Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:56:55 (2486918): wrapper (7.7.26015): starting
07:56:55 (2486918): wrapper: running run_atlas (--nthreads 9)
[2025-10-11 07:56:55] Arguments: --nthreads 9
[2025-10-11 07:56:55] Threads: 9
[2025-10-11 07:56:55] Checking for CVMFS
[2025-10-11 07:56:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 07:56:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 07:56:56] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 07:56:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 07:56:57] 2.13.2.0 3576101 127772 524620 151583 3 102 32840406 40960001 33974 16776704 52 260217561 99.680 235460489 21449 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 07:56:57] CVMFS is ok
[2025-10-11 07:56:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 07:56:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 07:56:57] Further information can be found at the LHC@home message board.
[2025-10-11 07:56:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 07:56:57] Checking for apptainer binary...
[2025-10-11 07:56:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 07:56:57] Running /usr/bin/apptainer --version
[2025-10-11 07:56:57] apptainer version 1.4.3-1.el9
[2025-10-11 07:56:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 07:56:57] c7-11-12.aglt2.org
[2025-10-11 07:56:57] apptainer works
[2025-10-11 07:56:57] Set ATHENA_PROC_NUMBER=9
[2025-10-11 07:56:57] Set ATHENA_CORE_NUMBER=9
[2025-10-11 07:56:57] Starting ATLAS job with PandaID=6838068440
[2025-10-11 07:56:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 11:58:59]  *** The last 200 lines of the pilot log: ***
[2025-10-11 11:58:59] 2025-10-11 15:56:46,501 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 11:58:59] 2025-10-11 15:56:46,501 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 11:58:59] 2025-10-11 15:56:46,504 | INFO     | fitting pss+swap vs Time
[2025-10-11 11:58:59] 2025-10-11 15:56:46,505 | INFO     | sum of square deviations: 4024163904.8936133
[2025-10-11 11:58:59] 2025-10-11 15:56:46,506 | INFO     | sum of deviations: -3224406168.0638294
[2025-10-11 11:58:59] 2025-10-11 15:56:46,506 | INFO     | mean x: 1760191023.0212767
[2025-10-11 11:58:59] 2025-10-11 15:56:46,506 | INFO     | mean y: 2176906.6127659576
[2025-10-11 11:58:59] 2025-10-11 15:56:46,506 | INFO     | -- intersect: 1412549576.746447
[2025-10-11 11:58:59] 2025-10-11 15:56:46,507 | INFO     | intersect: 1412549576.746447
[2025-10-11 11:58:59] 2025-10-11 15:56:46,507 | INFO     | chi2: 2.705895619178158
[2025-10-11 11:58:59] 2025-10-11 15:56:46,507 | INFO     | sum of square deviations: 3772728157.391307
[2025-10-11 11:58:59] 2025-10-11 15:56:46,508 | INFO     | sum of deviations: 14316964309.869572
[2025-10-11 11:58:59] 2025-10-11 15:56:46,508 | INFO     | mean x: 1760190870.5217392
[2025-10-11 11:58:59] 2025-10-11 15:56:46,509 | INFO     | mean y: 2187393.0260869567
[2025-10-11 11:58:59] 2025-10-11 15:56:46,509 | INFO     | -- intersect: -6677485464.517726
[2025-10-11 11:58:59] 2025-10-11 15:56:46,509 | INFO     | intersect: -6677485464.517726
[2025-10-11 11:58:59] 2025-10-11 15:56:46,509 | INFO     | chi2: 1.8193554737700506
[2025-10-11 11:58:59] 2025-10-11 15:56:46,509 | INFO     | current chi2=1.8193554737700506 (change=32.763279526553575 %)
[2025-10-11 11:58:59] 2025-10-11 15:56:46,509 | INFO     | sum of square deviations: 3531976497.9289074
