025-10-11 11:02:45,599 | INFO     |  -- lfn=log.46676269._046676.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 07:03:42] 2025-10-11 11:02:45,599 | INFO     | stage-out finished correctly
[2025-10-11 07:03:42] 2025-10-11 11:02:46,203 | INFO     | monitor loop #119: job 0:6837874154 is in state 'finished'
[2025-10-11 07:03:42] 2025-10-11 11:02:46,203 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 07:03:42] 2025-10-11 11:02:46,875 | INFO     | time since job start (1572s) is within the limit (172800.0s)
[2025-10-11 07:03:42] 2025-10-11 11:02:48,492 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 07:03:42] 2025-10-11 11:02:48,706 | INFO     | monitor loop #120: job 0:6837874154 is in state 'finished'
[2025-10-11 07:03:42] 2025-10-11 11:02:48,706 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 07:03:42] 2025-10-11 11:02:48,881 | INFO     | time since job start (1574s) is within the limit (172800.0s)
[2025-10-11 07:03:42] 2025-10-11 11:02:50,886 | INFO     | time since job start (1576s) is within the limit (172800.0s)
[2025-10-11 07:03:42] 2025-10-11 11:02:51,209 | INFO     | monitor loop #121: job 0:6837874154 is in state 'finished'
[2025-10-11 07:03:42] 2025-10-11 11:02:51,209 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 07:03:42] 2025-10-11 11:02:51,332 | INFO     | job 6837874154 has state=finished
[2025-10-11 07:03:42] 2025-10-11 11:02:51,332 | INFO     | preparing for final server update for job 6837874154 in state='finished'
[2025-10-11 07:03:42] 2025-10-11 11:02:51,332 | INFO     | this job has now completed (state=finished)
[2025-10-11 07:03:42] 2025-10-11 11:02:51,333 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 07:03:42] 2025-10-11 11:02:51,333 | INFO     | log transfer has been attempted: DONE
[2025-10-11 07:03:42] 2025-10-11 11:02:51,333 | INFO     | job 6837874154 has finished - writing final server update
[2025-10-11 07:03:42] 2025-10-11 11:02:51,333 | INFO     | total number of processed events: 400 (read)
[2025-10-11 07:03:42] 2025-10-11 11:02:51,333 | INFO     | executing command: lscpu
[2025-10-11 07:03:42] 2025-10-11 11:02:51,397 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 07:03:42] 2025-10-11 11:02:52,379 | INFO     | PID=3397107 has CPU usage=10.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-11 07:03:42] 2025-10-11 11:02:52,381 | INFO     | .. there are 11 such processes running
[2025-10-11 07:03:42] 2025-10-11 11:02:53,381 | INFO     | time since job start (1579s) is within the limit (172800.0s)
[2025-10-11 07:03:42] 2025-10-11 11:02:53,713 | INFO     | monitor loop #122: job 0:6837874154 is in state 'finished'
[2025-10-11 07:03:42] 2025-10-11 11:02:53,713 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 07:03:42] 2025-10-11 11:02:54,805 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-11 07:03:42] 2025-10-11 11:02:54,822 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3581.0024453124956
[2025-10-11 07:03:42] 2025-10-11 11:02:54,835 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6837874154/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 07:03:42] 2025-10-11 11:02:54,836 | INFO     | extracted standard info from prmon json
[2025-10-11 07:03:42] 2025-10-11 11:02:54,836 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 07:03:42] 2025-10-11 11:02:54,836 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 07:03:42] 2025-10-11 11:02:54,837 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 07:03:42] 2025-10-11 11:02:54,837 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 07:03:42] 2025-10-11 11:02:54,838 | INFO     | fitting pss+swap vs Time
[2025-10-11 07:03:42] 2025-10-11 11:02:54,838 | INFO     | sum of square deviations: 2120970.0
[2025-10-11 07:03:42] 2025-10-11 11:02:54,838 | INFO     | sum of deviations: -8399944.0
[2025-10-11 07:03:42] 2025-10-11 11:02:54,838 | INFO     | mean x: 1760179870.0
[2025-10-11 07:03:42] 2025-10-11 11:02:54,838 | INFO     | mean y: 2430435.3684210526
[2025-10-11 07:03:42] 2025-10-11 11:02:54,838 | INFO     | -- intersect: 6973491948.698302
[2025-10-11 07:03:42] 2025-10-11 11:02:54,838 | INFO     | intersect: 6973491948.698302
[2025-10-11 07:03:42] 2025-10-11 11:02:54,838 | INFO     | chi2: 0.0009872637401893388
[2025-10-11 07:03:42] 2025-10-11 11:02:54,838 | INFO     | -- intersect: 6973491948.698302
[2025-10-11 07:03:42] 2025-10-11 11:02:54,838 | INFO     | current memory leak: -3.96 B/s (using 19 data points, chi2=0.00)
[2025-10-11 07:03:42] 2025-10-11 11:02:54,839 | INFO     | could have reported an average CPU frequency of 3549 MHz (4 samples)
[2025-10-11 07:03:42] 2025-10-11 11:02:54,839 | INFO     | ..............................
