Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:11:04 (12803): wrapper (7.7.26015): starting
06:11:04 (12803): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 06:11:04] Arguments: --nthreads 8
[2025-10-11 06:11:04] Threads: 8
[2025-10-11 06:11:04] Checking for CVMFS
[2025-10-11 06:11:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 06:11:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 06:11:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 06:11:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 06:11:04] 2.11.2.0 2777 221304 118844 151580 0 56 14302734 20275201 1 130560 2 76846521 99.974 14166940 12092 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 06:11:04] CVMFS is ok
[2025-10-11 06:11:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 06:11:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 06:11:04] Further information can be found at the LHC@home message board.
[2025-10-11 06:11:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 06:11:04] Checking for apptainer binary...
[2025-10-11 06:11:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 06:11:04] Running /usr/bin/apptainer --version
[2025-10-11 06:11:04] apptainer version 1.3.2-1.el7
[2025-10-11 06:11:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 06:11:06] c-204-9.aglt2.org
[2025-10-11 06:11:06] apptainer works
[2025-10-11 06:11:06] Set ATHENA_PROC_NUMBER=8
[2025-10-11 06:11:06] Set ATHENA_CORE_NUMBER=8
[2025-10-11 06:11:06] Starting ATLAS job with PandaID=6838067986
[2025-10-11 06:11:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 08:17:41]  *** The last 200 lines of the pilot log: ***
[2025-10-11 08:17:41] 2025-10-11 12:16:42,524 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 08:17:41] 2025-10-11 12:16:42,527 | INFO     | fitting pss+swap vs Time
[2025-10-11 08:17:41] 2025-10-11 12:16:42,528 | INFO     | sum of square deviations: 576985702.0
[2025-10-11 08:17:41] 2025-10-11 12:16:42,529 | INFO     | sum of deviations: 16201454087.999996
[2025-10-11 08:17:41] 2025-10-11 12:16:42,529 | INFO     | mean x: 1760181237.0
[2025-10-11 08:17:41] 2025-10-11 12:16:42,529 | INFO     | mean y: 2485642.951219512
[2025-10-11 08:17:41] 2025-10-11 12:16:42,529 | INFO     | -- intersect: -49422474800.547844
[2025-10-11 08:17:41] 2025-10-11 12:16:42,529 | INFO     | intersect: -49422474800.547844
[2025-10-11 08:17:41] 2025-10-11 12:16:42,530 | INFO     | chi2: 1.4447937054640942
[2025-10-11 08:17:41] 2025-10-11 12:16:42,530 | INFO     | sum of square deviations: 509440249.5
[2025-10-11 08:17:41] 2025-10-11 12:16:42,531 | INFO     | sum of deviations: 15462786117.0
[2025-10-11 08:17:41] 2025-10-11 12:16:42,531 | INFO     | mean x: 1760181084.5
[2025-10-11 08:17:41] 2025-10-11 12:16:42,531 | INFO     | mean y: 2483978.2033898304
[2025-10-11 08:17:41] 2025-10-11 12:16:42,531 | INFO     | -- intersect: -53423415650.90042
[2025-10-11 08:17:41] 2025-10-11 12:16:42,531 | INFO     | intersect: -53423415650.90042
[2025-10-11 08:17:41] 2025-10-11 12:16:42,532 | INFO     | chi2: 1.4465160926355016
[2025-10-11 08:17:41] 2025-10-11 12:16:42,532 | INFO     | current chi2=1.4465160926355016 (change=-0.11921336346451743 %)
[2025-10-11 08:17:41] 2025-10-11 12:16:42,532 | INFO     | right removable region: 117
[2025-10-11 08:17:41] 2025-10-11 12:16:42,532 | INFO     | sum of square deviations: 509440249.5
