Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:28:17 (532627): wrapper (7.7.26015): starting
04:28:17 (532627): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 04:28:17] Arguments: --nthreads 3
[2025-10-13 04:28:17] Threads: 3
[2025-10-13 04:28:17] Checking for CVMFS
[2025-10-13 04:28:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 04:28:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 04:28:58] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 04:28:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 04:28:59] 2.11.5.0 532845 0 30856 151635 3 1 13580502 15728640 0 130560 0 0 0.000 1293 61 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-13 04:28:59] CVMFS is ok
[2025-10-13 04:28:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 04:28:59] Checking for apptainer binary...
[2025-10-13 04:28:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 04:28:59] Running /usr/bin/apptainer --version
[2025-10-13 04:28:59] apptainer version 1.3.4-1.el9
[2025-10-13 04:28:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 04:28:59] testio003
[2025-10-13 04:28:59] apptainer works
[2025-10-13 04:28:59] Set ATHENA_PROC_NUMBER=3
[2025-10-13 04:28:59] Set ATHENA_CORE_NUMBER=3
[2025-10-13 04:28:59] Starting ATLAS job with PandaID=6839973977
[2025-10-13 04:28:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:01:51]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:01:51] 2025-10-12 22:01:16,937 | INFO     | PID=536920 has CPU usage=0.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 07:01:51] 2025-10-12 22:01:17,649 | INFO     | monitor loop #695: job 0:6839973977 is in state 'finished'
[2025-10-13 07:01:51] 2025-10-12 22:01:17,649 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 07:01:51] 2025-10-12 22:01:17,937 | INFO     | time since job start (9050s) is within the limit (172800.0s)
[2025-10-13 07:01:51] 2025-10-12 22:01:18,798 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 07:01:51] 2025-10-12 22:01:18,798 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 3542.22225
[2025-10-13 07:01:51] 2025-10-12 22:01:18,799 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6839973977/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 07:01:51] 2025-10-12 22:01:18,799 | INFO     | extracted standard info from prmon json
[2025-10-13 07:01:51] 2025-10-12 22:01:18,800 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 07:01:51] 2025-10-12 22:01:18,800 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 07:01:51] 2025-10-12 22:01:18,800 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 07:01:51] 2025-10-12 22:01:18,800 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 07:01:51] 2025-10-12 22:01:18,801 | INFO     | fitting pss+swap vs Time
[2025-10-13 07:01:51] 2025-10-12 22:01:18,801 | INFO     | sum of square deviations: 984941258.0
[2025-10-13 07:01:51] 2025-10-12 22:01:18,801 | INFO     | sum of deviations: -18980866871.999996
[2025-10-13 07:01:51] 2025-10-12 22:01:18,802 | INFO     | mean x: 1760301904.0
[2025-10-13 07:01:51] 2025-10-12 22:01:18,802 | INFO     | mean y: 2411919.3401360544
[2025-10-13 07:01:51] 2025-10-12 22:01:18,802 | INFO     | -- intersect: 33925304094.85719
[2025-10-13 07:01:51] 2025-10-12 22:01:18,802 | INFO     | intersect: 33925304094.85719
[2025-10-13 07:01:51] 2025-10-12 22:01:18,802 | INFO     | chi2: 2.2327156582094116
[2025-10-13 07:01:51] 2025-10-12 22:01:18,802 | INFO     | sum of square deviations: 887813855.5
[2025-10-13 07:01:51] 2025-10-12 22:01:18,802 | INFO     | sum of deviations: -17629899170.50002
[2025-10-13 07:01:51] 2025-10-12 22:01:18,802 | INFO     | mean x: 1760301751.5
[2025-10-13 07:01:51] 2025-10-12 22:01:18,802 | INFO     | mean y: 2414041.3169014086
[2025-10-13 07:01:51] 2025-10-12 22:01:18,802 | INFO     | -- intersect: 34957874801.86321
