Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:08:05 (19976): wrapper (7.7.26015): starting
20:08:05 (19976): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 20:08:05] Arguments: --nthreads 4
[2025-10-12 20:08:05] Threads: 4
[2025-10-12 20:08:05] Checking for CVMFS
[2025-10-12 20:08:05] No cvmfs_config command found, will try listing directly
[2025-10-12 20:08:05] CVMFS is ok
[2025-10-12 20:08:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 20:08:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 20:08:05] Further information can be found at the LHC@home message board.
[2025-10-12 20:08:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:08:05] Checking for apptainer binary...
[2025-10-12 20:08:05] which: no apptainer in ((null))
[2025-10-12 20:08:05] apptainer is not installed, using version from CVMFS
[2025-10-12 20:08:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:08:06] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot112/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2025-10-12 20:08:06] apptainer works
[2025-10-12 20:08:06] Set ATHENA_PROC_NUMBER=4
[2025-10-12 20:08:06] Set ATHENA_CORE_NUMBER=4
[2025-10-12 20:08:06] Starting ATLAS job with PandaID=6838067387
[2025-10-12 20:08:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot112/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:07:30]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:07:30] 2025-10-12 20:44:03,299 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 23:07:30] 2025-10-12 20:44:03,299 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 23:07:30] 2025-10-12 20:44:03,302 | INFO     | fitting pss+swap vs Time
[2025-10-12 23:07:30] 2025-10-12 20:44:03,302 | INFO     | sum of square deviations: 1110539892.0
[2025-10-12 23:07:30] 2025-10-12 20:44:03,303 | INFO     | sum of deviations: 6737242844.000002
[2025-10-12 23:07:30] 2025-10-12 20:44:03,303 | INFO     | mean x: 1760297171.0
[2025-10-12 23:07:30] 2025-10-12 20:44:03,303 | INFO     | mean y: 2290433.640522876
[2025-10-12 23:07:30] 2025-10-12 20:44:03,303 | INFO     | -- intersect: -10676794220.64869
[2025-10-12 23:07:30] 2025-10-12 20:44:03,303 | INFO     | intersect: -10676794220.64869
[2025-10-12 23:07:30] 2025-10-12 20:44:03,303 | INFO     | chi2: 2.0096450848273353
[2025-10-12 23:07:30] 2025-10-12 20:44:03,304 | INFO     | sum of square deviations: 1005179777.0
[2025-10-12 23:07:30] 2025-10-12 20:44:03,304 | INFO     | sum of deviations: 15303058898.0
[2025-10-12 23:07:30] 2025-10-12 20:44:03,305 | INFO     | mean x: 1760297018.5
[2025-10-12 23:07:30] 2025-10-12 20:44:03,305 | INFO     | mean y: 2302477.0945945946
[2025-10-12 23:07:30] 2025-10-12 20:44:03,305 | INFO     | -- intersect: -26796813032.84597
[2025-10-12 23:07:30] 2025-10-12 20:44:03,305 | INFO     | intersect: -26796813032.84597
[2025-10-12 23:07:30] 2025-10-12 20:44:03,305 | INFO     | chi2: 1.2642842450892373
[2025-10-12 23:07:30] 2025-10-12 20:44:03,305 | INFO     | current chi2=1.2642842450892373 (change=37.08917785361777 %)
[2025-10-12 23:07:30] 2025-10-12 20:44:03,305 | INFO     | sum of square deviations: 906703512.0
[2025-10-12 23:07:30] 2025-10-12 20:44:03,306 | INFO     | sum of deviations: 14807751159.0
[2025-10-12 23:07:30] 2025-10-12 20:44:03,306 | INFO     | mean x: 1760296866.0
[2025-10-12 23:07:30] 2025-10-12 20:44:03,306 | INFO     | mean y: 2301709.916083916
[2025-10-12 23:07:30] 2025-10-12 20:44:03,306 | INFO     | -- intersect: -28745836587.46328
[2025-10-12 23:07:30] 2025-10-12 20:44:03,306 | INFO     | intersect: -28745836587.46328
[2025-10-12 23:07:30] 2025-10-12 20:44:03,306 | INFO     | chi2: 1.2654948498945278