[2025-10-11 11:58:59] 2025-10-11 15:56:46,511 | INFO     | sum of deviations: 14674892764.235563
[2025-10-11 11:58:59] 2025-10-11 15:56:46,511 | INFO     | mean x: 1760190718.0177777
[2025-10-11 11:58:59] 2025-10-11 15:56:46,511 | INFO     | mean y: 2187620.191111111
[2025-10-11 11:58:59] 2025-10-11 15:56:46,511 | INFO     | -- intersect: -7311170791.638732
[2025-10-11 11:58:59] 2025-10-11 15:56:46,511 | INFO     | intersect: -7311170791.638732
[2025-10-11 11:58:59] 2025-10-11 15:56:46,511 | INFO     | chi2: 1.813830174712386
[2025-10-11 11:58:59] 2025-10-11 15:56:46,512 | INFO     | current chi2=1.813830174712386 (change=0.3036954095735433 %)
[2025-10-11 11:58:59] 2025-10-11 15:56:46,512 | INFO     | right removable region: 224
[2025-10-11 11:58:59] 2025-10-11 15:56:46,512 | INFO     | sum of square deviations: 3772725107.391307
[2025-10-11 11:58:59] 2025-10-11 15:56:46,513 | INFO     | sum of deviations: -36697059852.91306
[2025-10-11 11:58:59] 2025-10-11 15:56:46,513 | INFO     | mean x: 1760191175.5217392
[2025-10-11 11:58:59] 2025-10-11 15:56:46,513 | INFO     | mean y: 2197044.1826086957
[2025-10-11 11:58:59] 2025-10-11 15:56:46,513 | INFO     | -- intersect: 17123465910.059458
[2025-10-11 11:58:59] 2025-10-11 15:56:46,513 | INFO     | intersect: 17123465910.059458
[2025-10-11 11:58:59] 2025-10-11 15:56:46,514 | INFO     | chi2: 1.2390025654317647
[2025-10-11 11:58:59] 2025-10-11 15:56:46,514 | INFO     | current chi2=1.2390025654317647 (change=54.2109992473369 %)
[2025-10-11 11:58:59] 2025-10-11 15:56:46,514 | INFO     | sum of square deviations: 3531984184.888888
[2025-10-11 11:58:59] 2025-10-11 15:56:46,515 | INFO     | sum of deviations: -27108467213.733322
[2025-10-11 11:58:59] 2025-10-11 15:56:46,516 | INFO     | mean x: 1760191328.0222223
[2025-10-11 11:58:59] 2025-10-11 15:56:46,516 | INFO     | mean y: 2190965.3466666667
[2025-10-11 11:58:59] 2025-10-11 15:56:46,516 | INFO     | -- intersect: 13511902902.82784
[2025-10-11 11:58:59] 2025-10-11 15:56:46,516 | INFO     | intersect: 13511902902.82784
[2025-10-11 11:58:59] 2025-10-11 15:56:46,516 | INFO     | chi2: 1.1871225981946054
[2025-10-11 11:58:59] 2025-10-11 15:56:46,516 | INFO     | current chi2=1.1871225981946054 (change=4.187236466219927 %)
[2025-10-11 11:58:59] 2025-10-11 15:56:46,516 | INFO     | left removable region: 20
[2025-10-11 11:58:59] 2025-10-11 15:56:46,517 | INFO     | sum of square deviations: 2632438716.9215846
[2025-10-11 11:58:59] 2025-10-11 15:56:46,518 | INFO     | sum of deviations: 6147729524.284315
[2025-10-11 11:58:59] 2025-10-11 15:56:46,518 | INFO     | mean x: 1760191297.5196078
[2025-10-11 11:58:59] 2025-10-11 15:56:46,518 | INFO     | mean y: 2191384.0539215687
[2025-10-11 11:58:59] 2025-10-11 15:56:46,518 | INFO     | -- intersect: -4108514000.496898
[2025-10-11 11:58:59] 2025-10-11 15:56:46,518 | INFO     | intersect: -4108514000.496898
[2025-10-11 11:58:59] 2025-10-11 15:56:46,518 | INFO     | chi2: 0.10578325526759795
[2025-10-11 11:58:59] 2025-10-11 15:56:46,518 | INFO     | -- intersect: -4108514000.496898
[2025-10-11 11:58:59] 2025-10-11 15:56:46,518 | INFO     | current memory leak: 2.34 B/s (using 204 data points, chi2=0.11)
[2025-10-11 11:58:59] 2025-10-11 15:56:46,519 | INFO     | could have reported an average CPU frequency of 3281 MHz (11 samples)
[2025-10-11 11:58:59] 2025-10-11 15:56:46,519 | INFO     | ..............................
