Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:08:04 (2956973): wrapper (7.7.26015): starting
07:08:04 (2956973): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 07:08:04] Arguments: --nthreads 8
[2025-10-11 07:08:04] Threads: 8
[2025-10-11 07:08:04] Checking for CVMFS
[2025-10-11 07:08:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 07:08:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 07:08:05] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 07:08:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 07:08:07] 2.13.2.0 10966 61508 381552 151582 0 316 24754548 32935936 30700 16776704 4 108164157 99.519 134092078 8596 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 07:08:07] CVMFS is ok
[2025-10-11 07:08:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 07:08:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 07:08:07] Further information can be found at the LHC@home message board.
[2025-10-11 07:08:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 07:08:07] Checking for apptainer binary...
[2025-10-11 07:08:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 07:08:07] Running /usr/bin/apptainer --version
[2025-10-11 07:08:08] apptainer version 1.4.3-1.el9
[2025-10-11 07:08:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 07:08:09] c6-12-25-3.aglt2.org
[2025-10-11 07:08:09] apptainer works
[2025-10-11 07:08:09] Set ATHENA_PROC_NUMBER=8
[2025-10-11 07:08:09] Set ATHENA_CORE_NUMBER=8
[2025-10-11 07:08:09] Starting ATLAS job with PandaID=6837785272
[2025-10-11 07:08:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 21:05:47]  *** The last 200 lines of the pilot log: ***
[2025-10-11 21:05:47] 2025-10-12 01:04:40,629 | INFO     | intersect: -9008454108.951578
[2025-10-11 21:05:47] 2025-10-12 01:04:40,706 | INFO     | chi2: 7.112570969220017
[2025-10-11 21:05:47] 2025-10-12 01:04:40,707 | INFO     | current chi2=7.112570969220017 (change=34.366146738395436 %)
[2025-10-11 21:05:47] 2025-10-12 01:04:40,742 | INFO     | sum of square deviations: 162362502830.85974
[2025-10-11 21:05:47] 2025-10-12 01:04:40,933 | INFO     | monitor loop #1864: job 0:6837785272 is in state 'finished'
[2025-10-11 21:05:47] 2025-10-12 01:04:40,934 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 21:05:47] 2025-10-12 01:04:41,241 | INFO     | time since job start (50085s) is within the limit (172800.0s)
[2025-10-11 21:05:47] 2025-10-12 01:04:41,319 | INFO     | sum of deviations: 681623544108.6415
[2025-10-11 21:05:47] 2025-10-12 01:04:41,424 | INFO     | mean x: 1760206412.8995037
[2025-10-11 21:05:47] 2025-10-12 01:04:41,425 | INFO     | mean y: 2080897.106699752
[2025-10-11 21:05:47] 2025-10-12 01:04:41,425 | INFO     | -- intersect: -7387544863.794519
[2025-10-11 21:05:47] 2025-10-12 01:04:41,425 | INFO     | intersect: -7387544863.794519
[2025-10-11 21:05:47] 2025-10-12 01:04:41,480 | INFO     | chi2: 5.062412280235904
[2025-10-11 21:05:47] 2025-10-12 01:04:41,480 | INFO     | current chi2=5.062412280235904 (change=28.824439121328567 %)
[2025-10-11 21:05:47] 2025-10-12 01:04:41,517 | INFO     | sum of square deviations: 159359442966.75143
[2025-10-11 21:05:47] 2025-10-12 01:04:42,082 | INFO     | sum of deviations: 547871902337.8008
[2025-10-11 21:05:47] 2025-10-12 01:04:42,082 | INFO     | mean x: 1760206565.403246
[2025-10-11 21:05:47] 2025-10-12 01:04:42,083 | INFO     | mean y: 2087689.3845193507
