Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:07:37 (422553): wrapper (7.7.26015): starting
23:07:37 (422553): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 23:07:37] Arguments: --nthreads 4
[2025-10-12 23:07:37] Threads: 4
[2025-10-12 23:07:37] Checking for CVMFS
[2025-10-12 23:07:37] No cvmfs_config command found, will try listing directly
[2025-10-12 23:07:37] CVMFS is ok
[2025-10-12 23:07:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 23:07:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 23:07:37] Further information can be found at the LHC@home message board.
[2025-10-12 23:07:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 23:07:37] Checking for apptainer binary...
[2025-10-12 23:07:37] which: no apptainer in ((null))
[2025-10-12 23:07:37] apptainer is not installed, using version from CVMFS
[2025-10-12 23:07:37] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 23:07:37] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot120/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2025-10-12 23:07:37] apptainer works
[2025-10-12 23:07:37] Set ATHENA_PROC_NUMBER=4
[2025-10-12 23:07:37] Set ATHENA_CORE_NUMBER=4
[2025-10-12 23:07:37] Starting ATLAS job with PandaID=6838065246
[2025-10-12 23:07:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot120/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 01:51:25]  *** The last 200 lines of the pilot log: ***
[2025-10-13 01:51:25] 2025-10-12 23:45:37,483 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 01:51:25] 2025-10-12 23:45:37,483 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 01:51:25] 2025-10-12 23:45:37,486 | INFO     | fitting pss+swap vs Time
[2025-10-13 01:51:25] 2025-10-12 23:45:37,487 | INFO     | sum of square deviations: 1154663510.0
[2025-10-13 01:51:25] 2025-10-12 23:45:37,488 | INFO     | sum of deviations: 10406439143.000002
[2025-10-13 01:51:25] 2025-10-12 23:45:37,488 | INFO     | mean x: 1760308006.0
[2025-10-13 01:51:25] 2025-10-12 23:45:37,488 | INFO     | mean y: 2289226.0258064517
[2025-10-13 01:51:25] 2025-10-12 23:45:37,488 | INFO     | -- intersect: -15862538906.782064
[2025-10-13 01:51:25] 2025-10-12 23:45:37,488 | INFO     | intersect: -15862538906.782064
[2025-10-13 01:51:25] 2025-10-12 23:45:37,488 | INFO     | chi2: 1.9950986895817613
[2025-10-13 01:51:25] 2025-10-12 23:45:37,489 | INFO     | sum of square deviations: 1046484737.5
[2025-10-13 01:51:25] 2025-10-12 23:45:37,489 | INFO     | sum of deviations: 19469198559.5
[2025-10-13 01:51:25] 2025-10-12 23:45:37,489 | INFO     | mean x: 1760307853.5
[2025-10-13 01:51:25] 2025-10-12 23:45:37,490 | INFO     | mean y: 2301642.86
[2025-10-13 01:51:25] 2025-10-12 23:45:37,490 | INFO     | -- intersect: -32747132627.44988
[2025-10-13 01:51:25] 2025-10-12 23:45:37,490 | INFO     | intersect: -32747132627.44988
[2025-10-13 01:51:25] 2025-10-12 23:45:37,490 | INFO     | chi2: 1.1864109115303918
[2025-10-13 01:51:25] 2025-10-12 23:45:37,490 | INFO     | current chi2=1.1864109115303918 (change=40.53372308218483 %)
[2025-10-13 01:51:25] 2025-10-12 23:45:37,490 | INFO     | sum of square deviations: 945282840.0
[2025-10-13 01:51:25] 2025-10-12 23:45:37,491 | INFO     | sum of deviations: 18683566536.00001