[2025-10-11 07:03:42] 2025-10-11 11:02:54,839 | INFO     | . Timing measurements:
[2025-10-11 07:03:42] 2025-10-11 11:02:54,839 | INFO     | . get job = 0 s
[2025-10-11 07:03:42] 2025-10-11 11:02:54,839 | INFO     | . initial setup = 2 s
[2025-10-11 07:03:42] 2025-10-11 11:02:54,839 | INFO     | . payload setup = 3 s
[2025-10-11 07:03:42] 2025-10-11 11:02:54,839 | INFO     | . stage-in = 0 s
[2025-10-11 07:03:42] 2025-10-11 11:02:54,839 | INFO     | . payload execution = 1548 s
[2025-10-11 07:03:42] 2025-10-11 11:02:54,839 | INFO     | . stage-out = 0 s
[2025-10-11 07:03:42] 2025-10-11 11:02:54,840 | INFO     | . log creation = 0 s
[2025-10-11 07:03:42] 2025-10-11 11:02:54,840 | INFO     | ..............................
[2025-10-11 07:03:42] 2025-10-11 11:02:54,899 | INFO     | 
[2025-10-11 07:03:42] 2025-10-11 11:02:54,900 | INFO     | job summary report
[2025-10-11 07:03:42] 2025-10-11 11:02:54,900 | INFO     | --------------------------------------------------
[2025-10-11 07:03:42] 2025-10-11 11:02:54,900 | INFO     | PanDA job id: 6837874154
[2025-10-11 07:03:42] 2025-10-11 11:02:54,900 | INFO     | task id: 46676269
[2025-10-11 07:03:42] 2025-10-11 11:02:54,900 | INFO     | errors: (none)
[2025-10-11 07:03:42] 2025-10-11 11:02:54,900 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 07:03:42] 2025-10-11 11:02:54,900 | INFO     | pilot state: finished 
[2025-10-11 07:03:42] 2025-10-11 11:02:54,900 | INFO     | transexitcode: 0
[2025-10-11 07:03:42] 2025-10-11 11:02:54,900 | INFO     | exeerrorcode: 0
[2025-10-11 07:03:42] 2025-10-11 11:02:54,900 | INFO     | exeerrordiag: 
[2025-10-11 07:03:42] 2025-10-11 11:02:54,900 | INFO     | exitcode: 0
[2025-10-11 07:03:42] 2025-10-11 11:02:54,900 | INFO     | exitmsg: OK
[2025-10-11 07:03:42] 2025-10-11 11:02:54,900 | INFO     | cpuconsumptiontime: 16578 s
[2025-10-11 07:03:42] 2025-10-11 11:02:54,900 | INFO     | nevents: 400
[2025-10-11 07:03:42] 2025-10-11 11:02:54,900 | INFO     | neventsw: 0
[2025-10-11 07:03:42] 2025-10-11 11:02:54,900 | INFO     | pid: 3409105
[2025-10-11 07:03:42] 2025-10-11 11:02:54,900 | INFO     | pgrp: 3409105
[2025-10-11 07:03:42] 2025-10-11 11:02:54,900 | INFO     | corecount: 12
[2025-10-11 07:03:42] 2025-10-11 11:02:54,900 | INFO     | event service: False
[2025-10-11 07:03:42] 2025-10-11 11:02:54,900 | INFO     | sizes: {0: 2348857, 3: 2349119, 11: 2349147, 1556: 2373987, 1557: 2382985, 1560: 2383041, 1566: 2383363}
[2025-10-11 07:03:42] 2025-10-11 11:02:54,900 | INFO     | --------------------------------------------------
[2025-10-11 07:03:42] 2025-10-11 11:02:54,901 | INFO     | 
[2025-10-11 07:03:42] 2025-10-11 11:02:54,901 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-10-11 07:03:42] 2025-10-11 11:02:54,919 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 07:03:42] 2025-10-11 11:02:54,919 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 07:03:42] 2025-10-11 11:02:54,919 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 07:03:42] 2025-10-11 11:02:54,919 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 07:03:42] 2025-10-11 11:02:54,919 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 07:03:42] 2025-10-11 11:02:54,919 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 07:03:42] 2025-10-11 11:02:54,919 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 