[2025-10-11 11:58:59] 2025-10-11 15:56:46,519 | INFO     | . Timing measurements:
[2025-10-11 11:58:59] 2025-10-11 15:56:46,519 | INFO     | . get job = 0 s
[2025-10-11 11:58:59] 2025-10-11 15:56:46,519 | INFO     | . initial setup = 3 s
[2025-10-11 11:58:59] 2025-10-11 15:56:46,519 | INFO     | . payload setup = 13 s
[2025-10-11 11:58:59] 2025-10-11 15:56:46,519 | INFO     | . stage-in = 0 s
[2025-10-11 11:58:59] 2025-10-11 15:56:46,519 | INFO     | . payload execution = 14315 s
[2025-10-11 11:58:59] 2025-10-11 15:56:46,519 | INFO     | . stage-out = 2 s
[2025-10-11 11:58:59] 2025-10-11 15:56:46,519 | INFO     | . log creation = 0 s
[2025-10-11 11:58:59] 2025-10-11 15:56:46,520 | INFO     | ..............................
[2025-10-11 11:58:59] 2025-10-11 15:56:46,602 | INFO     | 
[2025-10-11 11:58:59] 2025-10-11 15:56:46,602 | INFO     | job summary report
[2025-10-11 11:58:59] 2025-10-11 15:56:46,602 | INFO     | --------------------------------------------------
[2025-10-11 11:58:59] 2025-10-11 15:56:46,602 | INFO     | PanDA job id: 6838068440
[2025-10-11 11:58:59] 2025-10-11 15:56:46,602 | INFO     | task id: 46676269
[2025-10-11 11:58:59] 2025-10-11 15:56:46,602 | INFO     | errors: (none)
[2025-10-11 11:58:59] 2025-10-11 15:56:46,602 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 11:58:59] 2025-10-11 15:56:46,603 | INFO     | pilot state: finished 
[2025-10-11 11:58:59] 2025-10-11 15:56:46,603 | INFO     | transexitcode: 0
[2025-10-11 11:58:59] 2025-10-11 15:56:46,603 | INFO     | exeerrorcode: 0
[2025-10-11 11:58:59] 2025-10-11 15:56:46,603 | INFO     | exeerrordiag: 
[2025-10-11 11:58:59] 2025-10-11 15:56:46,603 | INFO     | exitcode: 0
[2025-10-11 11:58:59] 2025-10-11 15:56:46,603 | INFO     | exitmsg: OK
[2025-10-11 11:58:59] 2025-10-11 15:56:46,603 | INFO     | cpuconsumptiontime: 33126 s
[2025-10-11 11:58:59] 2025-10-11 15:56:46,603 | INFO     | nevents: 400
[2025-10-11 11:58:59] 2025-10-11 15:56:46,603 | INFO     | neventsw: 0
[2025-10-11 11:58:59] 2025-10-11 15:56:46,603 | INFO     | pid: 2498364
[2025-10-11 11:58:59] 2025-10-11 15:56:46,603 | INFO     | pgrp: 2498364
[2025-10-11 11:58:59] 2025-10-11 15:56:46,603 | INFO     | corecount: 9
[2025-10-11 11:58:59] 2025-10-11 15:56:46,603 | INFO     | event service: False
[2025-10-11 11:58:59] 2025-10-11 15:56:46,603 | INFO     | sizes: {0: 2348857, 9: 2349119, 11: 2349147, 14332: 2380366, 14335: 2389420, 14344: 2389558}
[2025-10-11 11:58:59] 2025-10-11 15:56:46,603 | INFO     | --------------------------------------------------
[2025-10-11 11:58:59] 2025-10-11 15:56:46,604 | INFO     | 
[2025-10-11 11:58:59] 2025-10-11 15:56:46,604 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-11 11:58:59] 2025-10-11 15:56:46,631 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 11:58:59] 2025-10-11 15:56:46,631 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 11:58:59] 2025-10-11 15:56:46,631 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 11:58:59] 2025-10-11 15:56:46,632 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 11:58:59] 2025-10-11 15:56:46,632 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 11:58:59] 2025-10-11 15:56:46,632 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 11:58:59] 2025-10-11 15:56:46,632 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 