[2025-10-13 01:51:25] 2025-10-12 23:45:37,491 | INFO     | mean x: 1760307701.0
[2025-10-13 01:51:25] 2025-10-12 23:45:37,491 | INFO     | mean y: 2300459.103448276
[2025-10-13 01:51:25] 2025-10-12 23:45:37,491 | INFO     | -- intersect: -34790276602.24119
[2025-10-13 01:51:25] 2025-10-12 23:45:37,492 | INFO     | intersect: -34790276602.24119
[2025-10-13 01:51:25] 2025-10-12 23:45:37,492 | INFO     | chi2: 1.1872540650805243
[2025-10-13 01:51:25] 2025-10-12 23:45:37,492 | INFO     | current chi2=1.1872540650805243 (change=-0.07106758222957707 %)
[2025-10-13 01:51:25] 2025-10-12 23:45:37,492 | INFO     | right removable region: 144
[2025-10-13 01:51:25] 2025-10-12 23:45:37,492 | INFO     | sum of square deviations: 1046484737.5
[2025-10-13 01:51:25] 2025-10-12 23:45:37,493 | INFO     | sum of deviations: -6645554018.5
[2025-10-13 01:51:25] 2025-10-12 23:45:37,493 | INFO     | mean x: 1760308158.5
[2025-10-13 01:51:25] 2025-10-12 23:45:37,493 | INFO     | mean y: 2312816.6066666665
[2025-10-13 01:51:25] 2025-10-12 23:45:37,493 | INFO     | -- intersect: 11180901989.788956
[2025-10-13 01:51:25] 2025-10-12 23:45:37,493 | INFO     | intersect: 11180901989.788956
[2025-10-13 01:51:25] 2025-10-12 23:45:37,494 | INFO     | chi2: 0.8325210463441504
[2025-10-13 01:51:25] 2025-10-12 23:45:37,494 | INFO     | current chi2=0.8325210463441504 (change=58.2716859726536 %)
[2025-10-13 01:51:25] 2025-10-12 23:45:37,494 | INFO     | sum of square deviations: 945282840.0
[2025-10-13 01:51:25] 2025-10-12 23:45:37,495 | INFO     | sum of deviations: -6754111357.0
[2025-10-13 01:51:25] 2025-10-12 23:45:37,495 | INFO     | mean x: 1760308311.0
[2025-10-13 01:51:25] 2025-10-12 23:45:37,495 | INFO     | mean y: 2312991.724137931
[2025-10-13 01:51:25] 2025-10-12 23:45:37,495 | INFO     | -- intersect: 12579837783.29508
[2025-10-13 01:51:25] 2025-10-12 23:45:37,495 | INFO     | intersect: 12579837783.29508
[2025-10-13 01:51:25] 2025-10-12 23:45:37,495 | INFO     | chi2: 0.8325219842468834
[2025-10-13 01:51:25] 2025-10-12 23:45:37,495 | INFO     | current chi2=0.8325219842468834 (change=-0.00011265814085448487 %)
[2025-10-13 01:51:25] 2025-10-12 23:45:37,495 | INFO     | left removable region: 20
[2025-10-13 01:51:25] 2025-10-12 23:45:37,496 | INFO     | sum of square deviations: 591173875.0
[2025-10-13 01:51:25] 2025-10-12 23:45:37,496 | INFO     | sum of deviations: 1271119616.4999998
[2025-10-13 01:51:25] 2025-10-12 23:45:37,496 | INFO     | mean x: 1760308280.5
[2025-10-13 01:51:25] 2025-10-12 23:45:37,496 | INFO     | mean y: 2328247.4919354836
[2025-10-13 01:51:25] 2025-10-12 23:45:37,497 | INFO     | -- intersect: -3782619770.434151
[2025-10-13 01:51:25] 2025-10-12 23:45:37,497 | INFO     | intersect: -3782619770.434151
[2025-10-13 01:51:25] 2025-10-12 23:45:37,497 | INFO     | chi2: 7.493589953567885e-05
[2025-10-13 01:51:25] 2025-10-12 23:45:37,497 | INFO     | -- intersect: -3782619770.434151
[2025-10-13 01:51:25] 2025-10-12 23:45:37,497 | INFO     | current memory leak: 2.15 B/s (using 124 data points, chi2=0.00)
[2025-10-13 01:51:25] 2025-10-12 23:45:37,497 | INFO     | could have reported an average CPU frequency of 2730 MHz (9 samples)
[2025-10-13 01:51:25] 2025-10-12 23:45:37,498 | INFO     | ..............................