[2025-10-12 23:07:30] 2025-10-12 20:44:03,306 | INFO     | current chi2=1.2654948498945278 (change=-0.09575416366949989 %)
[2025-10-12 23:07:30] 2025-10-12 20:44:03,307 | INFO     | right removable region: 142
[2025-10-12 23:07:30] 2025-10-12 20:44:03,307 | INFO     | sum of square deviations: 1005179777.0
[2025-10-12 23:07:30] 2025-10-12 20:44:03,307 | INFO     | sum of deviations: -11583311106.0
[2025-10-12 23:07:30] 2025-10-12 20:44:03,308 | INFO     | mean x: 1760297323.5
[2025-10-12 23:07:30] 2025-10-12 20:44:03,308 | INFO     | mean y: 2316502.1756756757
[2025-10-12 23:07:30] 2025-10-12 20:44:03,308 | INFO     | -- intersect: 20287316264.123356
[2025-10-12 23:07:30] 2025-10-12 20:44:03,308 | INFO     | intersect: 20287316264.123356
[2025-10-12 23:07:30] 2025-10-12 20:44:03,308 | INFO     | chi2: 0.773133640750414
[2025-10-12 23:07:30] 2025-10-12 20:44:03,308 | INFO     | current chi2=0.773133640750414 (change=61.52884673082261 %)
[2025-10-12 23:07:30] 2025-10-12 20:44:03,308 | INFO     | sum of square deviations: 906703512.0
[2025-10-12 23:07:30] 2025-10-12 20:44:03,309 | INFO     | sum of deviations: -11309059437.0
[2025-10-12 23:07:30] 2025-10-12 20:44:03,309 | INFO     | mean x: 1760297476.0
[2025-10-12 23:07:30] 2025-10-12 20:44:03,309 | INFO     | mean y: 2316067.5384615385
[2025-10-12 23:07:30] 2025-10-12 20:44:03,309 | INFO     | -- intersect: 21958014396.062283
[2025-10-12 23:07:30] 2025-10-12 20:44:03,309 | INFO     | intersect: 21958014396.062283
[2025-10-12 23:07:30] 2025-10-12 20:44:03,309 | INFO     | chi2: 0.7732323466356597
[2025-10-12 23:07:30] 2025-10-12 20:44:03,310 | INFO     | current chi2=0.7732323466356597 (change=-0.012766988789910373 %)
[2025-10-12 23:07:30] 2025-10-12 20:44:03,310 | INFO     | left removable region: 20
[2025-10-12 23:07:30] 2025-10-12 20:44:03,310 | INFO     | sum of square deviations: 563026370.5
[2025-10-12 23:07:30] 2025-10-12 20:44:03,310 | INFO     | sum of deviations: -1384710736.0000007
[2025-10-12 23:07:30] 2025-10-12 20:44:03,310 | INFO     | mean x: 1760297445.5
[2025-10-12 23:07:30] 2025-10-12 20:44:03,310 | INFO     | mean y: 2327702.081967213
[2025-10-12 23:07:30] 2025-10-12 20:44:03,311 | INFO     | -- intersect: 4331614746.261767
[2025-10-12 23:07:30] 2025-10-12 20:44:03,311 | INFO     | intersect: 4331614746.261767
[2025-10-12 23:07:30] 2025-10-12 20:44:03,311 | INFO     | chi2: 0.0034466711539250326
[2025-10-12 23:07:30] 2025-10-12 20:44:03,311 | INFO     | -- intersect: 4331614746.261767
[2025-10-12 23:07:30] 2025-10-12 20:44:03,311 | INFO     | current memory leak: -2.46 B/s (using 122 data points, chi2=0.00)
[2025-10-12 23:07:30] 2025-10-12 20:44:03,311 | INFO     | could have reported an average CPU frequency of 2745 MHz (9 samples)
[2025-10-12 23:07:30] 2025-10-12 20:44:03,311 | INFO     | ..............................
[2025-10-12 23:07:30] 2025-10-12 20:44:03,311 | INFO     | . Timing measurements:
[2025-10-12 23:07:30] 2025-10-12 20:44:03,312 | INFO     | . get job = 0 s
[2025-10-12 23:07:30] 2025-10-12 20:44:03,312 | INFO     | . initial setup = 1 s
[2025-10-12 23:07:30] 2025-10-12 20:44:03,312 | INFO     | . payload setup = 8 s
[2025-10-12 23:07:30] 2025-10-12 20:44:03,312 | INFO     | . stage-in = 0 s
[2025-10-12 23:07:30] 2025-10-12 20:44:03,312 | INFO     | . payload execution = 9301 s
[2025-10-12 23:07:30] 2025-10-12 20:44:03,312 | INFO     | . stage-out = 0 s
[2025-10-12 23:07:30] 2025-10-12 20:44:03,312 | INFO     | . log creation = 0 s
[2025-10-12 23:07:30] 2025-10-12 20:44:03,312 | INFO     | ..............................