11:58:59] 2025-10-11 15:56:46,632 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 11:58:59] 2025-10-11 15:56:46,632 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 11:58:59] 2025-10-11 15:56:46,632 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 11:58:59] 2025-10-11 15:56:46,632 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 11:58:59] 2025-10-11 15:56:46,632 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 11:58:59] 2025-10-11 15:56:46,632 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 11:58:59] 2025-10-11 15:56:46,632 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 11:58:59] 2025-10-11 15:56:46,632 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 11:58:59] 2025-10-11 15:56:46,632 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 11:58:59] 2025-10-11 15:56:46,632 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 11:58:59] 2025-10-11 15:56:46,632 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 11:58:59] 2025-10-11 15:56:46,633 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 11:58:59] 2025-10-11 15:56:46,633 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 11:58:59] 2025-10-11 15:56:46,633 | INFO     | job 6838068440 has completed (purged errors)
[2025-10-11 11:58:59] 2025-10-11 15:56:46,633 | INFO     | overall cleanup function is called
[2025-10-11 11:58:59] 2025-10-11 15:56:47,642 | INFO     | --- collectZombieJob: --- 10, [2498364]
[2025-10-11 11:58:59] 2025-10-11 15:56:47,642 | INFO     | zombie collector waiting for pid 2498364
[2025-10-11 11:58:59] 2025-10-11 15:56:47,642 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 11:58:59] 2025-10-11 15:56:47,642 | INFO     | collected zombie processes
[2025-10-11 11:58:59] 2025-10-11 15:56:47,642 | INFO     | will attempt to kill all subprocesses of pid=2498364
[2025-10-11 11:58:59] 2025-10-11 15:56:48,097 | INFO     | process IDs to be killed: [2498364] (in reverse order)
[2025-10-11 11:58:59] 2025-10-11 15:56:48,255 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 11:58:59] 2025-10-11 15:56:48,256 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 11:58:59] 2025-10-11 15:56:48,275 | INFO     | did not find any defunct processes belonging to 2498364
[2025-10-11 11:58:59] 2025-10-11 15:56:48,295 | INFO     | did not find any defunct processes belonging to 2498364
[2025-10-11 11:58:59] 2025-10-11 15:56:48,295 | INFO     | ready for new job
[2025-10-11 11:58:59] 2025-10-11 15:56:48,295 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 11:58:59] 2025-10-11 15:56:48,297 | INFO     | ***************************************
[2025-10-11 11:58:59] 2025-10-11 15:56:48,297 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-11 11:58:59] 2025-10-11 15:56:48,297 | INFO     | ***************************************
[2025-10-11 11:58:59] 2025-10-11 15:56:48,297 | INFO     | 
[2025-10-11 11:58:59] 2025-10-11 15:56:48,312 | INFO     | architecture information:
[2025-10-11 11:58:59] 2025-10-11 15:56:48,315 | INFO     | executing command: cat /etc/os-release
[2025-10-11 11:58:59] 2025-10-11 15:56:48,335 | INFO     | cat /etc/os-release:
[2025-10-11 11:58:59] NAME="CentOS Linux"
[2025-10-11 11:58:59] VERSION="7 (Core)"
[2025-10-11 11:58:59] ID="centos"
[2025-10-11 11:58:59] ID_LIKE="rhel fedora"
[2025-10-11 11:58:59] VERSION_ID="7"