07:03:42] 2025-10-11 11:02:54,919 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 07:03:42] 2025-10-11 11:02:54,919 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 07:03:42] 2025-10-11 11:02:54,919 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 07:03:42] 2025-10-11 11:02:54,919 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 07:03:42] 2025-10-11 11:02:54,919 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 07:03:42] 2025-10-11 11:02:54,919 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 07:03:42] 2025-10-11 11:02:54,919 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 07:03:42] 2025-10-11 11:02:54,920 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 07:03:42] 2025-10-11 11:02:54,920 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 07:03:42] 2025-10-11 11:02:54,920 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 07:03:42] 2025-10-11 11:02:54,920 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 07:03:42] 2025-10-11 11:02:54,920 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 07:03:42] 2025-10-11 11:02:54,920 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 07:03:42] 2025-10-11 11:02:54,920 | INFO     | job 6837874154 has completed (purged errors)
[2025-10-11 07:03:42] 2025-10-11 11:02:54,920 | INFO     | overall cleanup function is called
[2025-10-11 07:03:42] 2025-10-11 11:02:55,927 | INFO     | --- collectZombieJob: --- 10, [3409105]
[2025-10-11 07:03:42] 2025-10-11 11:02:55,928 | INFO     | zombie collector waiting for pid 3409105
[2025-10-11 07:03:42] 2025-10-11 11:02:55,928 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 07:03:42] 2025-10-11 11:02:55,928 | INFO     | collected zombie processes
[2025-10-11 07:03:42] 2025-10-11 11:02:55,928 | INFO     | will attempt to kill all subprocesses of pid=3409105
[2025-10-11 07:03:42] 2025-10-11 11:02:56,301 | INFO     | process IDs to be killed: [3409105] (in reverse order)
[2025-10-11 07:03:42] 2025-10-11 11:02:56,432 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 07:03:42] 2025-10-11 11:02:56,432 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 07:03:42] 2025-10-11 11:02:56,451 | INFO     | did not find any defunct processes belonging to 3409105
[2025-10-11 07:03:42] 2025-10-11 11:02:56,466 | INFO     | did not find any defunct processes belonging to 3409105
[2025-10-11 07:03:42] 2025-10-11 11:02:56,466 | INFO     | ready for new job
[2025-10-11 07:03:42] 2025-10-11 11:02:56,467 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 07:03:42] 2025-10-11 11:02:56,468 | INFO     | ***************************************
[2025-10-11 07:03:42] 2025-10-11 11:02:56,468 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 07:03:42] 2025-10-11 11:02:56,468 | INFO     | ***************************************
[2025-10-11 07:03:42] 2025-10-11 11:02:56,468 | INFO     | 
[2025-10-11 07:03:42] 2025-10-11 11:02:56,485 | INFO     | architecture information:
[2025-10-11 07:03:42] 2025-10-11 11:02:56,485 | INFO     | executing command: cat /etc/os-release
[2025-10-11 07:03:42] 2025-10-11 11:02:56,498 | INFO     | cat /etc/os-release:
[2025-10-11 07:03:42] NAME="CentOS Linux"
[2025-10-11 07:03:42] VERSION="7 (Core)"
[2025-10-11 07:03:42] ID="centos"
[2025-10-11 07:03:42] ID_LIKE="rhel fedora"
[2025-10-11 07:03:42] VERSION_ID="7"