[2025-10-12 23:07:30] 2025-10-12 20:44:03,394 | INFO     | 
[2025-10-12 23:07:30] 2025-10-12 20:44:03,395 | INFO     | job summary report
[2025-10-12 23:07:30] 2025-10-12 20:44:03,395 | INFO     | --------------------------------------------------
[2025-10-12 23:07:30] 2025-10-12 20:44:03,395 | INFO     | PanDA job id: 6838067387
[2025-10-12 23:07:30] 2025-10-12 20:44:03,395 | INFO     | task id: 46676269
[2025-10-12 23:07:30] 2025-10-12 20:44:03,395 | INFO     | errors: (none)
[2025-10-12 23:07:30] 2025-10-12 20:44:03,395 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:07:30] 2025-10-12 20:44:03,395 | INFO     | pilot state: finished 
[2025-10-12 23:07:30] 2025-10-12 20:44:03,395 | INFO     | transexitcode: 0
[2025-10-12 23:07:30] 2025-10-12 20:44:03,395 | INFO     | exeerrorcode: 0
[2025-10-12 23:07:30] 2025-10-12 20:44:03,396 | INFO     | exeerrordiag: 
[2025-10-12 23:07:30] 2025-10-12 20:44:03,396 | INFO     | exitcode: 0
[2025-10-12 23:07:30] 2025-10-12 20:44:03,396 | INFO     | exitmsg: OK
[2025-10-12 23:07:30] 2025-10-12 20:44:03,396 | INFO     | cpuconsumptiontime: 35457 s
[2025-10-12 23:07:30] 2025-10-12 20:44:03,396 | INFO     | nevents: 400
[2025-10-12 23:07:30] 2025-10-12 20:44:03,396 | INFO     | neventsw: 0
[2025-10-12 23:07:30] 2025-10-12 20:44:03,396 | INFO     | pid: 105597
[2025-10-12 23:07:30] 2025-10-12 20:44:03,396 | INFO     | pgrp: 105597
[2025-10-12 23:07:30] 2025-10-12 20:44:03,396 | INFO     | corecount: 4
[2025-10-12 23:07:30] 2025-10-12 20:44:03,396 | INFO     | event service: False
[2025-10-12 23:07:30] 2025-10-12 20:44:03,396 | INFO     | sizes: {0: 2348030, 1: 2348898, 8: 2349160, 12: 2349188, 9313: 2377855, 9314: 2386877, 9317: 2387061, 9325: 2387319}
[2025-10-12 23:07:30] 2025-10-12 20:44:03,396 | INFO     | --------------------------------------------------
[2025-10-12 23:07:30] 2025-10-12 20:44:03,396 | INFO     | 
[2025-10-12 23:07:30] 2025-10-12 20:44:03,397 | INFO     | executing command: ls -lF /scratch/boinc/var/slot112/slots/0
[2025-10-12 23:07:30] 2025-10-12 20:44:03,426 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:07:30] 2025-10-12 20:44:03,426 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:07:30] 2025-10-12 20:44:03,426 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:07:30] 2025-10-12 20:44:03,426 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:07:30] 2025-10-12 20:44:03,426 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:07:30] 2025-10-12 20:44:03,427 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:07:30] 2025-10-12 20:44:03,427 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:07:30] 2025-10-12 20:44:03,427 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:07:30] 2025-10-12 20:44:03,427 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:07:30] 2025-10-12 20:44:03,427 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:07:30] 2025-10-12 20:44:03,427 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:07:30] 2025-10-12 20:44:03,427 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:07:30] 2025-10-12 20:44:03,427 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:07:30] 2025-10-12 20:44:03,427 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:07:30] 2025-10-12 20:44:03,427 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:07:30] 2025-10-12 20:44:03,428 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:07:30] 2025-10-12 20:44:03,428 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:07:30] 2025-10-12 20:44:03,428 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:07:30] 2025-10-12 20:44:03,428 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:07:30] 2025-10-12 20:44:03,428 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:07:30] 2025-10-12 20:44:03,428 | INFO     | job 6838067387 has completed (purged errors)
