Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:21:04 (2545247): wrapper (7.7.26015): starting
00:21:04 (2545247): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 00:21:04] Arguments: --nthreads 4
[2025-10-13 00:21:04] Threads: 4
[2025-10-13 00:21:04] Checking for CVMFS
[2025-10-13 00:21:04] No cvmfs_config command found, will try listing directly
[2025-10-13 00:21:04] CVMFS is ok
[2025-10-13 00:21:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:21:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:21:04] Further information can be found at the LHC@home message board.
[2025-10-13 00:21:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:21:04] Checking for apptainer binary...
[2025-10-13 00:21:04] which: no apptainer in ((null))
[2025-10-13 00:21:04] apptainer is not installed, using version from CVMFS
[2025-10-13 00:21:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:21:04] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot128/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-10-13 00:21:04] apptainer works
[2025-10-13 00:21:04] Set ATHENA_PROC_NUMBER=4
[2025-10-13 00:21:04] Set ATHENA_CORE_NUMBER=4
[2025-10-13 00:21:04] Starting ATLAS job with PandaID=6838228138
[2025-10-13 00:21:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot128/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 03:04:59]  *** The last 200 lines of the pilot log: ***
[2025-10-13 03:04:59] 2025-10-13 00:52:03,336 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 03:04:59] 2025-10-13 00:52:03,336 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 03:04:59] 2025-10-13 00:52:03,340 | INFO     | fitting pss+swap vs Time
[2025-10-13 03:04:59] 2025-10-13 00:52:03,340 | INFO     | sum of square deviations: 1005179777.0
[2025-10-13 03:04:59] 2025-10-13 00:52:03,341 | INFO     | sum of deviations: -19131815093.000008
[2025-10-13 03:04:59] 2025-10-13 00:52:03,341 | INFO     | mean x: 1760312194.5
[2025-10-13 03:04:59] 2025-10-13 00:52:03,341 | INFO     | mean y: 2364463.864864865
[2025-10-13 03:04:59] 2025-10-13 00:52:03,341 | INFO     | -- intersect: 33506786440.638348
[2025-10-13 03:04:59] 2025-10-13 00:52:03,341 | INFO     | intersect: 33506786440.638348
[2025-10-13 03:04:59] 2025-10-13 00:52:03,341 | INFO     | chi2: 2.1535860498926547
[2025-10-13 03:04:59] 2025-10-13 00:52:03,342 | INFO     | sum of square deviations: 906703512.0
[2025-10-13 03:04:59] 2025-10-13 00:52:03,343 | INFO     | sum of deviations: -8439716488.000001
[2025-10-13 03:04:59] 2025-10-13 00:52:03,343 | INFO     | mean x: 1760312042.0
[2025-10-13 03:04:59] 2025-10-13 00:52:03,343 | INFO     | mean y: 2380614.727272727
[2025-10-13 03:04:59] 2025-10-13 00:52:03,343 | INFO     | -- intersect: 16387598459.66747
[2025-10-13 03:04:59] 2025-10-13 00:52:03,343 | INFO     | intersect: 16387598459.66747
[2025-10-13 03:04:59] 2025-10-13 00:52:03,343 | INFO     | chi2: 1.2899605300230743
[2025-10-13 03:04:59] 2025-10-13 00:52:03,344 | INFO     | current chi2=1.2899605300230743 (change=40.10174192540984 %)
[2025-10-13 03:04:59] 2025-10-13 00:52:03,344 | INFO     | sum of square deviations: 814878534.5
[2025-10-13 03:04:59] 2025-10-13 00:52:03,344 | INFO     | sum of deviations: -7574106968.000001