[2025-10-11 21:05:47] 2025-10-12 01:04:42,083 | INFO     | -- intersect: -6049437727.255945
[2025-10-11 21:05:47] 2025-10-12 01:04:42,083 | INFO     | intersect: -6049437727.255945
[2025-10-11 21:05:47] 2025-10-12 01:04:42,134 | INFO     | chi2: 3.7672197870995987
[2025-10-11 21:05:47] 2025-10-12 01:04:42,135 | INFO     | current chi2=3.7672197870995987 (change=25.58449255887058 %)
[2025-10-11 21:05:47] 2025-10-12 01:04:42,194 | INFO     | sum of square deviations: 156393786681.55115
[2025-10-11 21:05:47] 2025-10-12 01:04:42,882 | INFO     | sum of deviations: 432542412018.7406
[2025-10-11 21:05:47] 2025-10-12 01:04:42,882 | INFO     | mean x: 1760206717.9032664
[2025-10-11 21:05:47] 2025-10-12 01:04:42,883 | INFO     | mean y: 2093617.0615577889
[2025-10-11 21:05:47] 2025-10-12 01:04:42,904 | INFO     | -- intersect: -4866156430.261348
[2025-10-11 21:05:47] 2025-10-12 01:04:42,905 | INFO     | intersect: -4866156430.261348
[2025-10-11 21:05:47] 2025-10-12 01:04:42,908 | INFO     | chi2: 2.792913192030958
[2025-10-11 21:05:47] 2025-10-12 01:04:42,932 | INFO     | current chi2=2.792913192030958 (change=25.86274892707453 %)
[2025-10-11 21:05:47] 2025-10-12 01:04:42,934 | INFO     | sum of square deviations: 153465153740.35168
[2025-10-11 21:05:47] 2025-10-12 01:04:43,387 | INFO     | time since job start (50087s) is within the limit (172800.0s)
[2025-10-11 21:05:47] 2025-10-12 01:04:43,650 | INFO     | monitor loop #1865: job 0:6837785272 is in state 'finished'
[2025-10-11 21:05:47] 2025-10-12 01:04:43,651 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 21:05:47] 2025-10-12 01:04:43,642 | INFO     | sum of deviations: 359603591399.58545
[2025-10-11 21:05:47] 2025-10-12 01:04:43,679 | INFO     | mean x: 1760206870.403287
[2025-10-11 21:05:47] 2025-10-12 01:04:43,680 | INFO     | mean y: 2097413.2364096083
[2025-10-11 21:05:47] 2025-10-12 01:04:43,680 | INFO     | -- intersect: -4122465699.46983
[2025-10-11 21:05:47] 2025-10-12 01:04:43,680 | INFO     | intersect: -4122465699.46983
[2025-10-11 21:05:47] 2025-10-12 01:04:43,907 | INFO     | chi2: 2.427437847593499
[2025-10-11 21:05:47] 2025-10-12 01:04:43,908 | INFO     | current chi2=2.427437847593499 (change=13.085811097898524 %)
[2025-10-11 21:05:47] 2025-10-12 01:04:43,908 | INFO     | left removable region: 50
[2025-10-11 21:05:47] 2025-10-12 01:04:43,934 | INFO     | sum of square deviations: 136119883482.39977
[2025-10-11 21:05:47] 2025-10-12 01:04:44,232 | INFO     | sum of deviations: 232880097695.39987
[2025-10-11 21:05:47] 2025-10-12 01:04:44,232 | INFO     | mean x: 1760207449.9
[2025-10-11 21:05:47] 2025-10-12 01:04:44,256 | INFO     | mean y: 2112983.1763157896
[2025-10-11 21:05:47] 2025-10-12 01:04:44,256 | INFO     | -- intersect: -3009330109.5580735
[2025-10-11 21:05:47] 2025-10-12 01:04:44,265 | INFO     | intersect: -3009330109.5580735
[2025-10-11 21:05:47] 2025-10-12 01:04:44,291 | INFO     | chi2: 0.4178492933852853
[2025-10-11 21:05:47] 2025-10-12 01:04:44,292 | INFO     | -- intersect: -3009330109.5580735
[2025-10-11 21:05:47] 2025-10-12 01:04:44,292 | INFO     | current memory leak: 1.71 B/s (using 760 data points, chi2=0.42)
[2025-10-11 21:05:47] 2025-10-12 01:04:44,326 | INFO     | could have reported an average CPU frequency of 999 MHz (30 samples)
[2025-10-11 21:05:47] 2025-10-12 01:04:44,326 | INFO     | ..............................