[2025-10-13 07:01:51] 2025-10-12 22:01:18,802 | INFO     | intersect: 34957874801.86321
[2025-10-13 07:01:51] 2025-10-12 22:01:18,802 | INFO     | chi2: 2.229481574415974
[2025-10-13 07:01:51] 2025-10-12 22:01:18,803 | INFO     | current chi2=2.229481574415974 (change=0.14484978333654652 %)
[2025-10-13 07:01:51] 2025-10-12 22:01:18,803 | INFO     | right removable region: 141
[2025-10-13 07:01:51] 2025-10-12 22:01:18,803 | INFO     | sum of square deviations: 887813855.5
[2025-10-13 07:01:51] 2025-10-12 22:01:18,803 | INFO     | sum of deviations: -46165058487.49999
[2025-10-13 07:01:51] 2025-10-12 22:01:18,803 | INFO     | mean x: 1760302056.5
[2025-10-13 07:01:51] 2025-10-12 22:01:18,803 | INFO     | mean y: 2454191.4295774647
[2025-10-13 07:01:51] 2025-10-12 22:01:18,803 | INFO     | -- intersect: 91535658917.34863
[2025-10-13 07:01:51] 2025-10-12 22:01:18,803 | INFO     | intersect: 91535658917.34863
[2025-10-13 07:01:51] 2025-10-12 22:01:18,803 | INFO     | chi2: 0.3087607099118632
[2025-10-13 07:01:51] 2025-10-12 22:01:18,803 | INFO     | current chi2=0.3087607099118632 (change=86.1710689054117 %)
[2025-10-13 07:01:51] 2025-10-12 22:01:18,803 | INFO     | sum of square deviations: 797291228.0
[2025-10-13 07:01:51] 2025-10-12 22:01:18,804 | INFO     | sum of deviations: -41104794917.0
[2025-10-13 07:01:51] 2025-10-12 22:01:18,804 | INFO     | mean x: 1760302209.0
[2025-10-13 07:01:51] 2025-10-12 22:01:18,804 | INFO     | mean y: 2445635.2189781023
[2025-10-13 07:01:51] 2025-10-12 22:01:18,804 | INFO     | -- intersect: 90755809966.58607
[2025-10-13 07:01:51] 2025-10-12 22:01:18,804 | INFO     | intersect: 90755809966.58607
[2025-10-13 07:01:51] 2025-10-12 22:01:18,804 | INFO     | chi2: 0.3066199979842463
[2025-10-13 07:01:51] 2025-10-12 22:01:18,804 | INFO     | current chi2=0.3066199979842463 (change=0.6933239427477733 %)
[2025-10-13 07:01:51] 2025-10-12 22:01:18,804 | INFO     | left removable region: 20
[2025-10-13 07:01:51] 2025-10-12 22:01:18,804 | INFO     | sum of square deviations: 549294020.0
[2025-10-13 07:01:51] 2025-10-12 22:01:18,804 | INFO     | sum of deviations: -27207866722.000004
[2025-10-13 07:01:51] 2025-10-12 22:01:18,804 | INFO     | mean x: 1760302331.0
[2025-10-13 07:01:51] 2025-10-12 22:01:18,805 | INFO     | mean y: 2426038.0165289254
[2025-10-13 07:01:51] 2025-10-12 22:01:18,805 | INFO     | -- intersect: 87194475229.22006
[2025-10-13 07:01:51] 2025-10-12 22:01:18,805 | INFO     | intersect: 87194475229.22006
[2025-10-13 07:01:51] 2025-10-12 22:01:18,805 | INFO     | chi2: 0.27737003810420324
[2025-10-13 07:01:51] 2025-10-12 22:01:18,805 | INFO     | -- intersect: 87194475229.22006
[2025-10-13 07:01:51] 2025-10-12 22:01:18,805 | INFO     | current memory leak: -49.53 B/s (using 121 data points, chi2=0.28)
[2025-10-13 07:01:51] 2025-10-12 22:01:18,805 | INFO     | could have reported an average CPU frequency of 3562 MHz (8 samples)
[2025-10-13 07:01:51] 2025-10-12 22:01:18,805 | INFO     | ..............................
[2025-10-13 07:01:51] 2025-10-12 22:01:18,805 | INFO     | . Timing measurements:
[2025-10-13 07:01:51] 2025-10-12 22:01:18,805 | INFO     | . get job = 0 s
[2025-10-13 07:01:51] 2025-10-12 22:01:18,805 | INFO     | . initial setup = 9 s
[2025-10-13 07:01:51] 2025-10-12 22:01:18,805 | INFO     | . payload setup = 5 s
[2025-10-13 07:01:51] 2025-10-12 22:01:18,805 | INFO     | . stage-in = 0 s
[2025-10-13 07:01:51] 2025-10-12 22:01:18,805 | INFO     | . payload execution = 8946 s
[2025-10-13 07:01:51] 2025-10-12 22:01:18,805 | INFO     | . stage-out = 0 s
[2025-10-13 07:01:51] 2025-10-12 22:01:18,805 | INFO     | . log creation = 0 s
[2025-10-13 07:01:51] 2025-10-12 22:01:18,805 | INFO     | ..............................