[2025-10-13 03:04:59] 2025-10-13 00:52:03,345 | INFO     | mean x: 1760311889.5
[2025-10-13 03:04:59] 2025-10-13 00:52:03,345 | INFO     | mean y: 2382052.84057971
[2025-10-13 03:04:59] 2025-10-13 00:52:03,345 | INFO     | -- intersect: 16364072763.341433
[2025-10-13 03:04:59] 2025-10-13 00:52:03,345 | INFO     | intersect: 16364072763.341433
[2025-10-13 03:04:59] 2025-10-13 00:52:03,345 | INFO     | chi2: 1.2899967001008734
[2025-10-13 03:04:59] 2025-10-13 00:52:03,345 | INFO     | current chi2=1.2899967001008734 (change=-0.0028039677926002538 %)
[2025-10-13 03:04:59] 2025-10-13 00:52:03,345 | INFO     | right removable region: 137
[2025-10-13 03:04:59] 2025-10-13 00:52:03,346 | INFO     | sum of square deviations: 906703512.0
[2025-10-13 03:04:59] 2025-10-13 00:52:03,346 | INFO     | sum of deviations: -35162115015.0
[2025-10-13 03:04:59] 2025-10-13 00:52:03,346 | INFO     | mean x: 1760312347.0
[2025-10-13 03:04:59] 2025-10-13 00:52:03,347 | INFO     | mean y: 2388784.6713286713
[2025-10-13 03:04:59] 2025-10-13 00:52:03,347 | INFO     | -- intersect: 68267598291.81018
[2025-10-13 03:04:59] 2025-10-13 00:52:03,347 | INFO     | intersect: 68267598291.81018
[2025-10-13 03:04:59] 2025-10-13 00:52:03,347 | INFO     | chi2: 0.966836394088595
[2025-10-13 03:04:59] 2025-10-13 00:52:03,347 | INFO     | current chi2=0.966836394088595 (change=55.105745872713705 %)
[2025-10-13 03:04:59] 2025-10-13 00:52:03,347 | INFO     | sum of square deviations: 814878534.5
[2025-10-13 03:04:59] 2025-10-13 00:52:03,348 | INFO     | sum of deviations: -32903336346.5
[2025-10-13 03:04:59] 2025-10-13 00:52:03,348 | INFO     | mean x: 1760312499.5
[2025-10-13 03:04:59] 2025-10-13 00:52:03,348 | INFO     | mean y: 2385026.934782609
[2025-10-13 03:04:59] 2025-10-13 00:52:03,348 | INFO     | -- intersect: 71080652270.20651
[2025-10-13 03:04:59] 2025-10-13 00:52:03,349 | INFO     | intersect: 71080652270.20651
[2025-10-13 03:04:59] 2025-10-13 00:52:03,352 | INFO     | chi2: 0.9669944219119038
[2025-10-13 03:04:59] 2025-10-13 00:52:03,352 | INFO     | current chi2=0.9669944219119038 (change=-0.016344836031718397 %)
[2025-10-13 03:04:59] 2025-10-13 00:52:03,352 | INFO     | left removable region: 20
[2025-10-13 03:04:59] 2025-10-13 00:52:03,352 | INFO     | sum of square deviations: 496597218.0
[2025-10-13 03:04:59] 2025-10-13 00:52:03,353 | INFO     | sum of deviations: -16697120934.0
[2025-10-13 03:04:59] 2025-10-13 00:52:03,353 | INFO     | mean x: 1760312469.0
[2025-10-13 03:04:59] 2025-10-13 00:52:03,353 | INFO     | mean y: 2396664.316239316
[2025-10-13 03:04:59] 2025-10-13 00:52:03,353 | INFO     | -- intersect: 59189498627.74513
[2025-10-13 03:04:59] 2025-10-13 00:52:03,353 | INFO     | intersect: 59189498627.74513
[2025-10-13 03:04:59] 2025-10-13 00:52:03,354 | INFO     | chi2: 0.06638329826359592
[2025-10-13 03:04:59] 2025-10-13 00:52:03,354 | INFO     | -- intersect: 59189498627.74513
[2025-10-13 03:04:59] 2025-10-13 00:52:03,354 | INFO     | current memory leak: -33.62 B/s (using 117 data points, chi2=0.07)
[2025-10-13 03:04:59] 2025-10-13 00:52:03,354 | INFO     | could have reported an average CPU frequency of 2712 MHz (8 samples)
[2025-10-13 03:04:59] 2025-10-13 00:52:03,355 | INFO     | ..............................