[2025-10-11 08:17:41] 2025-10-11 12:16:42,533 | INFO     | sum of deviations: -2120533026.4999995
[2025-10-11 08:17:41] 2025-10-11 12:16:42,533 | INFO     | mean x: 1760181389.5
[2025-10-11 08:17:41] 2025-10-11 12:16:42,533 | INFO     | mean y: 2526296.381355932
[2025-10-11 08:17:41] 2025-10-11 12:16:42,533 | INFO     | -- intersect: 7329239827.023598
[2025-10-11 08:17:41] 2025-10-11 12:16:42,533 | INFO     | intersect: 7329239827.023598
[2025-10-11 08:17:41] 2025-10-11 12:16:42,534 | INFO     | chi2: 0.05794466657583956
[2025-10-11 08:17:41] 2025-10-11 12:16:42,534 | INFO     | current chi2=0.05794466657583956 (change=95.9894159036894 %)
[2025-10-11 08:17:41] 2025-10-11 12:16:42,534 | INFO     | sum of square deviations: 447383272.0
[2025-10-11 08:17:41] 2025-10-11 12:16:42,534 | INFO     | sum of deviations: -5281290879.0
[2025-10-11 08:17:41] 2025-10-11 12:16:42,535 | INFO     | mean x: 1760181542.0
[2025-10-11 08:17:41] 2025-10-11 12:16:42,535 | INFO     | mean y: 2533926.7168141594
[2025-10-11 08:17:41] 2025-10-11 12:16:42,535 | INFO     | -- intersect: 20781206945.91892
[2025-10-11 08:17:41] 2025-10-11 12:16:42,535 | INFO     | intersect: 20781206945.91892
[2025-10-11 08:17:41] 2025-10-11 12:16:42,535 | INFO     | chi2: 0.010203233754425943
[2025-10-11 08:17:41] 2025-10-11 12:16:42,535 | INFO     | current chi2=0.010203233754425943 (change=82.39141864580121 %)
[2025-10-11 08:17:41] 2025-10-11 12:16:42,536 | INFO     | sum of square deviations: 390582207.0
[2025-10-11 08:17:41] 2025-10-11 12:16:42,536 | INFO     | sum of deviations: -5131550427.5
[2025-10-11 08:17:41] 2025-10-11 12:16:42,536 | INFO     | mean x: 1760181694.5
[2025-10-11 08:17:41] 2025-10-11 12:16:42,536 | INFO     | mean y: 2533511.935185185
[2025-10-11 08:17:41] 2025-10-11 12:16:42,536 | INFO     | -- intersect: 23128167411.81519
[2025-10-11 08:17:41] 2025-10-11 12:16:42,537 | INFO     | intersect: 23128167411.81519
[2025-10-11 08:17:41] 2025-10-11 12:16:42,537 | INFO     | chi2: 0.009270143672484294
[2025-10-11 08:17:41] 2025-10-11 12:16:42,537 | INFO     | current chi2=0.009270143672484294 (change=9.145042683520748 %)
[2025-10-11 08:17:41] 2025-10-11 12:16:42,537 | INFO     | left removable region: 30
[2025-10-11 08:17:41] 2025-10-11 12:16:42,537 | INFO     | sum of square deviations: 204163828.0
[2025-10-11 08:17:41] 2025-10-11 12:16:42,538 | INFO     | sum of deviations: -3181091501.0000005
[2025-10-11 08:17:41] 2025-10-11 12:16:42,538 | INFO     | mean x: 1760181969.0
[2025-10-11 08:17:41] 2025-10-11 12:16:42,538 | INFO     | mean y: 2527440.7011494255
[2025-10-11 08:17:41] 2025-10-11 12:16:42,538 | INFO     | -- intersect: 27428051132.38735
[2025-10-11 08:17:41] 2025-10-11 12:16:42,538 | INFO     | intersect: 27428051132.38735
[2025-10-11 08:17:41] 2025-10-11 12:16:42,538 | INFO     | chi2: 0.007906867122743884
[2025-10-11 08:17:41] 2025-10-11 12:16:42,539 | INFO     | -- intersect: 27428051132.38735
[2025-10-11 08:17:41] 2025-10-11 12:16:42,539 | INFO     | current memory leak: -15.58 B/s (using 87 data points, chi2=0.01)
[2025-10-11 08:17:41] 2025-10-11 12:16:42,539 | INFO     | could have reported an average CPU frequency of 1985 MHz (8 samples)
[2025-10-11 08:17:41] 2025-10-11 12:16:42,539 | INFO     | ..............................