[2025-10-13 07:01:51] 2025-10-12 22:01:18,842 | INFO     | 
[2025-10-13 07:01:51] 2025-10-12 22:01:18,842 | INFO     | job summary report
[2025-10-13 07:01:51] 2025-10-12 22:01:18,842 | INFO     | --------------------------------------------------
[2025-10-13 07:01:51] 2025-10-12 22:01:18,842 | INFO     | PanDA job id: 6839973977
[2025-10-13 07:01:51] 2025-10-12 22:01:18,842 | INFO     | task id: 46373048
[2025-10-13 07:01:51] 2025-10-12 22:01:18,842 | INFO     | errors: (none)
[2025-10-13 07:01:51] 2025-10-12 22:01:18,842 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:01:51] 2025-10-12 22:01:18,842 | INFO     | pilot state: finished 
[2025-10-13 07:01:51] 2025-10-12 22:01:18,842 | INFO     | transexitcode: 0
[2025-10-13 07:01:51] 2025-10-12 22:01:18,843 | INFO     | exeerrorcode: 0
[2025-10-13 07:01:51] 2025-10-12 22:01:18,843 | INFO     | exeerrordiag: 
[2025-10-13 07:01:51] 2025-10-12 22:01:18,843 | INFO     | exitcode: 0
[2025-10-13 07:01:51] 2025-10-12 22:01:18,843 | INFO     | exitmsg: OK
[2025-10-13 07:01:51] 2025-10-12 22:01:18,843 | INFO     | cpuconsumptiontime: 25487 s
[2025-10-13 07:01:51] 2025-10-12 22:01:18,843 | INFO     | nevents: 400
[2025-10-13 07:01:51] 2025-10-12 22:01:18,843 | INFO     | neventsw: 0
[2025-10-13 07:01:51] 2025-10-12 22:01:18,843 | INFO     | pid: 543458
[2025-10-13 07:01:51] 2025-10-12 22:01:18,843 | INFO     | pgrp: 543458
[2025-10-13 07:01:51] 2025-10-12 22:01:18,843 | INFO     | corecount: 3
[2025-10-13 07:01:51] 2025-10-12 22:01:18,843 | INFO     | event service: False
[2025-10-13 07:01:51] 2025-10-12 22:01:18,843 | INFO     | sizes: {0: 2348840, 3: 2349102, 11: 2349130, 8955: 2377370, 8956: 2386424, 9036: 2386562}
[2025-10-13 07:01:51] 2025-10-12 22:01:18,843 | INFO     | --------------------------------------------------
[2025-10-13 07:01:51] 2025-10-12 22:01:18,843 | INFO     | 
[2025-10-13 07:01:51] 2025-10-12 22:01:18,843 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-10-13 07:01:51] 2025-10-12 22:01:18,854 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:01:51] 2025-10-12 22:01:18,854 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:01:51] 2025-10-12 22:01:18,854 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:01:51] 2025-10-12 22:01:18,854 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:01:51] 2025-10-12 22:01:18,854 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:01:51] 2025-10-12 22:01:18,854 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:01:51] 2025-10-12 22:01:18,854 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:01:51] 2025-10-12 22:01:18,854 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:01:51] 2025-10-12 22:01:18,854 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:01:51] 2025-10-12 22:01:18,854 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:01:51] 2025-10-12 22:01:18,854 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:01:51] 2025-10-12 22:01:18,854 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:01:51] 2025-10-12 22:01:18,855 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:01:51] 2025-10-12 22:01:18,855 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:01:51] 2025-10-12 22:01:18,855 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:01:51] 2025-10-12 22:01:18,855 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:01:51] 2025-10-12 22:01:18,855 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:01:51] 2025-10-12 22:01:18,855 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:01:51] 2025-10-12 22:01:18,855 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:01:51] 2025-10-12 22:01:18,855 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:01:51] 2025-10-12 22:01:18,855 | INFO     | job 6839973977 has completed (purged errors)