[2025-10-12 23:07:30] 2025-10-12 20:44:03,428 | INFO     | overall cleanup function is called
[2025-10-12 23:07:30] 2025-10-12 20:44:04,437 | INFO     | --- collectZombieJob: --- 10, [105597]
[2025-10-12 23:07:30] 2025-10-12 20:44:04,438 | INFO     | zombie collector waiting for pid 105597
[2025-10-12 23:07:30] 2025-10-12 20:44:04,438 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:07:30] 2025-10-12 20:44:04,438 | INFO     | collected zombie processes
[2025-10-12 23:07:30] 2025-10-12 20:44:04,438 | INFO     | will attempt to kill all subprocesses of pid=105597
[2025-10-12 23:07:30] 2025-10-12 20:44:05,065 | INFO     | process IDs to be killed: [105597] (in reverse order)
[2025-10-12 23:07:30] 2025-10-12 20:44:05,288 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:07:30] 2025-10-12 20:44:05,288 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:07:30] 2025-10-12 20:44:05,319 | INFO     | did not find any defunct processes belonging to 105597
[2025-10-12 23:07:30] 2025-10-12 20:44:05,347 | INFO     | did not find any defunct processes belonging to 105597
[2025-10-12 23:07:30] 2025-10-12 20:44:05,348 | INFO     | ready for new job
[2025-10-12 23:07:30] 2025-10-12 20:44:05,348 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:07:30] 2025-10-12 20:44:05,350 | INFO     | ***************************************
[2025-10-12 23:07:30] 2025-10-12 20:44:05,351 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:07:30] 2025-10-12 20:44:05,351 | INFO     | ***************************************
[2025-10-12 23:07:30] 2025-10-12 20:44:05,351 | INFO     | 
[2025-10-12 23:07:30] 2025-10-12 20:44:05,359 | INFO     | architecture information:
[2025-10-12 23:07:30] 2025-10-12 20:44:05,359 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:07:30] 2025-10-12 20:44:05,384 | INFO     | cat /etc/os-release:
[2025-10-12 23:07:30] NAME="CentOS Linux"
[2025-10-12 23:07:30] VERSION="7 (Core)"
[2025-10-12 23:07:30] ID="centos"
[2025-10-12 23:07:30] ID_LIKE="rhel fedora"
[2025-10-12 23:07:30] VERSION_ID="7"
[2025-10-12 23:07:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:07:30] ANSI_COLOR="0;31"
[2025-10-12 23:07:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:07:30] HOME_URL="https://www.centos.org/"
[2025-10-12 23:07:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:07:30] 
[2025-10-12 23:07:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:07:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:07:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:07:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:07:30] 
[2025-10-12 23:07:30] 2025-10-12 20:44:05,384 | INFO     | ***************************************
[2025-10-12 23:07:30] 2025-10-12 20:44:05,888 | INFO     | executing command: df -mP /scratch/boinc/var/slot112/slots/0
[2025-10-12 23:07:30] 2025-10-12 20:44:05,912 | INFO     | sufficient remaining disk space (3336115847168 B)
[2025-10-12 23:07:30] 2025-10-12 20:44:05,912 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:07:30] 2025-10-12 20:44:05,912 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:07:30] 2025-10-12 20:44:05,912 | INFO     | update_server=False
[2025-10-12 23:07:30] 2025-10-12 20:44:05,913 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:07:30] 2025-10-12 20:44:05,913 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:07:30] 2025-10-12 20:44:06,096 | INFO     | all data control threads have been joined
[2025-10-12 23:07:30] 2025-10-12 20:44:06,112 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:07:30] 2025-10-12 20:44:06,460 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:07:30] 2025-10-12 20:44:06,460 | INFO     | aborting loop
[2025-10-12 23:07:30] 2025-10-12 20:44:06,815 | INFO     | all payload control threads have been joined
[2025-10-12 23:07:30] 2025-10-12 20:44:06,916 | INFO     | all job control threads have been joined