[2025-10-11 07:03:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 07:03:42] ANSI_COLOR="0;31"
[2025-10-11 07:03:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 07:03:42] HOME_URL="https://www.centos.org/"
[2025-10-11 07:03:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 07:03:42] 
[2025-10-11 07:03:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 07:03:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 07:03:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 07:03:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 07:03:42] 
[2025-10-11 07:03:42] 2025-10-11 11:02:56,499 | INFO     | ***************************************
[2025-10-11 07:03:42] 2025-10-11 11:02:57,002 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-10-11 07:03:42] 2025-10-11 11:02:57,014 | INFO     | sufficient remaining disk space (90965016576 B)
[2025-10-11 07:03:42] 2025-10-11 11:02:57,014 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 07:03:42] 2025-10-11 11:02:57,015 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 07:03:42] 2025-10-11 11:02:57,015 | INFO     | update_server=False
[2025-10-11 07:03:42] 2025-10-11 11:02:57,015 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 07:03:42] 2025-10-11 11:02:57,015 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 07:03:42] 2025-10-11 11:02:57,221 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 07:03:42] 2025-10-11 11:02:57,222 | INFO     | aborting loop
[2025-10-11 07:03:42] 2025-10-11 11:02:58,020 | INFO     | [job] retrieve thread has finished
[2025-10-11 07:03:42] 2025-10-11 11:02:58,065 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 07:03:42] 2025-10-11 11:02:58,088 | INFO     | all data control threads have been joined
[2025-10-11 07:03:42] 2025-10-11 11:02:58,227 | INFO     | [job] job monitor thread has finished
[2025-10-11 07:03:42] 2025-10-11 11:02:58,227 | INFO     | [job] validate thread has finished
[2025-10-11 07:03:42] 2025-10-11 11:02:58,348 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 07:03:42] 2025-10-11 11:02:58,404 | INFO     | [data] copytool_in thread has finished
[2025-10-11 07:03:42] 2025-10-11 11:02:58,459 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 07:03:42] 2025-10-11 11:02:58,490 | INFO     | all payload control threads have been joined
[2025-10-11 07:03:42] 2025-10-11 11:02:58,641 | INFO     | all job control threads have been joined
[2025-10-11 07:03:42] 2025-10-11 11:02:58,906 | INFO     | [payload] validate_post thread has finished
[2025-10-11 07:03:42] 2025-10-11 11:02:59,021 | INFO     | [data] copytool_out thread has finished
[2025-10-11 07:03:42] 2025-10-11 11:02:59,054 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 07:03:42] 2025-10-11 11:02:59,088 | INFO     | [data] control thread has finished
[2025-10-11 07:03:42] 2025-10-11 11:02:59,238 | INFO     | [payload] failed_post thread has finished
[2025-10-11 07:03:42] 2025-10-11 11:02:59,495 | INFO     | [payload] control thread has finished
[2025-10-11 07:03:42] 2025-10-11 11:02:59,646 | INFO     | [job] control thread has finished
[2025-10-11 07:03:42] 2025-10-11 11:02:59,910 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 07:03:42] 2025-10-11 11:03:00,916 | INFO     | [job] queue monitor thread has finished
