Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
09:53:19 (3082264): wrapper (7.7.26015): starting
09:53:19 (3082264): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 09:53:19] Arguments: --nthreads 12
[2025-10-11 09:53:19] Threads: 12
[2025-10-11 09:53:19] Checking for CVMFS
[2025-10-11 09:53:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 09:53:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 09:53:20] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 09:53:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 09:53:20] 2.11.0.0 3299214 1467 85192 151579 2 188 5085813 6144001 14272 130560 0 28835069 100.000 53820 207 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-11 09:53:20] CVMFS is ok
[2025-10-11 09:53:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 09:53:20] Checking for apptainer binary...
[2025-10-11 09:53:20] apptainer is not installed, using version from CVMFS
[2025-10-11 09:53:20] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 09:53:20] radiat0r
[2025-10-11 09:53:20] apptainer works
[2025-10-11 09:53:20] Set ATHENA_PROC_NUMBER=12
[2025-10-11 09:53:20] Set ATHENA_CORE_NUMBER=12
[2025-10-11 09:53:20] Starting ATLAS job with PandaID=6837875568
[2025-10-11 09:53:20] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/22 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 10:44:55]  *** The last 200 lines of the pilot log: ***
[2025-10-11 10:44:55]  workdir=None
[2025-10-11 10:44:55] ]
[2025-10-11 10:44:55] 2025-10-11 10:44:10,580 | INFO     | transferring file log.46676269._047522.job.log.tgz.1 from /var/lib/boinc/slots/22/PanDA_Pilot-6837875568/log.46676269._047522.job.log.tgz.1 to /var/lib/boinc/slots
[2025-10-11 10:44:55] 2025-10-11 10:44:10,581 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/22/PanDA_Pilot-6837875568/log.46676269._047522.job.log.tgz.1 /var/lib/boinc/slots/22/log.46676269._047522.j
[2025-10-11 10:44:55] 2025-10-11 10:44:10,610 | INFO     | adding to output.list: log.46676269._047522.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d4/a2/log.46676269._047522.job.log.tg
[2025-10-11 10:44:55] 2025-10-11 10:44:10,611 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 10:44:55] 2025-10-11 10:44:10,611 | INFO     | summary of transferred files:
[2025-10-11 10:44:55] 2025-10-11 10:44:10,611 | INFO     |  -- lfn=log.46676269._047522.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 10:44:55] 2025-10-11 10:44:10,611 | INFO     | stage-out finished correctly
[2025-10-11 10:44:55] 2025-10-11 10:44:10,704 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 10:44:55] 2025-10-11 10:44:10,861 | INFO     | monitor loop #212: job 0:6837875568 is in state 'finished'
[2025-10-11 10:44:55] 2025-10-11 10:44:10,862 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 10:44:55] 2025-10-11 10:44:11,426 | INFO     | PID=3087427 has CPU usage=24.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-11 10:44:55] 2025-10-11 10:44:11,426 | INFO     | .. there are 17 such processes running
[2025-10-11 10:44:55] 2025-10-11 10:44:12,028 | INFO     | job 6837875568 has state=finished
[2025-10-11 10:44:55] 2025-10-11 10:44:12,029 | INFO     | preparing for final server update for job 6837875568 in state='finished'
[2025-10-11 10:44:55] 2025-10-11 10:44:12,029 | INFO     | this job has now completed (state=finished)
[2025-10-11 10:44:55] 2025-10-11 10:44:12,029 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 10:44:55] 2025-10-11 10:44:12,029 | INFO     | log transfer has been attempted: DONE
