Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:24:56 (1871198): wrapper (7.7.26015): starting
06:24:56 (1871198): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 06:24:56] Arguments: --nthreads 12
[2025-10-11 06:24:56] Threads: 12
[2025-10-11 06:24:56] Checking for CVMFS
[2025-10-11 06:25:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 06:25:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 06:25:03] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 06:25:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 06:25:03] 2.8.1.0 1871508 0 29284 151581 3 1 2987179 4096000 0 130560 0 0 0.000 1292 367 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-11 06:25:03] CVMFS is ok
[2025-10-11 06:25:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 06:25:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 06:25:03] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-11 06:25:03] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-11 06:25:03] Further information can be found at the LHC@home message board.
[2025-10-11 06:25:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 06:25:03] Checking for apptainer binary...
[2025-10-11 06:25:03] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-10-11 06:25:03] apptainer is not installed, using version from CVMFS
[2025-10-11 06:25:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 06:25:04] farmville.blisteringsheep.pec
[2025-10-11 06:25:04] apptainer works
[2025-10-11 06:25:04] Set ATHENA_PROC_NUMBER=12
[2025-10-11 06:25:04] Set ATHENA_CORE_NUMBER=12
[2025-10-11 06:25:04] Starting ATLAS job with PandaID=6838116713
[2025-10-11 06:25:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/46 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 07:28:40]  *** The last 200 lines of the pilot log: ***
[2025-10-11 07:28:40]  scope=mc23_13p6TeV
[2025-10-11 07:28:40]  status=None
[2025-10-11 07:28:40]  status_code=0
[2025-10-11 07:28:40]  storage_token=
[2025-10-11 07:28:40]  surl=/var/lib/boinc/slots/46/PanDA_Pilot-6838116713/log.46676269._051590.job.log.tgz.1
[2025-10-11 07:28:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a6/e6/log.46676269._051590.job.log.tgz.1
[2025-10-11 07:28:40]  workdir=None
[2025-10-11 07:28:40] ]
[2025-10-11 07:28:40] 2025-10-11 11:28:01,640 | INFO     | transferring file log.46676269._051590.job.log.tgz.1 from /var/lib/boinc/slots/46/PanDA_Pilot-6838116713/log.46676269._051590.job.log.tgz.1 to /var/lib/boinc/slots
[2025-10-11 07:28:40] 2025-10-11 11:28:01,640 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/46/PanDA_Pilot-6838116713/log.46676269._051590.job.log.tgz.1 /var/lib/boinc/slots/46/log.46676269._051590.j
[2025-10-11 07:28:40] 2025-10-11 11:28:01,657 | INFO     | adding to output.list: log.46676269._051590.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a6/e6/log.46676269._051590.job.log.tg
[2025-10-11 07:28:40] 2025-10-11 11:28:01,658 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 07:28:40] 2025-10-11 11:28:01,658 | INFO     | summary of transferred files:
[2025-10-11 07:28:40] 2025-10-11 11:28:01,658 | INFO     |  -- lfn=log.46676269._051590.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 07:28:40] 2025-10-11 11:28:01,658 | INFO     | stage-out finished correctly
[2025-10-11 07:28:40] 2025-10-11 11:28:01,870 | INFO     | PID=1875997 has CPU usage=9.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 07:28:40] 2025-10-11 11:28:02,757 | INFO     | monitor loop #281: job 0:6838116713 is in state 'finished'
[2025-10-11 07:28:40] 2025-10-11 11:28:02,758 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 07:28:40] 2025-10-11 11:28:02,870 | INFO     | time since job start (3761s) is within the limit (172800.0s)
