Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:41:38 (3614521): wrapper (7.7.26015): starting
19:41:38 (3614521): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 19:41:38] Arguments: --nthreads 4
[2025-10-12 19:41:38] Threads: 4
[2025-10-12 19:41:38] Checking for CVMFS
[2025-10-12 19:41:38] No cvmfs_config command found, will try listing directly
[2025-10-12 19:41:38] CVMFS is ok
[2025-10-12 19:41:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 19:41:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 19:41:38] Further information can be found at the LHC@home message board.
[2025-10-12 19:41:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 19:41:38] Checking for apptainer binary...
[2025-10-12 19:41:38] which: no apptainer in ((null))
[2025-10-12 19:41:38] apptainer is not installed, using version from CVMFS
[2025-10-12 19:41:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 19:41:38] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-10-12 19:41:38] apptainer works
[2025-10-12 19:41:38] Set ATHENA_PROC_NUMBER=4
[2025-10-12 19:41:38] Set ATHENA_CORE_NUMBER=4
[2025-10-12 19:41:38] Starting ATLAS job with PandaID=6838200427
[2025-10-12 19:41:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:34:15]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:34:15] 2025-10-12 20:25:34,112 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 22:34:15] 2025-10-12 20:25:36,009 | INFO     | time since job start (9828s) is within the limit (172800.0s)
[2025-10-12 22:34:15] 2025-10-12 20:25:36,025 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 22:34:15] 2025-10-12 20:25:36,032 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2726.9244531249997
[2025-10-12 22:34:15] 2025-10-12 20:25:36,039 | INFO     | using path: /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6838200427/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 22:34:15] 2025-10-12 20:25:36,040 | INFO     | extracted standard info from prmon json
[2025-10-12 22:34:15] 2025-10-12 20:25:36,040 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 22:34:15] 2025-10-12 20:25:36,040 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 22:34:15] 2025-10-12 20:25:36,040 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 22:34:15] 2025-10-12 20:25:36,040 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 22:34:15] 2025-10-12 20:25:36,042 | INFO     | fitting pss+swap vs Time
[2025-10-12 22:34:15] 2025-10-12 20:25:36,042 | INFO     | sum of square deviations: 1294014960.0
[2025-10-12 22:34:15] 2025-10-12 20:25:36,043 | INFO     | sum of deviations: 23803573171.0
[2025-10-12 22:34:15] 2025-10-12 20:25:36,043 | INFO     | mean x: 1760295814.0
[2025-10-12 22:34:15] 2025-10-12 20:25:36,043 | INFO     | mean y: 2309585.4720496894
[2025-10-12 22:34:15] 2025-10-12 20:25:36,043 | INFO     | -- intersect: -32378560424.836025
[2025-10-12 22:34:15] 2025-10-12 20:25:36,043 | INFO     | intersect: -32378560424.836025
[2025-10-12 22:34:15] 2025-10-12 20:25:36,043 | INFO     | chi2: 1.3115344380451368
[2025-10-12 22:34:15] 2025-10-12 20:25:36,043 | INFO     | sum of square deviations: 1177156955.0
[2025-10-12 22:34:15] 2025-10-12 20:25:36,044 | INFO     | sum of deviations: 22374395051.500004
[2025-10-12 22:34:15] 2025-10-12 20:25:36,044 | INFO     | mean x: 1760295661.5
[2025-10-12 22:34:15] 2025-10-12 20:25:36,044 | INFO     | mean y: 2307739.108974359
[2025-10-12 22:34:15] 2025-10-12 20:25:36,044 | INFO     | -- intersect: -33455890312.18022
[2025-10-12 22:34:15] 2025-10-12 20:25:36,044 | INFO     | intersect: -33455890312.18022