[2025-10-13 01:51:25] 2025-10-12 23:45:37,498 | INFO     | . Timing measurements:
[2025-10-13 01:51:25] 2025-10-12 23:45:37,498 | INFO     | . get job = 0 s
[2025-10-13 01:51:25] 2025-10-12 23:45:37,498 | INFO     | . initial setup = 1 s
[2025-10-13 01:51:25] 2025-10-12 23:45:37,498 | INFO     | . payload setup = 9 s
[2025-10-13 01:51:25] 2025-10-12 23:45:37,498 | INFO     | . stage-in = 0 s
[2025-10-13 01:51:25] 2025-10-12 23:45:37,498 | INFO     | . payload execution = 9423 s
[2025-10-13 01:51:25] 2025-10-12 23:45:37,498 | INFO     | . stage-out = 0 s
[2025-10-13 01:51:25] 2025-10-12 23:45:37,498 | INFO     | . log creation = 0 s
[2025-10-13 01:51:25] 2025-10-12 23:45:37,499 | INFO     | ..............................
[2025-10-13 01:51:25] 2025-10-12 23:45:37,593 | INFO     | 
[2025-10-13 01:51:25] 2025-10-12 23:45:37,593 | INFO     | job summary report
[2025-10-13 01:51:25] 2025-10-12 23:45:37,593 | INFO     | --------------------------------------------------
[2025-10-13 01:51:25] 2025-10-12 23:45:37,593 | INFO     | PanDA job id: 6838065246
[2025-10-13 01:51:25] 2025-10-12 23:45:37,593 | INFO     | task id: 46676269
[2025-10-13 01:51:25] 2025-10-12 23:45:37,594 | INFO     | errors: (none)
[2025-10-13 01:51:25] 2025-10-12 23:45:37,594 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 01:51:25] 2025-10-12 23:45:37,594 | INFO     | pilot state: finished 
[2025-10-13 01:51:25] 2025-10-12 23:45:37,594 | INFO     | transexitcode: 0
[2025-10-13 01:51:25] 2025-10-12 23:45:37,594 | INFO     | exeerrorcode: 0
[2025-10-13 01:51:25] 2025-10-12 23:45:37,594 | INFO     | exeerrordiag: 
[2025-10-13 01:51:25] 2025-10-12 23:45:37,594 | INFO     | exitcode: 0
[2025-10-13 01:51:25] 2025-10-12 23:45:37,594 | INFO     | exitmsg: OK
[2025-10-13 01:51:25] 2025-10-12 23:45:37,594 | INFO     | cpuconsumptiontime: 36247 s
[2025-10-13 01:51:25] 2025-10-12 23:45:37,594 | INFO     | nevents: 400
[2025-10-13 01:51:25] 2025-10-12 23:45:37,594 | INFO     | neventsw: 0
[2025-10-13 01:51:25] 2025-10-12 23:45:37,594 | INFO     | pid: 512066
[2025-10-13 01:51:25] 2025-10-12 23:45:37,595 | INFO     | pgrp: 512066
[2025-10-13 01:51:25] 2025-10-12 23:45:37,595 | INFO     | corecount: 4
[2025-10-13 01:51:25] 2025-10-12 23:45:37,595 | INFO     | event service: False
[2025-10-13 01:51:25] 2025-10-12 23:45:37,595 | INFO     | sizes: {0: 2348755, 1: 2348897, 8: 2349159, 11: 2349187, 9437: 2377910, 9440: 2387116, 9446: 2387318}
[2025-10-13 01:51:25] 2025-10-12 23:45:37,595 | INFO     | --------------------------------------------------
[2025-10-13 01:51:25] 2025-10-12 23:45:37,595 | INFO     | 
[2025-10-13 01:51:25] 2025-10-12 23:45:37,595 | INFO     | executing command: ls -lF /scratch/boinc/var/slot120/slots/0
[2025-10-13 01:51:25] 2025-10-12 23:45:37,621 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 01:51:25] 2025-10-12 23:45:37,621 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 01:51:25] 2025-10-12 23:45:37,621 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 01:51:25] 2025-10-12 23:45:37,621 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 01:51:25] 2025-10-12 23:45:37,621 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 01:51:25] 2025-10-12 23:45:37,621 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 01:51:25] 2025-10-12 