[2025-10-11 11:58:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 11:58:59] ANSI_COLOR="0;31"
[2025-10-11 11:58:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 11:58:59] HOME_URL="https://www.centos.org/"
[2025-10-11 11:58:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 11:58:59] 
[2025-10-11 11:58:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 11:58:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 11:58:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 11:58:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 11:58:59] 
[2025-10-11 11:58:59] 2025-10-11 15:56:48,335 | INFO     | ***************************************
[2025-10-11 11:58:59] 2025-10-11 15:56:48,839 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-11 11:58:59] 2025-10-11 15:56:48,858 | INFO     | sufficient remaining disk space (84241547264 B)
[2025-10-11 11:58:59] 2025-10-11 15:56:48,859 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 11:58:59] 2025-10-11 15:56:48,859 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 11:58:59] 2025-10-11 15:56:48,859 | INFO     | update_server=False
[2025-10-11 11:58:59] 2025-10-11 15:56:48,859 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 11:58:59] 2025-10-11 15:56:48,859 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 11:58:59] 2025-10-11 15:56:48,860 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 11:58:59] 2025-10-11 15:56:48,860 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 11:58:59] 2025-10-11 15:56:48,860 | INFO     | aborting loop
[2025-10-11 11:58:59] 2025-10-11 15:56:49,040 | INFO     | all data control threads have been joined
[2025-10-11 11:58:59] 2025-10-11 15:56:49,182 | INFO     | all job control threads have been joined
[2025-10-11 11:58:59] 2025-10-11 15:56:49,870 | INFO     | [job] retrieve thread has finished
[2025-10-11 11:58:59] 2025-10-11 15:56:49,886 | INFO     | [job] job monitor thread has finished
[2025-10-11 11:58:59] 2025-10-11 15:56:49,911 | INFO     | all payload control threads have been joined
[2025-10-11 11:58:59] 2025-10-11 15:56:50,046 | INFO     | [data] control thread has finished
[2025-10-11 11:58:59] 2025-10-11 15:56:50,096 | INFO     | [data] copytool_in thread has finished
[2025-10-11 11:58:59] 2025-10-11 15:56:50,097 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 11:58:59] 2025-10-11 15:56:50,189 | INFO     | [job] control thread has finished
[2025-10-11 11:58:59] 2025-10-11 15:56:50,546 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 11:58:59] 2025-10-11 15:56:50,646 | INFO     | [payload] validate_post thread has finished
[2025-10-11 11:58:59] 2025-10-11 15:56:50,701 | INFO     | [payload] failed_post thread has finished
[2025-10-11 11:58:59] 2025-10-11 15:56:50,871 | INFO     | [data] copytool_out thread has finished
[2025-10-11 11:58:59] 2025-10-11 15:56:50,917 | INFO     | [payload] control thread has finished
[2025-10-11 11:58:59] 2025-10-11 15:56:51,121 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 11:58:59] 2025-10-11 15:56:51,190 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 11:58:59] 2025-10-11 15:56:51,194 | INFO     | [job] validate thread has finished
[2025-10-11 11:58:59] 2025-10-11 15:56:51,617 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 11:58:59] 2025-10-11 15:56:52,622 | INFO     | [job] queue monitor thread has finished