[2025-10-11 10:44:55] 2025-10-11 10:44:12,030 | INFO     | job 6837875568 has finished - writing final server update
[2025-10-11 10:44:55] 2025-10-11 10:44:12,030 | INFO     | total number of processed events: 400 (read)
[2025-10-11 10:44:55] 2025-10-11 10:44:12,032 | INFO     | executing command: lscpu
[2025-10-11 10:44:55] 2025-10-11 10:44:12,235 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 10:44:55] 2025-10-11 10:44:12,427 | INFO     | time since job start (3035s) is within the limit (172800.0s)
[2025-10-11 10:44:55] 2025-10-11 10:44:13,365 | INFO     | monitor loop #213: job 0:6837875568 is in state 'finished'
[2025-10-11 10:44:55] 2025-10-11 10:44:13,365 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 10:44:55] 2025-10-11 10:44:14,432 | INFO     | time since job start (3037s) is within the limit (172800.0s)
[2025-10-11 10:44:55] 2025-10-11 10:44:15,866 | INFO     | monitor loop #214: job 0:6837875568 is in state 'finished'
[2025-10-11 10:44:55] 2025-10-11 10:44:15,866 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 10:44:55] 2025-10-11 10:44:16,435 | INFO     | time since job start (3039s) is within the limit (172800.0s)
[2025-10-11 10:44:55] 2025-10-11 10:44:18,370 | INFO     | monitor loop #215: job 0:6837875568 is in state 'finished'
[2025-10-11 10:44:55] 2025-10-11 10:44:18,370 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 10:44:55] 2025-10-11 10:44:18,439 | INFO     | time since job start (3041s) is within the limit (172800.0s)
[2025-10-11 10:44:55] 2025-10-11 10:44:20,254 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 10:44:55] 2025-10-11 10:44:20,319 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 2416.229468750001
[2025-10-11 10:44:55] 2025-10-11 10:44:20,373 | INFO     | using path: /var/lib/boinc/slots/22/PanDA_Pilot-6837875568/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 10:44:55] 2025-10-11 10:44:20,374 | INFO     | extracted standard info from prmon json
[2025-10-11 10:44:55] 2025-10-11 10:44:20,374 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 10:44:55] 2025-10-11 10:44:20,374 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 10:44:55] 2025-10-11 10:44:20,375 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 10:44:55] 2025-10-11 10:44:20,375 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 10:44:55] 2025-10-11 10:44:20,376 | INFO     | fitting pss+swap vs Time
[2025-10-11 10:44:55] 2025-10-11 10:44:20,376 | INFO     | sum of square deviations: 24640462.0
[2025-10-11 10:44:55] 2025-10-11 10:44:20,377 | INFO     | sum of deviations: 382150482.0
[2025-10-11 10:44:55] 2025-10-11 10:44:20,377 | INFO     | mean x: 1760178037.0
[2025-10-11 10:44:55] 2025-10-11 10:44:20,377 | INFO     | mean y: 2658766.976744186
[2025-10-11 10:44:55] 2025-10-11 10:44:20,377 | INFO     | -- intersect: -27296053621.02003
[2025-10-11 10:44:55] 2025-10-11 10:44:20,377 | INFO     | intersect: -27296053621.02003
[2025-10-11 10:44:55] 2025-10-11 10:44:20,377 | INFO     | chi2: 0.00043580913406492605
[2025-10-11 10:44:55] 2025-10-11 10:44:20,377 | INFO     | -- intersect: -27296053621.02003
[2025-10-11 10:44:55] 2025-10-11 10:44:20,378 | INFO     | current memory leak: 15.51 B/s (using 43 data points, chi2=0.00)
[2025-10-11 10:44:55] 2025-10-11 10:44:20,378 | INFO     | could have reported an average CPU frequency of 2394 MHz (5 samples)
[2025-10-11 10:44:55] 2025-10-11 10:44:20,378 | INFO     | ..............................
