Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:22:21 (711178): wrapper (7.7.26015): starting
10:22:21 (711178): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 10:22:21] Arguments: --nthreads 4
[2025-10-12 10:22:21] Threads: 4
[2025-10-12 10:22:21] Checking for CVMFS
[2025-10-12 10:22:21] No cvmfs_config command found, will try listing directly
[2025-10-12 10:22:21] CVMFS is ok
[2025-10-12 10:22:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 10:22:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 10:22:21] Further information can be found at the LHC@home message board.
[2025-10-12 10:22:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 10:22:21] Checking for apptainer binary...
[2025-10-12 10:22:21] which: no apptainer in ((null))
[2025-10-12 10:22:21] apptainer is not installed, using version from CVMFS
[2025-10-12 10:22:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 10:22:21] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot88/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-10-12 10:22:21] apptainer works
[2025-10-12 10:22:21] Set ATHENA_PROC_NUMBER=4
[2025-10-12 10:22:21] Set ATHENA_CORE_NUMBER=4
[2025-10-12 10:22:21] Starting ATLAS job with PandaID=6838067303
[2025-10-12 10:22:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot88/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 13:11:14]  *** The last 200 lines of the pilot log: ***
[2025-10-12 13:11:14] 2025-10-12 11:06:53,769 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 13:11:14] 2025-10-12 11:06:53,788 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2752.6231249999996
[2025-10-12 13:11:14] 2025-10-12 11:06:53,811 | INFO     | using path: /scratch/boinc/var/slot88/slots/0/PanDA_Pilot-6838067303/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 13:11:14] 2025-10-12 11:06:53,812 | INFO     | extracted standard info from prmon json
[2025-10-12 13:11:14] 2025-10-12 11:06:53,812 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 13:11:14] 2025-10-12 11:06:53,812 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 13:11:14] 2025-10-12 11:06:53,812 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 13:11:14] 2025-10-12 11:06:53,812 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 13:11:14] 2025-10-12 11:06:53,815 | INFO     | fitting pss+swap vs Time
[2025-10-12 13:11:14] 2025-10-12 11:06:53,816 | INFO     | sum of square deviations: 1294014960.0
[2025-10-12 13:11:14] 2025-10-12 11:06:53,816 | INFO     | sum of deviations: -6574977597.999997
[2025-10-12 13:11:14] 2025-10-12 11:06:53,817 | INFO     | mean x: 1760262272.0
[2025-10-12 13:11:14] 2025-10-12 11:06:53,817 | INFO     | mean y: 2368633.3788819876
[2025-10-12 13:11:14] 2025-10-12 11:06:53,817 | INFO     | -- intersect: 8946380381.901926
[2025-10-12 13:11:14] 2025-10-12 11:06:53,817 | INFO     | intersect: 8946380381.901926
[2025-10-12 13:11:14] 2025-10-12 11:06:53,817 | INFO     | chi2: 1.4136846333359319
[2025-10-12 13:11:14] 2025-10-12 11:06:53,817 | INFO     | sum of square deviations: 1177156955.0
[2025-10-12 13:11:14] 2025-10-12 11:06:53,818 | INFO     | sum of deviations: -6030130203.500002
[2025-10-12 13:11:14] 2025-10-12 11:06:53,818 | INFO     | mean x: 1760262119.5