[2025-10-12 23:07:30] 2025-10-12 20:44:06,918 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:07:30] 2025-10-12 20:44:07,015 | INFO     | [job] validate thread has finished
[2025-10-12 23:07:30] 2025-10-12 20:44:07,024 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:07:30] 2025-10-12 20:44:07,066 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:07:30] 2025-10-12 20:44:07,101 | INFO     | [data] control thread has finished
[2025-10-12 23:07:30] 2025-10-12 20:44:07,355 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:07:30] 2025-10-12 20:44:07,464 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:07:30] 2025-10-12 20:44:07,465 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:07:30] 2025-10-12 20:44:07,756 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:07:30] 2025-10-12 20:44:07,818 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:07:30] 2025-10-12 20:44:07,821 | INFO     | [payload] control thread has finished
[2025-10-12 23:07:30] 2025-10-12 20:44:07,917 | INFO     | [job] control thread has finished
[2025-10-12 23:07:30] 2025-10-12 20:44:07,919 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:07:30] 2025-10-12 20:44:08,405 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:07:30] 2025-10-12 20:44:09,411 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:07:30] 2025-10-12 20:44:10,118 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:07:30] 2025-10-12 20:44:16,879 | INFO     | job.realtimelogging is not enabled
[2025-10-12 23:07:30] 2025-10-12 20:44:17,885 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:07:30] 2025-10-12 20:44:34,531 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:07:30] 2025-10-12 20:44:34,813 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22555717465920)>', '<ExcThread(monitor, started 22555406595840)>']
[2025-10-12 23:07:30] 2025-10-12 20:44:35,431 | INFO     | PID=45033 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 23:07:30] 2025-10-12 20:44:35,431 | INFO     | .. there are 6 such processes running
[2025-10-12 23:07:30] 2025-10-12 20:44:35,431 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:07:30] 2025-10-12 20:44:35,431 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:07:30] 2025-10-12 20:44:35,431 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:07:30] 2025-10-12 20:44:35,431 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:07:30] 2025-10-12 20:44:35,431 | INFO     | [monitor] control thread has ended
[2025-10-12 23:07:30] 2025-10-12 20:44:39,838 | INFO     | all workflow threads have been joined
[2025-10-12 23:07:30] 2025-10-12 20:44:39,839 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:07:30] 2025-10-12 20:44:39,839 | INFO     | traces error code: 0
[2025-10-12 23:07:30] 2025-10-12 20:44:39,839 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:07:30] 2025-10-12 20:44:40,020 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:07:30] 2025-10-12 20:44:40,023 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:07:30] 2025-10-12 20:44:40,027 [wrapper] pilotpid: 45033
[2025-10-12 23:07:30] 2025-10-12 20:44:40,031 [wrapper] Pilot exit status: 0
[2025-10-12 23:07:30] 2025-10-12 20:44:40,043 [wrapper] pandaids: 6838067387
[2025-10-12 23:07:30] 2025-10-12 20:44:40,207 [wrapper] cleanup supervisor_pilot  375609 45034
[2025-10-12 23:07:30] 2025-10-12 20:44:40,211 [wrapper] Test setup, not cleaning
[2025-10-12 23:07:30] 2025-10-12 20:44:40,214 [wrapper] apfmon messages muted
[2025-10-12 23:07:30] 2025-10-12 20:44:40,218 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:07:30] 2025-10-12 20:44:40,221 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:07:30]  *** Error codes and diagnostics ***
[2025-10-12 23:07:30]     "exeErrorCode": 0,
[2025-10-12 23:07:30]     "exeErrorDiag": "",
[2025-10-12 23:07:30]     "pilotErrorCode": 0,
[2025-10-12 23:07:30]     "pilotErrorDiag": "",