[2025-10-11 07:28:40] 2025-10-11 11:28:03,508 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 07:28:40] 2025-10-11 11:28:04,876 | INFO     | time since job start (3763s) is within the limit (172800.0s)
[2025-10-11 07:28:40] 2025-10-11 11:28:04,884 | INFO     | job 6838116713 has state=finished
[2025-10-11 07:28:40] 2025-10-11 11:28:04,884 | INFO     | preparing for final server update for job 6838116713 in state='finished'
[2025-10-11 07:28:40] 2025-10-11 11:28:04,884 | INFO     | this job has now completed (state=finished)
[2025-10-11 07:28:40] 2025-10-11 11:28:04,884 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 07:28:40] 2025-10-11 11:28:04,885 | INFO     | log transfer has been attempted: DONE
[2025-10-11 07:28:40] 2025-10-11 11:28:04,885 | INFO     | job 6838116713 has finished - writing final server update
[2025-10-11 07:28:40] 2025-10-11 11:28:04,885 | INFO     | total number of processed events: 400 (read)
[2025-10-11 07:28:40] 2025-10-11 11:28:04,885 | INFO     | executing command: lscpu
[2025-10-11 07:28:40] 2025-10-11 11:28:04,920 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 07:28:40] 2025-10-11 11:28:05,262 | INFO     | monitor loop #282: job 0:6838116713 is in state 'finished'
[2025-10-11 07:28:40] 2025-10-11 11:28:05,263 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 07:28:40] 2025-10-11 11:28:06,882 | INFO     | time since job start (3765s) is within the limit (172800.0s)
[2025-10-11 07:28:40] 2025-10-11 11:28:07,767 | INFO     | monitor loop #283: job 0:6838116713 is in state 'finished'
[2025-10-11 07:28:40] 2025-10-11 11:28:07,767 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 07:28:40] 2025-10-11 11:28:07,987 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 07:28:40] 2025-10-11 11:28:07,991 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2849.7225625000005
[2025-10-11 07:28:40] 2025-10-11 11:28:07,996 | INFO     | using path: /var/lib/boinc/slots/46/PanDA_Pilot-6838116713/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 07:28:40] 2025-10-11 11:28:07,996 | INFO     | extracted standard info from prmon json
[2025-10-11 07:28:40] 2025-10-11 11:28:07,996 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 07:28:40] 2025-10-11 11:28:07,997 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 07:28:40] 2025-10-11 11:28:07,997 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 07:28:40] 2025-10-11 11:28:07,997 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 07:28:40] 2025-10-11 11:28:07,998 | INFO     | fitting pss+swap vs Time
[2025-10-11 07:28:40] 2025-10-11 11:28:07,998 | INFO     | sum of square deviations: 51573060.0
[2025-10-11 07:28:40] 2025-10-11 11:28:07,998 | INFO     | sum of deviations: -6102464644.000001
[2025-10-11 07:28:40] 2025-10-11 11:28:07,998 | INFO     | mean x: 1760180297.0
[2025-10-11 07:28:40] 2025-10-11 11:28:07,998 | INFO     | mean y: 3038294.018181818
[2025-10-11 07:28:40] 2025-10-11 11:28:07,998 | INFO     | -- intersect: 208279181487.92447
[2025-10-11 07:28:40] 2025-10-11 11:28:07,998 | INFO     | intersect: 208279181487.92447
[2025-10-11 07:28:40] 2025-10-11 11:28:07,999 | INFO     | chi2: 0.09745881366217636
[2025-10-11 07:28:40] 2025-10-11 11:28:07,999 | INFO     | -- intersect: 208279181487.92447
[2025-10-11 07:28:40] 2025-10-11 11:28:07,999 | INFO     | current memory leak: -118.33 B/s (using 55 data points, chi2=0.10)
[2025-10-11 07:28:40] 2025-10-11 11:28:07,999 | INFO     | could have reported an average CPU frequency of 2943 MHz (6 samples)
[2025-10-11 07:28:40] 2025-10-11 11:28:07,999 | INFO     | ..............................