[2025-10-13 03:04:59] 2025-10-13 00:52:03,355 | INFO     | . Timing measurements:
[2025-10-13 03:04:59] 2025-10-13 00:52:03,355 | INFO     | . get job = 0 s
[2025-10-13 03:04:59] 2025-10-13 00:52:03,355 | INFO     | . initial setup = 1 s
[2025-10-13 03:04:59] 2025-10-13 00:52:03,355 | INFO     | . payload setup = 8 s
[2025-10-13 03:04:59] 2025-10-13 00:52:03,355 | INFO     | . stage-in = 0 s
[2025-10-13 03:04:59] 2025-10-13 00:52:03,355 | INFO     | . payload execution = 9001 s
[2025-10-13 03:04:59] 2025-10-13 00:52:03,355 | INFO     | . stage-out = 0 s
[2025-10-13 03:04:59] 2025-10-13 00:52:03,355 | INFO     | . log creation = 0 s
[2025-10-13 03:04:59] 2025-10-13 00:52:03,355 | INFO     | ..............................
[2025-10-13 03:04:59] 2025-10-13 00:52:03,456 | INFO     | 
[2025-10-13 03:04:59] 2025-10-13 00:52:03,457 | INFO     | job summary report
[2025-10-13 03:04:59] 2025-10-13 00:52:03,457 | INFO     | --------------------------------------------------
[2025-10-13 03:04:59] 2025-10-13 00:52:03,457 | INFO     | PanDA job id: 6838228138
[2025-10-13 03:04:59] 2025-10-13 00:52:03,457 | INFO     | task id: 46676269
[2025-10-13 03:04:59] 2025-10-13 00:52:03,457 | INFO     | errors: (none)
[2025-10-13 03:04:59] 2025-10-13 00:52:03,457 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 03:04:59] 2025-10-13 00:52:03,457 | INFO     | pilot state: finished 
[2025-10-13 03:04:59] 2025-10-13 00:52:03,457 | INFO     | transexitcode: 0
[2025-10-13 03:04:59] 2025-10-13 00:52:03,457 | INFO     | exeerrorcode: 0
[2025-10-13 03:04:59] 2025-10-13 00:52:03,458 | INFO     | exeerrordiag: 
[2025-10-13 03:04:59] 2025-10-13 00:52:03,458 | INFO     | exitcode: 0
[2025-10-13 03:04:59] 2025-10-13 00:52:03,458 | INFO     | exitmsg: OK
[2025-10-13 03:04:59] 2025-10-13 00:52:03,458 | INFO     | cpuconsumptiontime: 34361 s
[2025-10-13 03:04:59] 2025-10-13 00:52:03,458 | INFO     | nevents: 400
[2025-10-13 03:04:59] 2025-10-13 00:52:03,458 | INFO     | neventsw: 0
[2025-10-13 03:04:59] 2025-10-13 00:52:03,458 | INFO     | pid: 2572431
[2025-10-13 03:04:59] 2025-10-13 00:52:03,458 | INFO     | pgrp: 2572431
[2025-10-13 03:04:59] 2025-10-13 00:52:03,458 | INFO     | corecount: 4
[2025-10-13 03:04:59] 2025-10-13 00:52:03,458 | INFO     | event service: False
[2025-10-13 03:04:59] 2025-10-13 00:52:03,458 | INFO     | sizes: {0: 2348698, 1: 2348897, 6: 2349159, 11: 2349187, 9013: 2377891, 9015: 2386913, 9019: 2387097, 9028: 2387291}
[2025-10-13 03:04:59] 2025-10-13 00:52:03,458 | INFO     | --------------------------------------------------
[2025-10-13 03:04:59] 2025-10-13 00:52:03,459 | INFO     | 
[2025-10-13 03:04:59] 2025-10-13 00:52:03,459 | INFO     | executing command: ls -lF /scratch/boinc/var/slot128/slots/0
[2025-10-13 03:04:59] 2025-10-13 00:52:03,490 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 03:04:59] 2025-10-13 00:52:03,490 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 03:04:59] 2025-10-13 00:52:03,490 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 03:04:59] 2025-10-13 00:52:03,490 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 03:04:59] 2025-10-13 00:52:03,490 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 03:04:59] 2025-10-13 00:52:03,490 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 