[2025-10-12 22:34:15] 2025-10-12 20:25:36,044 | INFO     | chi2: 1.31062133464569
[2025-10-12 22:34:15] 2025-10-12 20:25:36,044 | INFO     | current chi2=1.31062133464569 (change=0.0696210006355395 %)
[2025-10-12 22:34:15] 2025-10-12 20:25:36,044 | INFO     | right removable region: 155
[2025-10-12 22:34:15] 2025-10-12 20:25:36,044 | INFO     | sum of square deviations: 1177156955.0
[2025-10-12 22:34:15] 2025-10-12 20:25:36,045 | INFO     | sum of deviations: 3311726447.5000005
[2025-10-12 22:34:15] 2025-10-12 20:25:36,045 | INFO     | mean x: 1760295966.5
[2025-10-12 22:34:15] 2025-10-12 20:25:36,045 | INFO     | mean y: 2335904.0064102565
[2025-10-12 22:34:15] 2025-10-12 20:25:36,045 | INFO     | -- intersect: -4949950775.288301
[2025-10-12 22:34:15] 2025-10-12 20:25:36,045 | INFO     | intersect: -4949950775.288301
[2025-10-12 22:34:15] 2025-10-12 20:25:36,045 | INFO     | chi2: 0.005464064782000597
[2025-10-12 22:34:15] 2025-10-12 20:25:36,045 | INFO     | current chi2=0.005464064782000597 (change=99.58338381185439 %)
[2025-10-12 22:34:15] 2025-10-12 20:25:36,045 | INFO     | sum of square deviations: 1067554900.0
[2025-10-12 22:34:15] 2025-10-12 20:25:36,046 | INFO     | sum of deviations: 2563078114.0
[2025-10-12 22:34:15] 2025-10-12 20:25:36,046 | INFO     | mean x: 1760296119.0
[2025-10-12 22:34:15] 2025-10-12 20:25:36,046 | INFO     | mean y: 2336955.086092715
[2025-10-12 22:34:15] 2025-10-12 20:25:36,046 | INFO     | -- intersect: -4223934177.918907
[2025-10-12 22:34:15] 2025-10-12 20:25:36,046 | INFO     | intersect: -4223934177.918907
[2025-10-12 22:34:15] 2025-10-12 20:25:36,046 | INFO     | chi2: 0.004200265482160568
[2025-10-12 22:34:15] 2025-10-12 20:25:36,046 | INFO     | current chi2=0.004200265482160568 (change=23.129288364280796 %)
[2025-10-12 22:34:15] 2025-10-12 20:25:36,046 | INFO     | left removable region: 20
[2025-10-12 22:34:15] 2025-10-12 20:25:36,046 | INFO     | sum of square deviations: 762879420.0
[2025-10-12 22:34:15] 2025-10-12 20:25:36,047 | INFO     | sum of deviations: 1071221915.0000007
[2025-10-12 22:34:15] 2025-10-12 20:25:36,047 | INFO     | mean x: 1760296241.0
[2025-10-12 22:34:15] 2025-10-12 20:25:36,047 | INFO     | mean y: 2337132.511111111
[2025-10-12 22:34:15] 2025-10-12 20:25:36,047 | INFO     | -- intersect: -2469440006.59604
[2025-10-12 22:34:15] 2025-10-12 20:25:36,047 | INFO     | intersect: -2469440006.59604
[2025-10-12 22:34:15] 2025-10-12 20:25:36,047 | INFO     | chi2: 0.0012780732644296217
[2025-10-12 22:34:15] 2025-10-12 20:25:36,047 | INFO     | -- intersect: -2469440006.59604
[2025-10-12 22:34:15] 2025-10-12 20:25:36,047 | INFO     | current memory leak: 1.40 B/s (using 135 data points, chi2=0.00)
[2025-10-12 22:34:15] 2025-10-12 20:25:36,048 | INFO     | could have reported an average CPU frequency of 2698 MHz (9 samples)
[2025-10-12 22:34:15] 2025-10-12 20:25:36,048 | INFO     | ..............................
[2025-10-12 22:34:15] 2025-10-12 20:25:36,048 | INFO     | . Timing measurements:
[2025-10-12 22:34:15] 2025-10-12 20:25:36,048 | INFO     | . get job = 0 s
[2025-10-12 22:34:15] 2025-10-12 20:25:36,048 | INFO     | . initial setup = 1 s
[2025-10-12 22:34:15] 2025-10-12 20:25:36,048 | INFO     | . payload setup = 5 s
[2025-10-12 22:34:15] 2025-10-12 20:25:36,048 | INFO     | . stage-in = 0 s
[2025-10-12 22:34:15] 2025-10-12 20:25:36,048 | INFO     | . payload execution = 9797 s
[2025-10-12 22:34:15] 2025-10-12 20:25:36,048 | INFO     | . stage-out = 0 s
[2025-10-12 22:34:15] 2025-10-12 20:25:36,048 | INFO     | . log creation = 0 s
[2025-10-12 22:34:15] 2025-10-12 20:25:36,048 | INFO     | ..............................