[2025-10-11 08:17:41] 2025-10-11 12:16:42,539 | INFO     | . Timing measurements:
[2025-10-11 08:17:41] 2025-10-11 12:16:42,539 | INFO     | . get job = 0 s
[2025-10-11 08:17:41] 2025-10-11 12:16:42,540 | INFO     | . initial setup = 2 s
[2025-10-11 08:17:41] 2025-10-11 12:16:42,540 | INFO     | . payload setup = 8 s
[2025-10-11 08:17:41] 2025-10-11 12:16:42,540 | INFO     | . stage-in = 0 s
[2025-10-11 08:17:41] 2025-10-11 12:16:42,540 | INFO     | . payload execution = 7479 s
[2025-10-11 08:17:41] 2025-10-11 12:16:42,540 | INFO     | . stage-out = 0 s
[2025-10-11 08:17:41] 2025-10-11 12:16:42,540 | INFO     | . log creation = 0 s
[2025-10-11 08:17:41] 2025-10-11 12:16:42,540 | INFO     | ..............................
[2025-10-11 08:17:41] 2025-10-11 12:16:42,634 | INFO     | 
[2025-10-11 08:17:41] 2025-10-11 12:16:42,634 | INFO     | job summary report
[2025-10-11 08:17:41] 2025-10-11 12:16:42,634 | INFO     | --------------------------------------------------
[2025-10-11 08:17:41] 2025-10-11 12:16:42,634 | INFO     | PanDA job id: 6838067986
[2025-10-11 08:17:41] 2025-10-11 12:16:42,634 | INFO     | task id: 46676269
[2025-10-11 08:17:41] 2025-10-11 12:16:42,634 | INFO     | errors: (none)
[2025-10-11 08:17:41] 2025-10-11 12:16:42,634 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 08:17:41] 2025-10-11 12:16:42,634 | INFO     | pilot state: finished 
[2025-10-11 08:17:41] 2025-10-11 12:16:42,635 | INFO     | transexitcode: 0
[2025-10-11 08:17:41] 2025-10-11 12:16:42,635 | INFO     | exeerrorcode: 0
[2025-10-11 08:17:41] 2025-10-11 12:16:42,635 | INFO     | exeerrordiag: 
[2025-10-11 08:17:41] 2025-10-11 12:16:42,635 | INFO     | exitcode: 0
[2025-10-11 08:17:41] 2025-10-11 12:16:42,635 | INFO     | exitmsg: OK
[2025-10-11 08:17:41] 2025-10-11 12:16:42,635 | INFO     | cpuconsumptiontime: 55412 s
[2025-10-11 08:17:41] 2025-10-11 12:16:42,635 | INFO     | nevents: 400
[2025-10-11 08:17:41] 2025-10-11 12:16:42,635 | INFO     | neventsw: 0
[2025-10-11 08:17:41] 2025-10-11 12:16:42,635 | INFO     | pid: 22914
[2025-10-11 08:17:41] 2025-10-11 12:16:42,636 | INFO     | pgrp: 22914
[2025-10-11 08:17:41] 2025-10-11 12:16:42,636 | INFO     | corecount: 8
[2025-10-11 08:17:41] 2025-10-11 12:16:42,636 | INFO     | event service: False
[2025-10-11 08:17:41] 2025-10-11 12:16:42,636 | INFO     | sizes: {0: 2348630, 1: 2348885, 7: 2349147, 12: 2349175, 7492: 2376721, 7493: 2376720, 7494: 2385902, 7496: 2385958, 7502: 2386152}
[2025-10-11 08:17:41] 2025-10-11 12:16:42,636 | INFO     | --------------------------------------------------
[2025-10-11 08:17:41] 2025-10-11 12:16:42,636 | INFO     | 
[2025-10-11 08:17:41] 2025-10-11 12:16:42,636 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 08:17:41] 2025-10-11 12:16:42,667 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 08:17:41] 2025-10-11 12:16:42,667 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 08:17:41] 2025-10-11 12:16:42,668 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 08:17:41] 2025-10-11 12:16:42,668 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 08:17:41] 2025-10-11 12:16:42,668 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 08:17:41] 2025-10-11 12:16:42,668 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 08:17:41] 2025-10-11 12:16:42,668 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 