03:04:59] 2025-10-13 00:52:03,490 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 03:04:59] 2025-10-13 00:52:03,491 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 03:04:59] 2025-10-13 00:52:03,491 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 03:04:59] 2025-10-13 00:52:03,491 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 03:04:59] 2025-10-13 00:52:03,491 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 03:04:59] 2025-10-13 00:52:03,491 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 03:04:59] 2025-10-13 00:52:03,491 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 03:04:59] 2025-10-13 00:52:03,491 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 03:04:59] 2025-10-13 00:52:03,491 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 03:04:59] 2025-10-13 00:52:03,491 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 03:04:59] 2025-10-13 00:52:03,491 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 03:04:59] 2025-10-13 00:52:03,491 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 03:04:59] 2025-10-13 00:52:03,491 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 03:04:59] 2025-10-13 00:52:03,492 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 03:04:59] 2025-10-13 00:52:03,492 | INFO     | job 6838228138 has completed (purged errors)
[2025-10-13 03:04:59] 2025-10-13 00:52:03,492 | INFO     | overall cleanup function is called
[2025-10-13 03:04:59] 2025-10-13 00:52:04,501 | INFO     | --- collectZombieJob: --- 10, [2572431]
[2025-10-13 03:04:59] 2025-10-13 00:52:04,501 | INFO     | zombie collector waiting for pid 2572431
[2025-10-13 03:04:59] 2025-10-13 00:52:04,502 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 03:04:59] 2025-10-13 00:52:04,502 | INFO     | collected zombie processes
[2025-10-13 03:04:59] 2025-10-13 00:52:04,502 | INFO     | will attempt to kill all subprocesses of pid=2572431
[2025-10-13 03:04:59] 2025-10-13 00:52:05,246 | INFO     | process IDs to be killed: [2572431] (in reverse order)
[2025-10-13 03:04:59] 2025-10-13 00:52:05,497 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 03:04:59] 2025-10-13 00:52:05,497 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 03:04:59] 2025-10-13 00:52:05,528 | INFO     | did not find any defunct processes belonging to 2572431
[2025-10-13 03:04:59] 2025-10-13 00:52:05,558 | INFO     | did not find any defunct processes belonging to 2572431
[2025-10-13 03:04:59] 2025-10-13 00:52:05,558 | INFO     | ready for new job
[2025-10-13 03:04:59] 2025-10-13 00:52:05,558 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 03:04:59] 2025-10-13 00:52:05,561 | INFO     | ***************************************
[2025-10-13 03:04:59] 2025-10-13 00:52:05,561 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 03:04:59] 2025-10-13 00:52:05,561 | INFO     | ***************************************
[2025-10-13 03:04:59] 2025-10-13 00:52:05,561 | INFO     | 
[2025-10-13 03:04:59] 2025-10-13 00:52:05,570 | INFO     | architecture information:
[2025-10-13 03:04:59] 2025-10-13 00:52:05,570 | INFO     | executing command: cat /etc/os-release
[2025-10-13 03:04:59] 2025-10-13 00:52:05,595 | INFO     | cat /etc/os-release:
[2025-10-13 03:04:59] NAME="CentOS Linux"
[2025-10-13 03:04:59] VERSION="7 (Core)"