[2025-10-12 13:11:14] 2025-10-12 11:06:53,818 | INFO     | mean y: 2369344.044871795
[2025-10-12 13:11:14] 2025-10-12 11:06:53,818 | INFO     | -- intersect: 9019526935.29733
[2025-10-12 13:11:14] 2025-10-12 11:06:53,819 | INFO     | intersect: 9019526935.29733
[2025-10-12 13:11:14] 2025-10-12 11:06:53,819 | INFO     | chi2: 1.4135327821967847
[2025-10-12 13:11:14] 2025-10-12 11:06:53,819 | INFO     | current chi2=1.4135327821967847 (change=0.010741514448582836 %)
[2025-10-12 13:11:14] 2025-10-12 11:06:53,819 | INFO     | right removable region: 155
[2025-10-12 13:11:14] 2025-10-12 11:06:53,819 | INFO     | sum of square deviations: 1177156955.0
[2025-10-12 13:11:14] 2025-10-12 11:06:53,820 | INFO     | sum of deviations: -25984153713.00001
[2025-10-12 13:11:14] 2025-10-12 11:06:53,820 | INFO     | mean x: 1760262424.5
[2025-10-12 13:11:14] 2025-10-12 11:06:53,820 | INFO     | mean y: 2393515.6666666665
[2025-10-12 13:11:14] 2025-10-12 11:06:53,820 | INFO     | -- intersect: 38857814807.74583
[2025-10-12 13:11:14] 2025-10-12 11:06:53,820 | INFO     | intersect: 38857814807.74583
[2025-10-12 13:11:14] 2025-10-12 11:06:53,821 | INFO     | chi2: 0.09154125848736426
[2025-10-12 13:11:14] 2025-10-12 11:06:53,821 | INFO     | current chi2=0.09154125848736426 (change=93.52463368924437 %)
[2025-10-12 13:11:14] 2025-10-12 11:06:53,821 | INFO     | sum of square deviations: 1067554900.0
[2025-10-12 13:11:14] 2025-10-12 11:06:53,822 | INFO     | sum of deviations: -24384843573.999996
[2025-10-12 13:11:14] 2025-10-12 11:06:53,822 | INFO     | mean x: 1760262577.0
[2025-10-12 13:11:14] 2025-10-12 11:06:53,822 | INFO     | mean y: 2391259.8741721855
[2025-10-12 13:11:14] 2025-10-12 11:06:53,822 | INFO     | -- intersect: 40209904324.83328
[2025-10-12 13:11:14] 2025-10-12 11:06:53,822 | INFO     | intersect: 40209904324.83328
[2025-10-12 13:11:14] 2025-10-12 11:06:53,822 | INFO     | chi2: 0.0872302752679196
[2025-10-12 13:11:14] 2025-10-12 11:06:53,822 | INFO     | current chi2=0.0872302752679196 (change=4.709333573385076 %)
[2025-10-12 13:11:14] 2025-10-12 11:06:53,822 | INFO     | left removable region: 20
[2025-10-12 13:11:14] 2025-10-12 11:06:53,823 | INFO     | sum of square deviations: 762879420.0
[2025-10-12 13:11:14] 2025-10-12 11:06:53,823 | INFO     | sum of deviations: -17559366059.999996
[2025-10-12 13:11:14] 2025-10-12 11:06:53,823 | INFO     | mean x: 1760262699.0
[2025-10-12 13:11:14] 2025-10-12 11:06:53,823 | INFO     | mean y: 2383728.8
[2025-10-12 13:11:14] 2025-10-12 11:06:53,824 | INFO     | -- intersect: 40518743566.51144
[2025-10-12 13:11:14] 2025-10-12 11:06:53,824 | INFO     | intersect: 40518743566.51144
[2025-10-12 13:11:14] 2025-10-12 11:06:53,824 | INFO     | chi2: 0.08182617903298257
[2025-10-12 13:11:14] 2025-10-12 11:06:53,824 | INFO     | -- intersect: 40518743566.51144
[2025-10-12 13:11:14] 2025-10-12 11:06:53,824 | INFO     | current memory leak: -23.02 B/s (using 135 data points, chi2=0.08)
[2025-10-12 13:11:14] 2025-10-12 11:06:53,824 | INFO     | could have reported an average CPU frequency of 2732 MHz (9 samples)
[2025-10-12 13:11:14] 2025-10-12 11:06:53,825 | INFO     | ..............................