08:17:41] 2025-10-11 12:16:42,669 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 08:17:41] 2025-10-11 12:16:42,669 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 08:17:41] 2025-10-11 12:16:42,669 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 08:17:41] 2025-10-11 12:16:42,669 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 08:17:41] 2025-10-11 12:16:42,669 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 08:17:41] 2025-10-11 12:16:42,670 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 08:17:41] 2025-10-11 12:16:42,670 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 08:17:41] 2025-10-11 12:16:42,670 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 08:17:41] 2025-10-11 12:16:42,670 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 08:17:41] 2025-10-11 12:16:42,670 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 08:17:41] 2025-10-11 12:16:42,670 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 08:17:41] 2025-10-11 12:16:42,671 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 08:17:41] 2025-10-11 12:16:42,671 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 08:17:41] 2025-10-11 12:16:42,671 | INFO     | job 6838067986 has completed (purged errors)
[2025-10-11 08:17:41] 2025-10-11 12:16:42,671 | INFO     | overall cleanup function is called
[2025-10-11 08:17:41] 2025-10-11 12:16:43,679 | INFO     | --- collectZombieJob: --- 10, [22914]
[2025-10-11 08:17:41] 2025-10-11 12:16:43,679 | INFO     | zombie collector waiting for pid 22914
[2025-10-11 08:17:41] 2025-10-11 12:16:43,680 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 08:17:41] 2025-10-11 12:16:43,680 | INFO     | collected zombie processes
[2025-10-11 08:17:41] 2025-10-11 12:16:43,680 | INFO     | will attempt to kill all subprocesses of pid=22914
[2025-10-11 08:17:41] 2025-10-11 12:16:43,770 | INFO     | process IDs to be killed: [22914] (in reverse order)
[2025-10-11 08:17:41] 2025-10-11 12:16:43,826 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 08:17:41] 2025-10-11 12:16:43,826 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 08:17:41] 2025-10-11 12:16:43,830 | INFO     | did not find any defunct processes belonging to 22914
[2025-10-11 08:17:41] 2025-10-11 12:16:43,833 | INFO     | did not find any defunct processes belonging to 22914
[2025-10-11 08:17:41] 2025-10-11 12:16:43,833 | INFO     | ready for new job
[2025-10-11 08:17:41] 2025-10-11 12:16:43,834 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 08:17:41] 2025-10-11 12:16:43,835 | INFO     | ***************************************
[2025-10-11 08:17:41] 2025-10-11 12:16:43,835 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 08:17:41] 2025-10-11 12:16:43,835 | INFO     | ***************************************
[2025-10-11 08:17:41] 2025-10-11 12:16:43,835 | INFO     | 
[2025-10-11 08:17:41] 2025-10-11 12:16:43,836 | INFO     | architecture information:
[2025-10-11 08:17:41] 2025-10-11 12:16:43,837 | INFO     | executing command: cat /etc/os-release
[2025-10-11 08:17:41] 2025-10-11 12:16:43,854 | INFO     | cat /etc/os-release:
[2025-10-11 08:17:41] NAME="CentOS Linux"
[2025-10-11 08:17:41] VERSION="7 (Core)"
[2025-10-11 08:17:41] ID="centos"
[2025-10-11 08:17:41] ID_LIKE="rhel fedora"
[2025-10-11 08:17:41] VERSION_ID="7"