[2025-10-13 03:04:59] ID="centos"
[2025-10-13 03:04:59] ID_LIKE="rhel fedora"
[2025-10-13 03:04:59] VERSION_ID="7"
[2025-10-13 03:04:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 03:04:59] ANSI_COLOR="0;31"
[2025-10-13 03:04:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 03:04:59] HOME_URL="https://www.centos.org/"
[2025-10-13 03:04:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 03:04:59] 
[2025-10-13 03:04:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 03:04:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 03:04:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 03:04:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 03:04:59] 
[2025-10-13 03:04:59] 2025-10-13 00:52:05,596 | INFO     | ***************************************
[2025-10-13 03:04:59] 2025-10-13 00:52:06,099 | INFO     | executing command: df -mP /scratch/boinc/var/slot128/slots/0
[2025-10-13 03:04:59] 2025-10-13 00:52:06,124 | INFO     | sufficient remaining disk space (3337659351040 B)
[2025-10-13 03:04:59] 2025-10-13 00:52:06,124 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 03:04:59] 2025-10-13 00:52:06,124 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 03:04:59] 2025-10-13 00:52:06,124 | INFO     | update_server=False
[2025-10-13 03:04:59] 2025-10-13 00:52:06,125 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 03:04:59] 2025-10-13 00:52:06,125 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 03:04:59] 2025-10-13 00:52:06,297 | INFO     | all job control threads have been joined
[2025-10-13 03:04:59] 2025-10-13 00:52:06,489 | INFO     | all data control threads have been joined
[2025-10-13 03:04:59] 2025-10-13 00:52:06,632 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:04:59] 2025-10-13 00:52:06,633 | INFO     | aborting loop
[2025-10-13 03:04:59] 2025-10-13 00:52:06,686 | INFO     | all payload control threads have been joined
[2025-10-13 03:04:59] 2025-10-13 00:52:06,687 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 03:04:59] 2025-10-13 00:52:07,130 | INFO     | [job] retrieve thread has finished
[2025-10-13 03:04:59] 2025-10-13 00:52:07,275 | INFO     | [job] validate thread has finished
[2025-10-13 03:04:59] 2025-10-13 00:52:07,303 | INFO     | [job] control thread has finished
[2025-10-13 03:04:59] 2025-10-13 00:52:07,495 | INFO     | [data] control thread has finished
[2025-10-13 03:04:59] 2025-10-13 00:52:07,500 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 03:04:59] 2025-10-13 00:52:07,550 | INFO     | [data] copytool_in thread has finished
[2025-10-13 03:04:59] 2025-10-13 00:52:07,606 | INFO     | [payload] validate_post thread has finished
[2025-10-13 03:04:59] 2025-10-13 00:52:07,638 | INFO     | [job] job monitor thread has finished
[2025-10-13 03:04:59] 2025-10-13 00:52:07,691 | INFO     | [payload] control thread has finished
[2025-10-13 03:04:59] 2025-10-13 00:52:07,899 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 03:04:59] 2025-10-13 00:52:08,043 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 03:04:59] 2025-10-13 00:52:08,043 | INFO     | [payload] failed_post thread has finished
[2025-10-13 03:04:59] 2025-10-13 00:52:08,467 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:04:59] 2025-10-13 00:52:08,693 | INFO     | [data] copytool_out thread has finished