[2025-10-11 07:28:40] 2025-10-11 11:28:07,999 | INFO     | . Timing measurements:
[2025-10-11 07:28:40] 2025-10-11 11:28:07,999 | INFO     | . get job = 0 s
[2025-10-11 07:28:40] 2025-10-11 11:28:07,999 | INFO     | . initial setup = 3 s
[2025-10-11 07:28:40] 2025-10-11 11:28:07,999 | INFO     | . payload setup = 5 s
[2025-10-11 07:28:40] 2025-10-11 11:28:07,999 | INFO     | . stage-in = 0 s
[2025-10-11 07:28:40] 2025-10-11 11:28:07,999 | INFO     | . payload execution = 3736 s
[2025-10-11 07:28:40] 2025-10-11 11:28:07,999 | INFO     | . stage-out = 0 s
[2025-10-11 07:28:40] 2025-10-11 11:28:08,000 | INFO     | . log creation = 0 s
[2025-10-11 07:28:40] 2025-10-11 11:28:08,000 | INFO     | ..............................
[2025-10-11 07:28:40] 2025-10-11 11:28:08,084 | INFO     | 
[2025-10-11 07:28:40] 2025-10-11 11:28:08,085 | INFO     | job summary report
[2025-10-11 07:28:40] 2025-10-11 11:28:08,085 | INFO     | --------------------------------------------------
[2025-10-11 07:28:40] 2025-10-11 11:28:08,085 | INFO     | PanDA job id: 6838116713
[2025-10-11 07:28:40] 2025-10-11 11:28:08,085 | INFO     | task id: 46676269
[2025-10-11 07:28:40] 2025-10-11 11:28:08,085 | INFO     | errors: (none)
[2025-10-11 07:28:40] 2025-10-11 11:28:08,085 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 07:28:40] 2025-10-11 11:28:08,086 | INFO     | pilot state: finished 
[2025-10-11 07:28:40] 2025-10-11 11:28:08,086 | INFO     | transexitcode: 0
[2025-10-11 07:28:40] 2025-10-11 11:28:08,086 | INFO     | exeerrorcode: 0
[2025-10-11 07:28:40] 2025-10-11 11:28:08,086 | INFO     | exeerrordiag: 
[2025-10-11 07:28:40] 2025-10-11 11:28:08,086 | INFO     | exitcode: 0
[2025-10-11 07:28:40] 2025-10-11 11:28:08,086 | INFO     | exitmsg: OK
[2025-10-11 07:28:40] 2025-10-11 11:28:08,086 | INFO     | cpuconsumptiontime: 40044 s
[2025-10-11 07:28:40] 2025-10-11 11:28:08,086 | INFO     | nevents: 400
[2025-10-11 07:28:40] 2025-10-11 11:28:08,086 | INFO     | neventsw: 0
[2025-10-11 07:28:40] 2025-10-11 11:28:08,086 | INFO     | pid: 1883207
[2025-10-11 07:28:40] 2025-10-11 11:28:08,087 | INFO     | pgrp: 1883207
[2025-10-11 07:28:40] 2025-10-11 11:28:08,087 | INFO     | corecount: 12
[2025-10-11 07:28:40] 2025-10-11 11:28:08,087 | INFO     | event service: False
[2025-10-11 07:28:40] 2025-10-11 11:28:08,087 | INFO     | sizes: {0: 2348630, 1: 2348885, 5: 2349147, 12: 2349203, 3745: 2374998, 3746: 2383998, 3748: 2384182, 3752: 2384376}
[2025-10-11 07:28:40] 2025-10-11 11:28:08,087 | INFO     | --------------------------------------------------
[2025-10-11 07:28:40] 2025-10-11 11:28:08,087 | INFO     | 
[2025-10-11 07:28:40] 2025-10-11 11:28:08,087 | INFO     | executing command: ls -lF /var/lib/boinc/slots/46
[2025-10-11 07:28:40] 2025-10-11 11:28:08,112 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 07:28:40] 2025-10-11 11:28:08,112 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 07:28:40] 2025-10-11 11:28:08,112 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 07:28:40] 2025-10-11 11:28:08,112 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 07:28:40] 2025-10-11 11:28:08,113 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 07:28:40] 2025-10-11 11:28:08,113 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 07:28:40] 2025-10-11 