[2025-10-11 08:17:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 08:17:41] ANSI_COLOR="0;31"
[2025-10-11 08:17:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 08:17:41] HOME_URL="https://www.centos.org/"
[2025-10-11 08:17:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 08:17:41] 
[2025-10-11 08:17:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 08:17:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 08:17:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 08:17:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 08:17:41] 
[2025-10-11 08:17:41] 2025-10-11 12:16:43,855 | INFO     | ***************************************
[2025-10-11 08:17:41] 2025-10-11 12:16:44,358 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 08:17:41] 2025-10-11 12:16:44,378 | INFO     | sufficient remaining disk space (18576572416 B)
[2025-10-11 08:17:41] 2025-10-11 12:16:44,378 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 08:17:41] 2025-10-11 12:16:44,378 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 08:17:41] 2025-10-11 12:16:44,379 | INFO     | update_server=False
[2025-10-11 08:17:41] 2025-10-11 12:16:44,379 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 08:17:41] 2025-10-11 12:16:44,379 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 08:17:41] 2025-10-11 12:16:44,444 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 08:17:41] 2025-10-11 12:16:44,444 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 08:17:41] 2025-10-11 12:16:44,445 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 08:17:41] 2025-10-11 12:16:44,445 | INFO     | will abort loop
[2025-10-11 08:17:41] 2025-10-11 12:16:44,515 | INFO     | all data control threads have been joined
[2025-10-11 08:17:41] 2025-10-11 12:16:45,005 | INFO     | all payload control threads have been joined
[2025-10-11 08:17:41] 2025-10-11 12:16:45,284 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 08:17:41] 2025-10-11 12:16:45,384 | INFO     | [job] retrieve thread has finished
[2025-10-11 08:17:41] 2025-10-11 12:16:45,385 | INFO     | [job] queue monitor thread has finished
[2025-10-11 08:17:41] 2025-10-11 12:16:45,449 | INFO     | [job] job monitor thread has finished
[2025-10-11 08:17:41] 2025-10-11 12:16:45,521 | INFO     | [data] control thread has finished
[2025-10-11 08:17:41] 2025-10-11 12:16:45,637 | INFO     | all job control threads have been joined
[2025-10-11 08:17:41] 2025-10-11 12:16:45,986 | INFO     | [payload] validate_post thread has finished
[2025-10-11 08:17:41] 2025-10-11 12:16:46,010 | INFO     | [payload] control thread has finished
[2025-10-11 08:17:41] 2025-10-11 12:16:46,039 | INFO     | [payload] failed_post thread has finished
[2025-10-11 08:17:41] 2025-10-11 12:16:46,040 | INFO     | [job] validate thread has finished
[2025-10-11 08:17:41] 2025-10-11 12:16:46,173 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 08:17:41] 2025-10-11 12:16:46,443 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 08:17:41] 2025-10-11 12:16:46,458 | INFO     | [data] copytool_in thread has finished
[2025-10-11 08:17:41] 2025-10-11 12:16:46,538 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 08:17:41] 2025-10-11 12:16:46,640 | INFO     | [job] control thread has finished