[2025-10-12 22:34:15] 2025-10-12 20:25:36,254 | INFO     | 
[2025-10-12 22:34:15] 2025-10-12 20:25:36,254 | INFO     | job summary report
[2025-10-12 22:34:15] 2025-10-12 20:25:36,254 | INFO     | --------------------------------------------------
[2025-10-12 22:34:15] 2025-10-12 20:25:36,254 | INFO     | PanDA job id: 6838200427
[2025-10-12 22:34:15] 2025-10-12 20:25:36,254 | INFO     | task id: 46676269
[2025-10-12 22:34:15] 2025-10-12 20:25:36,254 | INFO     | errors: (none)
[2025-10-12 22:34:15] 2025-10-12 20:25:36,255 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 22:34:15] 2025-10-12 20:25:36,255 | INFO     | pilot state: finished 
[2025-10-12 22:34:15] 2025-10-12 20:25:36,255 | INFO     | transexitcode: 0
[2025-10-12 22:34:15] 2025-10-12 20:25:36,255 | INFO     | exeerrorcode: 0
[2025-10-12 22:34:15] 2025-10-12 20:25:36,255 | INFO     | exeerrordiag: 
[2025-10-12 22:34:15] 2025-10-12 20:25:36,255 | INFO     | exitcode: 0
[2025-10-12 22:34:15] 2025-10-12 20:25:36,255 | INFO     | exitmsg: OK
[2025-10-12 22:34:15] 2025-10-12 20:25:36,255 | INFO     | cpuconsumptiontime: 37701 s
[2025-10-12 22:34:15] 2025-10-12 20:25:36,255 | INFO     | nevents: 400
[2025-10-12 22:34:15] 2025-10-12 20:25:36,255 | INFO     | neventsw: 0
[2025-10-12 22:34:15] 2025-10-12 20:25:36,255 | INFO     | pid: 3650519
[2025-10-12 22:34:15] 2025-10-12 20:25:36,255 | INFO     | pgrp: 3650519
[2025-10-12 22:34:15] 2025-10-12 20:25:36,255 | INFO     | corecount: 4
[2025-10-12 22:34:15] 2025-10-12 20:25:36,256 | INFO     | event service: False
[2025-10-12 22:34:15] 2025-10-12 20:25:36,256 | INFO     | sizes: {0: 2348029, 1: 2348896, 5: 2349158, 12: 2349214, 9806: 2377797, 9807: 2387000, 9808: 2387000, 9812: 2387258}
[2025-10-12 22:34:15] 2025-10-12 20:25:36,256 | INFO     | --------------------------------------------------
[2025-10-12 22:34:15] 2025-10-12 20:25:36,256 | INFO     | 
[2025-10-12 22:34:15] 2025-10-12 20:25:36,256 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2025-10-12 22:34:15] 2025-10-12 20:25:36,276 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 22:34:15] 2025-10-12 20:25:36,276 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 22:34:15] 2025-10-12 20:25:36,277 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 22:34:15] 2025-10-12 20:25:36,277 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 22:34:15] 2025-10-12 20:25:36,277 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 22:34:15] 2025-10-12 20:25:36,277 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 22:34:15] 2025-10-12 20:25:36,277 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 22:34:15] 2025-10-12 20:25:36,277 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 22:34:15] 2025-10-12 20:25:36,277 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 22:34:15] 2025-10-12 20:25:36,277 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 22:34:15] 2025-10-12 20:25:36,277 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 22:34:15] 2025-10-12 20:25:36,277 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 22:34:15] 2025-10-12 20:25:36,277 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 22:34:15] 2025-10-12 20:25:36,278 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 22:34:15] 2025-10-12 20:25:36,278 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 22:34:15] 2025-10-12 20:25:36,278 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 22:34:15] 2025-10-12 20:25:36,278 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 22:34:15] 2025-10-12 20:25:36,278 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 22:34:15] 2025-10-12 20:25:36,278 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 22:34:15] 2025-10-12 20:25:36,278 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 22:34:15] 2025-10-12 20:25:36,278 | INFO     | job 6838200427 has completed (purged errors)