[2025-10-11 21:05:47] 2025-10-12 01:04:44,327 | INFO     | . Timing measurements:
[2025-10-11 21:05:47] 2025-10-12 01:04:44,327 | INFO     | . get job = 0 s
[2025-10-11 21:05:47] 2025-10-12 01:04:44,327 | INFO     | . initial setup = 13 s
[2025-10-11 21:05:47] 2025-10-12 01:04:44,327 | INFO     | . payload setup = 75 s
[2025-10-11 21:05:47] 2025-10-12 01:04:44,328 | INFO     | . stage-in = 2 s
[2025-10-11 21:05:47] 2025-10-12 01:04:44,328 | INFO     | . payload execution = 49796 s
[2025-10-11 21:05:47] 2025-10-12 01:04:44,328 | INFO     | . stage-out = 21 s
[2025-10-11 21:05:47] 2025-10-12 01:04:44,328 | INFO     | . log creation = 2 s
[2025-10-11 21:05:47] 2025-10-12 01:04:44,328 | INFO     | ..............................
[2025-10-11 21:05:47] 2025-10-12 01:04:45,709 | INFO     | time since job start (50089s) is within the limit (172800.0s)
[2025-10-11 21:05:47] 2025-10-12 01:04:45,766 | INFO     | 
[2025-10-11 21:05:47] 2025-10-12 01:04:45,767 | INFO     | job summary report
[2025-10-11 21:05:47] 2025-10-12 01:04:45,793 | INFO     | --------------------------------------------------
[2025-10-11 21:05:47] 2025-10-12 01:04:45,794 | INFO     | PanDA job id: 6837785272
[2025-10-11 21:05:47] 2025-10-12 01:04:45,794 | INFO     | task id: 46676269
[2025-10-11 21:05:47] 2025-10-12 01:04:45,794 | INFO     | errors: (none)
[2025-10-11 21:05:47] 2025-10-12 01:04:45,794 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 21:05:47] 2025-10-12 01:04:45,795 | INFO     | pilot state: finished 
[2025-10-11 21:05:47] 2025-10-12 01:04:45,795 | INFO     | transexitcode: 0
[2025-10-11 21:05:47] 2025-10-12 01:04:45,795 | INFO     | exeerrorcode: 0
[2025-10-11 21:05:47] 2025-10-12 01:04:45,795 | INFO     | exeerrordiag: 
[2025-10-11 21:05:47] 2025-10-12 01:04:45,796 | INFO     | exitcode: 0
[2025-10-11 21:05:47] 2025-10-12 01:04:45,796 | INFO     | exitmsg: OK
[2025-10-11 21:05:47] 2025-10-12 01:04:45,796 | INFO     | cpuconsumptiontime: 115639 s
[2025-10-11 21:05:47] 2025-10-12 01:04:45,796 | INFO     | nevents: 400
[2025-10-11 21:05:47] 2025-10-12 01:04:45,796 | INFO     | neventsw: 0
[2025-10-11 21:05:47] 2025-10-12 01:04:45,797 | INFO     | pid: 2983546
[2025-10-11 21:05:47] 2025-10-12 01:04:45,825 | INFO     | pgrp: 2983546
[2025-10-11 21:05:47] 2025-10-12 01:04:45,825 | INFO     | corecount: 8
[2025-10-11 21:05:47] 2025-10-12 01:04:45,826 | INFO     | event service: False
[2025-10-11 21:05:47] 2025-10-12 01:04:45,826 | INFO     | sizes: {0: 2348029, 1: 2348630, 3: 2348714, 7: 2348770, 8: 2348770, 10: 2349097, 22: 2349097, 34: 2349125, 45: 2349153, 60: 2349383, 61: 2349471, 72: 2349779, 4987
[2025-10-11 21:05:47] 2025-10-12 01:04:45,826 | INFO     | --------------------------------------------------
[2025-10-11 21:05:47] 2025-10-12 01:04:45,826 | INFO     | 
[2025-10-11 21:05:47] 2025-10-12 01:04:45,827 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-11 21:05:47] 2025-10-12 01:04:46,187 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 21:05:47] 2025-10-12 01:04:46,187 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 21:05:47] 2025-10-12 01:04:46,188 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 21:05:47] 2025-10-12 01:04:46,188 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 21:05:47] 2025-10-12 01:04:46,188 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 21:05:47] 2025-10-12 01:04:46,188 