11:28:08,113 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 07:28:40] 2025-10-11 11:28:08,113 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 07:28:40] 2025-10-11 11:28:08,113 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 07:28:40] 2025-10-11 11:28:08,113 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 07:28:40] 2025-10-11 11:28:08,113 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 07:28:40] 2025-10-11 11:28:08,113 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 07:28:40] 2025-10-11 11:28:08,113 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 07:28:40] 2025-10-11 11:28:08,113 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 07:28:40] 2025-10-11 11:28:08,113 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 07:28:40] 2025-10-11 11:28:08,114 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 07:28:40] 2025-10-11 11:28:08,114 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 07:28:40] 2025-10-11 11:28:08,114 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 07:28:40] 2025-10-11 11:28:08,114 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 07:28:40] 2025-10-11 11:28:08,114 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 07:28:40] 2025-10-11 11:28:08,114 | INFO     | job 6838116713 has completed (purged errors)
[2025-10-11 07:28:40] 2025-10-11 11:28:08,114 | INFO     | overall cleanup function is called
[2025-10-11 07:28:40] 2025-10-11 11:28:09,123 | INFO     | --- collectZombieJob: --- 10, [1883207]
[2025-10-11 07:28:40] 2025-10-11 11:28:09,124 | INFO     | zombie collector waiting for pid 1883207
[2025-10-11 07:28:40] 2025-10-11 11:28:09,124 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 07:28:40] 2025-10-11 11:28:09,124 | INFO     | collected zombie processes
[2025-10-11 07:28:40] 2025-10-11 11:28:09,124 | INFO     | will attempt to kill all subprocesses of pid=1883207
[2025-10-11 07:28:40] 2025-10-11 11:28:09,363 | INFO     | process IDs to be killed: [1883207] (in reverse order)
[2025-10-11 07:28:40] 2025-10-11 11:28:09,467 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 07:28:40] 2025-10-11 11:28:09,467 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 07:28:40] 2025-10-11 11:28:09,475 | INFO     | did not find any defunct processes belonging to 1883207
[2025-10-11 07:28:40] 2025-10-11 11:28:09,482 | INFO     | did not find any defunct processes belonging to 1883207
[2025-10-11 07:28:40] 2025-10-11 11:28:09,482 | INFO     | ready for new job
[2025-10-11 07:28:40] 2025-10-11 11:28:09,482 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 07:28:40] 2025-10-11 11:28:09,484 | INFO     | ***************************************
[2025-10-11 07:28:40] 2025-10-11 11:28:09,484 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 07:28:40] 2025-10-11 11:28:09,484 | INFO     | ***************************************
[2025-10-11 07:28:40] 2025-10-11 11:28:09,484 | INFO     | 
[2025-10-11 07:28:40] 2025-10-11 11:28:09,487 | INFO     | architecture information:
[2025-10-11 07:28:40] 2025-10-11 11:28:09,487 | INFO     | executing command: cat /etc/os-release
[2025-10-11 07:28:40] 2025-10-11 11:28:09,502 | INFO     | cat /etc/os-release:
[2025-10-11 07:28:40] NAME="CentOS Linux"
[2025-10-11 07:28:40] VERSION="7 (Core)"
[2025-10-11 07:28:40] ID="centos"