[2025-10-11 07:03:42] 2025-10-11 11:03:03,060 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 07:03:42] 2025-10-11 11:03:07,602 | INFO     | job.realtimelogging is not enabled
[2025-10-11 07:03:42] 2025-10-11 11:03:08,607 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 07:03:42] 2025-10-11 11:03:26,951 | INFO     | PID=3397107 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 07:03:42] 2025-10-11 11:03:26,952 | INFO     | .. there are 11 such processes running
[2025-10-11 07:03:42] 2025-10-11 11:03:26,952 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 07:03:42] 2025-10-11 11:03:26,952 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 07:03:42] 2025-10-11 11:03:26,952 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 07:03:42] 2025-10-11 11:03:36,729 | INFO     | [monitor] cgroup control has ended
[2025-10-11 07:03:42] 2025-10-11 11:03:37,371 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140214524331840)>', '<ExcThread(monitor, started 140213904996096)>']
[2025-10-11 07:03:42] 2025-10-11 11:03:38,007 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 07:03:42] 2025-10-11 11:03:38,008 | INFO     | [monitor] control thread has ended
[2025-10-11 07:03:42] 2025-10-11 11:03:42,396 | INFO     | all workflow threads have been joined
[2025-10-11 07:03:42] 2025-10-11 11:03:42,396 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 07:03:42] 2025-10-11 11:03:42,396 | INFO     | traces error code: 0
[2025-10-11 07:03:42] 2025-10-11 11:03:42,396 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 07:03:42] 2025-10-11 11:03:42,470 [wrapper] ==== pilot stdout END ====
[2025-10-11 07:03:42] 2025-10-11 11:03:42,472 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 07:03:42] 2025-10-11 11:03:42,474 [wrapper] pilotpid: 3397107
[2025-10-11 07:03:42] 2025-10-11 11:03:42,476 [wrapper] Pilot exit status: 0
[2025-10-11 07:03:42] 2025-10-11 11:03:42,484 [wrapper] pandaids: 6837874154
[2025-10-11 07:03:42] 2025-10-11 11:03:42,577 [wrapper] cleanup supervisor_pilot 3570579 3397108
[2025-10-11 07:03:42] 2025-10-11 11:03:42,580 [wrapper] Test setup, not cleaning
[2025-10-11 07:03:42] 2025-10-11 11:03:42,582 [wrapper] apfmon messages muted
[2025-10-11 07:03:42] 2025-10-11 11:03:42,584 [wrapper] ==== wrapper stdout END ====
[2025-10-11 07:03:42] 2025-10-11 11:03:42,586 [wrapper] ==== wrapper stderr END ====
[2025-10-11 07:03:42]  *** Error codes and diagnostics ***
[2025-10-11 07:03:42]     "exeErrorCode": 0,
[2025-10-11 07:03:42]     "exeErrorDiag": "",
[2025-10-11 07:03:42]     "pilotErrorCode": 0,
[2025-10-11 07:03:42]     "pilotErrorDiag": "",
[2025-10-11 07:03:42]  *** Listing of results directory ***
[2025-10-11 07:03:42] total 406584
[2025-10-11 07:03:42] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 18:56 pilot3.tar.gz
[2025-10-11 07:03:42] -rwx------. 1 boincer umatlas     36292 Oct 10 19:07 runpilot2-wrapper.sh
[2025-10-11 07:03:42] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 19:07 queuedata.json
[2025-10-11 07:03:42] -rw-r--r--. 1 boincer umatlas       100 Oct 11 06:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 07:03:42] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 06:36 run_atlas
[2025-10-11 07:03:42] -rw-r--r--. 1 boincer umatlas       105 Oct 11 06:36 job.xml
[2025-10-11 07:03:42] -rw-r--r--. 2 boincer umatlas 219820195 Oct 11 06:36 EVNT.46676267._001885.pool.root.1