[2025-10-11 10:44:55] 2025-10-11 10:44:20,378 | INFO     | . Timing measurements:
[2025-10-11 10:44:55] 2025-10-11 10:44:20,378 | INFO     | . get job = 0 s
[2025-10-11 10:44:55] 2025-10-11 10:44:20,378 | INFO     | . initial setup = 3 s
[2025-10-11 10:44:55] 2025-10-11 10:44:20,378 | INFO     | . payload setup = 8 s
[2025-10-11 10:44:55] 2025-10-11 10:44:20,379 | INFO     | . stage-in = 0 s
[2025-10-11 10:44:55] 2025-10-11 10:44:20,379 | INFO     | . payload execution = 3000 s
[2025-10-11 10:44:55] 2025-10-11 10:44:20,379 | INFO     | . stage-out = 1 s
[2025-10-11 10:44:55] 2025-10-11 10:44:20,379 | INFO     | . log creation = 0 s
[2025-10-11 10:44:55] 2025-10-11 10:44:20,379 | INFO     | ..............................
[2025-10-11 10:44:55] 2025-10-11 10:44:20,448 | INFO     | time since job start (3043s) is within the limit (172800.0s)
[2025-10-11 10:44:55] 2025-10-11 10:44:20,481 | INFO     | 
[2025-10-11 10:44:55] 2025-10-11 10:44:20,481 | INFO     | job summary report
[2025-10-11 10:44:55] 2025-10-11 10:44:20,482 | INFO     | --------------------------------------------------
[2025-10-11 10:44:55] 2025-10-11 10:44:20,482 | INFO     | PanDA job id: 6837875568
[2025-10-11 10:44:55] 2025-10-11 10:44:20,482 | INFO     | task id: 46676269
[2025-10-11 10:44:55] 2025-10-11 10:44:20,482 | INFO     | errors: (none)
[2025-10-11 10:44:55] 2025-10-11 10:44:20,482 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 10:44:55] 2025-10-11 10:44:20,482 | INFO     | pilot state: finished 
[2025-10-11 10:44:55] 2025-10-11 10:44:20,482 | INFO     | transexitcode: 0
[2025-10-11 10:44:55] 2025-10-11 10:44:20,482 | INFO     | exeerrorcode: 0
[2025-10-11 10:44:55] 2025-10-11 10:44:20,482 | INFO     | exeerrordiag: 
[2025-10-11 10:44:55] 2025-10-11 10:44:20,482 | INFO     | exitcode: 0
[2025-10-11 10:44:55] 2025-10-11 10:44:20,482 | INFO     | exitmsg: OK
[2025-10-11 10:44:55] 2025-10-11 10:44:20,483 | INFO     | cpuconsumptiontime: 32786 s
[2025-10-11 10:44:55] 2025-10-11 10:44:20,483 | INFO     | nevents: 400
[2025-10-11 10:44:55] 2025-10-11 10:44:20,483 | INFO     | neventsw: 0
[2025-10-11 10:44:55] 2025-10-11 10:44:20,483 | INFO     | pid: 3100390
[2025-10-11 10:44:55] 2025-10-11 10:44:20,483 | INFO     | pgrp: 3100390
[2025-10-11 10:44:55] 2025-10-11 10:44:20,483 | INFO     | corecount: 12
[2025-10-11 10:44:55] 2025-10-11 10:44:20,483 | INFO     | event service: False
[2025-10-11 10:44:55] 2025-10-11 10:44:20,483 | INFO     | sizes: {0: 2348687, 1: 2348886, 8: 2349148, 12: 2349176, 3013: 2374596, 3014: 2374595, 3015: 2383835, 3025: 2384005}
[2025-10-11 10:44:55] 2025-10-11 10:44:20,483 | INFO     | --------------------------------------------------
[2025-10-11 10:44:55] 2025-10-11 10:44:20,483 | INFO     | 
[2025-10-11 10:44:55] 2025-10-11 10:44:20,483 | INFO     | executing command: ls -lF /var/lib/boinc/slots/22