[2025-10-13 07:01:51] 2025-10-12 22:01:18,855 | INFO     | overall cleanup function is called
[2025-10-13 07:01:51] 2025-10-12 22:01:19,860 | INFO     | --- collectZombieJob: --- 10, [543458]
[2025-10-13 07:01:51] 2025-10-12 22:01:19,860 | INFO     | zombie collector waiting for pid 543458
[2025-10-13 07:01:51] 2025-10-12 22:01:19,860 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:01:51] 2025-10-12 22:01:19,860 | INFO     | collected zombie processes
[2025-10-13 07:01:51] 2025-10-12 22:01:19,860 | INFO     | will attempt to kill all subprocesses of pid=543458
[2025-10-13 07:01:51] 2025-10-12 22:01:19,898 | INFO     | process IDs to be killed: [543458] (in reverse order)
[2025-10-13 07:01:51] 2025-10-12 22:01:19,919 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:01:51] 2025-10-12 22:01:19,919 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:01:51] 2025-10-12 22:01:19,920 | INFO     | did not find any defunct processes belonging to 543458
[2025-10-13 07:01:51] 2025-10-12 22:01:19,922 | INFO     | did not find any defunct processes belonging to 543458
[2025-10-13 07:01:51] 2025-10-12 22:01:19,922 | INFO     | ready for new job
[2025-10-13 07:01:51] 2025-10-12 22:01:19,922 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:01:51] 2025-10-12 22:01:19,923 | INFO     | ***************************************
[2025-10-13 07:01:51] 2025-10-12 22:01:19,923 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:01:51] 2025-10-12 22:01:19,923 | INFO     | ***************************************
[2025-10-13 07:01:51] 2025-10-12 22:01:19,923 | INFO     | 
[2025-10-13 07:01:51] 2025-10-12 22:01:19,934 | INFO     | architecture information:
[2025-10-13 07:01:51] 2025-10-12 22:01:19,935 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:01:51] 2025-10-12 22:01:19,942 | INFO     | cat /etc/os-release:
[2025-10-13 07:01:51] NAME="CentOS Linux"
[2025-10-13 07:01:51] VERSION="7 (Core)"
[2025-10-13 07:01:51] ID="centos"
[2025-10-13 07:01:51] ID_LIKE="rhel fedora"
[2025-10-13 07:01:51] VERSION_ID="7"
[2025-10-13 07:01:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:01:51] ANSI_COLOR="0;31"
[2025-10-13 07:01:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:01:51] HOME_URL="https://www.centos.org/"
[2025-10-13 07:01:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:01:51] 
[2025-10-13 07:01:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:01:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:01:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:01:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:01:51] 
[2025-10-13 07:01:51] 2025-10-12 22:01:19,943 | INFO     | ***************************************
[2025-10-13 07:01:51] 2025-10-12 22:01:20,445 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-10-13 07:01:51] 2025-10-12 22:01:20,454 | INFO     | sufficient remaining disk space (40218132480 B)
[2025-10-13 07:01:51] 2025-10-12 22:01:20,454 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:01:51] 2025-10-12 22:01:20,454 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:01:51] 2025-10-12 22:01:20,454 | INFO     | update_server=False
[2025-10-13 07:01:51] 2025-10-12 22:01:20,454 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:01:51] 2025-10-12 22:01:20,454 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:01:51] 2025-10-12 22:01:20,454 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:01:51] 2025-10-12 22:01:20,583 | INFO     | all data control threads have been joined
[2025-10-13 07:01:51] 2025-10-12 22:01:21,157 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:01:51] 2025-10-12 22:01:21,157 | INFO     | aborting loop
[2025-10-13 07:01:51] 2025-10-12 22:01:21,459 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:01:51] 2025-10-12 22:01:21,460 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:01:51] 2025-10-12 22:01:21,498 | INFO     | all payload control threads have been joined