[2025-10-11 07:28:40] ID_LIKE="rhel fedora"
[2025-10-11 07:28:40] VERSION_ID="7"
[2025-10-11 07:28:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 07:28:40] ANSI_COLOR="0;31"
[2025-10-11 07:28:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 07:28:40] HOME_URL="https://www.centos.org/"
[2025-10-11 07:28:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 07:28:40] 
[2025-10-11 07:28:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 07:28:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 07:28:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 07:28:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 07:28:40] 
[2025-10-11 07:28:40] 2025-10-11 11:28:09,502 | INFO     | ***************************************
[2025-10-11 07:28:40] 2025-10-11 11:28:10,005 | INFO     | executing command: df -mP /var/lib/boinc/slots/46
[2025-10-11 07:28:40] 2025-10-11 11:28:10,020 | INFO     | sufficient remaining disk space (399699345408 B)
[2025-10-11 07:28:40] 2025-10-11 11:28:10,021 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 07:28:40] 2025-10-11 11:28:10,021 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 07:28:40] 2025-10-11 11:28:10,021 | INFO     | update_server=False
[2025-10-11 07:28:40] 2025-10-11 11:28:10,021 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 07:28:40] 2025-10-11 11:28:10,021 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 07:28:40] 2025-10-11 11:28:10,021 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 07:28:40] 2025-10-11 11:28:10,022 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 07:28:40] 2025-10-11 11:28:10,270 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 07:28:40] 2025-10-11 11:28:10,271 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 07:28:40] 2025-10-11 11:28:10,271 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 07:28:40] 2025-10-11 11:28:10,271 | INFO     | will abort loop
[2025-10-11 07:28:40] 2025-10-11 11:28:10,826 | INFO     | all payload control threads have been joined
[2025-10-11 07:28:40] 2025-10-11 11:28:11,018 | INFO     | all data control threads have been joined
[2025-10-11 07:28:40] 2025-10-11 11:28:11,019 | INFO     | all job control threads have been joined
[2025-10-11 07:28:40] 2025-10-11 11:28:11,026 | INFO     | [job] retrieve thread has finished
[2025-10-11 07:28:40] 2025-10-11 11:28:11,026 | INFO     | [job] queue monitor thread has finished
[2025-10-11 07:28:40] 2025-10-11 11:28:11,191 | INFO     | [data] copytool_in thread has finished
[2025-10-11 07:28:40] 2025-10-11 11:28:11,274 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 07:28:40] 2025-10-11 11:28:11,276 | INFO     | [job] job monitor thread has finished
[2025-10-11 07:28:40] 2025-10-11 11:28:11,285 | INFO     | [payload] validate_post thread has finished
[2025-10-11 07:28:40] 2025-10-11 11:28:11,477 | INFO     | [job] validate thread has finished
[2025-10-11 07:28:40] 2025-10-11 11:28:11,644 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 07:28:40] 2025-10-11 11:28:11,753 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 07:28:40] 2025-10-11 11:28:11,831 | INFO     | [payload] control thread has finished
[2025-10-11 07:28:40] 2025-10-11 11:28:12,023 | INFO     | [data] control thread has finished
[2025-10-11 07:28:40] 2025-10-11 11:28:12,024 | INFO     | [job] control thread has finished