23:45:37,621 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 01:51:25] 2025-10-12 23:45:37,621 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 01:51:25] 2025-10-12 23:45:37,622 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 01:51:25] 2025-10-12 23:45:37,622 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 01:51:25] 2025-10-12 23:45:37,622 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 01:51:25] 2025-10-12 23:45:37,622 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 01:51:25] 2025-10-12 23:45:37,622 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 01:51:25] 2025-10-12 23:45:37,622 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 01:51:25] 2025-10-12 23:45:37,622 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 01:51:25] 2025-10-12 23:45:37,622 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 01:51:25] 2025-10-12 23:45:37,622 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 01:51:25] 2025-10-12 23:45:37,622 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 01:51:25] 2025-10-12 23:45:37,623 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 01:51:25] 2025-10-12 23:45:37,623 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 01:51:25] 2025-10-12 23:45:37,623 | INFO     | job 6838065246 has completed (purged errors)
[2025-10-13 01:51:25] 2025-10-12 23:45:37,623 | INFO     | overall cleanup function is called
[2025-10-13 01:51:25] 2025-10-12 23:45:38,632 | INFO     | --- collectZombieJob: --- 10, [512066]
[2025-10-13 01:51:25] 2025-10-12 23:45:38,632 | INFO     | zombie collector waiting for pid 512066
[2025-10-13 01:51:25] 2025-10-12 23:45:38,636 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 01:51:25] 2025-10-12 23:45:38,636 | INFO     | collected zombie processes
[2025-10-13 01:51:25] 2025-10-12 23:45:38,636 | INFO     | will attempt to kill all subprocesses of pid=512066
[2025-10-13 01:51:25] 2025-10-12 23:45:39,346 | INFO     | process IDs to be killed: [512066] (in reverse order)
[2025-10-13 01:51:25] 2025-10-12 23:45:39,577 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 01:51:25] 2025-10-12 23:45:39,577 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 01:51:25] 2025-10-12 23:45:39,608 | INFO     | did not find any defunct processes belonging to 512066
[2025-10-13 01:51:25] 2025-10-12 23:45:39,636 | INFO     | did not find any defunct processes belonging to 512066
[2025-10-13 01:51:25] 2025-10-12 23:45:39,636 | INFO     | ready for new job
[2025-10-13 01:51:25] 2025-10-12 23:45:39,637 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 01:51:25] 2025-10-12 23:45:39,639 | INFO     | ***************************************
[2025-10-13 01:51:25] 2025-10-12 23:45:39,639 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 01:51:25] 2025-10-12 23:45:39,639 | INFO     | ***************************************
[2025-10-13 01:51:25] 2025-10-12 23:45:39,640 | INFO     | 
[2025-10-13 01:51:25] 2025-10-12 23:45:39,647 | INFO     | architecture information:
[2025-10-13 01:51:25] 2025-10-12 23:45:39,648 | INFO     | executing command: cat /etc/os-release
[2025-10-13 01:51:25] 2025-10-12 23:45:39,670 | INFO     | cat /etc/os-release:
[2025-10-13 01:51:25] NAME="CentOS Linux"
[2025-10-13 01:51:25] VERSION="7 (Core)"
[2025-10-13 01:51:25] ID="centos"