[2025-10-13 07:01:51] 2025-10-12 22:01:21,520 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:01:51] 2025-10-12 22:01:21,522 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:01:51] 2025-10-12 22:01:21,535 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:01:51] 2025-10-12 22:01:21,585 | INFO     | [data] control thread has finished
[2025-10-13 07:01:51] 2025-10-12 22:01:21,715 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:01:51] 2025-10-12 22:01:21,865 | INFO     | all job control threads have been joined
[2025-10-13 07:01:51] 2025-10-12 22:01:21,979 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:01:51] 2025-10-12 22:01:22,052 | INFO     | [job] validate thread has finished
[2025-10-13 07:01:51] 2025-10-12 22:01:22,162 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:01:51] 2025-10-12 22:01:22,218 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:01:51] 2025-10-12 22:01:22,447 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:01:51] 2025-10-12 22:01:22,460 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:01:51] 2025-10-12 22:01:22,503 | INFO     | [payload] control thread has finished
[2025-10-13 07:01:51] 2025-10-12 22:01:22,863 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:01:51] 2025-10-12 22:01:22,870 | INFO     | [job] control thread has finished
[2025-10-13 07:01:51] 2025-10-12 22:01:25,527 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:01:51] 2025-10-12 22:01:41,813 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:01:51] 2025-10-12 22:01:42,475 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140424381790016)>', '<ExcThread(monitor, started 140423754413824)>']
[2025-10-13 07:01:51] 2025-10-12 22:01:47,489 | INFO     | all workflow threads have been joined
[2025-10-13 07:01:51] 2025-10-12 22:01:47,489 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:01:51] 2025-10-12 22:01:47,490 | INFO     | traces error code: 0
[2025-10-13 07:01:51] 2025-10-12 22:01:47,490 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:01:51] 2025-10-12 22:01:51,046 | INFO     | PID=536920 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 07:01:51] 2025-10-12 22:01:51,047 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:01:51] 2025-10-12 22:01:51,047 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:01:51] 2025-10-12 22:01:51,047 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:01:51] 2025-10-12 22:01:51,047 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:01:51] 2025-10-12 22:01:51,047 | INFO     | [monitor] control thread has ended
[2025-10-13 07:01:51] 2025-10-12 22:01:51,106 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:01:51] 2025-10-12 22:01:51,108 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:01:51] 2025-10-12 22:01:51,109 [wrapper] pilotpid: 536920
[2025-10-13 07:01:51] 2025-10-12 22:01:51,111 [wrapper] Pilot exit status: 0
[2025-10-13 07:01:51] 2025-10-12 22:01:51,117 [wrapper] pandaids: 6839973977
[2025-10-13 07:01:51] 2025-10-12 22:01:51,130 [wrapper] cleanup supervisor_pilot  560410 536921
[2025-10-13 07:01:51] 2025-10-12 22:01:51,131 [wrapper] Test setup, not cleaning
[2025-10-13 07:01:51] 2025-10-12 22:01:51,133 [wrapper] apfmon messages muted
[2025-10-13 07:01:51] 2025-10-12 22:01:51,135 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:01:51] 2025-10-12 22:01:51,137 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:01:51]  *** Error codes and diagnostics ***
[2025-10-13 07:01:51]     "exeErrorCode": 0,
[2025-10-13 07:01:51]     "exeErrorDiag": "",
[2025-10-13 07:01:51]     "pilotErrorCode": 0,
[2025-10-13 07:01:51]     "pilotErrorDiag": "",
[2025-10-13 07:01:51]  *** Listing of results directory ***
[2025-10-13 07:01:51] total 420680