[2025-10-12 22:34:15] 2025-10-12 20:25:36,278 | INFO     | overall cleanup function is called
[2025-10-12 22:34:15] 2025-10-12 20:25:37,285 | INFO     | --- collectZombieJob: --- 10, [3650519]
[2025-10-12 22:34:15] 2025-10-12 20:25:37,285 | INFO     | zombie collector waiting for pid 3650519
[2025-10-12 22:34:15] 2025-10-12 20:25:37,286 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 22:34:15] 2025-10-12 20:25:37,286 | INFO     | collected zombie processes
[2025-10-12 22:34:15] 2025-10-12 20:25:37,286 | INFO     | will attempt to kill all subprocesses of pid=3650519
[2025-10-12 22:34:15] 2025-10-12 20:25:37,668 | INFO     | process IDs to be killed: [3650519] (in reverse order)
[2025-10-12 22:34:15] 2025-10-12 20:25:37,777 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 22:34:15] 2025-10-12 20:25:37,777 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 22:34:15] 2025-10-12 20:25:37,789 | INFO     | did not find any defunct processes belonging to 3650519
[2025-10-12 22:34:15] 2025-10-12 20:25:37,800 | INFO     | did not find any defunct processes belonging to 3650519
[2025-10-12 22:34:15] 2025-10-12 20:25:37,801 | INFO     | ready for new job
[2025-10-12 22:34:15] 2025-10-12 20:25:37,801 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 22:34:15] 2025-10-12 20:25:37,803 | INFO     | ***************************************
[2025-10-12 22:34:15] 2025-10-12 20:25:37,803 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 22:34:15] 2025-10-12 20:25:37,803 | INFO     | ***************************************
[2025-10-12 22:34:15] 2025-10-12 20:25:37,803 | INFO     | 
[2025-10-12 22:34:15] 2025-10-12 20:25:37,807 | INFO     | architecture information:
[2025-10-12 22:34:15] 2025-10-12 20:25:37,808 | INFO     | executing command: cat /etc/os-release
[2025-10-12 22:34:15] 2025-10-12 20:25:37,824 | INFO     | cat /etc/os-release:
[2025-10-12 22:34:15] NAME="CentOS Linux"
[2025-10-12 22:34:15] VERSION="7 (Core)"
[2025-10-12 22:34:15] ID="centos"
[2025-10-12 22:34:15] ID_LIKE="rhel fedora"
[2025-10-12 22:34:15] VERSION_ID="7"
[2025-10-12 22:34:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:34:15] ANSI_COLOR="0;31"
[2025-10-12 22:34:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:34:15] HOME_URL="https://www.centos.org/"
[2025-10-12 22:34:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:34:15] 
[2025-10-12 22:34:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:34:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:34:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:34:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:34:15] 
[2025-10-12 22:34:15] 2025-10-12 20:25:37,824 | INFO     | ***************************************
[2025-10-12 22:34:15] 2025-10-12 20:25:38,326 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2025-10-12 22:34:15] 2025-10-12 20:25:38,343 | INFO     | sufficient remaining disk space (692525727744 B)
[2025-10-12 22:34:15] 2025-10-12 20:25:38,344 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:34:15] 2025-10-12 20:25:38,344 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:34:15] 2025-10-12 20:25:38,344 | INFO     | update_server=False
[2025-10-12 22:34:15] 2025-10-12 20:25:38,344 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:34:15] 2025-10-12 20:25:38,344 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:34:15] 2025-10-12 20:25:38,345 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:34:15] 2025-10-12 20:25:38,345 | INFO     | aborting loop
[2025-10-12 22:34:15] 2025-10-12 20:25:38,873 | INFO     | all payload control threads have been joined
[2025-10-12 22:34:15] 2025-10-12 20:25:39,059 | INFO     | all data control threads have been joined