[2025-10-11 07:28:40] 2025-10-11 11:28:12,026 | INFO     | [data] copytool_out thread has finished
[2025-10-11 07:28:40] 2025-10-11 11:28:12,132 | INFO     | [payload] failed_post thread has finished
[2025-10-11 07:28:40] 2025-10-11 11:28:12,180 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 07:28:40] 2025-10-11 11:28:14,024 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 07:28:40] 2025-10-11 11:28:26,849 | INFO     | [monitor] cgroup control has ended
[2025-10-11 07:28:40] 2025-10-11 11:28:28,786 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140350507226944)>', '<ExcThread(monitor, started 140349968201472)>']
[2025-10-11 07:28:40] 2025-10-11 11:28:33,808 | INFO     | all workflow threads have been joined
[2025-10-11 07:28:40] 2025-10-11 11:28:33,808 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 07:28:40] 2025-10-11 11:28:33,809 | INFO     | traces error code: 0
[2025-10-11 07:28:40] 2025-10-11 11:28:33,809 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 07:28:40] 2025-10-11 11:28:40,212 | INFO     | PID=1875997 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 07:28:40] 2025-10-11 11:28:40,213 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 07:28:40] 2025-10-11 11:28:40,213 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 07:28:40] 2025-10-11 11:28:40,213 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 07:28:40] 2025-10-11 11:28:40,213 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 07:28:40] 2025-10-11 11:28:40,213 | INFO     | [monitor] control thread has ended
[2025-10-11 07:28:40] 2025-10-11 11:28:40,340 [wrapper] ==== pilot stdout END ====
[2025-10-11 07:28:40] 2025-10-11 11:28:40,342 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 07:28:40] 2025-10-11 11:28:40,344 [wrapper] pilotpid: 1875997
[2025-10-11 07:28:40] 2025-10-11 11:28:40,346 [wrapper] Pilot exit status: 0
[2025-10-11 07:28:40] 2025-10-11 11:28:40,352 [wrapper] pandaids: 6838116713
[2025-10-11 07:28:40] 2025-10-11 11:28:40,393 [wrapper] cleanup supervisor_pilot 1961045 1875998
[2025-10-11 07:28:40] 2025-10-11 11:28:40,395 [wrapper] Test setup, not cleaning
[2025-10-11 07:28:40] 2025-10-11 11:28:40,397 [wrapper] apfmon messages muted
[2025-10-11 07:28:40] 2025-10-11 11:28:40,399 [wrapper] ==== wrapper stdout END ====
[2025-10-11 07:28:40] 2025-10-11 11:28:40,402 [wrapper] ==== wrapper stderr END ====
[2025-10-11 07:28:40]  *** Error codes and diagnostics ***
[2025-10-11 07:28:40]     "exeErrorCode": 0,
[2025-10-11 07:28:40]     "exeErrorDiag": "",
[2025-10-11 07:28:40]     "pilotErrorCode": 0,
[2025-10-11 07:28:40]     "pilotErrorDiag": "",
[2025-10-11 07:28:40]  *** Listing of results directory ***
[2025-10-11 07:28:40] total 415956
[2025-10-11 07:28:40] -rw-r--r-- 1 boinc boinc    557409 Oct 11 00:32 pilot3.tar.gz
[2025-10-11 07:28:40] -rw-r--r-- 1 boinc boinc      5112 Oct 11 01:03 queuedata.json
[2025-10-11 07:28:40] -rwx------ 1 boinc boinc     36292 Oct 11 01:04 runpilot2-wrapper.sh
[2025-10-11 07:28:40] -rw-r--r-- 1 boinc boinc       100 Oct 11 06:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 07:28:40] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 06:24 run_atlas
[2025-10-11 07:28:40] -rw-r--r-- 1 boinc boinc       105 Oct 11 06:24 job.xml