[2025-10-11 08:17:41] 2025-10-11 12:16:47,218 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 08:17:41] 2025-10-11 12:16:47,289 | INFO     | [data] copytool_out thread has finished
[2025-10-11 08:17:41] 2025-10-11 12:16:51,225 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 08:17:41] 2025-10-11 12:16:54,525 | INFO     | job.realtimelogging is not enabled
[2025-10-11 08:17:41] 2025-10-11 12:16:55,529 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 08:17:41] 2025-10-11 12:17:14,454 | INFO     | PID=16544 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 08:17:41] 2025-10-11 12:17:14,455 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 08:17:41] 2025-10-11 12:17:14,455 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 08:17:41] 2025-10-11 12:17:14,455 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 08:17:41] 2025-10-11 12:17:35,747 | INFO     | [monitor] cgroup control has ended
[2025-10-11 08:17:41] 2025-10-11 12:17:35,893 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140468801312576)>', '<ExcThread(monitor, started 140468356630272)>']
[2025-10-11 08:17:41] 2025-10-11 12:17:36,555 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 08:17:41] 2025-10-11 12:17:36,555 | INFO     | [monitor] control thread has ended
[2025-10-11 08:17:41] 2025-10-11 12:17:40,920 | INFO     | all workflow threads have been joined
[2025-10-11 08:17:41] 2025-10-11 12:17:40,927 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 08:17:41] 2025-10-11 12:17:40,928 | INFO     | traces error code: 0
[2025-10-11 08:17:41] 2025-10-11 12:17:40,928 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 08:17:41] 2025-10-11 12:17:41,058 [wrapper] ==== pilot stdout END ====
[2025-10-11 08:17:41] 2025-10-11 12:17:41,063 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 08:17:41] 2025-10-11 12:17:41,067 [wrapper] pilotpid: 16544
[2025-10-11 08:17:41] 2025-10-11 12:17:41,071 [wrapper] Pilot exit status: 0
[2025-10-11 08:17:41] 2025-10-11 12:17:41,090 [wrapper] pandaids: 6838067986
[2025-10-11 08:17:41] 2025-10-11 12:17:41,147 [wrapper] cleanup supervisor_pilot 12639 16545
[2025-10-11 08:17:41] 2025-10-11 12:17:41,152 [wrapper] Test setup, not cleaning
[2025-10-11 08:17:41] 2025-10-11 12:17:41,157 [wrapper] apfmon messages muted
[2025-10-11 08:17:41] 2025-10-11 12:17:41,162 [wrapper] ==== wrapper stdout END ====
[2025-10-11 08:17:41] 2025-10-11 12:17:41,167 [wrapper] ==== wrapper stderr END ====
[2025-10-11 08:17:41]  *** Error codes and diagnostics ***
[2025-10-11 08:17:41]     "exeErrorCode": 0,
[2025-10-11 08:17:41]     "exeErrorDiag": "",
[2025-10-11 08:17:41]     "pilotErrorCode": 0,
[2025-10-11 08:17:41]     "pilotErrorDiag": "",
[2025-10-11 08:17:41]  *** Listing of results directory ***
[2025-10-11 08:17:41] total 417036
[2025-10-11 08:17:41] -rw-r--r-- 1 boincer umatlas    557409 Oct 10 23:42 pilot3.tar.gz
[2025-10-11 08:17:41] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 00:13 queuedata.json
[2025-10-11 08:17:41] -rwx------ 1 boincer umatlas     36292 Oct 11 00:14 runpilot2-wrapper.sh
[2025-10-11 08:17:41] -rw-r--r-- 1 boincer umatlas       100 Oct 11 06:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 08:17:41] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 06:11 run_atlas
[2025-10-11 08:17:41] -rw-r--r-- 1 boincer umatlas       105 Oct 11 06:11 job.xml