[2025-10-11 11:58:59] 2025-10-11 15:56:52,881 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 11:58:59] 2025-10-11 15:57:18,410 [wrapper] supervise_pilot (15 min periods counter: 17)
[2025-10-11 11:58:59] 2025-10-11 15:57:18,996 | INFO     | PID=2491053 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 11:58:59] 2025-10-11 15:57:18,996 | INFO     | .. there are 45 such processes running
[2025-10-11 11:58:59] 2025-10-11 15:57:18,996 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 11:58:59] 2025-10-11 15:57:18,996 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 11:58:59] 2025-10-11 15:57:18,996 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 11:58:59] 2025-10-11 15:57:45,776 | INFO     | [monitor] cgroup control has ended
[2025-10-11 11:58:59] 2025-10-11 15:57:47,587 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139852542240576)>', '<ExcThread(monitor, started 139851902998272)>']
[2025-10-11 11:58:59] 2025-10-11 15:57:48,194 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 11:58:59] 2025-10-11 15:57:48,195 | INFO     | [monitor] control thread has ended
[2025-10-11 11:58:59] 2025-10-11 15:57:52,613 | INFO     | all workflow threads have been joined
[2025-10-11 11:58:59] 2025-10-11 15:57:52,613 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 11:58:59] 2025-10-11 15:57:52,613 | INFO     | traces error code: 0
[2025-10-11 11:58:59] 2025-10-11 15:57:52,614 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 11:58:59] 2025-10-11 15:57:52,828 [wrapper] ==== pilot stdout END ====
[2025-10-11 11:58:59] 2025-10-11 15:57:52,832 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 11:58:59] 2025-10-11 15:57:52,837 [wrapper] pilotpid: 2491053
[2025-10-11 11:58:59] 2025-10-11 15:57:52,864 [wrapper] Pilot exit status: 0
[2025-10-11 11:58:59] 2025-10-11 15:57:52,940 [wrapper] pandaids: 6838068440
[2025-10-11 11:58:59] 2025-10-11 15:57:53,064 [wrapper] cleanup supervisor_pilot 3332489 2491054
[2025-10-11 11:58:59] 2025-10-11 15:57:53,066 [wrapper] Test setup, not cleaning
[2025-10-11 11:58:59] 2025-10-11 15:57:53,069 [wrapper] apfmon messages muted
[2025-10-11 11:58:59] 2025-10-11 15:57:53,072 [wrapper] ==== wrapper stdout END ====
[2025-10-11 11:58:59] 2025-10-11 15:57:53,075 [wrapper] ==== wrapper stderr END ====
[2025-10-11 11:58:59]  *** Error codes and diagnostics ***
[2025-10-11 11:58:59]     "exeErrorCode": 0,
[2025-10-11 11:58:59]     "exeErrorDiag": "",
[2025-10-11 11:58:59]     "pilotErrorCode": 0,
[2025-10-11 11:58:59]     "pilotErrorDiag": "",
[2025-10-11 11:58:59]  *** Listing of results directory ***
[2025-10-11 11:58:59] total 419240
[2025-10-11 11:58:59] -rw-r--r--. 1 boincer umatlas    563267 Oct  7 03:02 pilot3.tar.gz
[2025-10-11 11:58:59] -rwx------. 1 boincer umatlas     36292 Oct 11 00:15 runpilot2-wrapper.sh
[2025-10-11 11:58:59] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 00:15 queuedata.json
[2025-10-11 11:58:59] -rw-r--r--. 1 boincer umatlas       100 Oct 11 07:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 11:58:59] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 07:56 run_atlas
[2025-10-11 11:58:59] -rw-r--r--. 1 boincer umatlas       105 Oct 11 07:56 job.xml
[2025-10-11 11:58:59] -rw-r--r--. 2 boincer umatlas 220822638 Oct 11 07:56 EVNT.46676267._002065.pool.root.1