[2025-10-11 10:44:55] 2025-10-11 10:44:20,515 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 10:44:55] 2025-10-11 10:44:20,516 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 10:44:55] 2025-10-11 10:44:20,516 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 10:44:55] 2025-10-11 10:44:20,516 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 10:44:55] 2025-10-11 10:44:20,516 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 10:44:55] 2025-10-11 10:44:20,516 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 10:44:55] 2025-10-11 10:44:20,516 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 10:44:55] 2025-10-11 10:44:20,517 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 10:44:55] 2025-10-11 10:44:20,517 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 10:44:55] 2025-10-11 10:44:20,517 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 10:44:55] 2025-10-11 10:44:20,517 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 10:44:55] 2025-10-11 10:44:20,517 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 10:44:55] 2025-10-11 10:44:20,517 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 10:44:55] 2025-10-11 10:44:20,517 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 10:44:55] 2025-10-11 10:44:20,517 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 10:44:55] 2025-10-11 10:44:20,517 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 10:44:55] 2025-10-11 10:44:20,517 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 10:44:55] 2025-10-11 10:44:20,518 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 10:44:55] 2025-10-11 10:44:20,518 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 10:44:55] 2025-10-11 10:44:20,518 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 10:44:55] 2025-10-11 10:44:20,518 | INFO     | job 6837875568 has completed (purged errors)
[2025-10-11 10:44:55] 2025-10-11 10:44:20,518 | INFO     | overall cleanup function is called
[2025-10-11 10:44:55] 2025-10-11 10:44:21,528 | INFO     | --- collectZombieJob: --- 10, [3100390]
[2025-10-11 10:44:55] 2025-10-11 10:44:21,529 | INFO     | zombie collector waiting for pid 3100390
[2025-10-11 10:44:55] 2025-10-11 10:44:21,529 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 10:44:55] 2025-10-11 10:44:21,529 | INFO     | collected zombie processes
[2025-10-11 10:44:55] 2025-10-11 10:44:21,529 | INFO     | will attempt to kill all subprocesses of pid=3100390
[2025-10-11 10:44:55] 2025-10-11 10:44:22,400 | INFO     | process IDs to be killed: [3100390] (in reverse order)
[2025-10-11 10:44:55] 2025-10-11 10:44:22,689 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 10:44:55] 2025-10-11 10:44:22,690 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 10:44:55] 2025-10-11 10:44:22,718 | INFO     | did not find any defunct processes belonging to 3100390
[2025-10-11 10:44:55] 2025-10-11 10:44:22,743 | INFO     | did not find any defunct processes belonging to 3100390
[2025-10-11 10:44:55] 2025-10-11 10:44:22,743 | INFO     | ready for new job
[2025-10-11 10:44:55] 2025-10-11 10:44:22,743 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 10:44:55] 2025-10-11 10:44:22,746 | INFO     | ***************************************
[2025-10-11 10:44:55] 2025-10-11 10:44:22,746 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 10:44:55] 2025-10-11 10:44:22,746 | INFO     | ***************************************
[2025-10-11 10:44:55] 2025-10-11 10:44:22,746 | INFO     | 
[2025-10-11 10:44:55] 2025-10-11 10:44:22,789 | INFO     | architecture information:
[2025-10-11 10:44:55] 2025-10-11 10:44:22,790 | INFO     | executing command: cat /etc/os-release
[2025-10-11 10:44:55] 2025-10-11 10:44:22,815 | INFO     | cat /etc/os-release:
[2025-10-11 10:44:55] NAME="CentOS Linux"
[2025-10-11 10:44:55] VERSION="7 (Core)"