[2025-10-11 08:17:41] -rw-r--r-- 2 boincer umatlas 222703135 Oct 11 06:11 EVNT.46676267._002061.pool.root.1
[2025-10-11 08:17:41] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 06:11 start_atlas.sh
[2025-10-11 08:17:41] drwxrwx--x 2 boincer umatlas      4096 Oct 11 06:11 shared
[2025-10-11 08:17:41] -rw-r--r-- 2 boincer umatlas    569683 Oct 11 06:11 input.tar.gz
[2025-10-11 08:17:41] -rw-r--r-- 1 boincer umatlas         0 Oct 11 06:11 boinc_lockfile
[2025-10-11 08:17:41] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 06:11 pandaJob.out
[2025-10-11 08:17:41] -rw------- 1 boincer umatlas    975525 Oct 11 06:11 agis_schedconf.cvmfs.json
[2025-10-11 08:17:41] -rw------- 1 boincer umatlas   1560580 Oct 11 06:11 agis_ddmendpoints.agis.ALL.json
[2025-10-11 08:17:41] drwx------ 5 boincer umatlas      4096 Oct 11 06:11 pilot3
[2025-10-11 08:17:41] -rw-r--r-- 1 boincer umatlas      5908 Oct 11 08:12 init_data.xml
[2025-10-11 08:17:41] -rw------- 1 boincer umatlas 197553673 Oct 11 08:15 HITS.46676269._051237.pool.root.1
[2025-10-11 08:17:41] -rw-r--r-- 1 boincer umatlas       530 Oct 11 08:16 boinc_task_state.xml
[2025-10-11 08:17:41] -rw------- 1 boincer umatlas      1051 Oct 11 08:16 memory_monitor_summary.json
[2025-10-11 08:17:41] -rw------- 1 boincer umatlas    380737 Oct 11 08:16 log.46676269._051237.job.log.tgz.1
[2025-10-11 08:17:41] -rw------- 1 boincer umatlas      7851 Oct 11 08:16 heartbeat.json
[2025-10-11 08:17:41] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 08:17 boinc_mmap_file
[2025-10-11 08:17:41] -rw-r--r-- 1 boincer umatlas        27 Oct 11 08:17 wrapper_checkpoint.txt
[2025-10-11 08:17:41] -rw------- 1 boincer umatlas        95 Oct 11 08:17 pilot_heartbeat.json
[2025-10-11 08:17:41] -rw------- 1 boincer umatlas      5004 Oct 11 08:17 pilotlog.txt
[2025-10-11 08:17:41] -rw------- 1 boincer umatlas   1061135 Oct 11 08:17 log.46676269._051237.job.log.1
[2025-10-11 08:17:41] -rw------- 1 boincer umatlas       357 Oct 11 08:17 output.list
[2025-10-11 08:17:41] -rw-r--r-- 1 boincer umatlas       620 Oct 11 08:17 runtime_log
[2025-10-11 08:17:41] -rw------- 1 boincer umatlas   1464320 Oct 11 08:17 result.tar.gz
[2025-10-11 08:17:41] -rw-r--r-- 1 boincer umatlas      8698 Oct 11 08:17 runtime_log.err
[2025-10-11 08:17:41] -rw------- 1 boincer umatlas       658 Oct 11 08:17 BuHNDmzAgR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm8DRMDmhyUUWm.diag
[2025-10-11 08:17:41] -rw-r--r-- 1 boincer umatlas     20907 Oct 11 08:17 stderr.txt
[2025-10-11 08:17:41] HITS file was successfully produced:
[2025-10-11 08:17:41] -rw------- 1 boincer umatlas 197553673 Oct 11 08:15 shared/HITS.pool.root.1
[2025-10-11 08:17:41]  *** Contents of shared directory: ***
[2025-10-11 08:17:41] total 412420
[2025-10-11 08:17:41] -rw-r--r-- 2 boincer umatlas 222703135 Oct 11 06:11 ATLAS.root_0
[2025-10-11 08:17:41] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 06:11 start_atlas.sh
[2025-10-11 08:17:41] -rw-r--r-- 2 boincer umatlas    569683 Oct 11 06:11 input.tar.gz
[2025-10-11 08:17:41] -rw------- 1 boincer umatlas 197553673 Oct 11 08:15 HITS.pool.root.1
[2025-10-11 08:17:41] -rw------- 1 boincer umatlas   1464320 Oct 11 08:17 result.tar.gz
08:17:43 (12803): run_atlas exited; CPU time 55351.099661
08:17:43 (12803): called boinc_finish(0)

</stderr_txt>
]]>

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