[2025-10-13 03:04:59] 2025-10-13 00:52:09,472 | INFO     | [job] queue monitor thread has finished
[2025-10-13 03:04:59] 2025-10-13 00:52:10,131 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 03:04:59] 2025-10-13 00:52:16,473 | INFO     | job.realtimelogging is not enabled
[2025-10-13 03:04:59] 2025-10-13 00:52:17,478 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 03:04:59] 2025-10-13 00:52:31,076 | INFO     | [monitor] cgroup control has ended
[2025-10-13 03:04:59] 2025-10-13 00:52:31,496 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23446432814912)>', '<ExcThread(monitor, started 23446190778112)>']
[2025-10-13 03:04:59] 2025-10-13 00:52:35,649 | INFO     | PID=2552282 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 03:04:59] 2025-10-13 00:52:35,649 | INFO     | .. there are 8 such processes running
[2025-10-13 03:04:59] 2025-10-13 00:52:35,650 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 03:04:59] 2025-10-13 00:52:35,650 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 03:04:59] 2025-10-13 00:52:35,650 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 03:04:59] 2025-10-13 00:52:35,650 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 03:04:59] 2025-10-13 00:52:35,650 | INFO     | [monitor] control thread has ended
[2025-10-13 03:04:59] 2025-10-13 00:52:36,522 | INFO     | all workflow threads have been joined
[2025-10-13 03:04:59] 2025-10-13 00:52:36,522 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 03:04:59] 2025-10-13 00:52:36,522 | INFO     | traces error code: 0
[2025-10-13 03:04:59] 2025-10-13 00:52:36,523 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 03:04:59] 2025-10-13 00:52:36,762 [wrapper] ==== pilot stdout END ====
[2025-10-13 03:04:59] 2025-10-13 00:52:36,766 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 03:04:59] 2025-10-13 00:52:36,771 [wrapper] pilotpid: 2552282
[2025-10-13 03:04:59] 2025-10-13 00:52:36,775 [wrapper] Pilot exit status: 0
[2025-10-13 03:04:59] 2025-10-13 00:52:36,789 [wrapper] pandaids: 6838228138
[2025-10-13 03:04:59] 2025-10-13 00:52:36,951 [wrapper] cleanup supervisor_pilot 2918590 2552283
[2025-10-13 03:04:59] 2025-10-13 00:52:36,955 [wrapper] Test setup, not cleaning
[2025-10-13 03:04:59] 2025-10-13 00:52:36,959 [wrapper] apfmon messages muted
[2025-10-13 03:04:59] 2025-10-13 00:52:36,962 [wrapper] ==== wrapper stdout END ====
[2025-10-13 03:04:59] 2025-10-13 00:52:36,965 [wrapper] ==== wrapper stderr END ====
[2025-10-13 03:04:59]  *** Error codes and diagnostics ***
[2025-10-13 03:04:59]     "exeErrorCode": 0,
[2025-10-13 03:04:59]     "exeErrorDiag": "",
[2025-10-13 03:04:59]     "pilotErrorCode": 0,
[2025-10-13 03:04:59]     "pilotErrorDiag": "",
[2025-10-13 03:04:59]  *** Listing of results directory ***
[2025-10-13 03:04:59] total 418780
[2025-10-13 03:04:59] -rw-r--r-- 1 boinc boinc    557409 Oct 11 09:58 pilot3.tar.gz
[2025-10-13 03:04:59] -rwx------ 1 boinc boinc     36292 Oct 11 10:12 runpilot2-wrapper.sh
[2025-10-13 03:04:59] -rw-r--r-- 1 boinc boinc      5112 Oct 11 10:12 queuedata.json
[2025-10-13 03:04:59] -rw-r--r-- 1 boinc boinc       100 Oct 13 00:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 03:04:59] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 00:20 run_atlas