[2025-10-12 13:11:14] 2025-10-12 11:06:53,825 | INFO     | . Timing measurements:
[2025-10-12 13:11:14] 2025-10-12 11:06:53,825 | INFO     | . get job = 0 s
[2025-10-12 13:11:14] 2025-10-12 11:06:53,825 | INFO     | . initial setup = 1 s
[2025-10-12 13:11:14] 2025-10-12 11:06:53,825 | INFO     | . payload setup = 9 s
[2025-10-12 13:11:14] 2025-10-12 11:06:53,825 | INFO     | . stage-in = 0 s
[2025-10-12 13:11:14] 2025-10-12 11:06:53,825 | INFO     | . payload execution = 9813 s
[2025-10-12 13:11:14] 2025-10-12 11:06:53,825 | INFO     | . stage-out = 0 s
[2025-10-12 13:11:14] 2025-10-12 11:06:53,825 | INFO     | . log creation = 0 s
[2025-10-12 13:11:14] 2025-10-12 11:06:53,825 | INFO     | ..............................
[2025-10-12 13:11:14] 2025-10-12 11:06:53,919 | INFO     | 
[2025-10-12 13:11:14] 2025-10-12 11:06:53,919 | INFO     | job summary report
[2025-10-12 13:11:14] 2025-10-12 11:06:53,919 | INFO     | --------------------------------------------------
[2025-10-12 13:11:14] 2025-10-12 11:06:53,919 | INFO     | PanDA job id: 6838067303
[2025-10-12 13:11:14] 2025-10-12 11:06:53,919 | INFO     | task id: 46676269
[2025-10-12 13:11:14] 2025-10-12 11:06:53,920 | INFO     | errors: (none)
[2025-10-12 13:11:14] 2025-10-12 11:06:53,920 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 13:11:14] 2025-10-12 11:06:53,920 | INFO     | pilot state: finished 
[2025-10-12 13:11:14] 2025-10-12 11:06:53,920 | INFO     | transexitcode: 0
[2025-10-12 13:11:14] 2025-10-12 11:06:53,920 | INFO     | exeerrorcode: 0
[2025-10-12 13:11:14] 2025-10-12 11:06:53,920 | INFO     | exeerrordiag: 
[2025-10-12 13:11:14] 2025-10-12 11:06:53,920 | INFO     | exitcode: 0
[2025-10-12 13:11:14] 2025-10-12 11:06:53,920 | INFO     | exitmsg: OK
[2025-10-12 13:11:14] 2025-10-12 11:06:53,920 | INFO     | cpuconsumptiontime: 37998 s
[2025-10-12 13:11:14] 2025-10-12 11:06:53,920 | INFO     | nevents: 400
[2025-10-12 13:11:14] 2025-10-12 11:06:53,921 | INFO     | neventsw: 0
[2025-10-12 13:11:14] 2025-10-12 11:06:53,921 | INFO     | pid: 732592
[2025-10-12 13:11:14] 2025-10-12 11:06:53,921 | INFO     | pgrp: 732592
[2025-10-12 13:11:14] 2025-10-12 11:06:53,921 | INFO     | corecount: 4
[2025-10-12 13:11:14] 2025-10-12 11:06:53,921 | INFO     | event service: False
[2025-10-12 13:11:14] 2025-10-12 11:06:53,921 | INFO     | sizes: {0: 2348867, 7: 2349129, 11: 2349157, 9826: 2378179, 9827: 2378178, 9828: 2387254, 9831: 2387438, 9839: 2387696}
[2025-10-12 13:11:14] 2025-10-12 11:06:53,921 | INFO     | --------------------------------------------------
[2025-10-12 13:11:14] 2025-10-12 11:06:53,921 | INFO     | 
[2025-10-12 13:11:14] 2025-10-12 11:06:53,921 | INFO     | executing command: ls -lF /scratch/boinc/var/slot88/slots/0
[2025-10-12 13:11:14] 2025-10-12 11:06:53,950 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 13:11:14] 2025-10-12 11:06:53,950 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 13:11:14] 2025-10-12 11:06:53,951 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 13:11:14] 2025-10-12 11:06:53,951 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 13:11:14] 2025-10-12 11:06:53,951 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 13:11:14] 2025-10-12 11:06:53,951 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 13:11:14] 2025-10-12 11:06:53,951 