[2025-10-13 01:51:25] ID_LIKE="rhel fedora"
[2025-10-13 01:51:25] VERSION_ID="7"
[2025-10-13 01:51:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 01:51:25] ANSI_COLOR="0;31"
[2025-10-13 01:51:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 01:51:25] HOME_URL="https://www.centos.org/"
[2025-10-13 01:51:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 01:51:25] 
[2025-10-13 01:51:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 01:51:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 01:51:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 01:51:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 01:51:25] 
[2025-10-13 01:51:25] 2025-10-12 23:45:39,670 | INFO     | ***************************************
[2025-10-13 01:51:25] 2025-10-12 23:45:40,172 | INFO     | executing command: df -mP /scratch/boinc/var/slot120/slots/0
[2025-10-13 01:51:25] 2025-10-12 23:45:40,195 | INFO     | sufficient remaining disk space (3337248309248 B)
[2025-10-13 01:51:25] 2025-10-12 23:45:40,195 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 01:51:25] 2025-10-12 23:45:40,195 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 01:51:25] 2025-10-12 23:45:40,195 | INFO     | update_server=False
[2025-10-13 01:51:25] 2025-10-12 23:45:40,195 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 01:51:25] 2025-10-12 23:45:40,196 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 01:51:25] 2025-10-12 23:45:40,196 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:51:25] 2025-10-12 23:45:40,197 | INFO     | aborting loop
[2025-10-13 01:51:25] 2025-10-12 23:45:41,115 | INFO     | all job control threads have been joined
[2025-10-13 01:51:25] 2025-10-12 23:45:41,150 | INFO     | all data control threads have been joined
[2025-10-13 01:51:25] 2025-10-12 23:45:41,201 | INFO     | [job] retrieve thread has finished
[2025-10-13 01:51:25] 2025-10-12 23:45:41,202 | INFO     | [job] job monitor thread has finished
[2025-10-13 01:51:25] 2025-10-12 23:45:41,224 | INFO     | all payload control threads have been joined
[2025-10-13 01:51:25] 2025-10-12 23:45:41,372 | INFO     | [payload] validate_post thread has finished
[2025-10-13 01:51:25] 2025-10-12 23:45:41,981 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 01:51:25] 2025-10-12 23:45:41,987 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 01:51:25] 2025-10-12 23:45:41,994 | INFO     | [data] copytool_in thread has finished
[2025-10-13 01:51:25] 2025-10-12 23:45:42,001 | INFO     | [payload] failed_post thread has finished
[2025-10-13 01:51:25] 2025-10-12 23:45:42,120 | INFO     | [job] control thread has finished
[2025-10-13 01:51:25] 2025-10-12 23:45:42,155 | INFO     | [data] control thread has finished
[2025-10-13 01:51:25] 2025-10-12 23:45:42,202 | INFO     | [data] copytool_out thread has finished
[2025-10-13 01:51:25] 2025-10-12 23:45:42,229 | INFO     | [payload] control thread has finished
[2025-10-13 01:51:25] 2025-10-12 23:45:42,272 | INFO     | [job] validate thread has finished
[2025-10-13 01:51:25] 2025-10-12 23:45:42,485 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 01:51:25] 2025-10-12 23:45:42,493 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 01:51:25] 2025-10-12 23:45:42,601 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:51:25] 2025-10-12 23:45:43,607 | INFO     | [job] queue monitor thread has finished