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 21:05:47] 2025-10-12 01:04:46,188 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 21:05:47] 2025-10-12 01:04:46,189 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 21:05:47] 2025-10-12 01:04:46,189 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 21:05:47] 2025-10-12 01:04:46,189 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 21:05:47] 2025-10-12 01:04:46,189 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 21:05:47] 2025-10-12 01:04:46,190 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 21:05:47] 2025-10-12 01:04:46,190 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 21:05:47] 2025-10-12 01:04:46,198 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 21:05:47] 2025-10-12 01:04:46,199 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 21:05:47] 2025-10-12 01:04:46,199 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 21:05:47] 2025-10-12 01:04:46,199 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 21:05:47] 2025-10-12 01:04:46,199 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 21:05:47] 2025-10-12 01:04:46,199 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 21:05:47] 2025-10-12 01:04:46,200 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 21:05:47] 2025-10-12 01:04:46,216 | INFO     | job 6837785272 has completed (purged errors)
[2025-10-11 21:05:47] 2025-10-12 01:04:46,216 | INFO     | overall cleanup function is called
[2025-10-11 21:05:47] 2025-10-12 01:04:47,241 | INFO     | --- collectZombieJob: --- 10, [2983546]
[2025-10-11 21:05:47] 2025-10-12 01:04:47,242 | INFO     | zombie collector waiting for pid 2983546
[2025-10-11 21:05:47] 2025-10-12 01:04:47,246 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 21:05:47] 2025-10-12 01:04:47,246 | INFO     | collected zombie processes
[2025-10-11 21:05:47] 2025-10-12 01:04:47,247 | INFO     | will attempt to kill all subprocesses of pid=2983546
[2025-10-11 21:05:47] 2025-10-12 01:04:53,307 | INFO     | process IDs to be killed: [2983546] (in reverse order)
[2025-10-11 21:05:47] 2025-10-12 01:04:53,961 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 21:05:47] 2025-10-12 01:04:53,962 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 21:05:47] 2025-10-12 01:04:54,541 | INFO     | did not find any defunct processes belonging to 2983546
[2025-10-11 21:05:47] 2025-10-12 01:04:54,979 | INFO     | did not find any defunct processes belonging to 2983546
[2025-10-11 21:05:47] 2025-10-12 01:04:54,980 | INFO     | ready for new job
[2025-10-11 21:05:47] 2025-10-12 01:04:54,980 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 21:05:47] 2025-10-12 01:04:55,110 | INFO     | ***************************************
[2025-10-11 21:05:47] 2025-10-12 01:04:55,111 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 21:05:47] 2025-10-12 01:04:55,111 | INFO     | ***************************************
[2025-10-11 21:05:47] 2025-10-12 01:04:55,111 | INFO     | 
[2025-10-11 21:05:47] 2025-10-12 01:04:55,241 | INFO     | architecture information:
[2025-10-11 21:05:47] 2025-10-12 01:04:55,293 | INFO     | executing command: cat /etc/os-release
[2025-10-11 21:05:47] 2025-10-12 01:04:55,529 | INFO     | cat /etc/os-release:
[2025-10-11 21:05:47] NAME="CentOS Linux"
[2025-10-11 21:05:47] VERSION="7 (Core)"
[2025-10-11 21:05:47] ID="centos"