[2025-10-12 22:34:15] 2025-10-12 20:25:39,197 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:34:15] 2025-10-12 20:25:39,349 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:34:15] 2025-10-12 20:25:39,350 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:34:15] 2025-10-12 20:25:39,434 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:34:15] 2025-10-12 20:25:39,857 | INFO     | all job control threads have been joined
[2025-10-12 22:34:15] 2025-10-12 20:25:39,879 | INFO     | [payload] control thread has finished
[2025-10-12 22:34:15] 2025-10-12 20:25:40,051 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:34:15] 2025-10-12 20:25:40,061 | INFO     | [data] control thread has finished
[2025-10-12 22:34:15] 2025-10-12 20:25:40,286 | INFO     | [job] validate thread has finished
[2025-10-12 22:34:15] 2025-10-12 20:25:40,498 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:34:15] 2025-10-12 20:25:40,547 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:34:15] 2025-10-12 20:25:40,558 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:34:15] 2025-10-12 20:25:40,802 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:34:15] 2025-10-12 20:25:40,858 | INFO     | [job] control thread has finished
[2025-10-12 22:34:15] 2025-10-12 20:25:41,112 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:34:15] 2025-10-12 20:25:41,202 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:34:15] 2025-10-12 20:25:42,117 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:34:15] 2025-10-12 20:25:42,349 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:34:15] 2025-10-12 20:25:48,767 | INFO     | job.realtimelogging is not enabled
[2025-10-12 22:34:15] 2025-10-12 20:25:49,773 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:34:15] 2025-10-12 20:26:03,338 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:34:15] 2025-10-12 20:26:05,388 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22730294167360)>', '<ExcThread(monitor, started 22730046912256)>']
[2025-10-12 22:34:15] 2025-10-12 20:26:09,572 | INFO     | PID=3623849 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 22:34:15] 2025-10-12 20:26:09,572 | INFO     | .. there are 4 such processes running
[2025-10-12 22:34:15] 2025-10-12 20:26:09,573 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:34:15] 2025-10-12 20:26:09,573 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:34:15] 2025-10-12 20:26:09,573 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:34:15] 2025-10-12 20:26:09,573 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:34:15] 2025-10-12 20:26:09,573 | INFO     | [monitor] control thread has ended
[2025-10-12 22:34:15] 2025-10-12 20:26:10,403 | INFO     | all workflow threads have been joined
[2025-10-12 22:34:15] 2025-10-12 20:26:10,404 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:34:15] 2025-10-12 20:26:10,404 | INFO     | traces error code: 0
[2025-10-12 22:34:15] 2025-10-12 20:26:10,404 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:34:15] 2025-10-12 20:26:10,579 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:34:15] 2025-10-12 20:26:10,582 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:34:15] 2025-10-12 20:26:10,585 [wrapper] pilotpid: 3623849
[2025-10-12 22:34:15] 2025-10-12 20:26:10,587 [wrapper] Pilot exit status: 0
[2025-10-12 22:34:15] 2025-10-12 20:26:10,597 [wrapper] pandaids: 6838200427
[2025-10-12 22:34:15] 2025-10-12 20:26:10,667 [wrapper] cleanup supervisor_pilot 3800183 3623851
[2025-10-12 22:34:15] 2025-10-12 20:26:10,670 [wrapper] Test setup, not cleaning
[2025-10-12 22:34:15] 2025-10-12 20:26:10,672 [wrapper] apfmon messages muted
[2025-10-12 22:34:15] 2025-10-12 20:26:10,675 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:34:15] 2025-10-12 20:26:10,677 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:34:15]  *** Error codes and diagnostics ***
[2025-10-12 22:34:15]     "exeErrorCode": 0,
[2025-10-12 22:34:15]     "exeErrorDiag": "",
[2025-10-12 22:34:15]     "pilotErrorCode": 0,
[2025-10-12 22:34:15]     "pilotErrorDiag": "",