[2025-10-13 07:01:51] -rw-r--r--. 1 boinc boinc    557409 Oct 11 14:13 pilot3.tar.gz
[2025-10-13 07:01:51] -rwx------. 1 boinc boinc     36292 Oct 11 14:23 runpilot2-wrapper.sh
[2025-10-13 07:01:51] -rw-r--r--. 1 boinc boinc      5112 Oct 11 14:23 queuedata.json
[2025-10-13 07:01:51] -rw-r--r--. 1 boinc boinc       100 Oct 13 04:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:01:51] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 04:28 run_atlas
[2025-10-13 07:01:51] -rw-r--r--. 1 boinc boinc       105 Oct 13 04:28 job.xml
[2025-10-13 07:01:51] -rw-r--r--. 2 boinc boinc     15120 Oct 13 04:28 start_atlas.sh
[2025-10-13 07:01:51] drwxrwx--x. 2 boinc boinc        68 Oct 13 04:28 shared
[2025-10-13 07:01:51] -rw-r--r--. 2 boinc boinc    569674 Oct 13 04:28 input.tar.gz
[2025-10-13 07:01:51] -rw-r--r--. 2 boinc boinc 221234939 Oct 13 04:28 EVNT.46373045._001043.pool.root.1
[2025-10-13 07:01:51] -rw-r--r--. 1 boinc boinc         0 Oct 13 04:28 boinc_lockfile
[2025-10-13 07:01:51] -rw-r--r--. 1 boinc boinc      2537 Oct 13 04:28 pandaJob.out
[2025-10-13 07:01:51] -rw-------. 1 boinc boinc    975536 Oct 13 04:30 agis_schedconf.cvmfs.json
[2025-10-13 07:01:51] -rw-------. 1 boinc boinc   1560580 Oct 13 04:30 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:01:51] drwx------. 5 boinc boinc      4096 Oct 13 04:30 pilot3
[2025-10-13 07:01:51] -rw-r--r--. 1 boinc boinc      9297 Oct 13 05:27 init_data.xml
[2025-10-13 07:01:51] -rw-------. 1 boinc boinc 202512283 Oct 13 06:59 HITS.46373048._097789.pool.root.1
[2025-10-13 07:01:51] -rw-r--r--. 1 boinc boinc       529 Oct 13 06:59 boinc_task_state.xml
[2025-10-13 07:01:51] -rw-------. 1 boinc boinc      1011 Oct 13 06:59 memory_monitor_summary.json
[2025-10-13 07:01:51] -rw-------. 1 boinc boinc    301390 Oct 13 06:59 log.46373048._097789.job.log.tgz.1
[2025-10-13 07:01:51] -rw-------. 1 boinc boinc        95 Oct 13 07:01 pilot_heartbeat.json
[2025-10-13 07:01:51] -rw-------. 1 boinc boinc      7763 Oct 13 07:01 heartbeat.json
[2025-10-13 07:01:51] -rw-r--r--. 1 boinc boinc      8192 Oct 13 07:01 boinc_mmap_file
[2025-10-13 07:01:51] -rw-r--r--. 1 boinc boinc        27 Oct 13 07:01 wrapper_checkpoint.txt
[2025-10-13 07:01:51] -rw-------. 1 boinc boinc       746 Oct 13 07:01 pilotlog.txt
[2025-10-13 07:01:51] -rw-------. 1 boinc boinc   1266428 Oct 13 07:01 log.46373048._097789.job.log.1
[2025-10-13 07:01:51] -rw-------. 1 boinc boinc       357 Oct 13 07:01 output.list
[2025-10-13 07:01:51] -rw-r--r--. 1 boinc boinc       620 Oct 13 07:01 runtime_log
[2025-10-13 07:01:51] -rw-------. 1 boinc boinc   1587200 Oct 13 07:01 result.tar.gz
[2025-10-13 07:01:51] -rw-------. 1 boinc boinc       643 Oct 13 07:01 vC8LDm2FhR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnVfNDmQ9kgSn.diag
[2025-10-13 07:01:51] -rw-r--r--. 1 boinc boinc      8661 Oct 13 07:01 runtime_log.err
[2025-10-13 07:01:51] -rw-r--r--. 1 boinc boinc     20869 Oct 13 07:01 stderr.txt
[2025-10-13 07:01:51] HITS file was successfully produced:
[2025-10-13 07:01:51] -rw-------. 1 boinc boinc 202512283 Oct 13 06:59 shared/HITS.pool.root.1
[2025-10-13 07:01:51]  *** Contents of shared directory: ***
[2025-10-13 07:01:51] total 415948
[2025-10-13 07:01:51] -rw-r--r--. 2 boinc boinc     15120 Oct 13 04:28 start_atlas.sh
[2025-10-13 07:01:51] -rw-r--r--. 2 boinc boinc    569674 Oct 13 04:28 input.tar.gz
[2025-10-13 07:01:51] -rw-r--r--. 2 boinc boinc 221234939 Oct 13 04:28 ATLAS.root_0
[2025-10-13 07:01:51] -rw-------. 1 boinc boinc 202512283 Oct 13 06:59 HITS.pool.root.1
[2025-10-13 07:01:51] -rw-------. 1 boinc boinc   1587200 Oct 13 07:01 result.tar.gz
07:01:52 (532627): run_atlas exited; CPU time 25526.830460
07:01:52 (532627): called boinc_finish(0)

</stderr_txt>
]]>

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