[2025-10-11 21:05:47] ID_LIKE="rhel fedora"
[2025-10-11 21:05:47] VERSION_ID="7"
[2025-10-11 21:05:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 21:05:47] ANSI_COLOR="0;31"
[2025-10-11 21:05:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 21:05:47] HOME_URL="https://www.centos.org/"
[2025-10-11 21:05:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 21:05:47] 
[2025-10-11 21:05:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 21:05:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 21:05:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 21:05:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 21:05:47] 
[2025-10-11 21:05:47] 2025-10-12 01:04:55,530 | INFO     | ***************************************
[2025-10-11 21:05:47] 2025-10-12 01:04:56,040 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-11 21:05:47] 2025-10-12 01:04:56,186 | INFO     | sufficient remaining disk space (93821337600 B)
[2025-10-11 21:05:47] 2025-10-12 01:04:56,187 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 21:05:47] 2025-10-12 01:04:56,188 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 21:05:47] 2025-10-12 01:04:56,188 | INFO     | update_server=False
[2025-10-11 21:05:47] 2025-10-12 01:04:56,188 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 21:05:47] 2025-10-12 01:04:56,438 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 21:05:47] 2025-10-12 01:04:56,439 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 21:05:47] 2025-10-12 01:04:56,439 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 21:05:47] 2025-10-12 01:04:56,439 | INFO     | will abort loop
[2025-10-11 21:05:47] 2025-10-12 01:04:56,879 | INFO     | all data control threads have been joined
[2025-10-11 21:05:47] 2025-10-12 01:04:56,974 | INFO     | all payload control threads have been joined
[2025-10-11 21:05:47] 2025-10-12 01:04:57,194 | INFO     | [job] retrieve thread has finished
[2025-10-11 21:05:47] 2025-10-12 01:04:57,218 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 21:05:47] 2025-10-12 01:04:57,466 | INFO     | [job] job monitor thread has finished
[2025-10-11 21:05:47] 2025-10-12 01:04:57,620 | INFO     | all job control threads have been joined
[2025-10-11 21:05:47] 2025-10-12 01:04:57,910 | INFO     | [data] control thread has finished
[2025-10-11 21:05:47] 2025-10-12 01:04:57,921 | INFO     | [payload] failed_post thread has finished
[2025-10-11 21:05:47] 2025-10-12 01:04:57,980 | INFO     | [payload] control thread has finished
[2025-10-11 21:05:47] 2025-10-12 01:04:58,520 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 21:05:47] 2025-10-12 01:04:58,522 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 21:05:47] 2025-10-12 01:04:58,529 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 21:05:47] 2025-10-12 01:04:58,536 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 21:05:47] 2025-10-12 01:04:58,539 | INFO     | [data] copytool_in thread has finished
[2025-10-11 21:05:47] 2025-10-12 01:04:58,561 | INFO     | [job] validate thread has finished
[2025-10-11 21:05:47] 2025-10-12 01:04:58,632 | INFO     | [job] control thread has finished
[2025-10-11 21:05:47] 2025-10-12 01:04:58,659 | INFO     | [payload] validate_post thread has finished
[2025-10-11 21:05:47] 2025-10-12 01:04:58,823 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 21:05:47] 2025-10-12 01:04:59,243 | INFO     | [data] copytool_out thread has finished