[2025-10-11 10:44:55] ID="centos"
[2025-10-11 10:44:55] ID_LIKE="rhel fedora"
[2025-10-11 10:44:55] VERSION_ID="7"
[2025-10-11 10:44:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 10:44:55] ANSI_COLOR="0;31"
[2025-10-11 10:44:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 10:44:55] HOME_URL="https://www.centos.org/"
[2025-10-11 10:44:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 10:44:55] 
[2025-10-11 10:44:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 10:44:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 10:44:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 10:44:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 10:44:55] 
[2025-10-11 10:44:55] 2025-10-11 10:44:22,816 | INFO     | ***************************************
[2025-10-11 10:44:55] 2025-10-11 10:44:23,323 | INFO     | executing command: df -mP /var/lib/boinc/slots/22
[2025-10-11 10:44:55] 2025-10-11 10:44:23,353 | INFO     | sufficient remaining disk space (1725639426048 B)
[2025-10-11 10:44:55] 2025-10-11 10:44:23,353 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 10:44:55] 2025-10-11 10:44:23,353 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 10:44:55] 2025-10-11 10:44:23,353 | INFO     | update_server=False
[2025-10-11 10:44:55] 2025-10-11 10:44:23,354 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 10:44:55] 2025-10-11 10:44:23,370 | INFO     | all job control threads have been joined
[2025-10-11 10:44:55] 2025-10-11 10:44:23,381 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 10:44:55] 2025-10-11 10:44:23,381 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 10:44:55] 2025-10-11 10:44:23,381 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 10:44:55] 2025-10-11 10:44:23,382 | INFO     | will abort loop
[2025-10-11 10:44:55] 2025-10-11 10:44:23,560 | INFO     | all data control threads have been joined
[2025-10-11 10:44:55] 2025-10-11 10:44:23,720 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 10:44:55] 2025-10-11 10:44:23,761 | INFO     | all payload control threads have been joined
[2025-10-11 10:44:55] 2025-10-11 10:44:24,359 | INFO     | [job] retrieve thread has finished
[2025-10-11 10:44:55] 2025-10-11 10:44:24,376 | INFO     | [job] control thread has finished
[2025-10-11 10:44:55] 2025-10-11 10:44:24,387 | INFO     | [job] job monitor thread has finished
[2025-10-11 10:44:55] 2025-10-11 10:44:24,524 | INFO     | [job] validate thread has finished
[2025-10-11 10:44:55] 2025-10-11 10:44:24,531 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 10:44:55] 2025-10-11 10:44:24,566 | INFO     | [data] control thread has finished
[2025-10-11 10:44:55] 2025-10-11 10:44:24,630 | INFO     | [data] copytool_in thread has finished
[2025-10-11 10:44:55] 2025-10-11 10:44:24,692 | INFO     | [payload] validate_post thread has finished
[2025-10-11 10:44:55] 2025-10-11 10:44:24,766 | INFO     | [payload] control thread has finished
[2025-10-11 10:44:55] 2025-10-11 10:44:24,827 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 10:44:55] 2025-10-11 10:44:24,846 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 10:44:55] 2025-10-11 10:44:25,162 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 10:44:55] 2025-10-11 10:44:25,492 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 10:44:55] 2025-10-11 10:44:25,724 | INFO     | [data] copytool_out thread has finished