[2025-10-12 22:34:15]  *** Listing of results directory ***
[2025-10-12 22:34:15] total 409756
[2025-10-12 22:34:15] -rw-r--r-- 1 boinc boinc    557409 Oct 11 09:58 pilot3.tar.gz
[2025-10-12 22:34:15] -rw-r--r-- 1 boinc boinc      5112 Oct 11 10:06 queuedata.json
[2025-10-12 22:34:15] -rwx------ 1 boinc boinc     36292 Oct 11 10:07 runpilot2-wrapper.sh
[2025-10-12 22:34:15] -rw-r--r-- 1 boinc boinc       100 Oct 12 19:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:34:15] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 19:41 run_atlas
[2025-10-12 22:34:15] -rw-r--r-- 1 boinc boinc       105 Oct 12 19:41 job.xml
[2025-10-12 22:34:15] -rw-r--r-- 1 boinc boinc      6635 Oct 12 19:41 init_data.xml
[2025-10-12 22:34:15] -rw-r--r-- 2 boinc boinc 220750551 Oct 12 19:41 EVNT.46676267._002171.pool.root.1
[2025-10-12 22:34:15] -rw-r--r-- 2 boinc boinc     15120 Oct 12 19:41 start_atlas.sh
[2025-10-12 22:34:15] drwxrwx--x 2 boinc boinc      4096 Oct 12 19:41 shared
[2025-10-12 22:34:15] -rw-r--r-- 2 boinc boinc    569683 Oct 12 19:41 input.tar.gz
[2025-10-12 22:34:15] -rw-r--r-- 1 boinc boinc         0 Oct 12 19:41 boinc_lockfile
[2025-10-12 22:34:15] -rw-r--r-- 1 boinc boinc      2550 Oct 12 19:41 pandaJob.out
[2025-10-12 22:34:15] -rw------- 1 boinc boinc    975528 Oct 12 19:41 agis_schedconf.cvmfs.json
[2025-10-12 22:34:15] -rw------- 1 boinc boinc   1560580 Oct 12 19:41 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:34:15] drwx------ 5 boinc boinc      4096 Oct 12 19:41 pilot3
[2025-10-12 22:34:15] -rw------- 1 boinc boinc 191451255 Oct 12 22:24 HITS.46676269._054093.pool.root.1
[2025-10-12 22:34:15] -rw-r--r-- 1 boinc boinc       527 Oct 12 22:25 boinc_task_state.xml
[2025-10-12 22:34:15] -rw------- 1 boinc boinc      1032 Oct 12 22:25 memory_monitor_summary.json
[2025-10-12 22:34:15] -rw------- 1 boinc boinc        95 Oct 12 22:25 pilot_heartbeat.json
[2025-10-12 22:34:15] -rw------- 1 boinc boinc    333880 Oct 12 22:25 log.46676269._054093.job.log.tgz.1
[2025-10-12 22:34:15] -rw------- 1 boinc boinc      7821 Oct 12 22:25 heartbeat.json
[2025-10-12 22:34:15] -rw------- 1 boinc boinc      4905 Oct 12 22:26 pilotlog.txt
[2025-10-12 22:34:15] -rw------- 1 boinc boinc   1403113 Oct 12 22:26 log.46676269._054093.job.log.1
[2025-10-12 22:34:15] -rw------- 1 boinc boinc       357 Oct 12 22:26 output.list
[2025-10-12 22:34:15] -rw-r--r-- 1 boinc boinc       620 Oct 12 22:26 runtime_log
[2025-10-12 22:34:15] -rw------- 1 boinc boinc   1761280 Oct 12 22:26 result.tar.gz
[2025-10-12 22:34:15] -rw-r--r-- 1 boinc boinc      9069 Oct 12 22:26 runtime_log.err
[2025-10-12 22:34:15] -rw------- 1 boinc boinc       662 Oct 12 22:26 SSMMDmMojR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsqfNDmlTevam.diag
[2025-10-12 22:34:15] -rw-r--r-- 1 boinc boinc        26 Oct 12 22:34 wrapper_checkpoint.txt
[2025-10-12 22:34:15] -rw-r--r-- 1 boinc boinc      8192 Oct 12 22:34 boinc_mmap_file
[2025-10-12 22:34:15] -rw-r--r-- 1 boinc boinc     20899 Oct 12 22:34 stderr.txt
[2025-10-12 22:34:15] HITS file was successfully produced:
[2025-10-12 22:34:15] -rw------- 1 boinc boinc 191451255 Oct 12 22:24 shared/HITS.pool.root.1
[2025-10-12 22:34:15]  *** Contents of shared directory: ***
[2025-10-12 22:34:15] total 404852
[2025-10-12 22:34:15] -rw-r--r-- 2 boinc boinc 220750551 Oct 12 19:41 ATLAS.root_0
[2025-10-12 22:34:15] -rw-r--r-- 2 boinc boinc     15120 Oct 12 19:41 start_atlas.sh
[2025-10-12 22:34:15] -rw-r--r-- 2 boinc boinc    569683 Oct 12 19:41 input.tar.gz
[2025-10-12 22:34:15] -rw------- 1 boinc boinc 191451255 Oct 12 22:24 HITS.pool.root.1
[2025-10-12 22:34:15] -rw------- 1 boinc boinc   1761280 Oct 12 22:26 result.tar.gz
22:34:17 (3614521): run_atlas exited; CPU time 38107.697736
22:34:17 (3614521): called boinc_finish(0)

</stderr_txt>
]]>

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