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 13:11:14] 2025-10-12 11:06:53,951 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 13:11:14] 2025-10-12 11:06:53,951 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 13:11:14] 2025-10-12 11:06:53,951 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 13:11:14] 2025-10-12 11:06:53,951 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 13:11:14] 2025-10-12 11:06:53,951 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 13:11:14] 2025-10-12 11:06:53,951 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 13:11:14] 2025-10-12 11:06:53,952 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 13:11:14] 2025-10-12 11:06:53,952 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 13:11:14] 2025-10-12 11:06:53,952 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 13:11:14] 2025-10-12 11:06:53,952 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 13:11:14] 2025-10-12 11:06:53,952 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 13:11:14] 2025-10-12 11:06:53,952 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 13:11:14] 2025-10-12 11:06:53,952 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 13:11:14] 2025-10-12 11:06:53,952 | INFO     | job 6838067303 has completed (purged errors)
[2025-10-12 13:11:14] 2025-10-12 11:06:53,952 | INFO     | overall cleanup function is called
[2025-10-12 13:11:14] 2025-10-12 11:06:54,961 | INFO     | --- collectZombieJob: --- 10, [732592]
[2025-10-12 13:11:14] 2025-10-12 11:06:54,961 | INFO     | zombie collector waiting for pid 732592
[2025-10-12 13:11:14] 2025-10-12 11:06:54,961 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 13:11:14] 2025-10-12 11:06:54,961 | INFO     | collected zombie processes
[2025-10-12 13:11:14] 2025-10-12 11:06:54,961 | INFO     | will attempt to kill all subprocesses of pid=732592
[2025-10-12 13:11:14] 2025-10-12 11:06:56,591 | INFO     | PID=717149 has CPU usage=18.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 13:11:14] 2025-10-12 11:06:56,593 | INFO     | .. there are 11 such processes running
[2025-10-12 13:11:14] 2025-10-12 11:06:56,749 | INFO     | process IDs to be killed: [732592] (in reverse order)
[2025-10-12 13:11:14] 2025-10-12 11:06:57,002 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 13:11:14] 2025-10-12 11:06:57,002 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 13:11:14] 2025-10-12 11:06:57,032 | INFO     | did not find any defunct processes belonging to 732592
[2025-10-12 13:11:14] 2025-10-12 11:06:57,062 | INFO     | did not find any defunct processes belonging to 732592
[2025-10-12 13:11:14] 2025-10-12 11:06:57,062 | INFO     | ready for new job
[2025-10-12 13:11:14] 2025-10-12 11:06:57,062 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 13:11:14] 2025-10-12 11:06:57,064 | INFO     | ***************************************
[2025-10-12 13:11:14] 2025-10-12 11:06:57,065 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 13:11:14] 2025-10-12 11:06:57,065 | INFO     | ***************************************
[2025-10-12 13:11:14] 2025-10-12 11:06:57,065 | INFO     | 
[2025-10-12 13:11:14] 2025-10-12 11:06:57,073 | INFO     | architecture information:
[2025-10-12 13:11:14] 2025-10-12 11:06:57,074 | INFO     | executing command: cat /etc/os-release
[2025-10-12 13:11:14] 2025-10-12 11:06:57,095 | INFO     | cat /etc/os-release:
[2025-10-12 13:11:14] NAME="CentOS Linux"
[2025-10-12 13:11:14] VERSION="7 (Core)"
[2025-10-12 13:11:14] ID="centos"
[2025-10-12 13:11:14] ID_LIKE="rhel fedora"
[2025-10-12 13:11:14] VERSION_ID="7"
[2025-10-12 13:11:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 13:11:14] ANSI_COLOR="0;31"
[2025-10-12 13:11:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 13:11:14] HOME_URL="https://www.centos.org/"
[2025-10-12 13:11:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 13:11:14] 
[2025-10-12 13:11:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 13:11:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 13:11:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 13:11:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 13:11:14] 
[2025-10-12 13:11:14] 2025-10-12 11:06:57,096 | INFO     | ***************************************
[2025-10-12 13:11:14] 2025-10-12 11:06:57,599 | INFO     | executing command: df -mP /scratch/boinc/var/slot88/slots/0
[2025-10-12 13:11:14] 2025-10-12 11:06:57,626 | INFO     | sufficient remaining disk space (3339635916800 B)
[2025-10-12 13:11:14] 2025-10-12 11:06:57,626 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 13:11:14] 2025-10-12 11:06:57,627 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 13:11:14] 2025-10-12 11:06:57,627 | INFO     | update_server=False
[2025-10-12 13:11:14] 2025-10-12 11:06:57,627 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 13:11:14] 2025-10-12 11:06:57,875 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:11:14] 2025-10-12 11:06:57,875 | INFO     | aborting loop
[2025-10-12 13:11:14] 2025-10-12 11:06:57,912 | INFO     | all job control threads have been joined
[2025-10-12 13:11:14] 2025-10-12 11:06:57,915 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 13:11:14] 2025-10-12 11:06:58,014 | INFO     | all payload control threads have been joined
[2025-10-12 13:11:14] 2025-10-12 11:06:58,319 | INFO     | all data control threads have been joined
[2025-10-12 13:11:14] 2025-10-12 11:06:58,632 | INFO     | [job] retrieve thread has finished
[2025-10-12 13:11:14] 2025-10-12 11:06:58,771 | INFO     | [data] copytool_in thread has finished
[2025-10-12 13:11:14] 2025-10-12 11:06:58,804 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 13:11:14] 2025-10-12 11:06:58,881 | INFO     | [job] job monitor thread has finished
[2025-10-12 13:11:14] 2025-10-12 11:06:58,918 | INFO     | [job] control thread has finished
[2025-10-12 13:11:14] 2025-10-12 11:06:58,929 | INFO     | [job] validate thread has finished
[2025-10-12 13:11:14] 2025-10-12 11:06:58,930 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:11:14] 2025-10-12 11:06:59,020 | INFO     | [payload] control thread has finished
[2025-10-12 13:11:14] 2025-10-12 11:06:59,323 | INFO     | [data] control thread has finished
[2025-10-12 13:11:14] 2025-10-12 11:06:59,416 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 13:11:14] 2025-10-12 11:06:59,524 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 13:11:14] 2025-10-12 11:06:59,622 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 13:11:14] 2025-10-12 11:06:59,921 | INFO     | [data] copytool_out thread has finished
[2025-10-12 13:11:14] 2025-10-12 11:06:59,926 | INFO     | [payload] failed_post thread has finished