[2025-10-13 03:04:59] -rw-r--r-- 1 boinc boinc       105 Oct 13 00:20 job.xml
[2025-10-13 03:04:59] -rw-r--r-- 2 boinc boinc 224039885 Oct 13 00:21 EVNT.46676267._002173.pool.root.1
[2025-10-13 03:04:59] -rw-r--r-- 1 boinc boinc      6689 Oct 13 00:21 init_data.xml
[2025-10-13 03:04:59] -rw-r--r-- 2 boinc boinc     15120 Oct 13 00:21 start_atlas.sh
[2025-10-13 03:04:59] drwxrwx--x 2 boinc boinc      4096 Oct 13 00:21 shared
[2025-10-13 03:04:59] -rw-r--r-- 2 boinc boinc    569677 Oct 13 00:21 input.tar.gz
[2025-10-13 03:04:59] -rw-r--r-- 1 boinc boinc         0 Oct 13 00:21 boinc_lockfile
[2025-10-13 03:04:59] -rw-r--r-- 1 boinc boinc      2550 Oct 13 00:21 pandaJob.out
[2025-10-13 03:04:59] -rw------- 1 boinc boinc    975603 Oct 13 00:21 agis_schedconf.cvmfs.json
[2025-10-13 03:04:59] -rw------- 1 boinc boinc   1560580 Oct 13 00:21 agis_ddmendpoints.agis.ALL.json
[2025-10-13 03:04:59] drwx------ 5 boinc boinc      4096 Oct 13 00:21 pilot3
[2025-10-13 03:04:59] -rw------- 1 boinc boinc 197665336 Oct 13 02:51 HITS.46676269._054173.pool.root.1
[2025-10-13 03:04:59] -rw-r--r-- 1 boinc boinc       528 Oct 13 02:51 boinc_task_state.xml
[2025-10-13 03:04:59] -rw------- 1 boinc boinc      1026 Oct 13 02:51 memory_monitor_summary.json
[2025-10-13 03:04:59] -rw------- 1 boinc boinc        95 Oct 13 02:51 pilot_heartbeat.json
[2025-10-13 03:04:59] -rw------- 1 boinc boinc    333312 Oct 13 02:51 log.46676269._054173.job.log.tgz.1
[2025-10-13 03:04:59] -rw------- 1 boinc boinc      7788 Oct 13 02:52 heartbeat.json
[2025-10-13 03:04:59] -rw------- 1 boinc boinc      4907 Oct 13 02:52 pilotlog.txt
[2025-10-13 03:04:59] -rw------- 1 boinc boinc   1273479 Oct 13 02:52 log.46676269._054173.job.log.1
[2025-10-13 03:04:59] -rw------- 1 boinc boinc       357 Oct 13 02:52 output.list
[2025-10-13 03:04:59] -rw-r--r-- 1 boinc boinc       620 Oct 13 02:52 runtime_log
[2025-10-13 03:04:59] -rw------- 1 boinc boinc   1628160 Oct 13 02:52 result.tar.gz
[2025-10-13 03:04:59] -rw-r--r-- 1 boinc boinc      9084 Oct 13 02:52 runtime_log.err
[2025-10-13 03:04:59] -rw------- 1 boinc boinc       662 Oct 13 02:52 5G1LDmFtjR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6qfNDmHijkGn.diag
[2025-10-13 03:04:59] -rw-r--r-- 1 boinc boinc        26 Oct 13 03:04 wrapper_checkpoint.txt
[2025-10-13 03:04:59] -rw-r--r-- 1 boinc boinc      8192 Oct 13 03:04 boinc_mmap_file
[2025-10-13 03:04:59] -rw-r--r-- 1 boinc boinc     20665 Oct 13 03:04 stderr.txt
[2025-10-13 03:04:59] HITS file was successfully produced:
[2025-10-13 03:04:59] -rw------- 1 boinc boinc 197665336 Oct 13 02:51 shared/HITS.pool.root.1
[2025-10-13 03:04:59]  *** Contents of shared directory: ***
[2025-10-13 03:04:59] total 414004
[2025-10-13 03:04:59] -rw-r--r-- 2 boinc boinc 224039885 Oct 13 00:21 ATLAS.root_0
[2025-10-13 03:04:59] -rw-r--r-- 2 boinc boinc     15120 Oct 13 00:21 start_atlas.sh
[2025-10-13 03:04:59] -rw-r--r-- 2 boinc boinc    569677 Oct 13 00:21 input.tar.gz
[2025-10-13 03:04:59] -rw------- 1 boinc boinc 197665336 Oct 13 02:51 HITS.pool.root.1
[2025-10-13 03:04:59] -rw------- 1 boinc boinc   1628160 Oct 13 02:52 result.tar.gz
03:05:00 (2545247): run_atlas exited; CPU time 34921.892547
03:05:00 (2545247): called boinc_finish(0)

</stderr_txt>
]]>

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