[2025-10-11 07:28:40] -rw-r--r-- 2 boinc boinc 222666962 Oct 11 06:24 EVNT.46676267._002073.pool.root.1
[2025-10-11 07:28:40] drwxrwx--x 1 boinc boinc        76 Oct 11 06:24 shared
[2025-10-11 07:28:40] -rw-r--r-- 2 boinc boinc    569685 Oct 11 06:24 input.tar.gz
[2025-10-11 07:28:40] -rw-r--r-- 2 boinc boinc     15120 Oct 11 06:24 start_atlas.sh
[2025-10-11 07:28:40] -rw-r--r-- 1 boinc boinc         0 Oct 11 06:24 boinc_setup_complete
[2025-10-11 07:28:40] -rw-r--r-- 1 boinc boinc      9182 Oct 11 06:24 init_data.xml
[2025-10-11 07:28:40] -rw-r--r-- 1 boinc boinc         0 Oct 11 06:24 boinc_lockfile
[2025-10-11 07:28:40] -rw-r--r-- 1 boinc boinc      2549 Oct 11 06:25 pandaJob.out
[2025-10-11 07:28:40] -rw------- 1 boinc boinc    975517 Oct 11 06:25 agis_schedconf.cvmfs.json
[2025-10-11 07:28:40] -rw------- 1 boinc boinc   1560580 Oct 11 06:25 agis_ddmendpoints.agis.ALL.json
[2025-10-11 07:28:40] drwx------ 1 boinc boinc       414 Oct 11 06:25 pilot3
[2025-10-11 07:28:40] -rw------- 1 boinc boinc 197495583 Oct 11 07:27 HITS.46676269._051590.pool.root.1
[2025-10-11 07:28:40] -rw-r--r-- 1 boinc boinc       529 Oct 11 07:27 boinc_task_state.xml
[2025-10-11 07:28:40] -rw------- 1 boinc boinc      1041 Oct 11 07:27 memory_monitor_summary.json
[2025-10-11 07:28:40] -rw------- 1 boinc boinc    387272 Oct 11 07:28 log.46676269._051590.job.log.tgz.1
[2025-10-11 07:28:40] -rw------- 1 boinc boinc      7843 Oct 11 07:28 heartbeat.json
[2025-10-11 07:28:40] -rw-r--r-- 1 boinc boinc      8192 Oct 11 07:28 boinc_mmap_file
[2025-10-11 07:28:40] -rw-r--r-- 1 boinc boinc        27 Oct 11 07:28 wrapper_checkpoint.txt
[2025-10-11 07:28:40] -rw------- 1 boinc boinc       747 Oct 11 07:28 pilotlog.txt
[2025-10-11 07:28:40] -rw------- 1 boinc boinc        95 Oct 11 07:28 pilot_heartbeat.json
[2025-10-11 07:28:40] -rw------- 1 boinc boinc    557452 Oct 11 07:28 log.46676269._051590.job.log.1
[2025-10-11 07:28:40] -rw------- 1 boinc boinc       357 Oct 11 07:28 output.list
[2025-10-11 07:28:40] -rw-r--r-- 1 boinc boinc       620 Oct 11 07:28 runtime_log
[2025-10-11 07:28:40] -rw------- 1 boinc boinc    962560 Oct 11 07:28 result.tar.gz
[2025-10-11 07:28:40] -rw-r--r-- 1 boinc boinc      8804 Oct 11 07:28 runtime_log.err
[2025-10-11 07:28:40] -rw------- 1 boinc boinc       674 Oct 11 07:28 cvUKDm0xgR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmcGRMDmrLt3im.diag
[2025-10-11 07:28:40] -rw-r--r-- 1 boinc boinc     22367 Oct 11 07:28 stderr.txt
[2025-10-11 07:28:40] HITS file was successfully produced:
[2025-10-11 07:28:40] -rw------- 1 boinc boinc 197495583 Oct 11 07:27 shared/HITS.pool.root.1
[2025-10-11 07:28:40]  *** Contents of shared directory: ***
[2025-10-11 07:28:40] total 411836
[2025-10-11 07:28:40] -rw-r--r-- 2 boinc boinc 222666962 Oct 11 06:24 ATLAS.root_0
[2025-10-11 07:28:40] -rw-r--r-- 2 boinc boinc    569685 Oct 11 06:24 input.tar.gz
[2025-10-11 07:28:40] -rw-r--r-- 2 boinc boinc     15120 Oct 11 06:24 start_atlas.sh
[2025-10-11 07:28:40] -rw------- 1 boinc boinc 197495583 Oct 11 07:27 HITS.pool.root.1
[2025-10-11 07:28:40] -rw------- 1 boinc boinc    962560 Oct 11 07:28 result.tar.gz
07:28:41 (1871198): run_atlas exited; CPU time 40134.382612
07:28:41 (1871198): called boinc_finish(0)

</stderr_txt>
]]>

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