[2025-10-12 13:11:14] 2025-10-12 11:06:59,935 | INFO     | [job] queue monitor thread has finished
[2025-10-12 13:11:14] 2025-10-12 11:07:00,129 | INFO     | [payload] validate_post thread has finished
[2025-10-12 13:11:14] 2025-10-12 11:07:00,755 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 13:11:14] 2025-10-12 11:07:04,761 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 13:11:14] 2025-10-12 11:07:29,612 | INFO     | PID=717149 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 13:11:14] 2025-10-12 11:07:29,612 | INFO     | .. there are 11 such processes running
[2025-10-12 13:11:14] 2025-10-12 11:07:29,613 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 13:11:14] 2025-10-12 11:07:29,613 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 13:11:14] 2025-10-12 11:07:29,613 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 13:11:14] 2025-10-12 11:07:34,066 [wrapper] supervise_pilot (15 min periods counter: 12)
[2025-10-12 13:11:14] 2025-10-12 11:07:51,857 | INFO     | [monitor] cgroup control has ended
[2025-10-12 13:11:14] 2025-10-12 11:07:53,888 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22594330265408)>', '<ExcThread(monitor, started 22594086459136)>']
[2025-10-12 13:11:14] 2025-10-12 11:07:54,717 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 13:11:14] 2025-10-12 11:07:54,717 | INFO     | [monitor] control thread has ended
[2025-10-12 13:11:14] 2025-10-12 11:07:58,913 | INFO     | all workflow threads have been joined
[2025-10-12 13:11:14] 2025-10-12 11:07:58,913 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 13:11:14] 2025-10-12 11:07:58,913 | INFO     | traces error code: 0
[2025-10-12 13:11:14] 2025-10-12 11:07:58,914 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 13:11:14] 2025-10-12 11:07:59,051 [wrapper] ==== pilot stdout END ====
[2025-10-12 13:11:14] 2025-10-12 11:07:59,055 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 13:11:14] 2025-10-12 11:07:59,059 [wrapper] pilotpid: 717149
[2025-10-12 13:11:14] 2025-10-12 11:07:59,062 [wrapper] Pilot exit status: 0
[2025-10-12 13:11:14] 2025-10-12 11:07:59,078 [wrapper] pandaids: 6838067303
[2025-10-12 13:11:14] 2025-10-12 11:07:59,246 [wrapper] cleanup supervisor_pilot 1186942 717150
[2025-10-12 13:11:14] 2025-10-12 11:07:59,251 [wrapper] Test setup, not cleaning
[2025-10-12 13:11:14] 2025-10-12 11:07:59,255 [wrapper] apfmon messages muted
[2025-10-12 13:11:14] 2025-10-12 11:07:59,259 [wrapper] ==== wrapper stdout END ====
[2025-10-12 13:11:14] 2025-10-12 11:07:59,262 [wrapper] ==== wrapper stderr END ====
[2025-10-12 13:11:14]  *** Error codes and diagnostics ***
[2025-10-12 13:11:14]     "exeErrorCode": 0,
[2025-10-12 13:11:14]     "exeErrorDiag": "",
[2025-10-12 13:11:14]     "pilotErrorCode": 0,
[2025-10-12 13:11:14]     "pilotErrorDiag": "",
[2025-10-12 13:11:14]  *** Listing of results directory ***
[2025-10-12 13:11:14] total 421860
[2025-10-12 13:11:14] -rw-r--r-- 1 boinc boinc    557409 Oct 11 05:42 pilot3.tar.gz
[2025-10-12 13:11:14] -rw-r--r-- 1 boinc boinc      5112 Oct 11 06:10 queuedata.json
[2025-10-12 13:11:14] -rwx------ 1 boinc boinc     36292 Oct 11 06:10 runpilot2-wrapper.sh
[2025-10-12 13:11:14] -rw-r--r-- 1 boinc boinc       100 Oct 12 10:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 13:11:14] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 10:22 run_atlas