[2025-10-12 23:07:30]  *** Listing of results directory ***
[2025-10-12 23:07:30] total 411448
[2025-10-12 23:07:30] -rw-r--r-- 1 boinc boinc    557409 Oct 11 05:42 pilot3.tar.gz
[2025-10-12 23:07:30] -rw-r--r-- 1 boinc boinc      5112 Oct 11 06:13 queuedata.json
[2025-10-12 23:07:30] -rwx------ 1 boinc boinc     36292 Oct 11 06:13 runpilot2-wrapper.sh
[2025-10-12 23:07:30] -rw-r--r-- 1 boinc boinc       100 Oct 12 20:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:07:30] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 20:08 run_atlas
[2025-10-12 23:07:30] -rw-r--r-- 1 boinc boinc       105 Oct 12 20:08 job.xml
[2025-10-12 23:07:30] -rw-r--r-- 1 boinc boinc      6688 Oct 12 20:08 init_data.xml
[2025-10-12 23:07:30] -rw-r--r-- 2 boinc boinc 219181494 Oct 12 20:08 EVNT.46676267._002055.pool.root.1
[2025-10-12 23:07:30] -rw-r--r-- 2 boinc boinc     15120 Oct 12 20:08 start_atlas.sh
[2025-10-12 23:07:30] drwxrwx--x 2 boinc boinc      4096 Oct 12 20:08 shared
[2025-10-12 23:07:30] -rw-r--r-- 2 boinc boinc    569679 Oct 12 20:08 input.tar.gz
[2025-10-12 23:07:30] -rw-r--r-- 1 boinc boinc         0 Oct 12 20:08 boinc_lockfile
[2025-10-12 23:07:30] -rw-r--r-- 1 boinc boinc      2551 Oct 12 20:08 pandaJob.out
[2025-10-12 23:07:30] -rw------- 1 boinc boinc    975528 Oct 12 20:08 agis_schedconf.cvmfs.json
[2025-10-12 23:07:30] -rw------- 1 boinc boinc   1560580 Oct 12 20:08 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:07:30] drwx------ 5 boinc boinc      4096 Oct 12 20:08 pilot3
[2025-10-12 23:07:30] -rw------- 1 boinc boinc 194935243 Oct 12 22:43 HITS.46676269._051075.pool.root.1
[2025-10-12 23:07:30] -rw-r--r-- 1 boinc boinc       528 Oct 12 22:43 boinc_task_state.xml
[2025-10-12 23:07:30] -rw------- 1 boinc boinc        95 Oct 12 22:43 pilot_heartbeat.json
[2025-10-12 23:07:30] -rw------- 1 boinc boinc      1023 Oct 12 22:43 memory_monitor_summary.json
[2025-10-12 23:07:30] -rw------- 1 boinc boinc    331896 Oct 12 22:43 log.46676269._051075.job.log.tgz.1
[2025-10-12 23:07:30] -rw------- 1 boinc boinc      7779 Oct 12 22:44 heartbeat.json
[2025-10-12 23:07:30] -rw------- 1 boinc boinc      4905 Oct 12 22:44 pilotlog.txt
[2025-10-12 23:07:30] -rw------- 1 boinc boinc   1313208 Oct 12 22:44 log.46676269._051075.job.log.1
[2025-10-12 23:07:30] -rw------- 1 boinc boinc       357 Oct 12 22:44 output.list
[2025-10-12 23:07:30] -rw-r--r-- 1 boinc boinc       620 Oct 12 22:44 runtime_log
[2025-10-12 23:07:30] -rw------- 1 boinc boinc   1669120 Oct 12 22:44 result.tar.gz
[2025-10-12 23:07:30] -rw-r--r-- 1 boinc boinc      9084 Oct 12 22:44 runtime_log.err
[2025-10-12 23:07:30] -rw------- 1 boinc boinc       662 Oct 12 22:44 gzINDmFAgR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmUCRMDm8EGk0n.diag
[2025-10-12 23:07:30] -rw-r--r-- 1 boinc boinc        26 Oct 12 23:07 wrapper_checkpoint.txt
[2025-10-12 23:07:30] -rw-r--r-- 1 boinc boinc      8192 Oct 12 23:07 boinc_mmap_file
[2025-10-12 23:07:30] -rw-r--r-- 1 boinc boinc     20651 Oct 12 23:07 stderr.txt
[2025-10-12 23:07:30] HITS file was successfully produced:
[2025-10-12 23:07:30] -rw------- 1 boinc boinc 194935243 Oct 12 22:43 shared/HITS.pool.root.1
[2025-10-12 23:07:30]  *** Contents of shared directory: ***
[2025-10-12 23:07:30] total 406632
[2025-10-12 23:07:30] -rw-r--r-- 2 boinc boinc 219181494 Oct 12 20:08 ATLAS.root_0
[2025-10-12 23:07:30] -rw-r--r-- 2 boinc boinc     15120 Oct 12 20:08 start_atlas.sh
[2025-10-12 23:07:30] -rw-r--r-- 2 boinc boinc    569679 Oct 12 20:08 input.tar.gz
[2025-10-12 23:07:30] -rw------- 1 boinc boinc 194935243 Oct 12 22:43 HITS.pool.root.1
[2025-10-12 23:07:30] -rw------- 1 boinc boinc   1669120 Oct 12 22:44 result.tar.gz
23:07:31 (19976): run_atlas exited; CPU time 36029.685130
23:07:31 (19976): called boinc_finish(0)

</stderr_txt>
]]>

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