[2025-10-13 01:51:25] 2025-10-12 23:45:45,994 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 01:51:25] 2025-10-12 23:45:50,618 | INFO     | job.realtimelogging is not enabled
[2025-10-13 01:51:25] 2025-10-12 23:45:51,624 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 01:51:25] 2025-10-12 23:46:08,213 | INFO     | [monitor] cgroup control has ended
[2025-10-13 01:51:25] 2025-10-12 23:46:08,743 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23238407153472)>', '<ExcThread(monitor, started 23238159578880)>']
[2025-10-13 01:51:25] 2025-10-12 23:46:10,313 | INFO     | PID=451437 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 01:51:25] 2025-10-12 23:46:10,314 | INFO     | .. there are 7 such processes running
[2025-10-13 01:51:25] 2025-10-12 23:46:10,314 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 01:51:25] 2025-10-12 23:46:10,314 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 01:51:25] 2025-10-12 23:46:10,314 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 01:51:25] 2025-10-12 23:46:10,314 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 01:51:25] 2025-10-12 23:46:10,314 | INFO     | [monitor] control thread has ended
[2025-10-13 01:51:25] 2025-10-12 23:46:13,768 | INFO     | all workflow threads have been joined
[2025-10-13 01:51:25] 2025-10-12 23:46:13,769 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 01:51:25] 2025-10-12 23:46:13,769 | INFO     | traces error code: 0
[2025-10-13 01:51:25] 2025-10-12 23:46:13,769 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 01:51:25] 2025-10-12 23:46:13,948 [wrapper] ==== pilot stdout END ====
[2025-10-13 01:51:25] 2025-10-12 23:46:13,952 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 01:51:25] 2025-10-12 23:46:13,956 [wrapper] pilotpid: 451437
[2025-10-13 01:51:25] 2025-10-12 23:46:13,959 [wrapper] Pilot exit status: 0
[2025-10-13 01:51:25] 2025-10-12 23:46:13,971 [wrapper] pandaids: 6838065246
[2025-10-13 01:51:25] 2025-10-12 23:46:14,132 [wrapper] cleanup supervisor_pilot  786501 451439
[2025-10-13 01:51:25] 2025-10-12 23:46:14,136 [wrapper] Test setup, not cleaning
[2025-10-13 01:51:25] 2025-10-12 23:46:14,140 [wrapper] apfmon messages muted
[2025-10-13 01:51:25] 2025-10-12 23:46:14,144 [wrapper] ==== wrapper stdout END ====
[2025-10-13 01:51:25] 2025-10-12 23:46:14,147 [wrapper] ==== wrapper stderr END ====
[2025-10-13 01:51:25]  *** Error codes and diagnostics ***
[2025-10-13 01:51:25]     "exeErrorCode": 0,
[2025-10-13 01:51:25]     "exeErrorDiag": "",
[2025-10-13 01:51:25]     "pilotErrorCode": 0,
[2025-10-13 01:51:25]     "pilotErrorDiag": "",
[2025-10-13 01:51:25]  *** Listing of results directory ***
[2025-10-13 01:51:25] total 410916
[2025-10-13 01:51:25] -rw-r--r-- 1 boinc boinc    557409 Oct 11 05:42 pilot3.tar.gz
[2025-10-13 01:51:25] -rw-r--r-- 1 boinc boinc      5112 Oct 11 06:12 queuedata.json
[2025-10-13 01:51:25] -rwx------ 1 boinc boinc     36292 Oct 11 06:12 runpilot2-wrapper.sh
[2025-10-13 01:51:25] -rw-r--r-- 1 boinc boinc       100 Oct 12 23:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 01:51:25] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 23:07 run_atlas