[2025-10-11 21:05:47] 2025-10-12 01:04:59,601 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 21:05:47] 2025-10-12 01:04:59,830 | INFO     | [job] queue monitor thread has finished
[2025-10-11 21:05:47] 2025-10-12 01:05:03,610 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 21:05:47] 2025-10-12 01:05:30,561 | INFO     | PID=2963145 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 21:05:47] 2025-10-12 01:05:30,562 | INFO     | .. there are 31 such processes running
[2025-10-11 21:05:47] 2025-10-12 01:05:30,577 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 21:05:47] 2025-10-12 01:05:30,578 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 21:05:47] 2025-10-12 01:05:30,578 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 21:05:47] 2025-10-12 01:05:34,630 | INFO     | [monitor] cgroup control has ended
[2025-10-11 21:05:47] 2025-10-12 01:05:35,393 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140497838974784)>', '<ExcThread(monitor, started 140497037293312)>']
[2025-10-11 21:05:47] 2025-10-12 01:05:35,608 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 21:05:47] 2025-10-12 01:05:35,609 | INFO     | [monitor] control thread has ended
[2025-10-11 21:05:47] 2025-10-12 01:05:40,442 | INFO     | all workflow threads have been joined
[2025-10-11 21:05:47] 2025-10-12 01:05:40,442 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 21:05:47] 2025-10-12 01:05:40,443 | INFO     | traces error code: 0
[2025-10-11 21:05:47] 2025-10-12 01:05:40,444 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 21:05:47] 2025-10-12 01:05:44,437 [wrapper] ==== pilot stdout END ====
[2025-10-11 21:05:47] 2025-10-12 01:05:44,443 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 21:05:47] 2025-10-12 01:05:44,450 [wrapper] pilotpid: 2963145
[2025-10-11 21:05:47] 2025-10-12 01:05:44,456 [wrapper] Pilot exit status: 0
[2025-10-11 21:05:47] 2025-10-12 01:05:44,614 [wrapper] pandaids: 6837785272
[2025-10-11 21:05:47] 2025-10-12 01:05:46,215 [wrapper] cleanup supervisor_pilot  789243 2963146
[2025-10-11 21:05:47] 2025-10-12 01:05:46,275 [wrapper] Test setup, not cleaning
[2025-10-11 21:05:47] 2025-10-12 01:05:46,320 [wrapper] apfmon messages muted
[2025-10-11 21:05:47] 2025-10-12 01:05:46,371 [wrapper] ==== wrapper stdout END ====
[2025-10-11 21:05:47] 2025-10-12 01:05:46,424 [wrapper] ==== wrapper stderr END ====
[2025-10-11 21:05:47]  *** Error codes and diagnostics ***
[2025-10-11 21:05:47]     "exeErrorCode": 0,
[2025-10-11 21:05:47]     "exeErrorDiag": "",
[2025-10-11 21:05:47]     "pilotErrorCode": 0,
[2025-10-11 21:05:47]     "pilotErrorDiag": "",
[2025-10-11 21:05:47]  *** Listing of results directory ***
[2025-10-11 21:05:48] total 415656
[2025-10-11 21:05:48] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 16:48 pilot3.tar.gz
[2025-10-11 21:05:48] -rwx------. 1 boincer umatlas     36292 Oct 10 16:53 runpilot2-wrapper.sh
[2025-10-11 21:05:48] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 16:53 queuedata.json
[2025-10-11 21:05:48] -rw-r--r--. 1 boincer umatlas       100 Oct 11 07:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 21:05:48] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 07:08 run_atlas
[2025-10-11 21:05:48] -rw-r--r--. 1 boincer umatlas       105 Oct 11 07:08 job.xml