[2025-10-11 10:44:55] 2025-10-11 10:44:25,816 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 10:44:55] 2025-10-11 10:44:25,822 | INFO     | [payload] failed_post thread has finished
[2025-10-11 10:44:55] 2025-10-11 10:44:26,498 | INFO     | [job] queue monitor thread has finished
[2025-10-11 10:44:55] 2025-10-11 10:44:29,818 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 10:44:55] 2025-10-11 10:44:41,731 | INFO     | [monitor] cgroup control has ended
[2025-10-11 10:44:55] 2025-10-11 10:44:42,827 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139662569281344)>', '<ExcThread(monitor, started 139661859088128)>']
[2025-10-11 10:44:55] 2025-10-11 10:44:47,850 | INFO     | all workflow threads have been joined
[2025-10-11 10:44:55] 2025-10-11 10:44:47,851 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 10:44:55] 2025-10-11 10:44:47,851 | INFO     | traces error code: 0
[2025-10-11 10:44:55] 2025-10-11 10:44:47,852 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 10:44:55] 2025-10-11 10:44:54,605 | INFO     | PID=3087427 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 10:44:55] 2025-10-11 10:44:54,606 | INFO     | .. there are 17 such processes running
[2025-10-11 10:44:55] 2025-10-11 10:44:54,606 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 10:44:55] 2025-10-11 10:44:54,606 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 10:44:55] 2025-10-11 10:44:54,606 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 10:44:55] 2025-10-11 10:44:54,606 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 10:44:55] 2025-10-11 10:44:54,607 | INFO     | [monitor] control thread has ended
[2025-10-11 10:44:55] 2025-10-11 10:44:54,785 [wrapper] ==== pilot stdout END ====
[2025-10-11 10:44:55] 2025-10-11 10:44:54,789 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 10:44:55] 2025-10-11 10:44:54,792 [wrapper] pilotpid: 3087427
[2025-10-11 10:44:55] 2025-10-11 10:44:54,795 [wrapper] Pilot exit status: 0
[2025-10-11 10:44:55] 2025-10-11 10:44:54,809 [wrapper] pandaids: 6837875568
[2025-10-11 10:44:55] 2025-10-11 10:44:54,991 [wrapper] cleanup supervisor_pilot 3524156 3087428
[2025-10-11 10:44:55] 2025-10-11 10:44:54,996 [wrapper] Test setup, not cleaning
[2025-10-11 10:44:55] 2025-10-11 10:44:55,000 [wrapper] apfmon messages muted
[2025-10-11 10:44:55] 2025-10-11 10:44:55,004 [wrapper] ==== wrapper stdout END ====
[2025-10-11 10:44:55] 2025-10-11 10:44:55,008 [wrapper] ==== wrapper stderr END ====
[2025-10-11 10:44:55]  *** Error codes and diagnostics ***
[2025-10-11 10:44:55]     "exeErrorCode": 0,
[2025-10-11 10:44:55]     "exeErrorDiag": "",
[2025-10-11 10:44:55]     "pilotErrorCode": 0,
[2025-10-11 10:44:55]     "pilotErrorDiag": "",
[2025-10-11 10:44:55]  *** Listing of results directory ***
[2025-10-11 10:44:55] total 415496
[2025-10-11 10:44:55] -rw-r--r-- 1 boinc boinc    557409 Oct 11 00:00 pilot3.tar.gz
[2025-10-11 10:44:55] -rw-r--r-- 1 boinc boinc      5112 Oct 11 00:13 queuedata.json
[2025-10-11 10:44:55] -rwx------ 1 boinc boinc     36292 Oct 11 00:14 runpilot2-wrapper.sh
[2025-10-11 10:44:55] -rw-r--r-- 1 boinc boinc       100 Oct 11 09:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 10:44:55] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 09:53 run_atlas
[2025-10-11 10:44:55] -rw-r--r-- 1 boinc boinc       105 Oct 11 09:53 job.xml