[2025-10-13 01:51:25] -rw-r--r-- 1 boinc boinc       105 Oct 12 23:07 job.xml
[2025-10-13 01:51:25] -rw-r--r-- 2 boinc boinc 219869483 Oct 12 23:07 EVNT.46676267._002042.pool.root.1
[2025-10-13 01:51:25] -rw-r--r-- 1 boinc boinc      6688 Oct 12 23:07 init_data.xml
[2025-10-13 01:51:25] -rw-r--r-- 2 boinc boinc     15120 Oct 12 23:07 start_atlas.sh
[2025-10-13 01:51:25] drwxrwx--x 2 boinc boinc      4096 Oct 12 23:07 shared
[2025-10-13 01:51:25] -rw-r--r-- 2 boinc boinc    569679 Oct 12 23:07 input.tar.gz
[2025-10-13 01:51:25] -rw-r--r-- 1 boinc boinc         0 Oct 12 23:07 boinc_lockfile
[2025-10-13 01:51:25] -rw-r--r-- 1 boinc boinc      2550 Oct 12 23:07 pandaJob.out
[2025-10-13 01:51:25] -rw------- 1 boinc boinc    975536 Oct 12 23:07 agis_schedconf.cvmfs.json
[2025-10-13 01:51:25] -rw------- 1 boinc boinc   1560580 Oct 12 23:07 agis_ddmendpoints.agis.ALL.json
[2025-10-13 01:51:25] drwx------ 5 boinc boinc      4096 Oct 12 23:07 pilot3
[2025-10-13 01:51:25] -rw------- 1 boinc boinc 193661527 Oct 13 01:44 HITS.46676269._050750.pool.root.1
[2025-10-13 01:51:25] -rw-r--r-- 1 boinc boinc       529 Oct 13 01:45 boinc_task_state.xml
[2025-10-13 01:51:25] -rw------- 1 boinc boinc        95 Oct 13 01:45 pilot_heartbeat.json
[2025-10-13 01:51:25] -rw------- 1 boinc boinc      1038 Oct 13 01:45 memory_monitor_summary.json
[2025-10-13 01:51:25] -rw------- 1 boinc boinc    334236 Oct 13 01:45 log.46676269._050750.job.log.tgz.1
[2025-10-13 01:51:25] -rw------- 1 boinc boinc      7776 Oct 13 01:45 heartbeat.json
[2025-10-13 01:51:25] -rw------- 1 boinc boinc      4906 Oct 13 01:46 pilotlog.txt
[2025-10-13 01:51:25] -rw------- 1 boinc boinc   1333844 Oct 13 01:46 log.46676269._050750.job.log.1
[2025-10-13 01:51:25] -rw------- 1 boinc boinc       357 Oct 13 01:46 output.list
[2025-10-13 01:51:25] -rw-r--r-- 1 boinc boinc       620 Oct 13 01:46 runtime_log
[2025-10-13 01:51:25] -rw------- 1 boinc boinc   1689600 Oct 13 01:46 result.tar.gz
[2025-10-13 01:51:25] -rw-r--r-- 1 boinc boinc      9084 Oct 13 01:46 runtime_log.err
[2025-10-13 01:51:25] -rw------- 1 boinc boinc       662 Oct 13 01:46 9kfMDm48fR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm0ARMDm5XxM2m.diag
[2025-10-13 01:51:25] -rw-r--r-- 1 boinc boinc        26 Oct 13 01:51 wrapper_checkpoint.txt
[2025-10-13 01:51:25] -rw-r--r-- 1 boinc boinc      8192 Oct 13 01:51 boinc_mmap_file
[2025-10-13 01:51:25] -rw-r--r-- 1 boinc boinc     20640 Oct 13 01:51 stderr.txt
[2025-10-13 01:51:25] HITS file was successfully produced:
[2025-10-13 01:51:25] -rw------- 1 boinc boinc 193661527 Oct 13 01:44 shared/HITS.pool.root.1
[2025-10-13 01:51:25]  *** Contents of shared directory: ***
[2025-10-13 01:51:25] total 406080
[2025-10-13 01:51:25] -rw-r--r-- 2 boinc boinc 219869483 Oct 12 23:07 ATLAS.root_0
[2025-10-13 01:51:25] -rw-r--r-- 2 boinc boinc     15120 Oct 12 23:07 start_atlas.sh
[2025-10-13 01:51:25] -rw-r--r-- 2 boinc boinc    569679 Oct 12 23:07 input.tar.gz
[2025-10-13 01:51:25] -rw------- 1 boinc boinc 193661527 Oct 13 01:44 HITS.pool.root.1
[2025-10-13 01:51:25] -rw------- 1 boinc boinc   1689600 Oct 13 01:46 result.tar.gz
01:51:26 (422553): run_atlas exited; CPU time 36865.410136
01:51:26 (422553): called boinc_finish(0)

</stderr_txt>
]]>

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