[2025-10-11 11:58:59] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 07:56 start_atlas.sh
[2025-10-11 11:58:59] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 07:56 shared
[2025-10-11 11:58:59] -rw-r--r--. 2 boincer umatlas    576708 Oct 11 07:56 input.tar.gz
[2025-10-11 11:58:59] -rw-r--r--. 1 boincer umatlas         0 Oct 11 07:56 boinc_lockfile
[2025-10-11 11:58:59] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 07:56 pandaJob.out
[2025-10-11 11:58:59] -rw-------. 1 boincer umatlas    975509 Oct 11 07:57 agis_schedconf.cvmfs.json
[2025-10-11 11:58:59] drwx------. 4 boincer umatlas      4096 Oct 11 07:57 pilot3
[2025-10-11 11:58:59] -rw-------. 1 boincer umatlas 199771248 Oct 11 11:55 HITS.46676269._051319.pool.root.1
[2025-10-11 11:58:59] -rw-r--r--. 1 boincer umatlas       529 Oct 11 11:56 boinc_task_state.xml
[2025-10-11 11:58:59] -rw-------. 1 boincer umatlas      1043 Oct 11 11:56 memory_monitor_summary.json
[2025-10-11 11:58:59] -rw-------. 1 boincer umatlas        95 Oct 11 11:56 pilot_heartbeat.json
[2025-10-11 11:58:59] -rw-------. 1 boincer umatlas   1560580 Oct 11 11:56 agis_ddmendpoints.agis.ALL.json
[2025-10-11 11:58:59] -rw-------. 1 boincer umatlas    471423 Oct 11 11:56 log.46676269._051319.job.log.tgz.1
[2025-10-11 11:58:59] -rw-------. 1 boincer umatlas      7800 Oct 11 11:56 heartbeat.json
[2025-10-11 11:58:59] -rw-------. 1 boincer umatlas      4824 Oct 11 11:57 pilotlog.txt
[2025-10-11 11:58:59] -rw-------. 1 boincer umatlas   1926013 Oct 11 11:57 log.46676269._051319.job.log.1
[2025-10-11 11:58:59] -rw-------. 1 boincer umatlas       357 Oct 11 11:57 output.list
[2025-10-11 11:58:59] -rw-r--r--. 1 boincer umatlas       620 Oct 11 11:57 runtime_log
[2025-10-11 11:58:59] -rw-------. 1 boincer umatlas   2416640 Oct 11 11:57 result.tar.gz
[2025-10-11 11:58:59] -rw-------. 1 boincer umatlas       659 Oct 11 11:57 sfUNDmxBgR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmBFRMDmhzhetm.diag
[2025-10-11 11:58:59] -rw-r--r--. 1 boincer umatlas      8704 Oct 11 11:57 runtime_log.err
[2025-10-11 11:58:59] -rw-r--r--. 1 boincer umatlas      6897 Oct 11 11:58 init_data.xml
[2025-10-11 11:58:59] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 11:58 boinc_mmap_file
[2025-10-11 11:58:59] -rw-r--r--. 1 boincer umatlas        27 Oct 11 11:58 wrapper_checkpoint.txt
[2025-10-11 11:58:59] -rw-r--r--. 1 boincer umatlas     20965 Oct 11 11:58 stderr.txt
[2025-10-11 11:58:59] HITS file was successfully produced:
[2025-10-11 11:58:59] -rw-------. 1 boincer umatlas 199771248 Oct 11 11:55 shared/HITS.pool.root.1
[2025-10-11 11:58:59]  *** Contents of shared directory: ***
[2025-10-11 11:58:59] total 413684
[2025-10-11 11:58:59] -rw-r--r--. 2 boincer umatlas 220822638 Oct 11 07:56 ATLAS.root_0
[2025-10-11 11:58:59] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 07:56 start_atlas.sh
[2025-10-11 11:58:59] -rw-r--r--. 2 boincer umatlas    576708 Oct 11 07:56 input.tar.gz
[2025-10-11 11:58:59] -rw-------. 1 boincer umatlas 199771248 Oct 11 11:55 HITS.pool.root.1
[2025-10-11 11:58:59] -rw-------. 1 boincer umatlas   2416640 Oct 11 11:57 result.tar.gz
11:59:01 (2486918): run_atlas exited; CPU time 33537.828623
11:59:01 (2486918): called boinc_finish(0)

</stderr_txt>
]]>

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