[2025-10-11 21:05:48] -rw-r--r--. 2 boincer umatlas 222912432 Oct 11 07:08 EVNT.46676267._001824.pool.root.1
[2025-10-11 21:05:48] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 07:08 start_atlas.sh
[2025-10-11 21:05:48] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 07:08 shared
[2025-10-11 21:05:48] -rw-r--r--. 2 boincer umatlas    569674 Oct 11 07:08 input.tar.gz
[2025-10-11 21:05:48] -rw-r--r--. 1 boincer umatlas         0 Oct 11 07:08 boinc_lockfile
[2025-10-11 21:05:48] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 07:08 pandaJob.out
[2025-10-11 21:05:48] -rw-------. 1 boincer umatlas    975517 Oct 11 07:09 agis_schedconf.cvmfs.json
[2025-10-11 21:05:48] drwx------. 5 boincer umatlas      4096 Oct 11 07:09 pilot3
[2025-10-11 21:05:48] -rw-------. 1 boincer umatlas 188013557 Oct 11 21:00 HITS.46676269._045103.pool.root.1
[2025-10-11 21:05:48] -rw-r--r--. 1 boincer umatlas       532 Oct 11 21:00 boinc_task_state.xml
[2025-10-11 21:05:48] -rw-r--r--. 1 boincer umatlas      6859 Oct 11 21:02 init_data.xml
[2025-10-11 21:05:48] -rw-------. 1 boincer umatlas      1043 Oct 11 21:03 memory_monitor_summary.json
[2025-10-11 21:05:48] -rw-------. 1 boincer umatlas   1560580 Oct 11 21:03 agis_ddmendpoints.agis.ALL.json
[2025-10-11 21:05:48] -rw-------. 1 boincer umatlas    812964 Oct 11 21:03 log.46676269._045103.job.log.tgz.1
[2025-10-11 21:05:48] -rw-------. 1 boincer umatlas        95 Oct 11 21:04 pilot_heartbeat.json
[2025-10-11 21:05:48] -rw-------. 1 boincer umatlas      7837 Oct 11 21:04 heartbeat.json
[2025-10-11 21:05:48] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 21:05 boinc_mmap_file
[2025-10-11 21:05:48] -rw-r--r--. 1 boincer umatlas        29 Oct 11 21:05 wrapper_checkpoint.txt
[2025-10-11 21:05:48] -rw-------. 1 boincer umatlas      5010 Oct 11 21:05 pilotlog.txt
[2025-10-11 21:05:48] -rw-------. 1 boincer umatlas   4588713 Oct 11 21:05 log.46676269._045103.job.log.1
[2025-10-11 21:05:48] -rw-------. 1 boincer umatlas       357 Oct 11 21:05 output.list
[2025-10-11 21:05:48] -rw-r--r--. 1 boincer umatlas       620 Oct 11 21:05 runtime_log
[2025-10-11 21:05:48] -rw-------. 1 boincer umatlas   5416960 Oct 11 21:05 result.tar.gz
[2025-10-11 21:05:48] -rw-r--r--. 1 boincer umatlas      8714 Oct 11 21:05 runtime_log.err
[2025-10-11 21:05:48] -rw-------. 1 boincer umatlas       662 Oct 11 21:05 PLtMDmWIZR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8QeNDmdu4UVn.diag
[2025-10-11 21:05:48] -rw-r--r--. 1 boincer umatlas     21317 Oct 11 21:05 stderr.txt
[2025-10-11 21:05:48] HITS file was successfully produced:
[2025-10-11 21:05:48] -rw-------. 1 boincer umatlas 188013557 Oct 11 21:00 shared/HITS.pool.root.1
[2025-10-11 21:05:48]  *** Contents of shared directory: ***
[2025-10-11 21:05:48] total 407172
[2025-10-11 21:05:48] -rw-r--r--. 2 boincer umatlas 222912432 Oct 11 07:08 ATLAS.root_0
[2025-10-11 21:05:48] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 07:08 start_atlas.sh
[2025-10-11 21:05:48] -rw-r--r--. 2 boincer umatlas    569674 Oct 11 07:08 input.tar.gz
[2025-10-11 21:05:48] -rw-------. 1 boincer umatlas 188013557 Oct 11 21:00 HITS.pool.root.1
[2025-10-11 21:05:48] -rw-------. 1 boincer umatlas   5416960 Oct 11 21:05 result.tar.gz
21:06:10 (2956973): run_atlas exited; CPU time 119970.193510
21:06:10 (2956973): called boinc_finish(0)

</stderr_txt>
]]>

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