[2025-10-11 10:44:55] -rw-r--r-- 2 boinc boinc     15120 Oct 11 09:53 start_atlas.sh
[2025-10-11 10:44:55] drwxrwx--x 2 boinc boinc      4096 Oct 11 09:53 shared
[2025-10-11 10:44:55] -rw-r--r-- 2 boinc boinc    569679 Oct 11 09:53 input.tar.gz
[2025-10-11 10:44:55] -rw-r--r-- 2 boinc boinc 220723472 Oct 11 09:53 EVNT.46676267._001919.pool.root.1
[2025-10-11 10:44:55] -rw-r--r-- 1 boinc boinc         0 Oct 11 09:53 boinc_setup_complete
[2025-10-11 10:44:55] -rw-r--r-- 1 boinc boinc      9396 Oct 11 09:53 init_data.xml
[2025-10-11 10:44:55] -rw-r--r-- 1 boinc boinc         0 Oct 11 09:53 boinc_lockfile
[2025-10-11 10:44:55] -rw-r--r-- 1 boinc boinc      2550 Oct 11 09:53 pandaJob.out
[2025-10-11 10:44:55] -rw------- 1 boinc boinc    975525 Oct 11 09:53 agis_schedconf.cvmfs.json
[2025-10-11 10:44:55] -rw------- 1 boinc boinc   1560580 Oct 11 09:53 agis_ddmendpoints.agis.ALL.json
[2025-10-11 10:44:55] drwx------ 5 boinc boinc      4096 Oct 11 09:53 pilot3
[2025-10-11 10:44:55] -rw------- 1 boinc boinc 199215691 Oct 11 10:43 HITS.46676269._047522.pool.root.1
[2025-10-11 10:44:55] -rw-r--r-- 1 boinc boinc       530 Oct 11 10:43 boinc_task_state.xml
[2025-10-11 10:44:55] -rw------- 1 boinc boinc      1025 Oct 11 10:44 memory_monitor_summary.json
[2025-10-11 10:44:55] -rw------- 1 boinc boinc    359739 Oct 11 10:44 log.46676269._047522.job.log.tgz.1
[2025-10-11 10:44:55] -rw------- 1 boinc boinc      7742 Oct 11 10:44 heartbeat.json
[2025-10-11 10:44:55] -rw------- 1 boinc boinc        95 Oct 11 10:44 pilot_heartbeat.json
[2025-10-11 10:44:55] -rw-r--r-- 1 boinc boinc        27 Oct 11 10:44 wrapper_checkpoint.txt
[2025-10-11 10:44:55] -rw-r--r-- 1 boinc boinc      8192 Oct 11 10:44 boinc_mmap_file
[2025-10-11 10:44:55] -rw------- 1 boinc boinc       823 Oct 11 10:44 pilotlog.txt
[2025-10-11 10:44:55] -rw------- 1 boinc boinc    454391 Oct 11 10:44 log.46676269._047522.job.log.1
[2025-10-11 10:44:55] -rw------- 1 boinc boinc       357 Oct 11 10:44 output.list
[2025-10-11 10:44:55] -rw-r--r-- 1 boinc boinc       620 Oct 11 10:44 runtime_log
[2025-10-11 10:44:55] -rw------- 1 boinc boinc    829440 Oct 11 10:44 result.tar.gz
[2025-10-11 10:44:55] -rw-r--r-- 1 boinc boinc      8672 Oct 11 10:44 runtime_log.err
[2025-10-11 10:44:55] -rw------- 1 boinc boinc       643 Oct 11 10:44 KZ9LDmwQcR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6peNDmgc08pm.diag
[2025-10-11 10:44:55] -rw-r--r-- 1 boinc boinc     22066 Oct 11 10:44 stderr.txt
[2025-10-11 10:44:55] HITS file was successfully produced:
[2025-10-11 10:44:55] -rw------- 1 boinc boinc 199215691 Oct 11 10:43 shared/HITS.pool.root.1
[2025-10-11 10:44:55]  *** Contents of shared directory: ***
[2025-10-11 10:44:55] total 411496
[2025-10-11 10:44:55] -rw-r--r-- 2 boinc boinc     15120 Oct 11 09:53 start_atlas.sh
[2025-10-11 10:44:55] -rw-r--r-- 2 boinc boinc    569679 Oct 11 09:53 input.tar.gz
[2025-10-11 10:44:55] -rw-r--r-- 2 boinc boinc 220723472 Oct 11 09:53 ATLAS.root_0
[2025-10-11 10:44:55] -rw------- 1 boinc boinc 199215691 Oct 11 10:43 HITS.pool.root.1
[2025-10-11 10:44:55] -rw------- 1 boinc boinc    829440 Oct 11 10:44 result.tar.gz
10:44:56 (3082264): run_atlas exited; CPU time 32971.587114
10:44:56 (3082264): called boinc_finish(0)

</stderr_txt>
]]>

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