[2025-10-11 07:03:42] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 06:36 start_atlas.sh
[2025-10-11 07:03:42] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 06:36 shared
[2025-10-11 07:03:42] -rw-r--r--. 2 boincer umatlas    569677 Oct 11 06:36 input.tar.gz
[2025-10-11 07:03:42] -rw-r--r--. 1 boincer umatlas         0 Oct 11 06:36 boinc_lockfile
[2025-10-11 07:03:42] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 06:36 pandaJob.out
[2025-10-11 07:03:42] -rw-------. 1 boincer umatlas    975517 Oct 11 06:36 agis_schedconf.cvmfs.json
[2025-10-11 07:03:42] -rw-------. 1 boincer umatlas   1560580 Oct 11 06:36 agis_ddmendpoints.agis.ALL.json
[2025-10-11 07:03:42] drwx------. 5 boincer umatlas      4096 Oct 11 06:36 pilot3
[2025-10-11 07:03:42] -rw-r--r--. 1 boincer umatlas      7161 Oct 11 07:00 init_data.xml
[2025-10-11 07:03:42] -rw-------. 1 boincer umatlas 191382170 Oct 11 07:02 HITS.46676269._046676.pool.root.1
[2025-10-11 07:03:42] -rw-r--r--. 1 boincer umatlas       529 Oct 11 07:02 boinc_task_state.xml
[2025-10-11 07:03:42] -rw-------. 1 boincer umatlas      1029 Oct 11 07:02 memory_monitor_summary.json
[2025-10-11 07:03:42] -rw-------. 1 boincer umatlas    344402 Oct 11 07:02 log.46676269._046676.job.log.tgz.1
[2025-10-11 07:03:42] -rw-------. 1 boincer umatlas      7762 Oct 11 07:02 heartbeat.json
[2025-10-11 07:03:42] -rw-------. 1 boincer umatlas        95 Oct 11 07:03 pilot_heartbeat.json
[2025-10-11 07:03:42] -rw-r--r--. 1 boincer umatlas        27 Oct 11 07:03 wrapper_checkpoint.txt
[2025-10-11 07:03:42] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 07:03 boinc_mmap_file
[2025-10-11 07:03:42] -rw-------. 1 boincer umatlas      4896 Oct 11 07:03 pilotlog.txt
[2025-10-11 07:03:42] -rw-------. 1 boincer umatlas    266431 Oct 11 07:03 log.46676269._046676.job.log.1
[2025-10-11 07:03:42] -rw-------. 1 boincer umatlas       357 Oct 11 07:03 output.list
[2025-10-11 07:03:42] -rw-r--r--. 1 boincer umatlas       620 Oct 11 07:03 runtime_log
[2025-10-11 07:03:42] -rw-------. 1 boincer umatlas    634880 Oct 11 07:03 result.tar.gz
[2025-10-11 07:03:42] -rw-r--r--. 1 boincer umatlas      8695 Oct 11 07:03 runtime_log.err
[2025-10-11 07:03:42] -rw-------. 1 boincer umatlas       646 Oct 11 07:03 diuNDmDObR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNfeNDmlNruIo.diag
[2025-10-11 07:03:42] -rw-r--r--. 1 boincer umatlas     22330 Oct 11 07:03 stderr.txt
[2025-10-11 07:03:42] HITS file was successfully produced:
[2025-10-11 07:03:42] -rw-------. 1 boincer umatlas 191382170 Oct 11 07:02 shared/HITS.pool.root.1
[2025-10-11 07:03:42]  *** Contents of shared directory: ***
[2025-10-11 07:03:42] total 402776
[2025-10-11 07:03:42] -rw-r--r--. 2 boincer umatlas 219820195 Oct 11 06:36 ATLAS.root_0
[2025-10-11 07:03:42] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 06:36 start_atlas.sh
[2025-10-11 07:03:42] -rw-r--r--. 2 boincer umatlas    569677 Oct 11 06:36 input.tar.gz
[2025-10-11 07:03:42] -rw-------. 1 boincer umatlas 191382170 Oct 11 07:02 HITS.pool.root.1
[2025-10-11 07:03:42] -rw-------. 1 boincer umatlas    634880 Oct 11 07:03 result.tar.gz
07:03:44 (3393052): run_atlas exited; CPU time 16613.864594
07:03:44 (3393052): called boinc_finish(0)

</stderr_txt>
]]>

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