[2025-10-12 13:11:14] -rw-r--r-- 1 boinc boinc       105 Oct 12 10:22 job.xml
[2025-10-12 13:11:14] -rw-r--r-- 1 boinc boinc      6686 Oct 12 10:22 init_data.xml
[2025-10-12 13:11:14] -rw-r--r-- 2 boinc boinc 219628389 Oct 12 10:22 EVNT.46676267._002052.pool.root.1
[2025-10-12 13:11:14] -rw-r--r-- 2 boinc boinc     15120 Oct 12 10:22 start_atlas.sh
[2025-10-12 13:11:14] drwxrwx--x 2 boinc boinc      4096 Oct 12 10:22 shared
[2025-10-12 13:11:14] -rw-r--r-- 2 boinc boinc    569681 Oct 12 10:22 input.tar.gz
[2025-10-12 13:11:14] -rw-r--r-- 1 boinc boinc         0 Oct 12 10:22 boinc_lockfile
[2025-10-12 13:11:14] -rw-r--r-- 1 boinc boinc      2550 Oct 12 10:22 pandaJob.out
[2025-10-12 13:11:14] -rw------- 1 boinc boinc    975520 Oct 12 10:22 agis_schedconf.cvmfs.json
[2025-10-12 13:11:14] -rw------- 1 boinc boinc   1560580 Oct 12 10:22 agis_ddmendpoints.agis.ALL.json
[2025-10-12 13:11:14] drwx------ 5 boinc boinc      4096 Oct 12 10:22 pilot3
[2025-10-12 13:11:14] -rw------- 1 boinc boinc 205027731 Oct 12 13:06 HITS.46676269._050991.pool.root.1
[2025-10-12 13:11:14] -rw-r--r-- 1 boinc boinc       529 Oct 12 13:06 boinc_task_state.xml
[2025-10-12 13:11:14] -rw------- 1 boinc boinc      1034 Oct 12 13:06 memory_monitor_summary.json
[2025-10-12 13:11:14] -rw------- 1 boinc boinc    327711 Oct 12 13:06 log.46676269._050991.job.log.tgz.1
[2025-10-12 13:11:14] -rw------- 1 boinc boinc      7795 Oct 12 13:06 heartbeat.json
[2025-10-12 13:11:14] -rw------- 1 boinc boinc        95 Oct 12 13:07 pilot_heartbeat.json
[2025-10-12 13:11:14] -rw------- 1 boinc boinc      4834 Oct 12 13:07 pilotlog.txt
[2025-10-12 13:11:14] -rw------- 1 boinc boinc   1379265 Oct 12 13:07 log.46676269._050991.job.log.1
[2025-10-12 13:11:14] -rw------- 1 boinc boinc       357 Oct 12 13:07 output.list
[2025-10-12 13:11:14] -rw-r--r-- 1 boinc boinc       620 Oct 12 13:07 runtime_log
[2025-10-12 13:11:14] -rw------- 1 boinc boinc   1730560 Oct 12 13:07 result.tar.gz
[2025-10-12 13:11:14] -rw-r--r-- 1 boinc boinc      9069 Oct 12 13:07 runtime_log.err
[2025-10-12 13:11:14] -rw------- 1 boinc boinc       664 Oct 12 13:07 5kKLDm86fR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmoMfNDmphYPQn.diag
[2025-10-12 13:11:14] -rw-r--r-- 1 boinc boinc        26 Oct 12 13:10 wrapper_checkpoint.txt
[2025-10-12 13:11:14] -rw-r--r-- 1 boinc boinc      8192 Oct 12 13:11 boinc_mmap_file
[2025-10-12 13:11:14] -rw-r--r-- 1 boinc boinc     20954 Oct 12 13:11 stderr.txt
[2025-10-12 13:11:14] HITS file was successfully produced:
[2025-10-12 13:11:14] -rw------- 1 boinc boinc 205027731 Oct 12 13:06 shared/HITS.pool.root.1
[2025-10-12 13:11:14]  *** Contents of shared directory: ***
[2025-10-12 13:11:14] total 416984
[2025-10-12 13:11:14] -rw-r--r-- 2 boinc boinc 219628389 Oct 12 10:22 ATLAS.root_0
[2025-10-12 13:11:14] -rw-r--r-- 2 boinc boinc     15120 Oct 12 10:22 start_atlas.sh
[2025-10-12 13:11:14] -rw-r--r-- 2 boinc boinc    569681 Oct 12 10:22 input.tar.gz
[2025-10-12 13:11:14] -rw------- 1 boinc boinc 205027731 Oct 12 13:06 HITS.pool.root.1
[2025-10-12 13:11:14] -rw------- 1 boinc boinc   1730560 Oct 12 13:07 result.tar.gz
13:11:15 (711178): run_atlas exited; CPU time 38619.202807
13:11:15 (711178): called boinc_finish(0)

</stderr_txt>
]]>

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